Carg12462 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12462
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	UPF0098 protein
Location	Carg_Chr14: 204812 .. 206146 (-)
RNA-Seq Expression	Carg12462
Synteny	Carg12462

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGCAGCAGACAAGAAGCTAAGGACCATGGCCGACAGCGAGGAGTTCAGGCTGGCGTCTTCAGCAATAGTCCACGAAGGAAGGTTGCCAAGAAAGTACACATCAGAAGGCCAAGGGGCGCAGAAGAATAGATCTCCGCCGTTGGAATGGTACAACGTGCCTCAAGGGACCAAGACCCTCGCACTTGTGGTGCAGGACATCGACGCGCCGAACCCTGACGGCCCTATTGTGCCGTGGACTGTTTGGGTGGTTGTGAACATACCGCCAAGCTTGAAGGGCCTTCCCGAAGATTTCTCAGGGAACCAACAGGGGCTCGGTAAGGATTATGCGTCTATCCAAGAGGGCAACAACGACGATAAAATCCCTGGGTGGCGTGTACCCACTTTGCCCTCACTTGGCCACCGCTTTGAGTTCAAGCTCTACGCTTTGGACGATGAGATGAACCTCGGCAATAAGGTCAATTATAGCCCAGGAATATTAATATTAAAAATTAAAATTGATGAACTTCTAATCATTTCCTTTCCATCTTTTTGGATAATGATTCCGTGCCTTGACTTGCAGCCGACAAAGGAGAAGCTGTTAGACGAAATAGAAGGGCACGTGCTGGGAGAAGCTGTATTAATGGCGATCTTCTGATCATGGGACGGGACATTCAACTTTTTGTACTCTTTTTTGTCACTTTCTTATCTGAAATGGAGCCTCAGGGGTGAGGAGAAAACTCTGTATTTTGTGCATTAAATCTTCTTAATAACAGAGGAATGTCACCACACCAGGAATAAACTTCGGCACAAAAATTAAGCCACTAAAATTATGAACATTCAAGACGCACTCGAATCAAACCAAAGCAGGCTTTAAAAATGTTTACAACTCGATGATTACTCCTCTAGCACCATGGATATAGGGCGAGGCCCTTCCTTCTTCCACATTGTTCCCCGCAGTACCGTGCCTTCTGGGATCGAATTTCTCGCCGTCGCCCCAAAGAGCATAAGCCTCCTCGCCGTGGACGGCGTCATCGCCGATCATAAGTTCCTCGTCAGGCATCCTCAATGGCATAAACAGCCGAATAAAGAGGAGTATTATGGTCGTAGACACTACGTTCCATCCTATAATAAACGCGGATCCGGCCAGTTGTTTCAGGAATTGAACGCCGCCGTTTTTGCCGTAAAAGGCTCCGCGTGTGCCGGTTATCGGTAGGTATAGATCGCATAGAGTGGGCTCGGCTAAAAGCCCTGTTAAAAGCCCGCCCATCATTCCCGCCACCGCGTGCGTGTGAAATACGCCGAGCGTGTCGTCAGCCTGTTGCACGTGATTTGACAAAATTTAAAATAAAATA

mRNA sequence

ATGACGCAGCAGACAAGAAGCTAAGGACCATGGCCGACAGCGAGGAGTTCAGGCTGGCGTCTTCAGCAATAGTCCACGAAGGAAGGTTGCCAAGAAAGTACACATCAGAAGGCCAAGGGGCGCAGAAGAATAGATCTCCGCCGTTGGAATGGTACAACGTGCCTCAAGGGACCAAGACCCTCGCACTTGTGGTGCAGGACATCGACGCGCCGAACCCTGACGGCCCTATTGTGCCGTGGACTGTTTGGGTGGTTGTGAACATACCGCCAAGCTTGAAGGGCCTTCCCGAAGATTTCTCAGGGAACCAACAGGGGCTCGGTAAGGATTATGCGTCTATCCAAGAGGGCAACAACGACGATAAAATCCCTGGGTGGCGTGTACCCACTTTGCCCTCACTTGGCCACCGCTTTGAGTTCAAGCTCTACGCTTTGGACGATGAGATGAACCTCGGCAATAAGCCGACAAAGGAGAAGCTGTTAGACGAAATAGAAGGGCACGTGCTGGGAGAAGCTGTATTAATGGCGATCTTCTGATCATGGGACGGGACATTCAACTTTTTGTACTCTTTTTTGTCACTTTCTTATCTGAAATGGAGCCTCAGGGGTGAGGAGAAAACTCTGTATTTTGTGCATTAAATCTTCTTAATAACAGAGGAATGTCACCACACCAGGAATAAACTTCGGCACAAAAATTAAGCCACTAAAATTATGAACATTCAAGACGCACTCGAATCAAACCAAAGCAGGCTTTAAAAATGTTTACAACTCGATGATTACTCCTCTAGCACCATGGATATAGGGCGAGGCCCTTCCTTCTTCCACATTGTTCCCCGCAGTACCGTGCCTTCTGGGATCGAATTTCTCGCCGTCGCCCCAAAGAGCATAAGCCTCCTCGCCGTGGACGGCGTCATCGCCGATCATAAGTTCCTCGTCAGGCATCCTCAATGGCATAAACAGCCGAATAAAGAGGAGTATTATGGTCGTAGACACTACGTTCCATCCTATAATAAACGCGGATCCGGCCAGTTGTTTCAGGAATTGAACGCCGCCGTTTTTGCCGTAAAAGGCTCCGCGTGTGCCGGTTATCGGTAGGTATAGATCGCATAGAGTGGGCTCGGCTAAAAGCCCTGTTAAAAGCCCGCCCATCATTCCCGCCACCGCGTGCGTGTGAAATACGCCGAGCGTGTCGTCAGCCTGTTGCACGTGATTTGACAAAATTTAAAATAAAATA

Coding sequence (CDS)

ATGGCCGACAGCGAGGAGTTCAGGCTGGCGTCTTCAGCAATAGTCCACGAAGGAAGGTTGCCAAGAAAGTACACATCAGAAGGCCAAGGGGCGCAGAAGAATAGATCTCCGCCGTTGGAATGGTACAACGTGCCTCAAGGGACCAAGACCCTCGCACTTGTGGTGCAGGACATCGACGCGCCGAACCCTGACGGCCCTATTGTGCCGTGGACTGTTTGGGTGGTTGTGAACATACCGCCAAGCTTGAAGGGCCTTCCCGAAGATTTCTCAGGGAACCAACAGGGGCTCGGTAAGGATTATGCGTCTATCCAAGAGGGCAACAACGACGATAAAATCCCTGGGTGGCGTGTACCCACTTTGCCCTCACTTGGCCACCGCTTTGAGTTCAAGCTCTACGCTTTGGACGATGAGATGAACCTCGGCAATAAGCCGACAAAGGAGAAGCTGTTAGACGAAATAGAAGGGCACGTGCTGGGAGAAGCTGTATTAATGGCGATCTTCTGA

Protein sequence

MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDAPNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTLPSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF

Homology

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BLAST of Carg12462 vs. NCBI nr
Match: XP_022934330.1 (uncharacterized protein LOC111441527 [Cucurbita moschata] >KAG7017210.1 hypothetical protein SDJN02_19072 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349.0 bits (894), Expect = 2.3e-92
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60
           MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA
Sbjct: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60

Query: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120
           PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL
Sbjct: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120

Query: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF
Sbjct: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 167

[Close]

BLAST of Carg12462 vs. NCBI nr
Match: XP_023529183.1 (uncharacterized protein LOC111791902 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.1 bits (884), Expect = 3.3e-91
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60
           MADSEEFRLASSAI HEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA
Sbjct: 1   MADSEEFRLASSAIDHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60

Query: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120
           PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYA+IQEGNNDDKIPGWRVPTL
Sbjct: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYAAIQEGNNDDKIPGWRVPTL 120

Query: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF
Sbjct: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 167

[Close]

BLAST of Carg12462 vs. NCBI nr
Match: KAG6580458.1 (hypothetical protein SDJN03_20460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343.6 bits (880), Expect = 9.7e-91
Identity = 165/167 (98.80%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60
           MA SEEFRLASSAI HEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA
Sbjct: 1   MAGSEEFRLASSAIDHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60

Query: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120
           PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL
Sbjct: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120

Query: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF
Sbjct: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 167

[Close]

BLAST of Carg12462 vs. NCBI nr
Match: XP_022982617.1 (uncharacterized protein LOC111481441 [Cucurbita maxima])

HSP 1 Score: 338.2 bits (866), Expect = 4.1e-89
Identity = 161/167 (96.41%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60
           MADS+EFRLASSAI HEGRLPRKYTSEGQGAQKN+SPPLEWYNVPQGTKTLALVVQDIDA
Sbjct: 1   MADSDEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNVPQGTKTLALVVQDIDA 60

Query: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120
           PNPD PIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYA+IQEGNNDDKIPGWRVPTL
Sbjct: 61  PNPDRPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYAAIQEGNNDDKIPGWRVPTL 120

Query: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           PSLGHRFEFKLYALDDEMNLGNKP+KEKLLDEIEGHVLGEAVLMAIF
Sbjct: 121 PSLGHRFEFKLYALDDEMNLGNKPSKEKLLDEIEGHVLGEAVLMAIF 167

[Close]

BLAST of Carg12462 vs. NCBI nr
Match: XP_038904153.1 (UPF0098 protein TC_0109 [Benincasa hispida])

HSP 1 Score: 312.8 bits (800), Expect = 1.8e-81
Identity = 147/167 (88.02%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60
           MADS  FRLASSAI HEGRLPRKYTSEGQGAQKN+SPPLEWYN+P+GTKTLALVVQDIDA
Sbjct: 1   MADSGVFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60

Query: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120
           P+P GPIVPWTVWVVVNIPP+LKGLPEDFSGNQQGLG DYA+IQEGNND+K+PGWR PTL
Sbjct: 61  PDPSGPIVPWTVWVVVNIPPTLKGLPEDFSGNQQGLGGDYAAIQEGNNDEKVPGWRAPTL 120

Query: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           PS GHRFEFKLYALDD +NLGNK TKEKLLD IEGHVLGEAVLMA+F
Sbjct: 121 PSHGHRFEFKLYALDDHLNLGNKVTKEKLLDAIEGHVLGEAVLMAVF 167

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BLAST of Carg12462 vs. ExPASy Swiss-Prot
Match: O26373 (UPF0098 protein MTH_273 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=MTH_273 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.1e-24
Identity = 66/159 (41.51%), Postives = 88/159 (55.35%), Query Frame = 0


Query: 9   LASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDAPNPDGPIV 68
           L + A    GR+P +YT +G+    N SPPL W  VP   K+LAL+  D     PD P  
Sbjct: 3   LKTHAFNDRGRIPSRYTCDGE----NISPPLSWDGVPGEAKSLALICDD-----PDAPSK 62

Query: 69  PWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTLPSLGHRFE 128
            WT WV+ NIPP   GL E    N    G+      +G ND    G+R P  PS  HR+ 
Sbjct: 63  VWTHWVIFNIPPDSTGLEE----NVPDAGRLPDGSVQGYNDSGTLGYRGPCPPSGVHRYF 122

Query: 129 FKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           F+LYALD  ++L    +KE +L+ +EGHVLGEA L+ ++
Sbjct: 123 FRLYALDTVLDLEPGASKEDVLEAMEGHVLGEAKLIGLY 148

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BLAST of Carg12462 vs. ExPASy Swiss-Prot
Match: Q9PLJ0 (UPF0098 protein TC_0109 OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=TC_0109 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15
Identity = 54/160 (33.75%), Postives = 80/160 (50.00%), Query Frame = 0


Query: 8   RLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDAPNPDGPI 67
           +L S A  +   +P+KY+ +G G     SPPL + ++P   K+LAL+V+D D P      
Sbjct: 2   QLTSQAFSYGRPIPKKYSCQGVGI----SPPLSFSDIPSEAKSLALIVEDPDVPANVRED 61

Query: 68  VPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTLPSLGHRF 127
             W  W+V N+ P +  L E         G    ++Q  N   +I G+  P  P   HR+
Sbjct: 62  GLWIHWIVYNLSPIVSNLAE---------GAQIFAVQGINTAGEI-GYCPPCPPDAKHRY 121

Query: 128 EFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
            F  YALD  +      TKE+LL+ +EGH+L  A LM  +
Sbjct: 122 YFYAYALDVVLPEEEGVTKEQLLEAMEGHILATAELMGTY 147

[Close]

BLAST of Carg12462 vs. ExPASy Swiss-Prot
Match: O84741 (UPF0098 protein CT_736 OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=272561 GN=CT_736 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-15
Identity = 52/160 (32.50%), Postives = 81/160 (50.62%), Query Frame = 0


Query: 8   RLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDAPNPDGPI 67
           +L S A  +   +P+KY+ +G G     SPPL + +VP+  K+L L+V+D D P      
Sbjct: 2   QLTSQAFSYGRPIPKKYSCQGVGI----SPPLSFSDVPREAKSLVLIVEDPDVPPSVRED 61

Query: 68  VPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTLPSLGHRF 127
             W  W+V N+ P +  L E         G    ++Q  N   +I G+  P  P   HR+
Sbjct: 62  GLWIHWIVYNLSPVVSNLAE---------GAQIFAVQGLNTAGEI-GYCPPCPPDAKHRY 121

Query: 128 EFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
            F  YALD  ++     TKE+LL+ ++GH++  A LM  +
Sbjct: 122 YFYAYALDVVLSDEEGVTKEQLLEAMDGHIIATAELMGTY 147

[Close]

BLAST of Carg12462 vs. ExPASy Swiss-Prot
Match: Q9Z729 (UPF0098 protein CPn_0877/CP_0992/CPj0877/CpB0906 OS=Chlamydia pneumoniae OX=83558 GN=CPn_0877 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.4e-14
Identity = 49/160 (30.63%), Postives = 80/160 (50.00%), Query Frame = 0


Query: 8   RLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDAPNPDGPI 67
           +L S A  +   +P+KYT +G G     SPPL + +VP   ++LAL+V+D D P      
Sbjct: 2   QLLSPAFAYGAPIPKKYTCQGAGI----SPPLTFVDVPGAAQSLALIVEDPDVPKEIRSD 61

Query: 68  VPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTLPSLGHRF 127
             W  W+V N+  ++  L E         G +  ++Q  N   K P +  P  P   HR+
Sbjct: 62  GLWIHWIVYNLSTTITNLAE---------GAEIFAVQGLNTSGK-PVYEGPCPPDKQHRY 121

Query: 128 EFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
            F L+ALD  +      T+++L + +E H++ +A LM  +
Sbjct: 122 FFTLFALDVVLPEEENVTRDQLYEAMEFHIIEQAELMGTY 147

[Close]

BLAST of Carg12462 vs. ExPASy Swiss-Prot
Match: O28575 (UPF0098 protein AF_1698 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) OX=224325 GN=AF_1698 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 46/147 (31.29%), Postives = 79/147 (53.74%), Query Frame = 0


Query: 12  SAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDAPNPDGPIVPWT 71
           SA  + G++P KYT +G+    + SPPL    + +  K+L ++ +D     PD P+  +T
Sbjct: 143 SAFENGGKIPAKYTCDGE----DISPPLYIEGLREDVKSLVIICED-----PDAPMGVFT 202

Query: 72  VWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTLPSLGHRFEFKL 131
            W+  N+ P+ + +PE+    +     D   + +G ND    G+  P  PS  HR+ F++
Sbjct: 203 HWIAWNVEPTSE-IPENVPKTK---FVDEPKMVQGRNDFGKVGYNGPCPPSGEHRYYFRI 262

Query: 132 YALDDEMNLGNKPTKEKLLDEIEGHVL 159
           YA+D    L    ++++LL  IEGH+L
Sbjct: 263 YAID--TLLQGDYSRQELLRAIEGHIL 274

[Close]

BLAST of Carg12462 vs. ExPASy TrEMBL
Match: A0A6J1F7D4 (uncharacterized protein LOC111441527 OS=Cucurbita moschata OX=3662 GN=LOC111441527 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.1e-92
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60
           MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA
Sbjct: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60

Query: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120
           PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL
Sbjct: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120

Query: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF
Sbjct: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 167

[Close]

BLAST of Carg12462 vs. ExPASy TrEMBL
Match: A0A6J1IX32 (uncharacterized protein LOC111481441 OS=Cucurbita maxima OX=3661 GN=LOC111481441 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.0e-89
Identity = 161/167 (96.41%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60
           MADS+EFRLASSAI HEGRLPRKYTSEGQGAQKN+SPPLEWYNVPQGTKTLALVVQDIDA
Sbjct: 1   MADSDEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNVPQGTKTLALVVQDIDA 60

Query: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120
           PNPD PIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYA+IQEGNNDDKIPGWRVPTL
Sbjct: 61  PNPDRPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYAAIQEGNNDDKIPGWRVPTL 120

Query: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           PSLGHRFEFKLYALDDEMNLGNKP+KEKLLDEIEGHVLGEAVLMAIF
Sbjct: 121 PSLGHRFEFKLYALDDEMNLGNKPSKEKLLDEIEGHVLGEAVLMAIF 167

[Close]

BLAST of Carg12462 vs. ExPASy TrEMBL
Match: A0A5A7TL06 (UPF0098 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00550 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.4e-81
Identity = 145/167 (86.83%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60
           M D+ EFRLASSAI HEGRLPRKYTSEGQGAQKN+SPPLEWYN+P+GTKTLALVVQDIDA
Sbjct: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60

Query: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120
           P+P+GPIVPWTVWVVVNIP +LKGLPEDFSGNQQGLG DYA+IQEGNNDDK+PGWR PTL
Sbjct: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120

Query: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           PS GHRFEFKLYALDD +NLGNK TKEKLL+ IEGHVLGEAVLMA+F
Sbjct: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 167

[Close]

BLAST of Carg12462 vs. ExPASy TrEMBL
Match: A0A1S3B537 (UPF0098 protein TC_0109 OS=Cucumis melo OX=3656 GN=LOC103486265 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 4.4e-81
Identity = 145/167 (86.83%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60
           M D+ EFRLASSAI HEGRLPRKYTSEGQGAQKN+SPPLEWYN+P+GTKTLALVVQDIDA
Sbjct: 1   MGDNGEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPEGTKTLALVVQDIDA 60

Query: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120
           P+P+GPIVPWTVWVVVNIP +LKGLPEDFSGNQQGLG DYA+IQEGNNDDK+PGWR PTL
Sbjct: 61  PDPNGPIVPWTVWVVVNIPATLKGLPEDFSGNQQGLGGDYAAIQEGNNDDKVPGWRAPTL 120

Query: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           PS GHRFEFKLYALDD +NLGNK TKEKLL+ IEGHVLGEAVLMA+F
Sbjct: 121 PSHGHRFEFKLYALDDHLNLGNKATKEKLLEAIEGHVLGEAVLMAVF 167

[Close]

BLAST of Carg12462 vs. ExPASy TrEMBL
Match: A0A0A0L9T7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730940 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.7e-80
Identity = 143/167 (85.63%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MADSEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDA 60
           M D+ EFRL SSAI HEGRLPRKYTSEGQGAQKN+SPPLEWYN+P+GTKTLALVVQDIDA
Sbjct: 1   MGDNGEFRLVSSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNLPKGTKTLALVVQDIDA 60

Query: 61  PNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTL 120
           P+P GPIVPWTVWVVVNIPP+LKGLPEDFSGNQQGLG DYA+IQEGNND+K+PGWR PTL
Sbjct: 61  PDPSGPIVPWTVWVVVNIPPTLKGLPEDFSGNQQGLGGDYATIQEGNNDEKVPGWRAPTL 120

Query: 121 PSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAIF 168
           PS GHRFEFKLYALDD +NLGNK TK+KLL+ IEGHVLGEAVLMA+F
Sbjct: 121 PSHGHRFEFKLYALDDHLNLGNKATKDKLLEAIEGHVLGEAVLMAVF 167

[Close]

BLAST of Carg12462 vs. TAIR 10
Match: AT5G01300.1 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 230.7 bits (587), Expect = 8.5e-61
Identity = 108/163 (66.26%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 4   SEEFRLASSAIVHEGRLPRKYTSEGQGAQKNRSPPLEWYNVPQGTKTLALVVQDIDAPNP 63
           SEE RL S  I ++G+LPRKYT  GQG +K+ SPPLEWYNVP+GTKTLALVV+DIDAP+P
Sbjct: 3   SEELRLVSPTIDNDGKLPRKYTMAGQGVKKDISPPLEWYNVPEGTKTLALVVEDIDAPDP 62

Query: 64  DGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYASIQEGNNDDKIPGWRVPTLPSL 123
            GP+VPWTVWVVV+IPP +KGLPE +SGN+         I+EGNND KIPGWR P LPS 
Sbjct: 63  SGPLVPWTVWVVVDIPPEMKGLPEGYSGNED----QTTGIREGNNDHKIPGWRGPLLPSH 122

Query: 124 GHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEAVLMAI 167
           GHRF+FKL+ALDD+  +G+  TKE+LL  IEGHVLGEA+L  +
Sbjct: 123 GHRFQFKLFALDDKPKIGHTVTKERLLIAIEGHVLGEAILTCL 161

[Close]

BLAST of Carg12462 vs. TAIR 10
Match: AT5G01300.2 (PEBP (phosphatidylethanolamine-binding protein) family protein )

HSP 1 Score: 181.8 bits (460), Expect = 4.5e-46
Identity = 84/125 (67.20%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 42  YNVPQGTKTLALVVQDIDAPNPDGPIVPWTVWVVVNIPPSLKGLPEDFSGNQQGLGKDYA 101
           YNVP+GTKTLALVV+DIDAP+P GP+VPWTVWVVV+IPP +KGLPE +SGN+        
Sbjct: 7   YNVPEGTKTLALVVEDIDAPDPSGPLVPWTVWVVVDIPPEMKGLPEGYSGNED----QTT 66

Query: 102 SIQEGNNDDKIPGWRVPTLPSLGHRFEFKLYALDDEMNLGNKPTKEKLLDEIEGHVLGEA 161
            I+EGNND KIPGWR P LPS GHRF+FKL+ALDD+  +G+  TKE+LL  IEGHVLGEA
Sbjct: 67  GIREGNNDHKIPGWRGPLLPSHGHRFQFKLFALDDKPKIGHTVTKERLLIAIEGHVLGEA 126

Query: 162 VLMAI 167
           +L  +
Sbjct: 127 ILTCL 127

The following BLAST results are available for this feature:

BLAST of Carg12462 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934330.1	2.3e-92	100.00	uncharacterized protein LOC111441527 [Cucurbita moschata] >KAG7017210.1 hypothet...	[more]
XP_023529183.1	3.3e-91	98.80	uncharacterized protein LOC111791902 [Cucurbita pepo subsp. pepo]	[more]
KAG6580458.1	9.7e-91	98.80	hypothetical protein SDJN03_20460, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022982617.1	4.1e-89	96.41	uncharacterized protein LOC111481441 [Cucurbita maxima]	[more]
XP_038904153.1	1.8e-81	88.02	UPF0098 protein TC_0109 [Benincasa hispida]	[more]

BLAST of Carg12462 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O26373	2.1e-24	41.51	UPF0098 protein MTH_273 OS=Methanothermobacter thermautotrophicus (strain ATCC 2...	[more]
Q9PLJ0	1.1e-15	33.75	UPF0098 protein TC_0109 OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN...	[more]
O84741	3.1e-15	32.50	UPF0098 protein CT_736 OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=272561 GN=...	[more]
Q9Z729	3.4e-14	30.63	UPF0098 protein CPn_0877/CP_0992/CPj0877/CpB0906 OS=Chlamydia pneumoniae OX=8355...	[more]
O28575	1.6e-11	31.29	UPF0098 protein AF_1698 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / D...	[more]

BLAST of Carg12462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7D4	1.1e-92	100.00	uncharacterized protein LOC111441527 OS=Cucurbita moschata OX=3662 GN=LOC1114415...	[more]
A0A6J1IX32	2.0e-89	96.41	uncharacterized protein LOC111481441 OS=Cucurbita maxima OX=3661 GN=LOC111481441...	[more]
A0A5A7TL06	4.4e-81	86.83	UPF0098 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0055...	[more]
A0A1S3B537	4.4e-81	86.83	UPF0098 protein TC_0109 OS=Cucumis melo OX=3656 GN=LOC103486265 PE=4 SV=1	[more]
A0A0A0L9T7	1.7e-80	85.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730940 PE=4 SV=1	[more]

BLAST of Carg12462 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01300.1	8.5e-61	66.26	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]
AT5G01300.2	4.5e-46	67.20	PEBP (phosphatidylethanolamine-binding protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008914	Phosphatidylethanolamine-binding protein	PFAM	PF01161	PBP	coord: 20..167 e-value: 1.8E-26 score: 93.0
IPR036610	PEBP-like superfamily	GENE3D	3.90.280.10		coord: 1..167 e-value: 9.5E-41 score: 141.4
IPR036610	PEBP-like superfamily	SUPERFAMILY	49777	PEBP-like	coord: 7..167
IPR005247	YbhB/YbcL	TIGRFAM	TIGR00481	TIGR00481	coord: 32..166 e-value: 3.0E-28 score: 96.4
IPR005247	YbhB/YbcL	PANTHER	PTHR30289	UNCHARACTERIZED PROTEIN YBCL-RELATED	coord: 4..166
IPR005247	YbhB/YbcL	CDD	cd00865	PEBP_bact_arch	coord: 8..167 e-value: 4.65368E-45 score: 143.51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..108
None	No IPR available	PANTHER	PTHR30289:SF1	PEBP (PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN) FAMILY PROTEIN	coord: 4..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12462-RA	Carg12462-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane