Carg12262 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12262
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Zinc finger CCCH domain-containing protein
Location	Carg_Chr11: 2977852 .. 2979003 (-)
RNA-Seq Expression	Carg12262
Synteny	Carg12262

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATCGGCCAACGCCACCGACCTGGTCCGTTGCTTCATATCACTCCATTGACGATACCGGAGGAACCTGCGAACGAGACGCGGCTTCCTTTTCCTCTGAGTGGAATCTCGGTGAGTTCTGATGACAATGGTAACGGCGGCGATTATTCTCCCTATCATTTGCAGGAAGTCCTTGCGGCATTTCAGCGATATCTGCCTTCGACGAGTGAGTCGGAGATTGAATCTGATTTGGAGTTGTCCGGCCGGGAATCGGATGTTCCGGTGGATGCTTACTCTTGCGATCAATTTAGAATATTCGAGTTCAAGGTGAGGAAGTGTACGCGTGGACGGTCTCATGATTGGACGGAGTGCCCGTTTGCTCATCCTGGCGAGAAGGCTCGCCGGAGAGATCCGAGGAAGTATCATTACTCCGGTACGGCGTGCCCCGACTTTCGAAAAGGTAGCTGCAAAAAAGGCGAGTCGTGCGAGTTTGCGCATGGTGTATTTGAATGTTGGCTCCATCCTGCACGTTACAGGACTCAGCCGTGCAAGGACGGGATCAACTGTCGTAGGAGAGTTTGTTTCTTCGCCCATACTCCCGAGCAACTTAGGGTTTTGCCTCAGCAGAGTCCGAAAGACGCGAATTCGCCTGACTCATATGAAGAATCTCCTCTGCGGCAGTGTTTGGATGGAACCTGTGCGAAATCGCTTCCGTTTCTGTCTTCTCCGGTGTCCGTTTCGCCGTCGGCGACTCCAGTTGACTCTCCACCGATATCGCCGATGACTAGGTCGCTCGCCCGGTCTCTTGGCTCAAGTTCCGTCAATGAAATTGTCGCATCCCTCCACATGCATCTAAGCAAGGTGAATTCTCTACCATCTTCCTGGAATGTTCAAATTGGATCTCCCGGTTATCCGTCTCGAATCCGCCCTGGATTTTGTAGCCTTCCAACTACACCAACTCAGCCTCCAACAGGTCCAGGAGTTGGATTGCTAGACTTCACGGACCATGGATTCGTGGAGGAACCGGCAATGGAGCGAGTCGAATCGGGAAGGGAGCTGAGGGCAAAGATGCTGCAGAAACTGAGTGAGGAAAATTCTTTGGACTTGGCTGATTCAGGCCCTTCAGACTGCACACCGGACGTTGAATGGGTATCAGATCTGGTAAACTGA

mRNA sequence

ATGGTGATCGGCCAACGCCACCGACCTGGTCCGTTGCTTCATATCACTCCATTGACGATACCGGAGGAACCTGCGAACGAGACGCGGCTTCCTTTTCCTCTGAGTGGAATCTCGGTGAGTTCTGATGACAATGGTAACGGCGGCGATTATTCTCCCTATCATTTGCAGGAAGTCCTTGCGGCATTTCAGCGATATCTGCCTTCGACGAGTGAGTCGGAGATTGAATCTGATTTGGAGTTGTCCGGCCGGGAATCGGATGTTCCGGTGGATGCTTACTCTTGCGATCAATTTAGAATATTCGAGTTCAAGGTGAGGAAGTGTACGCGTGGACGGTCTCATGATTGGACGGAGTGCCCGTTTGCTCATCCTGGCGAGAAGGCTCGCCGGAGAGATCCGAGGAAGTATCATTACTCCGGTACGGCGTGCCCCGACTTTCGAAAAGGTAGCTGCAAAAAAGGCGAGTCGTGCGAGTTTGCGCATGGTGTATTTGAATGTTGGCTCCATCCTGCACGTTACAGGACTCAGCCGTGCAAGGACGGGATCAACTGTCGTAGGAGAGTTTGTTTCTTCGCCCATACTCCCGAGCAACTTAGGGTTTTGCCTCAGCAGAGTCCGAAAGACGCGAATTCGCCTGACTCATATGAAGAATCTCCTCTGCGGCAGTGTTTGGATGGAACCTGTGCGAAATCGCTTCCGTTTCTGTCTTCTCCGGTGTCCGTTTCGCCGTCGGCGACTCCAGTTGACTCTCCACCGATATCGCCGATGACTAGGTCGCTCGCCCGGTCTCTTGGCTCAAGTTCCGTCAATGAAATTGTCGCATCCCTCCACATGCATCTAAGCAAGGTGAATTCTCTACCATCTTCCTGGAATGTTCAAATTGGATCTCCCGGTTATCCGTCTCGAATCCGCCCTGGATTTTGTAGCCTTCCAACTACACCAACTCAGCCTCCAACAGGTCCAGGAGTTGGATTGCTAGACTTCACGGACCATGGATTCGTGGAGGAACCGGCAATGGAGCGAGTCGAATCGGGAAGGGAGCTGAGGGCAAAGATGCTGCAGAAACTGAGTGAGGAAAATTCTTTGGACTTGGCTGATTCAGGCCCTTCAGACTGCACACCGGACGTTGAATGGGTATCAGATCTGGTAAACTGA

Coding sequence (CDS)

ATGGTGATCGGCCAACGCCACCGACCTGGTCCGTTGCTTCATATCACTCCATTGACGATACCGGAGGAACCTGCGAACGAGACGCGGCTTCCTTTTCCTCTGAGTGGAATCTCGGTGAGTTCTGATGACAATGGTAACGGCGGCGATTATTCTCCCTATCATTTGCAGGAAGTCCTTGCGGCATTTCAGCGATATCTGCCTTCGACGAGTGAGTCGGAGATTGAATCTGATTTGGAGTTGTCCGGCCGGGAATCGGATGTTCCGGTGGATGCTTACTCTTGCGATCAATTTAGAATATTCGAGTTCAAGGTGAGGAAGTGTACGCGTGGACGGTCTCATGATTGGACGGAGTGCCCGTTTGCTCATCCTGGCGAGAAGGCTCGCCGGAGAGATCCGAGGAAGTATCATTACTCCGGTACGGCGTGCCCCGACTTTCGAAAAGGTAGCTGCAAAAAAGGCGAGTCGTGCGAGTTTGCGCATGGTGTATTTGAATGTTGGCTCCATCCTGCACGTTACAGGACTCAGCCGTGCAAGGACGGGATCAACTGTCGTAGGAGAGTTTGTTTCTTCGCCCATACTCCCGAGCAACTTAGGGTTTTGCCTCAGCAGAGTCCGAAAGACGCGAATTCGCCTGACTCATATGAAGAATCTCCTCTGCGGCAGTGTTTGGATGGAACCTGTGCGAAATCGCTTCCGTTTCTGTCTTCTCCGGTGTCCGTTTCGCCGTCGGCGACTCCAGTTGACTCTCCACCGATATCGCCGATGACTAGGTCGCTCGCCCGGTCTCTTGGCTCAAGTTCCGTCAATGAAATTGTCGCATCCCTCCACATGCATCTAAGCAAGGTGAATTCTCTACCATCTTCCTGGAATGTTCAAATTGGATCTCCCGGTTATCCGTCTCGAATCCGCCCTGGATTTTGTAGCCTTCCAACTACACCAACTCAGCCTCCAACAGGTCCAGGAGTTGGATTGCTAGACTTCACGGACCATGGATTCGTGGAGGAACCGGCAATGGAGCGAGTCGAATCGGGAAGGGAGCTGAGGGCAAAGATGCTGCAGAAACTGAGTGAGGAAAATTCTTTGGACTTGGCTGATTCAGGCCCTTCAGACTGCACACCGGACGTTGAATGGGTATCAGATCTGGTAAACTGA

Protein sequence

MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLAAFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDGINCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSVSPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPSRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENSLDLADSGPSDCTPDVEWVSDLVN

Homology

[Close]

BLAST of Carg12262 vs. NCBI nr
Match: KAG7021914.1 (Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 797.3 bits (2058), Expect = 5.6e-227
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA
Sbjct: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
           AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF
Sbjct: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
           INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV
Sbjct: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300
           SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS
Sbjct: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300

Query: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360
           RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS
Sbjct: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360

Query: 361 LDLADSGPSDCTPDVEWVSDLVN 384
           LDLADSGPSDCTPDVEWVSDLVN
Sbjct: 361 LDLADSGPSDCTPDVEWVSDLVN 383

[Close]

BLAST of Carg12262 vs. NCBI nr
Match: KAG6588017.1 (Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 795.0 bits (2052), Expect = 2.8e-226
Identity = 381/383 (99.48%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA
Sbjct: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
           AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF
Sbjct: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
           INCRRRVCFFAHTPEQLRVLPQQSP+DANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV
Sbjct: 181 INCRRRVCFFAHTPEQLRVLPQQSPRDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300
           SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHL+KVNSLPSSWNVQIGSPGYPS
Sbjct: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLNKVNSLPSSWNVQIGSPGYPS 300

Query: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360
           RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS
Sbjct: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360

Query: 361 LDLADSGPSDCTPDVEWVSDLVN 384
           LDLADSGPSDCTPDVEWVSDLVN
Sbjct: 361 LDLADSGPSDCTPDVEWVSDLVN 383

[Close]

BLAST of Carg12262 vs. NCBI nr
Match: XP_023005444.1 (zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima])

HSP 1 Score: 785.4 bits (2027), Expect = 2.2e-223
Identity = 375/383 (97.91%), Postives = 381/383 (99.48%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           MVIGQRHRPGPLLHITPL IP+EPANETRLPFPLSGISVSSDDN NGGDYSPYHLQEVLA
Sbjct: 1   MVIGQRHRPGPLLHITPLMIPDEPANETRLPFPLSGISVSSDDNANGGDYSPYHLQEVLA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
           AFQ+YLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECP+
Sbjct: 61  AFQQYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPY 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
           INCRRRVCFFAHTPEQLRVLPQQSP+DANSPDSY+ESPLRQCLDGTCAKSLPFLSSP+SV
Sbjct: 181 INCRRRVCFFAHTPEQLRVLPQQSPRDANSPDSYDESPLRQCLDGTCAKSLPFLSSPLSV 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300
           SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS
Sbjct: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300

Query: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360
           RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS
Sbjct: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360

Query: 361 LDLADSGPSDCTPDVEWVSDLVN 384
           LDLADSGPSDCTPDVEWVSDLVN
Sbjct: 361 LDLADSGPSDCTPDVEWVSDLVN 383

[Close]

BLAST of Carg12262 vs. NCBI nr
Match: XP_022933832.1 (zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata])

HSP 1 Score: 784.6 bits (2025), Expect = 3.8e-223
Identity = 376/383 (98.17%), Postives = 381/383 (99.48%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           MVIGQRHRPGPLLHITPLTIPEEPAN+TRLPFPLSGISVSSDDN NGGDYSPYHLQEVLA
Sbjct: 1   MVIGQRHRPGPLLHITPLTIPEEPANQTRLPFPLSGISVSSDDNANGGDYSPYHLQEVLA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
           AFQRYLPSTSESEIES+LELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF
Sbjct: 61  AFQRYLPSTSESEIESNLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHP+RYRTQPCKDG
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPSRYRTQPCKDG 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
           INCRRRVCFFAHTPEQLRVLPQQSP+DANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV
Sbjct: 181 INCRRRVCFFAHTPEQLRVLPQQSPRDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300
           SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS
Sbjct: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300

Query: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360
           RIRPGFCSLPTTPTQPPTGPGVGLLDFT+ GFVEEPAMERVESGRELRAKMLQKLSEENS
Sbjct: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTNRGFVEEPAMERVESGRELRAKMLQKLSEENS 360

Query: 361 LDLADSGPSDCTPDVEWVSDLVN 384
           LDLADSGPSDCTPDVEWVSDLVN
Sbjct: 361 LDLADSGPSDCTPDVEWVSDLVN 383

[Close]

BLAST of Carg12262 vs. NCBI nr
Match: XP_023531870.1 (zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 784.6 bits (2025), Expect = 3.8e-223
Identity = 375/383 (97.91%), Postives = 379/383 (98.96%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDN NGGDYSPYHLQEVLA
Sbjct: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNANGGDYSPYHLQEVLA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
           AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF
Sbjct: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHP+RYRTQPCKDG
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPSRYRTQPCKDG 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
           INCRRRVCFFAHTPEQLRVLPQQSP+DANSPDSY+ESPLRQCLDGTCAK LPFLSSPVSV
Sbjct: 181 INCRRRVCFFAHTPEQLRVLPQQSPRDANSPDSYDESPLRQCLDGTCAKPLPFLSSPVSV 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300
           SPSATPVDSPP+SPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNV IGSPGYPS
Sbjct: 241 SPSATPVDSPPVSPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVPIGSPGYPS 300

Query: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360
           RIRPGFCSLPTTPTQPPTGPGVGLLD TDHGFVEEPAMERVESGRELRAKMLQKLSEENS
Sbjct: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDLTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360

Query: 361 LDLADSGPSDCTPDVEWVSDLVN 384
           LDLADSGPSDCTPDVEWVSDLVN
Sbjct: 361 LDLADSGPSDCTPDVEWVSDLVN 383

[Close]

BLAST of Carg12262 vs. ExPASy Swiss-Prot
Match: O82199 (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.0e-101
Identity = 214/400 (53.50%), Postives = 270/400 (67.50%), Query Frame = 0


Query: 1   MVIGQRHRP-GPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVL 60
           M+IG+ HR   P +HI P  + E+          +S I  S D    GG      + E L
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSED--------LTVSDIYGSPD----GGS----SMMEAL 60

Query: 61  AAFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECP 120
           A  QRYLPS +E + +SD +LSG +S  P+DAY+CD FR++EFKVR+C RGRSHDWTECP
Sbjct: 61  AELQRYLPS-NEPDPDSDPDLSGPDS--PIDAYTCDHFRMYEFKVRRCARGRSHDWTECP 120

Query: 121 FAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKD 180
           +AHPGEKARRRDPRK+HYSGTACP+FRKG CK+G++CEF+HGVFECWLHPARYRTQPCKD
Sbjct: 121 YAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKD 180

Query: 181 GINCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVS 240
           G NCRRRVCFFAH+P+Q+RVLP QSP   +S D          L  T  ++  F     S
Sbjct: 181 GGNCRRRVCFFAHSPDQIRVLPNQSPDRVDSFD---------VLSPTIRRAFQF-----S 240

Query: 241 VSPSATPVDSPPISPMTRS------LARSLGSSSVNEIVASL-HMHLSKV-NSLPSSWNV 300
           +SPS+   +SPP+SP   S      L+RSLGS+  N++VASL ++ L+KV +SL SS+N 
Sbjct: 241 ISPSS---NSPPVSPRGDSDSSCSLLSRSLGSNLGNDVVASLRNLQLNKVKSSLSSSYNN 300

Query: 301 QIGSPG------YPSRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGR 360
           QIG  G        S + PGF SLPTTPT+P      G ++  ++G  EEPAMERVESGR
Sbjct: 301 QIGGYGSGFGSPRGSVLGPGFRSLPTTPTRP------GFMNIWENGLEEEPAMERVESGR 358

Query: 361 ELRAKMLQKLSEENSLDLADSGP---SDCTPDVEWVSDLV 383
           ELRA++ +KLS+EN +   +  P   +  TPDV WVSDLV
Sbjct: 361 ELRAQLFEKLSKENCMGRIEPDPDQGAGDTPDVGWVSDLV 358

[Close]

BLAST of Carg12262 vs. ExPASy Swiss-Prot
Match: Q9M0G2 (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 7.4e-97
Identity = 206/388 (53.09%), Postives = 252/388 (64.95%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           M+IG+  R  P + I P  + EE    +    P+           N  D S   + E LA
Sbjct: 1   MMIGETRRTYPTVEIPPWPVLEE-LTTSEFFSPVM----------NSPDCS---MLEALA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
             QRYLPS +E + ES  +L G +S  P+DAYSCD FR+++FKVR+C RGRSHDWTECP+
Sbjct: 61  GLQRYLPS-NEPDPESYPDLLGPDS--PIDAYSCDHFRMYDFKVRRCARGRSHDWTECPY 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKG CKKG+SCEFAHGVFECWLHPARYRTQPCKDG
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDG 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
            NC R++CFFAH+P+QLR L  +SP   +S D    SP+R       A++     SPVS 
Sbjct: 181 GNCLRKICFFAHSPDQLRFLHTRSPDRVDSFD--VSSPIR-------ARAFQLSISPVSG 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASL-HMHLSKVNSLPSSWNV-QIGSPGY 300
           SP  +P      SPMT+SL+RSLGS S+N++V S  ++  + V S P +  +   GSP  
Sbjct: 241 SPPMSPRADSESSPMTQSLSRSLGSCSINDVVPSFRNLQFNSVKSFPRNNPLFGFGSP-R 300

Query: 301 PSRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMER-VESGRELRAKMLQKLSE 360
            S + PGF SLPTTPT+P      G LD  ++G  EEP MER VESGRELR KM +KL +
Sbjct: 301 GSILGPGFQSLPTTPTRP------GNLDIWEYGLEEEPVMERVVESGRELREKMREKLHK 355

Query: 361 ENSLDLADSGPSDC---TPDVEWVSDLV 383
           EN +D     P       PDV WVSDL+
Sbjct: 361 ENCMDRVAQDPDQNLGEAPDVGWVSDLL 355

[Close]

BLAST of Carg12262 vs. ExPASy Swiss-Prot
Match: Q9FU27 (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.2e-88
Identity = 190/376 (50.53%), Postives = 244/376 (64.89%), Query Frame = 0


Query: 33  PLSGISVSSDDNGNGGDYSPYHLQEVLAAFQRYLPSTSESEIESDLELSGRESDVPVDAY 92
           P+SG+ V     G G + +PY    V+AA + YLP+ ++  + +D E         VDAY
Sbjct: 18  PVSGVDVLGGGGGGGDEMTPY----VIAALRDYLPA-NDVGVGADEEEEAAAMAAAVDAY 77

Query: 93  SCDQFRIFEFKVRKCTRGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGSCKK 152
           +CD+FR++EFKVR+C RGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKG CK+
Sbjct: 78  ACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKR 137

Query: 153 GESCEFAHGVFECWLHPARYRTQPCKDGINCRRRVCFFAHTPEQLRVLP--QQSPKD-AN 212
           G++CE+AHGVFECWLHPARYRTQPCKDG  CRRRVCFFAHTP+QLRVLP  Q SP+  A+
Sbjct: 138 GDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQSSPRSVAS 197

Query: 213 SP--DSYEESPL-RQCLDGTCAKSLPFLSSPVSV---SPSATPVDSPPISPMTRSLARSL 272
           SP  +SY+ SPL RQ  +    K++   SSP S     P + P +SPP+SP   +  R  
Sbjct: 198 SPLAESYDGSPLRRQAFESYLTKTI-MSSSPTSTLMSPPKSPPSESPPLSPDGAAAIRR- 257

Query: 273 GS-----SSVNEIVASL-HMHLSKVNSLPS-SWNVQIGSPGYPS-RIRPGFCSLPTTP-- 332
           GS     S VN+++AS   + L+KV S PS  W+    S  Y S +   G  SLPTTP  
Sbjct: 258 GSWPGVGSPVNDVLASFRQLRLNKVKSSPSGGWSYPSSSAVYGSPKAATGLYSLPTTPLA 317

Query: 333 ---TQPPTGPGVGLLDFTDHGFV-EEPAMERVESGRELRAKMLQKLSEENSL--DLADSG 384
              T       +  L+  D G + +E  ++RVESGR LR K+ ++LS + ++  D     
Sbjct: 318 STATVTTASSFMPNLEPLDLGLIGDEEPVQRVESGRALREKVFERLSRDGAISGDATAFA 377

[Close]

BLAST of Carg12262 vs. ExPASy Swiss-Prot
Match: Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.9e-84
Identity = 192/405 (47.41%), Postives = 243/405 (60.00%), Query Frame = 0


Query: 24  PANETRLPFPLSGISVSSDDNGNGGDYS-----PYHLQEVLAAFQRYLPSTSESEIESDL 83
           P  +  +  P+SG+       G GG  S     PYHL + L   + YLPS   +  E + 
Sbjct: 11  PPWQQHVASPVSGV------EGGGGRESEVVAAPYHLLDTL---RHYLPSNEAAAAEDEE 70

Query: 84  ELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPFAHPGEKARRRDPRKYHYS 143
           E +   +   VDAY+CD+FR++EFKVR+C RGRSHDWTECPFAHPGEKARRRDPR+Y YS
Sbjct: 71  EAAAVAA--AVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYS 130

Query: 144 GTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDGINCRRRVCFFAHTPEQLR 203
           GTACPDFRKG CK+G++CEFAHGVFECWLHPARYRTQPCKDG  CRRRVCFFAHTP+QLR
Sbjct: 131 GTACPDFRKGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLR 190

Query: 204 VLPQQSPKDANSP----------------DSYEESPL-RQCLDGTCAKSLPFLSSPVSV- 263
           VLP    + +NSP                +SY+ SPL RQ  +    KS+   SSP S  
Sbjct: 191 VLPPSQQQGSNSPRGCGGGGAGAAASPLAESYDGSPLRRQAFESYLTKSI-MSSSPTSTL 250

Query: 264 --SPSATPVDSPPISP-----MTRSLARSLGSSSVNEIVASL-HMHLSKVNSLPSSWN-- 323
              P + P +SPP+SP     + R     +G S VN++  SL  + L    S PS  +  
Sbjct: 251 VSPPRSPPSESPPLSPDAAGALRRGAWAGVG-SPVNDVHVSLRQLRLGSPRSAPSCASFL 310

Query: 324 ---VQIGSPGYP-SRIRPGFCSLPTTPTQ-----PPTGPGVGL-LDFTDHGFV-EEPAME 383
               Q GSP  P +       SLP+TPT+       T  G  + ++  D G + EE  ME
Sbjct: 311 PAGYQYGSPKSPAAAAAAALYSLPSTPTRLSPVTVTTASGATVTVEPLDLGLIEEEQPME 370

[Close]

BLAST of Carg12262 vs. ExPASy Swiss-Prot
Match: O82307 (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.1e-75
Identity = 172/363 (47.38%), Postives = 217/363 (59.78%), Query Frame = 0


Query: 1   MVIGQ-RHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVL 60
           M+IG+ ++RP P +HI       +P      PF  S ++++S    N   +SP    +  
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATISSPF--SSVNLNS---VNDYPHSPSPYLDSF 60

Query: 61  AAFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECP 120
           A+  RYLPS +E   +SD   SG ES    D++S D+FRI+EFK+R+C RGRSHDWTECP
Sbjct: 61  ASLFRYLPS-NELTNDSD-SSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECP 120

Query: 121 FAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKD 180
           FAHPGEKARRRDPRK+HYSGTACP+FRKGSC++G+SCEF+HGVFECWLHP+RYRTQPCKD
Sbjct: 121 FAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKD 180

Query: 181 GINCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVS 240
           G +CRRR+CFFAHT EQLRVLP     D         SP                 + + 
Sbjct: 181 GTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP-----------------TSIL 240

Query: 241 VSPS-ATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGY 300
           VSPS + P +SPP+SP            S  E++AS  M   ++N    SW     S   
Sbjct: 241 VSPSFSPPSESPPLSP------------STGELIAS--MRKMQLNGGGCSW-----SSPM 300

Query: 301 PSRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEE 360
            S +R  F S    P Q  T P +      +    E PAME VESG+ELRA+M  +LS E
Sbjct: 301 RSAVRLPFSS-SLRPIQAATWPRI-----REFEIEEAPAMEFVESGKELRAEMYARLSRE 314

Query: 361 NSL 362
           NSL
Sbjct: 361 NSL 314

[Close]

BLAST of Carg12262 vs. ExPASy TrEMBL
Match: A0A6J1KZ72 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111498425 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.1e-223
Identity = 375/383 (97.91%), Postives = 381/383 (99.48%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           MVIGQRHRPGPLLHITPL IP+EPANETRLPFPLSGISVSSDDN NGGDYSPYHLQEVLA
Sbjct: 1   MVIGQRHRPGPLLHITPLMIPDEPANETRLPFPLSGISVSSDDNANGGDYSPYHLQEVLA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
           AFQ+YLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECP+
Sbjct: 61  AFQQYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPY 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
           INCRRRVCFFAHTPEQLRVLPQQSP+DANSPDSY+ESPLRQCLDGTCAKSLPFLSSP+SV
Sbjct: 181 INCRRRVCFFAHTPEQLRVLPQQSPRDANSPDSYDESPLRQCLDGTCAKSLPFLSSPLSV 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300
           SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS
Sbjct: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300

Query: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360
           RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS
Sbjct: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360

Query: 361 LDLADSGPSDCTPDVEWVSDLVN 384
           LDLADSGPSDCTPDVEWVSDLVN
Sbjct: 361 LDLADSGPSDCTPDVEWVSDLVN 383

[Close]

BLAST of Carg12262 vs. ExPASy TrEMBL
Match: A0A6J1F0X6 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662 GN=LOC111441128 PE=4 SV=1)

HSP 1 Score: 784.6 bits (2025), Expect = 1.8e-223
Identity = 376/383 (98.17%), Postives = 381/383 (99.48%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           MVIGQRHRPGPLLHITPLTIPEEPAN+TRLPFPLSGISVSSDDN NGGDYSPYHLQEVLA
Sbjct: 1   MVIGQRHRPGPLLHITPLTIPEEPANQTRLPFPLSGISVSSDDNANGGDYSPYHLQEVLA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
           AFQRYLPSTSESEIES+LELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF
Sbjct: 61  AFQRYLPSTSESEIESNLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHP+RYRTQPCKDG
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPSRYRTQPCKDG 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
           INCRRRVCFFAHTPEQLRVLPQQSP+DANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV
Sbjct: 181 INCRRRVCFFAHTPEQLRVLPQQSPRDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300
           SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS
Sbjct: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGYPS 300

Query: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEENS 360
           RIRPGFCSLPTTPTQPPTGPGVGLLDFT+ GFVEEPAMERVESGRELRAKMLQKLSEENS
Sbjct: 301 RIRPGFCSLPTTPTQPPTGPGVGLLDFTNRGFVEEPAMERVESGRELRAKMLQKLSEENS 360

Query: 361 LDLADSGPSDCTPDVEWVSDLVN 384
           LDLADSGPSDCTPDVEWVSDLVN
Sbjct: 361 LDLADSGPSDCTPDVEWVSDLVN 383

[Close]

BLAST of Carg12262 vs. ExPASy TrEMBL
Match: A0A6J1HCU1 (zinc finger CCCH domain-containing protein 20 OS=Cucurbita moschata OX=3662 GN=LOC111461661 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.7e-192
Identity = 327/383 (85.38%), Postives = 353/383 (92.17%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           M+IG+RHRPGP++HITPLTIPEEPA+ETR P+PLSGISVSSD NGNGGDYS Y+L+E LA
Sbjct: 1   MIIGERHRPGPVVHITPLTIPEEPASETRFPYPLSGISVSSDGNGNGGDYSSYYLKEALA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
           A QRY    +ESEIESD ELSGRESDVPVDAYSCD FRIFEFKVRKCTRGRSHDWTECPF
Sbjct: 61  ALQRY---ANESEIESDSELSGRESDVPVDAYSCDNFRIFEFKVRKCTRGRSHDWTECPF 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKG+SCEFAHGVFECWLHPARYRTQPCKD 
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKDE 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
            NCRRRVCFFAHTPEQLRVLPQQSP+ A SP+ Y+ESP+RQCLDG+CAKSLPFLSSPVSV
Sbjct: 181 TNCRRRVCFFAHTPEQLRVLPQQSPRSAYSPEPYDESPVRQCLDGSCAKSLPFLSSPVSV 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASL-HMHLSKVNSLPSSWNVQIGSPGYP 300
           SPSATPVDSPP+SPMTRSL RSLGSSS+NE+VASL ++HLSKV SLPSSWNVQIGSPGYP
Sbjct: 241 SPSATPVDSPPLSPMTRSLGRSLGSSSINEMVASLRNLHLSKVKSLPSSWNVQIGSPGYP 300

Query: 301 SRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEEN 360
           SRI  GFCSLPTTPT+ PT PGVGLLDF+DHG  EEPAMERVESGRELRAKML+KLS+EN
Sbjct: 301 SRICHGFCSLPTTPTRAPTAPGVGLLDFSDHGLQEEPAMERVESGRELRAKMLEKLSKEN 360

Query: 361 SLDLADSGPSDCTPDVEWVSDLV 383
           SLDL DS  S CTPDV WVS+L+
Sbjct: 361 SLDLVDSSSSACTPDVGWVSELL 380

[Close]

BLAST of Carg12262 vs. ExPASy TrEMBL
Match: A0A6J1CV97 (zinc finger CCCH domain-containing protein 49 OS=Momordica charantia OX=3673 GN=LOC111014526 PE=4 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 8.3e-192
Identity = 325/384 (84.64%), Postives = 351/384 (91.41%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGN-GGDYSPYHLQEVL 60
           M++G+RHRP  ++HITPL IPEEPANETR PFPLSGISVS D N N GGDYSPY+LQE L
Sbjct: 1   MMLGERHRPAAVVHITPLMIPEEPANETRFPFPLSGISVSPDGNVNGGGDYSPYYLQEAL 60

Query: 61  AAFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECP 120
           AA QRYLP  +ESEIESD E+  RESDVPVDAYSCD FRIFEFKVRKCTRGRSHDWTECP
Sbjct: 61  AALQRYLPPANESEIESDSEMLARESDVPVDAYSCDHFRIFEFKVRKCTRGRSHDWTECP 120

Query: 121 FAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKD 180
           +AHPGEKARRRDPRKY+YSGTACPDFRKGSCKKG+SCEFAHGVFECWLHPARYRTQPCKD
Sbjct: 121 YAHPGEKARRRDPRKYNYSGTACPDFRKGSCKKGDSCEFAHGVFECWLHPARYRTQPCKD 180

Query: 181 GINCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVS 240
           G NCRRRVCFFAHTPEQLRVLPQQSP+ ANSPDSY+ESPLRQ LDG+CAKSLPFLSSPVS
Sbjct: 181 GTNCRRRVCFFAHTPEQLRVLPQQSPRSANSPDSYDESPLRQSLDGSCAKSLPFLSSPVS 240

Query: 241 VSPSATPVDSPPISPMTRSLARSLGSSSVNEIVASL-HMHLSKVNSLPSSWNVQIGSPGY 300
           VSPSATPVDSPP+SPMTRSL RSLGSS++NE+VASL ++HLSKV SLPSSWN Q+GSP Y
Sbjct: 241 VSPSATPVDSPPLSPMTRSLGRSLGSSNINEMVASLRNLHLSKVKSLPSSWNAQVGSPSY 300

Query: 301 PSRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEE 360
            SRIRPGFCSLPTTPT+ PTG G+GLLDF DHGF EEPAMERVESGRELRAKML+KLS+E
Sbjct: 301 HSRIRPGFCSLPTTPTRAPTGHGIGLLDFLDHGFEEEPAMERVESGRELRAKMLEKLSKE 360

Query: 361 NSLDLADSGPSDCTPDVEWVSDLV 383
           NSLDL DS PS C PDVEWVS+LV
Sbjct: 361 NSLDLVDSSPSVCAPDVEWVSELV 384

[Close]

BLAST of Carg12262 vs. ExPASy TrEMBL
Match: A0A6J1JF83 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111485211 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 3.5e-190
Identity = 322/383 (84.07%), Postives = 351/383 (91.64%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           M+IG+RHRPGP++HITPLTIPEEPA+ETR  +PLSGISVSSD N NGGDYS Y+L+E LA
Sbjct: 1   MIIGERHRPGPVVHITPLTIPEEPASETRFTYPLSGISVSSDGNANGGDYSSYYLKEALA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
           A QRY   T+ SEIESD ELSGRESDVPVDAYSCD FRIFEFKVRKCTRGRSHDWTECPF
Sbjct: 61  ALQRY---TNVSEIESDSELSGRESDVPVDAYSCDNFRIFEFKVRKCTRGRSHDWTECPF 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKG+CKKG+SCEFAHGVFECWLHPARYRTQPCKDG
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGNCKKGDSCEFAHGVFECWLHPARYRTQPCKDG 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
            NCRRRVCFFAHTPEQLRVLPQQSP+ A SP+ Y+ESP+RQCLDG+CAKS+PFLSSPVSV
Sbjct: 181 TNCRRRVCFFAHTPEQLRVLPQQSPRSAYSPEPYDESPVRQCLDGSCAKSMPFLSSPVSV 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASL-HMHLSKVNSLPSSWNVQIGSPGYP 300
           SPSATPVDSPP+SPMTRSL RSLGSSS+NE+VASL ++HLSKV SLPSSWNVQIGSPGYP
Sbjct: 241 SPSATPVDSPPLSPMTRSLGRSLGSSSINEMVASLRNLHLSKVKSLPSSWNVQIGSPGYP 300

Query: 301 SRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEEN 360
           SR+  GFCSLPTTPT+ PT PGVG LDF+DHG  EEPAMERVESGRELRAKML+KLS+EN
Sbjct: 301 SRVCHGFCSLPTTPTRAPTAPGVGRLDFSDHGLQEEPAMERVESGRELRAKMLEKLSKEN 360

Query: 361 SLDLADSGPSDCTPDVEWVSDLV 383
           SLDL DS  S CTPDV WVS+L+
Sbjct: 361 SLDLVDSSSSACTPDVGWVSELL 380

[Close]

BLAST of Carg12262 vs. TAIR 10
Match: AT2G19810.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 371.7 bits (953), Expect = 7.1e-103
Identity = 214/400 (53.50%), Postives = 270/400 (67.50%), Query Frame = 0


Query: 1   MVIGQRHRP-GPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVL 60
           M+IG+ HR   P +HI P  + E+          +S I  S D    GG      + E L
Sbjct: 1   MMIGESHRGFNPTVHIPPWPLSED--------LTVSDIYGSPD----GGS----SMMEAL 60

Query: 61  AAFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECP 120
           A  QRYLPS +E + +SD +LSG +S  P+DAY+CD FR++EFKVR+C RGRSHDWTECP
Sbjct: 61  AELQRYLPS-NEPDPDSDPDLSGPDS--PIDAYTCDHFRMYEFKVRRCARGRSHDWTECP 120

Query: 121 FAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKD 180
           +AHPGEKARRRDPRK+HYSGTACP+FRKG CK+G++CEF+HGVFECWLHPARYRTQPCKD
Sbjct: 121 YAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKD 180

Query: 181 GINCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVS 240
           G NCRRRVCFFAH+P+Q+RVLP QSP   +S D          L  T  ++  F     S
Sbjct: 181 GGNCRRRVCFFAHSPDQIRVLPNQSPDRVDSFD---------VLSPTIRRAFQF-----S 240

Query: 241 VSPSATPVDSPPISPMTRS------LARSLGSSSVNEIVASL-HMHLSKV-NSLPSSWNV 300
           +SPS+   +SPP+SP   S      L+RSLGS+  N++VASL ++ L+KV +SL SS+N 
Sbjct: 241 ISPSS---NSPPVSPRGDSDSSCSLLSRSLGSNLGNDVVASLRNLQLNKVKSSLSSSYNN 300

Query: 301 QIGSPG------YPSRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGR 360
           QIG  G        S + PGF SLPTTPT+P      G ++  ++G  EEPAMERVESGR
Sbjct: 301 QIGGYGSGFGSPRGSVLGPGFRSLPTTPTRP------GFMNIWENGLEEEPAMERVESGR 358

Query: 361 ELRAKMLQKLSEENSLDLADSGP---SDCTPDVEWVSDLV 383
           ELRA++ +KLS+EN +   +  P   +  TPDV WVSDLV
Sbjct: 361 ELRAQLFEKLSKENCMGRIEPDPDQGAGDTPDVGWVSDLV 358

[Close]

BLAST of Carg12262 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 355.5 bits (911), Expect = 5.3e-98
Identity = 206/388 (53.09%), Postives = 252/388 (64.95%), Query Frame = 0


Query: 1   MVIGQRHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVLA 60
           M+IG+  R  P + I P  + EE    +    P+           N  D S   + E LA
Sbjct: 1   MMIGETRRTYPTVEIPPWPVLEE-LTTSEFFSPVM----------NSPDCS---MLEALA 60

Query: 61  AFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPF 120
             QRYLPS +E + ES  +L G +S  P+DAYSCD FR+++FKVR+C RGRSHDWTECP+
Sbjct: 61  GLQRYLPS-NEPDPESYPDLLGPDS--PIDAYSCDHFRMYDFKVRRCARGRSHDWTECPY 120

Query: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKDG 180
           AHPGEKARRRDPRKYHYSGTACPDFRKG CKKG+SCEFAHGVFECWLHPARYRTQPCKDG
Sbjct: 121 AHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDG 180

Query: 181 INCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVSV 240
            NC R++CFFAH+P+QLR L  +SP   +S D    SP+R       A++     SPVS 
Sbjct: 181 GNCLRKICFFAHSPDQLRFLHTRSPDRVDSFD--VSSPIR-------ARAFQLSISPVSG 240

Query: 241 SPSATPVDSPPISPMTRSLARSLGSSSVNEIVASL-HMHLSKVNSLPSSWNV-QIGSPGY 300
           SP  +P      SPMT+SL+RSLGS S+N++V S  ++  + V S P +  +   GSP  
Sbjct: 241 SPPMSPRADSESSPMTQSLSRSLGSCSINDVVPSFRNLQFNSVKSFPRNNPLFGFGSP-R 300

Query: 301 PSRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMER-VESGRELRAKMLQKLSE 360
            S + PGF SLPTTPT+P      G LD  ++G  EEP MER VESGRELR KM +KL +
Sbjct: 301 GSILGPGFQSLPTTPTRP------GNLDIWEYGLEEEPVMERVVESGRELREKMREKLHK 355

Query: 361 ENSLDLADSGPSDC---TPDVEWVSDLV 383
           EN +D     P       PDV WVSDL+
Sbjct: 361 ENCMDRVAQDPDQNLGEAPDVGWVSDLL 355

[Close]

BLAST of Carg12262 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 284.3 bits (726), Expect = 1.5e-76
Identity = 172/363 (47.38%), Postives = 217/363 (59.78%), Query Frame = 0


Query: 1   MVIGQ-RHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVL 60
           M+IG+ ++RP P +HI       +P      PF  S ++++S    N   +SP    +  
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATISSPF--SSVNLNS---VNDYPHSPSPYLDSF 60

Query: 61  AAFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECP 120
           A+  RYLPS +E   +SD   SG ES    D++S D+FRI+EFK+R+C RGRSHDWTECP
Sbjct: 61  ASLFRYLPS-NELTNDSD-SSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECP 120

Query: 121 FAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKD 180
           FAHPGEKARRRDPRK+HYSGTACP+FRKGSC++G+SCEF+HGVFECWLHP+RYRTQPCKD
Sbjct: 121 FAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKD 180

Query: 181 GINCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVS 240
           G +CRRR+CFFAHT EQLRVLP     D         SP                 + + 
Sbjct: 181 GTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP-----------------TSIL 240

Query: 241 VSPS-ATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGY 300
           VSPS + P +SPP+SP            S  E++AS  M   ++N    SW     S   
Sbjct: 241 VSPSFSPPSESPPLSP------------STGELIAS--MRKMQLNGGGCSW-----SSPM 300

Query: 301 PSRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEE 360
            S +R  F S    P Q  T P +      +    E PAME VESG+ELRA+M  +LS E
Sbjct: 301 RSAVRLPFSS-SLRPIQAATWPRI-----REFEIEEAPAMEFVESGKELRAEMYARLSRE 314

Query: 361 NSL 362
           NSL
Sbjct: 361 NSL 314

[Close]

BLAST of Carg12262 vs. TAIR 10
Match: AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 284.3 bits (726), Expect = 1.5e-76
Identity = 172/363 (47.38%), Postives = 217/363 (59.78%), Query Frame = 0


Query: 1   MVIGQ-RHRPGPLLHITPLTIPEEPANETRLPFPLSGISVSSDDNGNGGDYSPYHLQEVL 60
           M+IG+ ++RP P +HI       +P      PF  S ++++S    N   +SP    +  
Sbjct: 1   MMIGENKNRPHPTIHIPQWDQINDPTATISSPF--SSVNLNS---VNDYPHSPSPYLDSF 60

Query: 61  AAFQRYLPSTSESEIESDLELSGRESDVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECP 120
           A+  RYLPS +E   +SD   SG ES    D++S D+FRI+EFK+R+C RGRSHDWTECP
Sbjct: 61  ASLFRYLPS-NELTNDSD-SSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECP 120

Query: 121 FAHPGEKARRRDPRKYHYSGTACPDFRKGSCKKGESCEFAHGVFECWLHPARYRTQPCKD 180
           FAHPGEKARRRDPRK+HYSGTACP+FRKGSC++G+SCEF+HGVFECWLHP+RYRTQPCKD
Sbjct: 121 FAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKD 180

Query: 181 GINCRRRVCFFAHTPEQLRVLPQQSPKDANSPDSYEESPLRQCLDGTCAKSLPFLSSPVS 240
           G +CRRR+CFFAHT EQLRVLP     D         SP                 + + 
Sbjct: 181 GTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATSP-----------------TSIL 240

Query: 241 VSPS-ATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNSLPSSWNVQIGSPGY 300
           VSPS + P +SPP+SP            S  E++AS  M   ++N    SW     S   
Sbjct: 241 VSPSFSPPSESPPLSP------------STGELIAS--MRKMQLNGGGCSW-----SSPM 300

Query: 301 PSRIRPGFCSLPTTPTQPPTGPGVGLLDFTDHGFVEEPAMERVESGRELRAKMLQKLSEE 360
            S +R  F S    P Q  T P +      +    E PAME VESG+ELRA+M  +LS E
Sbjct: 301 RSAVRLPFSS-SLRPIQAATWPRI-----REFEIEEAPAMEFVESGKELRAEMYARLSRE 314

Query: 361 NSL 362
           NSL
Sbjct: 361 NSL 314

[Close]

BLAST of Carg12262 vs. TAIR 10
Match: AT1G03790.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 210.7 bits (535), Expect = 2.1e-54
Identity = 109/221 (49.32%), Postives = 142/221 (64.25%), Query Frame = 0


Query: 72  SEIESDLELSGRES------DVPVDAYSCDQFRIFEFKVRKCTRGRSHDWTECPFAHPGE 131
           SE E D E + RE+          D Y+ D FR+FEFK+R+CTR RSHDWT+CPFAHPGE
Sbjct: 52  SEHEEDNEDNNRENKEYCYDSDSDDPYASDHFRMFEFKIRRCTRSRSHDWTDCPFAHPGE 111

Query: 132 KARRRDPRKYHYSGTACPDFRK-GSCKKGESCEFAHGVFECWLHPARYRTQPCKDGINCR 191
           KARRRDPR++ YSG  CP+FR+ G C +G+ CEFAHGVFECWLHP RYRT+ CKDG +C+
Sbjct: 112 KARRRDPRRFQYSGEVCPEFRRGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCK 171

Query: 192 RRVCFFAHTPEQLRVLPQQSPKDAN-SPDSYEESPLRQCLDGTCAKSLPFLSSPVSVSPS 251
           R+VCFFAH+P QLRVLP ++    + SP    ++P       +   +L    S +S SPS
Sbjct: 172 RKVCFFAHSPRQLRVLPPENVSGVSASPSPAAKNPCCLFCSSSPTSTLLGNLSHLSRSPS 231

Query: 252 ATPVDSPPISPMTRSLARSLGSSSVNEIVASLHMHLSKVNS 285
            +P  SP       S  R+  +S+V+   A+  M+   V S
Sbjct: 232 LSPPMSPANKAAAFSRLRNRAASAVSAAAAAGSMNYKDVLS 272

The following BLAST results are available for this feature:

BLAST of Carg12262 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021914.1	5.6e-227	100.00	Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma s...	[more]
KAG6588017.1	2.8e-226	99.48	Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma s...	[more]
XP_023005444.1	2.2e-223	97.91	zinc finger CCCH domain-containing protein 20-like [Cucurbita maxima]	[more]
XP_022933832.1	3.8e-223	98.17	zinc finger CCCH domain-containing protein 20-like [Cucurbita moschata]	[more]
XP_023531870.1	3.8e-223	97.91	zinc finger CCCH domain-containing protein 20-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg12262 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82199	1.0e-101	53.50	Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M0G2	7.4e-97	53.09	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FU27	2.2e-88	50.53	Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=...	[more]
Q6L4N4	1.9e-84	47.41	Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX...	[more]
O82307	2.1e-75	47.38	Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg12262 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KZ72	1.1e-223	97.91	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1F0X6	1.8e-223	98.17	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1HCU1	1.7e-192	85.38	zinc finger CCCH domain-containing protein 20 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CV97	8.3e-192	84.64	zinc finger CCCH domain-containing protein 49 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1JF83	3.5e-190	84.07	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Carg12262 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19810.1	7.1e-103	53.50	CCCH-type zinc finger family protein	[more]
AT4G29190.1	5.3e-98	53.09	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.1	1.5e-76	47.38	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.2	1.5e-76	47.38	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G03790.1	2.1e-54	49.32	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 171..194 e-value: 8.1 score: 9.0 coord: 136..162 e-value: 2.3E-5 score: 33.8
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 141..161 e-value: 4.3E-6 score: 26.5
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 137..163 score: 13.610065
None	No IPR available	GENE3D	3.30.1370.210		coord: 136..200 e-value: 4.2E-9 score: 38.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..216
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 38..383
None	No IPR available	PANTHER	PTHR14493:SF116	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20	coord: 38..383

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12262-RA	Carg12262-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding