Carg12228 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12228
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Exostosin family protein
Location	Carg_Chr11: 2804062 .. 2804461 (+)
RNA-Seq Expression	Carg12228
Synteny	Carg12228

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCCTCCAGAAACTTATGTAGCGAGAAATCTTCTTAGAGATCTTGGAGGAAAACCTGCTTCACAAAGACATGTTCATGCCTTTTATGGTGGGAATATGCATGGTTATGTCTTAACCCTGATATGAAGATCTTTGGTCCAATGCCTCATTGCAATGCAACCAAAATGATTACATTCAGCATATGAAGAGCAGCAAATACTGCATCTGCCCAAAGGGTTACGAGCTCAATAGTCCACGGGTTGTGGAAGCCATGTTTTATGAGTGTGTACCTGTGATCATATCAGACAATTTCGTACCACCATTTTTAGAGGTGTTGAATTGGGAAGCATTTTCAGTGATTGTTGCAGAAAAGGATATTCCATACTTACAACAACATACTGCTTTCTTTCAATACTAA

mRNA sequence

ATGTCTCCTCCAGAAACTTATGTAGCGAGAAATCTTCTTAGAGATCTTGGAGGAAAACCTGCTTCACAAAGACATGTTCATGCCTTTTATGGTGGGAATATGCATGATCTTTGGTCCAATGCCTCATTGCAATGCAACCAAAATGATTACATTCAGCATATGAAGAGCAGCAAATACTGCATCTGCCCAAAGGGTTACGAGCTCAATAGTCCACGGGTTGTGGAAGCCATGTTTTATGAGTGTGTACCTGTGATCATATCAGACAATTTCGTACCACCATTTTTAGAGGTGTTGAATTGGGAAGCATTTTCAGTGATTGTTGCAGAAAAGGATATTCCATACTTACAACAACATACTGCTTTCTTTCAATACTAA

Coding sequence (CDS)

ATGTCTCCTCCAGAAACTTATGTAGCGAGAAATCTTCTTAGAGATCTTGGAGGAAAACCTGCTTCACAAAGACATGTTCATGCCTTTTATGGTGGGAATATGCATGATCTTTGGTCCAATGCCTCATTGCAATGCAACCAAAATGATTACATTCAGCATATGAAGAGCAGCAAATACTGCATCTGCCCAAAGGGTTACGAGCTCAATAGTCCACGGGTTGTGGAAGCCATGTTTTATGAGTGTGTACCTGTGATCATATCAGACAATTTCGTACCACCATTTTTAGAGGTGTTGAATTGGGAAGCATTTTCAGTGATTGTTGCAGAAAAGGATATTCCATACTTACAACAACATACTGCTTTCTTTCAATACTAA

Protein sequence

MSPPETYVARNLLRDLGGKPASQRHVHAFYGGNMHDLWSNASLQCNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVAEKDIPYLQQHTAFFQY

Homology

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BLAST of Carg12228 vs. NCBI nr
Match: KAG7021881.1 (putative glycosyltransferase, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.7 bits (683), Expect = 5.0e-68
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MSPPETYVARNLLRDLGGKPASQRHVHAFYGGNMHDLWSNASLQCNQNDYIQHMKSSKYC 60
           MSPPETYVARNLLRDLGGKPASQRHVHAFYGGNMHDLWSNASLQCNQNDYIQHMKSSKYC
Sbjct: 1   MSPPETYVARNLLRDLGGKPASQRHVHAFYGGNMHDLWSNASLQCNQNDYIQHMKSSKYC 60

Query: 61  ICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVAEKDIPYLQQHTA 120
           ICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVAEKDIPYLQQHTA
Sbjct: 61  ICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVAEKDIPYLQQHTA 120

Query: 121 FFQY 125
           FFQY
Sbjct: 121 FFQY 124

[Close]

BLAST of Carg12228 vs. NCBI nr
Match: KAG6589943.1 (putative glycosyltransferase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 178.7 bits (452), Expect = 3.1e-41
Identity = 92/137 (67.15%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 458 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 517

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 518 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 577

[Close]

BLAST of Carg12228 vs. NCBI nr
Match: XP_023516188.1 (probable glycosyltransferase At5g03795 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.7 bits (452), Expect = 3.1e-41
Identity = 92/137 (67.15%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 479 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 538

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 539 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 598

[Close]

BLAST of Carg12228 vs. NCBI nr
Match: XP_022961026.1 (probable glycosyltransferase At5g03795 [Cucurbita moschata])

HSP 1 Score: 178.7 bits (452), Expect = 3.1e-41
Identity = 92/137 (67.15%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 479 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 538

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 539 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 598

[Close]

BLAST of Carg12228 vs. NCBI nr
Match: XP_022987636.1 (probable glycosyltransferase At5g03795 [Cucurbita maxima])

HSP 1 Score: 178.7 bits (452), Expect = 3.1e-41
Identity = 92/137 (67.15%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 484 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 543

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 544 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 603

[Close]

BLAST of Carg12228 vs. ExPASy Swiss-Prot
Match: Q9FFN2 (Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana OX=3702 GN=At5g03795 PE=3 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-21
Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 0


Query: 1   MSPPETYVARNLLRDL-GGKPASQRHVHAFYGGNMH--------DLWSNASLQCNQNDYI 60
           +S PE  +    L  L GG   S R + AF+ G +H          W N       + Y+
Sbjct: 331 VSIPEINLRTGSLTGLVGGPSPSSRPILAFFAGGVHGPVRPVLLQHWENKDNDIRVHKYL 390

Query: 61  QH-------MKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFS 117
                    M++SK+CICP GYE+ SPR+VEA++  CVPV+I+  +VPPF +VLNW +FS
Sbjct: 391 PRGTSYSDMMRNSKFCICPSGYEVASPRIVEALYSGCVPVLINSGYVPPFSDVLNWRSFS 450

[Close]

BLAST of Carg12228 vs. ExPASy Swiss-Prot
Match: Q3E7Q9 (Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana OX=3702 GN=At5g25310 PE=3 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 4.9e-18
Identity = 39/69 (56.52%), Postives = 53/69 (76.81%), Query Frame = 0


Query: 49  DYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVA 108
           +Y   M+SSK+C CP GYE+ SPRV+EA++ EC+PVI+S NFV PF +VL WE FSV+V 
Sbjct: 359 NYYDFMRSSKFCFCPSGYEVASPRVIEAIYSECIPVILSVNFVLPFTDVLRWETFSVLVD 418

Query: 109 EKDIPYLQQ 118
             +IP L++
Sbjct: 419 VSEIPRLKE 427

[Close]

BLAST of Carg12228 vs. ExPASy Swiss-Prot
Match: Q9SSE8 (Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana OX=3702 GN=At3g07620 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.4e-17
Identity = 39/69 (56.52%), Postives = 55/69 (79.71%), Query Frame = 0


Query: 49  DYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVA 108
           DY + M+ S++CICP G+E+ SPRV EA++  CVPV+IS+N+V PF +VLNWE FSV V+
Sbjct: 349 DYTEMMRKSRFCICPSGHEVASPRVPEAIYSGCVPVLISENYVLPFSDVLNWEKFSVSVS 408

Query: 109 EKDIPYLQQ 118
            K+IP L++
Sbjct: 409 VKEIPELKR 417

[Close]

BLAST of Carg12228 vs. ExPASy Swiss-Prot
Match: Q94AA9 (Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana OX=3702 GN=XGD1 PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-15
Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 1   MSPPETYVARNLL-RDLGGKPASQRHVHAFYGGNMHD-----LWSNASLQCNQ------- 60
           +S PE Y+ +  L     GK    R + AF+ G  H      L+ +     N+       
Sbjct: 314 VSIPEIYLPKGKLGPSFLGKSPRVRSILAFFAGRSHGEIRKILFQHWKEMDNEVQVYDRL 373

Query: 61  ---NDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFS 120
               DY + M  SK+C+CP G+E+ SPR VEA++  CVPVIISDN+  PF +VLNW++FS
Sbjct: 374 PPGKDYTKTMGMSKFCLCPSGWEVASPREVEAIYAGCVPVIISDNYSLPFSDVLNWDSFS 433

Query: 121 V---IVAEKDIPYLQQHTAFFQY 125
           +   +   K+I  + Q  +  +Y
Sbjct: 434 IQIPVSRIKEIKTILQSVSLVRY 456

[Close]

BLAST of Carg12228 vs. ExPASy Swiss-Prot
Match: Q9LFP3 (Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana OX=3702 GN=At5g11130/At5g11120 PE=3 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-14
Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = 0


Query: 18  GKPASQRHVHAFYGGNMH----------------DLWSNASLQCNQNDYIQHMKSSKYCI 77
           G+P   R + AF+ G  H                D+    +L    N Y + M  +K+C+
Sbjct: 310 GEPPQNRKLLAFFAGGSHGDVRKILFQHWKEKDKDVLVYENLPKTMN-YTKMMDKAKFCL 369

Query: 78  CPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEAFSVIVAEKDIPYLQQ 118
           CP G+E+ SPR+VE+++  CVPVII+D +V PF +VLNW+ FSV +    +P +++
Sbjct: 370 CPSGWEVASPRIVESLYSGCVPVIIADYYVLPFSDVLNWKTFSVHIPISKMPDIKK 424

[Close]

BLAST of Carg12228 vs. ExPASy TrEMBL
Match: A0A6J1JEU9 (probable glycosyltransferase At5g03795 OS=Cucurbita maxima OX=3661 GN=LOC111485134 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 92/137 (67.15%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 484 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 543

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 544 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 603

[Close]

BLAST of Carg12228 vs. ExPASy TrEMBL
Match: A0A6J1H980 (probable glycosyltransferase At5g03795 OS=Cucurbita moschata OX=3662 GN=LOC111461655 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 92/137 (67.15%), Postives = 103/137 (75.18%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 479 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 538

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 539 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 598

[Close]

BLAST of Carg12228 vs. ExPASy TrEMBL
Match: A0A5D3BQ48 (Putative glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00210 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.3e-41
Identity = 92/137 (67.15%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 473 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 532

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 533 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 592

[Close]

BLAST of Carg12228 vs. ExPASy TrEMBL
Match: A0A5A7V6N9 (Putative glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001640 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.3e-41
Identity = 92/137 (67.15%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 473 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 532

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 533 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 592

[Close]

BLAST of Carg12228 vs. ExPASy TrEMBL
Match: A0A0A0LU64 (Exostosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G364960 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.3e-41
Identity = 92/137 (67.15%), Postives = 102/137 (74.45%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMH--------DLWSNASLQ------ 60
           +S PETYV  ARN LRDLGGKPASQRH+ AFY GNMH          W + +        
Sbjct: 473 VSLPETYVRSARNPLRDLGGKPASQRHILAFYAGNMHGYVRPILLKYWKDKNPDMKIFGP 532

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YIQHMKSSKYCICPKGYE+NSPRVVEA+FYECVPVIISDNFVPPF EVL+
Sbjct: 533 MPPGVASKMNYIQHMKSSKYCICPKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLD 592

[Close]

BLAST of Carg12228 vs. TAIR 10
Match: AT5G19670.1 (Exostosin family protein )

HSP 1 Score: 161.0 bits (406), Expect = 6.1e-40
Identity = 84/137 (61.31%), Postives = 96/137 (70.07%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLGGKPASQRHVHAFYGGNMHDLWSNASLQ-------------- 60
           +S PETYV  A+N LRDLGGKP SQR   AFY G+MH       LQ              
Sbjct: 419 ISLPETYVRAAKNPLRDLGGKPPSQRRTLAFYAGSMHGYLRQILLQHWKDKDPDMKIFGR 478

Query: 61  -----CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLN 117
                 ++ +YI+ MKSSKYCICPKGYE+NSPRVVE++FYECVPVIISDNFVPPF EVL+
Sbjct: 479 MPFGVASKMNYIEQMKSSKYCICPKGYEVNSPRVVESIFYECVPVIISDNFVPPFFEVLD 538

[Close]

BLAST of Carg12228 vs. TAIR 10
Match: AT4G32790.1 (Exostosin family protein )

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35
Identity = 75/134 (55.97%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 4   PET--YVARNLLRDLGGKPASQRHVHAFYGGNMH-------------------DLWSNAS 63
           PET   V R  LR LGGKP SQR + AF+ G MH                    ++S   
Sbjct: 408 PETTILVPRRPLRALGGKPVSQRQILAFFAGGMHGYLRPLLLQNWGGNRDPDMKIFSEIP 467

Query: 64  LQCNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVLNWEA 117
               +  Y+++MKSSKYCICPKG+E+NSPRVVEA+FYECVPVIISDNFVPPF EVLNWE+
Sbjct: 468 KSKGKKSYMEYMKSSKYCICPKGHEVNSPRVVEALFYECVPVIISDNFVPPFFEVLNWES 527

[Close]

BLAST of Carg12228 vs. TAIR 10
Match: AT5G25820.1 (Exostosin family protein )

HSP 1 Score: 131.0 bits (328), Expect = 6.8e-31
Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 0


Query: 2   SPPETYV--ARNLLRDLGGKPASQRHVHAFYGGN---------MHDLWSN---------- 61
           S PET+V   +  L ++GGK A+QR + AF+ G          +   W N          
Sbjct: 464 SLPETFVRDPKKPLSNMGGKSANQRPILAFFAGKPDHGYLRPILLSYWGNNKDPDLKIFG 523

Query: 62  --ASLQCNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVL 118
                + N+N Y+Q MK+SKYCIC KG+E+NSPRVVEA+FY+CVPVIISDNFVPPF EVL
Sbjct: 524 KLPRTKGNKN-YLQFMKTSKYCICAKGFEVNSPRVVEAIFYDCVPVIISDNFVPPFFEVL 583

[Close]

BLAST of Carg12228 vs. TAIR 10
Match: AT4G16745.1 (Exostosin family protein )

HSP 1 Score: 127.1 bits (318), Expect = 9.8e-30
Identity = 66/139 (47.48%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLG-GKPASQRHVHAFYGGNMHDL--------WSNASLQ----- 60
           +S PET +  A   LR++G G   SQR + AF+ GN+H          W N         
Sbjct: 342 VSLPETSIRNAGRPLRNIGNGNRVSQRPILAFFAGNLHGRVRPKLLKHWRNKDEDMKIYG 401

Query: 61  ------CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVL 118
                   +  Y+QHMKSSKYC+CP GYE+NSPR+VEA++YECVPV+I+DNF+ PF +VL
Sbjct: 402 PLPHNVARKMTYVQHMKSSKYCLCPMGYEVNSPRIVEAIYYECVPVVIADNFMLPFSDVL 461

[Close]

BLAST of Carg12228 vs. TAIR 10
Match: AT4G16745.2 (Exostosin family protein )

HSP 1 Score: 127.1 bits (318), Expect = 9.8e-30
Identity = 66/139 (47.48%), Postives = 89/139 (64.03%), Query Frame = 0


Query: 1   MSPPETYV--ARNLLRDLG-GKPASQRHVHAFYGGNMHDL--------WSNASLQ----- 60
           +S PET +  A   LR++G G   SQR + AF+ GN+H          W N         
Sbjct: 342 VSLPETSIRNAGRPLRNIGNGNRVSQRPILAFFAGNLHGRVRPKLLKHWRNKDEDMKIYG 401

Query: 61  ------CNQNDYIQHMKSSKYCICPKGYELNSPRVVEAMFYECVPVIISDNFVPPFLEVL 118
                   +  Y+QHMKSSKYC+CP GYE+NSPR+VEA++YECVPV+I+DNF+ PF +VL
Sbjct: 402 PLPHNVARKMTYVQHMKSSKYCLCPMGYEVNSPRIVEAIYYECVPVVIADNFMLPFSDVL 461

The following BLAST results are available for this feature:

BLAST of Carg12228 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021881.1	5.0e-68	100.00	putative glycosyltransferase, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6589943.1	3.1e-41	67.15	putative glycosyltransferase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516188.1	3.1e-41	67.15	probable glycosyltransferase At5g03795 [Cucurbita pepo subsp. pepo]	[more]
XP_022961026.1	3.1e-41	67.15	probable glycosyltransferase At5g03795 [Cucurbita moschata]	[more]
XP_022987636.1	3.1e-41	67.15	probable glycosyltransferase At5g03795 [Cucurbita maxima]	[more]

BLAST of Carg12228 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFN2	4.8e-21	40.91	Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana OX=3702 GN=At5g03...	[more]
Q3E7Q9	4.9e-18	56.52	Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana OX=3702 GN=At5g25...	[more]
Q9SSE8	1.4e-17	56.52	Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana OX=3702 GN=At3g07...	[more]
Q94AA9	1.3e-15	35.66	Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9LFP3	2.5e-14	35.34	Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana OX=3702 GN=At5g11...	[more]

BLAST of Carg12228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEU9	1.5e-41	67.15	probable glycosyltransferase At5g03795 OS=Cucurbita maxima OX=3661 GN=LOC1114851...	[more]
A0A6J1H980	1.5e-41	67.15	probable glycosyltransferase At5g03795 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A5D3BQ48	4.3e-41	67.15	Putative glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7V6N9	4.3e-41	67.15	Putative glycosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0LU64	4.3e-41	67.15	Exostosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G364960 P...	[more]

BLAST of Carg12228 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19670.1	6.1e-40	61.31	Exostosin family protein	[more]
AT4G32790.1	1.2e-35	55.97	Exostosin family protein	[more]
AT5G25820.1	6.8e-31	49.64	Exostosin family protein	[more]
AT4G16745.1	9.8e-30	47.48	Exostosin family protein	[more]
AT4G16745.2	9.8e-30	47.48	Exostosin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040911	Exostosin, GT47 domain	PFAM	PF03016	Exostosin	coord: 12..115 e-value: 9.3E-26 score: 90.7
None	No IPR available	PANTHER	PTHR11062:SF108	EXOSTOSIN FAMILY PROTEIN	coord: 2..116
IPR004263	Exostosin-like	PANTHER	PTHR11062	EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED	coord: 2..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12228-RA	Carg12228-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016020	membrane
molecular_function	GO:0016757	glycosyltransferase activity