Carg12219 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12219
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SPEAR1-like
Location	Carg_Chr11: 2768100 .. 2769301 (+)
RNA-Seq Expression	Carg12219
Synteny	Carg12219

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGTGGTTATTTTGGGGAACCGGGTTTCGGGAATGAAAGAGGGAGTGGATTGTTGTCGTCTTCTTCGTCGTCGCCGTCGTCGTCTTCGTCGAGAAGAGGGAGGAAAGGAGGTTCTGATAAGCAACCAAGGCAACCTCAAAGAGGGCTTGGAGTTGCTCAGCTTGAGAAGATCAGATTGCATGGTGAAATTGCTGCTTTTCATCCCACTTCTTACACCTTCAATAATGTAACTCTTTTCTCTCTTCTTTCTTTTCTTTTATTTTATTTCGACTGAGTTATGTTTAAATTGACTAAATAATTATCGATTTAATCAGGATCAAGAGGTATCGAGAGTGCAGACGGGATATTCGTCGGTACCCTCGTCTACTTCTTCCTCACCCTCTTATGGCTTCCCGTCCAACGTTATGGTACGTAGTTTCGTTTGATGATTTTATAAGTTATTATTAAAATTGGGGTATGTTTAGATTATGAAGAGTGATTTTAATTATGTATTAATTTCTTGTGTGGTGCTGTTAGGGCAAACCCTAGAATTTGAAACAAATTTAGGATCAATTTTCTTAAACTCTAATCAATATCTAATAAAAATGGGCTCTTCAAACTCTTTTCATCATAACAATTTATTAATTTATTACTAAGAATTAAGGTTGTTAATCCACAAAATTACTTGAAAAATTATCTGTTGATGATGGTAATTAAGTAGGTTTAAGTGATTAAGGATTGTATGTGATGGGCAATGCAGATGGGGTTTGGAGAATATGAAAGAAGAAACCTTAGAGATGGGGATTCTCAGTACAGCACAGCAGCAAGGTACTATATTCACTTAATTACATTGTTAATCAAGATATAGTTTTTACTTTACTTAATTAAATAACATTTATAGGAAAATTAAGCTGTTTATTGCTTGATTGGGGAACAGATGGGATCCAAGCAATGGTGGGATATTAGAGGCTCAGCATTTTGCACAACCAAACATGCCATCTTATCTTCAAAATCCACAAGCAGAGGTAACTATGCTGTGTTCTGAATGTTTTTATTTTGGAACGTTTTGGTCTCGTTTGATAACCATTTAGTTGTTTTGTGCAGTGGACACAGACCCGAAGGAGCAAACGACAGGAGAGGAGTGGACGAATGAGTCAGAATTCGGAAGCATGTGAGAGCCAAGAACTGGACTTGGAGCTTAGACTCTCAATAATCTAG

mRNA sequence

ATGGGGAGTGGTTATTTTGGGGAACCGGGTTTCGGGAATGAAAGAGGGAGTGGATTGTTGTCGTCTTCTTCGTCGTCGCCGTCGTCGTCTTCGTCGAGAAGAGGGAGGAAAGGAGGTTCTGATAAGCAACCAAGGCAACCTCAAAGAGGGCTTGGAGTTGCTCAGCTTGAGAAGATCAGATTGCATGGTGAAATTGCTGCTTTTCATCCCACTTCTTACACCTTCAATAATGATCAAGAGGTATCGAGAGTGCAGACGGGATATTCGTCGGTACCCTCGTCTACTTCTTCCTCACCCTCTTATGGCTTCCCGTCCAACGTTATGATGGGGTTTGGAGAATATGAAAGAAGAAACCTTAGAGATGGGGATTCTCAGTACAGCACAGCAGCAAGATGGGATCCAAGCAATGGTGGGATATTAGAGGCTCAGCATTTTGCACAACCAAACATGCCATCTTATCTTCAAAATCCACAAGCAGAGTGGACACAGACCCGAAGGAGCAAACGACAGGAGAGGAGTGGACGAATGAGTCAGAATTCGGAAGCATGTGAGAGCCAAGAACTGGACTTGGAGCTTAGACTCTCAATAATCTAG

Coding sequence (CDS)

ATGGGGAGTGGTTATTTTGGGGAACCGGGTTTCGGGAATGAAAGAGGGAGTGGATTGTTGTCGTCTTCTTCGTCGTCGCCGTCGTCGTCTTCGTCGAGAAGAGGGAGGAAAGGAGGTTCTGATAAGCAACCAAGGCAACCTCAAAGAGGGCTTGGAGTTGCTCAGCTTGAGAAGATCAGATTGCATGGTGAAATTGCTGCTTTTCATCCCACTTCTTACACCTTCAATAATGATCAAGAGGTATCGAGAGTGCAGACGGGATATTCGTCGGTACCCTCGTCTACTTCTTCCTCACCCTCTTATGGCTTCCCGTCCAACGTTATGATGGGGTTTGGAGAATATGAAAGAAGAAACCTTAGAGATGGGGATTCTCAGTACAGCACAGCAGCAAGATGGGATCCAAGCAATGGTGGGATATTAGAGGCTCAGCATTTTGCACAACCAAACATGCCATCTTATCTTCAAAATCCACAAGCAGAGTGGACACAGACCCGAAGGAGCAAACGACAGGAGAGGAGTGGACGAATGAGTCAGAATTCGGAAGCATGTGAGAGCCAAGAACTGGACTTGGAGCTTAGACTCTCAATAATCTAG

Protein sequence

MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIRLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLRDGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQNSEACESQELDLELRLSII

Homology

[Close]

BLAST of Carg12219 vs. NCBI nr
Match: KAG6587980.1 (Protein SPEAR1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021872.1 Protein SPEAR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 379.0 bits (972), Expect = 2.4e-101
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60
           MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60

Query: 61  LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR 120
           LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR
Sbjct: 61  LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR 120

Query: 121 DGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQNS 180
           DGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQNS
Sbjct: 121 DGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQNS 180

Query: 181 EACESQELDLELRLSII 198
           EACESQELDLELRLSII
Sbjct: 181 EACESQELDLELRLSII 197

[Close]

BLAST of Carg12219 vs. NCBI nr
Match: XP_022933519.1 (protein SPEAR1-like [Cucurbita moschata])

HSP 1 Score: 377.1 bits (967), Expect = 9.3e-101
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60
           MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60

Query: 61  LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR 120
           LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR
Sbjct: 61  LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR 120

Query: 121 DGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQNS 180
           DGDSQYSTAARWDPSNGGILEAQHFAQPNMP YLQNPQAEWTQTRRSKRQERSGRMSQNS
Sbjct: 121 DGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQNS 180

Query: 181 EACESQELDLELRLSII 198
           EACESQELDLELRLSII
Sbjct: 181 EACESQELDLELRLSII 197

[Close]

BLAST of Carg12219 vs. NCBI nr
Match: XP_023531219.1 (protein SPEAR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 2.3e-99
Identity = 196/198 (98.99%), Postives = 196/198 (98.99%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSS-RRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSS RRGRKGGSDKQPRQPQRGLGVAQLEKI
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSTRRGRKGGSDKQPRQPQRGLGVAQLEKI 60

Query: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120
           RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL
Sbjct: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120

Query: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQN 180
           RDGDSQYSTAARWDPSNGGILEAQHFAQPNMP YLQNPQAEWTQTRRSKRQERSGRMSQN
Sbjct: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQN 180

Query: 181 SEACESQELDLELRLSII 198
           SEACESQELDLELRLSII
Sbjct: 181 SEACESQELDLELRLSII 198

[Close]

BLAST of Carg12219 vs. NCBI nr
Match: XP_023007409.1 (protein SPEAR1-like [Cucurbita maxima])

HSP 1 Score: 363.2 bits (931), Expect = 1.4e-96
Identity = 191/197 (96.95%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60
           MGSGYFGEPGFGNERGSGLLSSSS   SSS SRRGRKGGSDKQPRQPQRGLGVAQLEKIR
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSS---SSSPSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60

Query: 61  LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR 120
           LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR
Sbjct: 61  LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR 120

Query: 121 DGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQNS 180
           DGDSQYSTAARWDPSNGGILEAQHFAQPNMP YLQNPQ EWTQTRRSKRQERSGRMSQNS
Sbjct: 121 DGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQEEWTQTRRSKRQERSGRMSQNS 180

Query: 181 EACESQELDLELRLSII 198
           EACESQELDLELRLSII
Sbjct: 181 EACESQELDLELRLSII 194

[Close]

BLAST of Carg12219 vs. NCBI nr
Match: XP_038878298.1 (protein SPEAR3-like [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.4e-80
Identity = 168/200 (84.00%), Postives = 180/200 (90.00%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60
           MGSGYFGEP  GN    G  +SSSSSP   SSRRG+KGGSDKQPRQPQRGLGVAQLEKIR
Sbjct: 1   MGSGYFGEPSLGNNERGG--ASSSSSP--LSSRRGKKGGSDKQPRQPQRGLGVAQLEKIR 60

Query: 61  LHGEIAA--FHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRN 120
           LHGEIA+  FH TSYTF NDQEV+RVQTGY+SVPSSTSSSPSYGFPSN+MMGFGEYERRN
Sbjct: 61  LHGEIASAGFHHTSYTFTNDQEVARVQTGYASVPSSTSSSPSYGFPSNIMMGFGEYERRN 120

Query: 121 LRDGDSQYSTAARWDP-SNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMS 180
           LRDGDSQYSTAARWDP +NGGILE+QH+AQPNM  YL+NPQAEWTQ+RRSKRQERSG M 
Sbjct: 121 LRDGDSQYSTAARWDPNNNGGILESQHYAQPNMTCYLENPQAEWTQSRRSKRQERSGNMG 180

Query: 181 QNSEACESQELDLELRLSII 198
           QNSEACESQ+LDLELRLSII
Sbjct: 181 QNSEACESQDLDLELRLSII 196

[Close]

BLAST of Carg12219 vs. ExPASy Swiss-Prot
Match: Q6IDB0 (Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.8e-28
Identity = 100/214 (46.73%), Postives = 122/214 (57.01%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGR-KGGSDKQPRQPQRGLGVAQLEKI 60
           MGS +FG P  G     G  SSS +S SSS ++RG+ K GSDK P+QPQRGLGVAQLEKI
Sbjct: 1   MGSSFFGRPKMG-----GSSSSSPTSSSSSPAKRGKNKNGSDK-PKQPQRGLGVAQLEKI 60

Query: 61  RLHGE--------IAAFHPTSYTFNNDQEVSRVQTGYSSVPSST------SSSP---SYG 120
           RLHGE          ++HP++Y     QE  R+Q GY S+PSS+      SSSP    YG
Sbjct: 61  RLHGEYNCNSFNTYPSYHPSTY-----QEDVRIQGGYPSIPSSSPSFSYASSSPPPAPYG 120

Query: 121 FPSNVMMGFG--EYERRNLRDGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAE 180
           F  N+MM     +YER  +R GDSQ   A  W+PS  GILE+QHF +PN   +       
Sbjct: 121 FHPNMMMNANNDQYERTTIRYGDSQPHRAPSWNPSY-GILESQHFVEPNTTRHF------ 180

Query: 181 WTQTRRSKRQERSGRMSQNSEACESQELDLELRL 195
                  +R    G   QN E  E+ ELDLELRL
Sbjct: 181 ---LHEDQRNISLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Carg12219 vs. ExPASy Swiss-Prot
Match: Q84X40 (Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-25
Identity = 97/204 (47.55%), Postives = 126/204 (61.76%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSS-SSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGS +FG P   N  GS   SSS +SS SS ++RRG+K GS+K P+QPQRGLGVAQLEKI
Sbjct: 1   MGSTFFGRP---NVVGSSPPSSSPTSSSSSPATRRGKKNGSEK-PKQPQRGLGVAQLEKI 60

Query: 61  RLHGEIA-----AFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGF--G 120
           RLHGE++     +++P+ Y     QE  R+Q GYSS+PS   SS  YGF  N+MMG    
Sbjct: 61  RLHGEMSCNSFNSYNPSLY----PQEDVRMQGGYSSIPS--QSSAPYGFYPNMMMGVHRD 120

Query: 121 EYERRNLRDGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQER 180
           +Y+R  +            W+PS  GILE+QH  +PN+  +  N     T TRRSK    
Sbjct: 121 QYDRATM-----------SWNPSY-GILESQHSLEPNITRHFLNEDPSST-TRRSK---S 178

Query: 181 SGRMSQNSEACESQELDLELRLSI 197
            G   Q+S + E+QE+DLELRLS+
Sbjct: 181 LGSGIQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Carg12219 vs. ExPASy TrEMBL
Match: A0A6J1EZZ7 (protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111440921 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.5e-101
Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60
           MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60

Query: 61  LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR 120
           LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR
Sbjct: 61  LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR 120

Query: 121 DGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQNS 180
           DGDSQYSTAARWDPSNGGILEAQHFAQPNMP YLQNPQAEWTQTRRSKRQERSGRMSQNS
Sbjct: 121 DGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQAEWTQTRRSKRQERSGRMSQNS 180

Query: 181 EACESQELDLELRLSII 198
           EACESQELDLELRLSII
Sbjct: 181 EACESQELDLELRLSII 197

[Close]

BLAST of Carg12219 vs. ExPASy TrEMBL
Match: A0A6J1L4V3 (protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111499911 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 6.7e-97
Identity = 191/197 (96.95%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60
           MGSGYFGEPGFGNERGSGLLSSSS   SSS SRRGRKGGSDKQPRQPQRGLGVAQLEKIR
Sbjct: 1   MGSGYFGEPGFGNERGSGLLSSSS---SSSPSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60

Query: 61  LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR 120
           LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR
Sbjct: 61  LHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNLR 120

Query: 121 DGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQNS 180
           DGDSQYSTAARWDPSNGGILEAQHFAQPNMP YLQNPQ EWTQTRRSKRQERSGRMSQNS
Sbjct: 121 DGDSQYSTAARWDPSNGGILEAQHFAQPNMPCYLQNPQEEWTQTRRSKRQERSGRMSQNS 180

Query: 181 EACESQELDLELRLSII 198
           EACESQELDLELRLSII
Sbjct: 181 EACESQELDLELRLSII 194

[Close]

BLAST of Carg12219 vs. ExPASy TrEMBL
Match: A0A5A7VAB9 (Protein SPEAR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001280 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 173/203 (85.22%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MGSGYFGEPGFG--NERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEK 60
           MGSGYFGEP  G  NERGSG  SSSSSSP  SSSRRG+KGGSDKQPRQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEPSLGNNNERGSG--SSSSSSP--SSSRRGKKGGSDKQPRQPQRGLGVAQLEK 60

Query: 61  IRLHGEIAA--FHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYER 120
           IRLHGEIA+  FHPTSY F NDQE++RVQTGY+SVPSSTSSSPSYGFPSNVMMGFGEYER
Sbjct: 61  IRLHGEIASAGFHPTSYAFTNDQEIARVQTGYASVPSSTSSSPSYGFPSNVMMGFGEYER 120

Query: 121 RNLRDGDSQYSTAARWDPS-NGGILEAQHFAQPNMPSYLQNPQA-EWTQTRRSKRQERSG 180
           R+LRDGDSQYST  RWDPS NGGILE+QHFAQPNM  YLQNPQA +WTQ+RRSKRQERSG
Sbjct: 121 RSLRDGDSQYST--RWDPSNNGGILESQHFAQPNMTCYLQNPQADQWTQSRRSKRQERSG 180

Query: 181 RMSQNSEACESQELDLELRLSII 198
            M QNSE CESQELDLELRLSII
Sbjct: 181 NMGQNSEGCESQELDLELRLSII 197

[Close]

BLAST of Carg12219 vs. ExPASy TrEMBL
Match: A0A1S3CHQ6 (protein SPEAR1-like OS=Cucumis melo OX=3656 GN=LOC103501036 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.3e-79
Identity = 173/203 (85.22%), Postives = 182/203 (89.66%), Query Frame = 0


Query: 1   MGSGYFGEPGFG--NERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEK 60
           MGSGYFGEP  G  NERGSG  SSSSSSP  SSSRRG+KGGSDKQPRQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEPSLGNNNERGSG--SSSSSSP--SSSRRGKKGGSDKQPRQPQRGLGVAQLEK 60

Query: 61  IRLHGEIAA--FHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYER 120
           IRLHGEIA+  FHPTSY F NDQE++RVQTGY+SVPSSTSSSPSYGFPSNVMMGFGEYER
Sbjct: 61  IRLHGEIASAGFHPTSYAFTNDQEIARVQTGYASVPSSTSSSPSYGFPSNVMMGFGEYER 120

Query: 121 RNLRDGDSQYSTAARWDPS-NGGILEAQHFAQPNMPSYLQNPQA-EWTQTRRSKRQERSG 180
           R+LRDGDSQYST  RWDPS NGGILE+QHFAQPNM  YLQNPQA +WTQ+RRSKRQERSG
Sbjct: 121 RSLRDGDSQYST--RWDPSNNGGILESQHFAQPNMTCYLQNPQADQWTQSRRSKRQERSG 180

Query: 181 RMSQNSEACESQELDLELRLSII 198
            M QNSE CESQELDLELRLSII
Sbjct: 181 NMGQNSEGCESQELDLELRLSII 197

[Close]

BLAST of Carg12219 vs. ExPASy TrEMBL
Match: A0A0A0LW93 (SPOROCYTELESS-like EAR-containing protein 3 OS=Cucumis sativus OX=3659 GN=SPEAR3 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.7e-79
Identity = 168/201 (83.58%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKIR 60
           MGSGYFGEP  GN    G  SSSSSSP   SSRRG+KGGSDKQPRQPQRGLGVAQLEKIR
Sbjct: 1   MGSGYFGEPSLGNNNDRGSGSSSSSSP---SSRRGKKGGSDKQPRQPQRGLGVAQLEKIR 60

Query: 61  LHGEIAA--FHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRN 120
           LHGEIA+  FHPTSYTF NDQE++RVQTGY SVPSSTSSSPSYGFPSN+MMGFGEYERRN
Sbjct: 61  LHGEIASAGFHPTSYTFTNDQEIARVQTGYGSVPSSTSSSPSYGFPSNIMMGFGEYERRN 120

Query: 121 LRDGDSQYSTAARWDPS-NGGILEAQHFAQPNMPSYLQNPQA-EWTQTRRSKRQERSGRM 180
           LRDGDSQYST  RWDPS NGGILE+QHFAQPNM  YLQNPQA +WTQ+RRSKRQERSG M
Sbjct: 121 LRDGDSQYST--RWDPSNNGGILESQHFAQPNMTCYLQNPQADQWTQSRRSKRQERSGNM 180

Query: 181 SQNSEACESQELDLELRLSII 198
            QN E CESQELDLELRLSII
Sbjct: 181 GQNPEGCESQELDLELRLSII 196

[Close]

BLAST of Carg12219 vs. TAIR 10
Match: AT4G28840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20080.1); Has 71 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-29
Identity = 100/214 (46.73%), Postives = 122/214 (57.01%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSSSSSPSSSSSRRGR-KGGSDKQPRQPQRGLGVAQLEKI 60
           MGS +FG P  G     G  SSS +S SSS ++RG+ K GSDK P+QPQRGLGVAQLEKI
Sbjct: 1   MGSSFFGRPKMG-----GSSSSSPTSSSSSPAKRGKNKNGSDK-PKQPQRGLGVAQLEKI 60

Query: 61  RLHGE--------IAAFHPTSYTFNNDQEVSRVQTGYSSVPSST------SSSP---SYG 120
           RLHGE          ++HP++Y     QE  R+Q GY S+PSS+      SSSP    YG
Sbjct: 61  RLHGEYNCNSFNTYPSYHPSTY-----QEDVRIQGGYPSIPSSSPSFSYASSSPPPAPYG 120

Query: 121 FPSNVMMGFG--EYERRNLRDGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAE 180
           F  N+MM     +YER  +R GDSQ   A  W+PS  GILE+QHF +PN   +       
Sbjct: 121 FHPNMMMNANNDQYERTTIRYGDSQPHRAPSWNPSY-GILESQHFVEPNTTRHF------ 180

Query: 181 WTQTRRSKRQERSGRMSQNSEACESQELDLELRL 195
                  +R    G   QN E  E+ ELDLELRL
Sbjct: 181 ---LHEDQRNISLGSGIQNFETSEANELDLELRL 193

[Close]

BLAST of Carg12219 vs. TAIR 10
Match: AT2G20080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 97/204 (47.55%), Postives = 126/204 (61.76%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSS-SSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGS +FG P   N  GS   SSS +SS SS ++RRG+K GS+K P+QPQRGLGVAQLEKI
Sbjct: 1   MGSTFFGRP---NVVGSSPPSSSPTSSSSSPATRRGKKNGSEK-PKQPQRGLGVAQLEKI 60

Query: 61  RLHGEIA-----AFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGF--G 120
           RLHGE++     +++P+ Y     QE  R+Q GYSS+PS   SS  YGF  N+MMG    
Sbjct: 61  RLHGEMSCNSFNSYNPSLY----PQEDVRMQGGYSSIPS--QSSAPYGFYPNMMMGVHRD 120

Query: 121 EYERRNLRDGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQER 180
           +Y+R  +            W+PS  GILE+QH  +PN+  +  N     T TRRSK    
Sbjct: 121 QYDRATM-----------SWNPSY-GILESQHSLEPNITRHFLNEDPSST-TRRSK---S 178

Query: 181 SGRMSQNSEACESQELDLELRLSI 197
            G   Q+S + E+QE+DLELRLS+
Sbjct: 181 LGSGIQHSGSSENQEVDLELRLSL 178

[Close]

BLAST of Carg12219 vs. TAIR 10
Match: AT2G20080.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-16
Identity = 81/197 (41.12%), Postives = 105/197 (53.30%), Query Frame = 0


Query: 1   MGSGYFGEPGFGNERGSGLLSSS-SSSPSSSSSRRGRKGGSDKQPRQPQRGLGVAQLEKI 60
           MGS +FG P   N  GS   SSS +SS SS ++RRG+K GS+K P+QPQRGLGVAQLEKI
Sbjct: 1   MGSTFFGRP---NVVGSSPPSSSPTSSSSSPATRRGKKNGSEK-PKQPQRGLGVAQLEKI 60

Query: 61  RLHGEIAAFHPTSYTFNNDQEVSRVQTGYSSVPSSTSSSPSYGFPSNVMMGFGEYERRNL 120
           RLHGE++     SY                    + S  P  G   +      +Y+R  +
Sbjct: 61  RLHGEMSCNSFNSY--------------------NPSLYPQMGVHRD------QYDRATM 120

Query: 121 RDGDSQYSTAARWDPSNGGILEAQHFAQPNMPSYLQNPQAEWTQTRRSKRQERSGRMSQN 180
                       W+PS  GILE+QH  +PN+  +  N     T TRRSK     G   Q+
Sbjct: 121 -----------SWNPSY-GILESQHSLEPNITRHFLNEDPSST-TRRSK---SLGSGIQH 151

Query: 181 SEACESQELDLELRLSI 197
           S + E+QE+DLELRLS+
Sbjct: 181 SGSSENQEVDLELRLSL 151

The following BLAST results are available for this feature:

BLAST of Carg12219 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587980.1	2.4e-101	100.00	Protein SPEAR1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021872.1 Pr...	[more]
XP_022933519.1	9.3e-101	99.49	protein SPEAR1-like [Cucurbita moschata]	[more]
XP_023531219.1	2.3e-99	98.99	protein SPEAR1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007409.1	1.4e-96	96.95	protein SPEAR1-like [Cucurbita maxima]	[more]
XP_038878298.1	1.4e-80	84.00	protein SPEAR3-like [Benincasa hispida]	[more]

BLAST of Carg12219 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IDB0	3.8e-28	46.73	Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1	[more]
Q84X40	1.7e-25	47.55	Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1	[more]

BLAST of Carg12219 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZZ7	4.5e-101	99.49	protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111440921 PE=4 SV=1	[more]
A0A6J1L4V3	6.7e-97	96.95	protein SPEAR1-like OS=Cucurbita maxima OX=3661 GN=LOC111499911 PE=4 SV=1	[more]
A0A5A7VAB9	1.3e-79	85.22	Protein SPEAR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G0...	[more]
A0A1S3CHQ6	1.3e-79	85.22	protein SPEAR1-like OS=Cucumis melo OX=3656 GN=LOC103501036 PE=4 SV=1	[more]
A0A0A0LW93	1.7e-79	83.58	SPOROCYTELESS-like EAR-containing protein 3 OS=Cucumis sativus OX=3659 GN=SPEAR3...	[more]

BLAST of Carg12219 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28840.1	2.7e-29	46.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.1	1.2e-26	47.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.2	1.2e-16	41.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..186
None	No IPR available	PANTHER	PTHR33388:SF18	PROTEIN SPEAR1	coord: 1..196
IPR040356	SPEAR family	PANTHER	PTHR33388	OS01G0212500 PROTEIN	coord: 1..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12219-RA	Carg12219-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity