Carg12215 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12215
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor bHLH68
Location	Carg_Chr11: 2741380 .. 2744229 (-)
RNA-Seq Expression	Carg12215
Synteny	Carg12215

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTAGCCTACTTATAGTTGGGTAGGAGGAAAATTGAGAGTTTTGTTCGGTAAGGCCGTGGTTGGCTCCCCCTCCATTTTTGTTCTGAAGAAGAAAAGAAGATCAAGGTGAGGAAGACATGAATAGAGGGGCGTTGCAGAGCTCAGTTATGCAGCAACAAATGATGGGCTCAGAAAACCCTAGCTGGTGGAATATGGTGAACAGTGGCAGCATTAGAACATCATCCACACAGCAATCTTCTCCCAATAATAATTCTCCTAATTTCCTTTTCCCTCACTCTTCCCTTCCCTTTCCTTCTAATTTCCTCTATGATTTTGCTCAAGACAAGGATCAGCTTCCAGAATCTTGGAGCCACCTTCTATTGTAAATCTCTCTCTTTTATCTTCTTCTTGTTTTTTTTTTTATAATTTAATTTATGTATTGTTTTAATGATTTGATTTGTGTTTGTTATAGGGGTGGTTTAGTGGGTGAAGATGATCAAAAGGGTTGTATGGGGGGAATGTTTCAAGGCAAGAAATTGGAAGATTGGGAAGAGGAGATTTTGAATACTAACACTACTACTCACCACCAACAACATGTTGATGTCAAGAAGGAGAACTCAGCTCATGCAACCTCCTGCGCCTATGTTTATGGACATGGTGGTAGCCGTGGCGGTGTCGATGGCAATAATTATCCTTCGTTGCCTCCGAAACAAAACTGGTCGTCTATCATACCGGTCTCGTCTCCTCAGTCATGTGTTACAAGTTTCAGTAGTAACATGTTGGATTTTTCAAACAATAATACCAACTCTCCTCCTGATTCTCGCCCTCGACATCCCCCTCCTGATCGCTCCTCCGAGGTTACTACAAAAAACTTCTTCTTTTGATCTGATTATTTGTGGATCAAACCCTATAGTAATTATTGTTTTTAATTAATTCCCTAAATTAGCGGGATTTTGAATCTTGTTTTGCTTTTGGTTGAAATGATTTGAAAAAAATCAAGAATGTTAATTGAATATTTTTTTGTGTGTTGTGTTTGTGTTTGTCAAGTGTAACAGCAATGCAGCAGGTGGTGGGGCAGTGAAGAAGGCCAGAGTTCAATCCTCTTCAAACCAAACCACTTTCAAGGTAAAAATAAAAACAAAAACAAAAGATTGAGAAGCAACCCACATGGAAATAAAAACCAAACAACACAAGAACATCTCTTCTTCTCATCCTATAATTGTCGTTCTTGCTTGTCCATTTCTCCTCTCCTCTGATTCTTAATTCTCTTTGTGGCCTTTTTTTCATCCAAAAATAACCCTAAATATTACAATTTTATTACGTGTTGTATAAATGACTGATTCTTCCTTTTGCTGTCTTTTTGCTCAATAATATATATATATATATATATTTTTTTTTTAAAAAAAAAAAACCCAGGTGAGGAAGGAAAAATTAGGTGACAGAATTACCGCTCTCCACCAGCTAGTTTCCCCATTTGGGAAGGTAAAATCCCCACAGTAATTTCCCTGATTAACCCTCTTAATTTACTATATCATTGTTCTAAAAAAAGCAACTTTTTGGTTCGCTTAACTTTTGTGTACAAAATGAGGTGGTGTTTGTTGAAGTTATGAACCCAGAAAAGTATGAAAAAGAAGCATAATATATAGTTTTGTTTGATTATTTGTGATCCAAGATTAGGCGAATATTCAGGTTAGGGCATAAAAATAATAAAAAAAAAGAATGAAAAAAAAAGGGCACATGGAAATATGAATTTGGATGGTTGTGGCGTGGAGCTGAGGTTGTGTTTTAATTGGTACAGACTGACACAGCTTCAGTTTTGTTAGAAGCTATTGGATACATCAGATTCCTCCACAGTCAAATTGAGGTGATGTTTCTTCTTCTTTTCCTCAAACAACCATGCATTCCCAGATTCCTCTTTTCACTTTTAAATTACTCCAAACAAAAATATATATATACACACACCAAACTAATTTTAACATTTATTCAAAAACATTATTTCTGCATTGGATTCAGGCCCTCAGCTTACCCTACTTGGGCAATACTTCGGCAAGTACGAGGCAGCTCCAACAACATTCTGTAAGCATCCTGAATTGATCCTAAAATTTATAAAATTCCCTTCTCACCCATTTCAAATTTATCCACAAAAATTTCACTTTTTTTTTTTTTTTTTTTTTTTTTAGGTTCAAGGGGAAATAAATAGTGTTTTTCCTGAACACACTGACCAGGTGAGTTTTCTTAATGTAATTTGTTTTTATGTTTTTCTACTGACTTTGTTGACTTAAAGTTGGAATAAAATTTTAAAAAAGATTGTTACGAAAATTTTATGTTTGTTTTTTGACACTCAATGTAAAAGGTTTTCATATATTATTACTATAGATTCTGAGAAAGCTATGTGTTGATTAATAAAGTTTCTTAAAAACAACAATGTTTTCAGCTTTATTGACTTCAAAAACATCAATCCTATAAATTAATTTCACCCAACAAAAGAAAAAGTAGACATTTTTCTTTCAATTTCAACTTTTTGGCTCATGGGTTTTCGTTTTCACAAGCTCTTGAATGAGAATTCAACATCTTTGAAAAAATTATTAATCATATGTTTTGAAACTTGTTTTAGGATGAAGAGGGAAAGAAGGATCTGAGGAGTAGAGGACTGTGTCTGGTTCCAGTCTCCTGCACCCTGCAAGTTGGGAGTGACAATGGAGCAGATTATTGGGCTCCGGCGTTCGGCGGTGGTGGCGGTTTCCGGTAGACGGGGCGGTGGAGGGGATTTGATAGGGCAGTTACAGCAAGCAGCAAGAGTAAAAAAAGAAGAGAATGGAGAGAGCCACATTATGAAACTGATATAACATCATGAGCAGTCAATC

mRNA sequence

TTTTTTTTTAGCCTACTTATAGTTGGGTAGGAGGAAAATTGAGAGTTTTGTTCGGTAAGGCCGTGGTTGGCTCCCCCTCCATTTTTGTTCTGAAGAAGAAAAGAAGATCAAGGTGAGGAAGACATGAATAGAGGGGCGTTGCAGAGCTCAGTTATGCAGCAACAAATGATGGGCTCAGAAAACCCTAGCTGGTGGAATATGGTGAACAGTGGCAGCATTAGAACATCATCCACACAGCAATCTTCTCCCAATAATAATTCTCCTAATTTCCTTTTCCCTCACTCTTCCCTTCCCTTTCCTTCTAATTTCCTCTATGATTTTGCTCAAGACAAGGATCAGCTTCCAGAATCTTGGAGCCACCTTCTATTGGGTGGTTTAGTGGGTGAAGATGATCAAAAGGGTTGTATGGGGGGAATGTTTCAAGGCAAGAAATTGGAAGATTGGGAAGAGGAGATTTTGAATACTAACACTACTACTCACCACCAACAACATGTTGATGTCAAGAAGGAGAACTCAGCTCATGCAACCTCCTGCGCCTATGTTTATGGACATGGTGGTAGCCGTGGCGGTGTCGATGGCAATAATTATCCTTCGTTGCCTCCGAAACAAAACTGGTCGTCTATCATACCGGTCTCGTCTCCTCAGTCATGTGTTACAAGTTTCAGTAGTAACATGTTGGATTTTTCAAACAATAATACCAACTCTCCTCCTGATTCTCGCCCTCGACATCCCCCTCCTGATCGCTCCTCCGAGTGTAACAGCAATGCAGCAGGTGGTGGGGCAGTGAAGAAGGCCAGAGTTCAATCCTCTTCAAACCAAACCACTTTCAAGACTGACACAGCTTCAGTTTTGTTAGAAGCTATTGGATACATCAGATTCCTCCACAGTCAAATTGAGGCCCTCAGCTTACCCTACTTGGGCAATACTTCGGCAAGTACGAGGCAGCTCCAACAACATTCTGTTCAAGGGGAAATAAATAGTGTTTTTCCTGAACACACTGACCAGGATGAAGAGGGAAAGAAGGATCTGAGGAGTAGAGGACTGTGTCTGGTTCCAGTCTCCTGCACCCTGCAAGTTGGGAGTGACAATGGAGCAGATTATTGGGCTCCGGCGTTCGGCGGTGGTGGCGGTTTCCGGTAGACGGGGCGGTGGAGGGGATTTGATAGGGCAGTTACAGCAAGCAGCAAGAGTAAAAAAAGAAGAGAATGGAGAGAGCCACATTATGAAACTGATATAACATCATGAGCAGTCAATC

Coding sequence (CDS)

ATGAATAGAGGGGCGTTGCAGAGCTCAGTTATGCAGCAACAAATGATGGGCTCAGAAAACCCTAGCTGGTGGAATATGGTGAACAGTGGCAGCATTAGAACATCATCCACACAGCAATCTTCTCCCAATAATAATTCTCCTAATTTCCTTTTCCCTCACTCTTCCCTTCCCTTTCCTTCTAATTTCCTCTATGATTTTGCTCAAGACAAGGATCAGCTTCCAGAATCTTGGAGCCACCTTCTATTGGGTGGTTTAGTGGGTGAAGATGATCAAAAGGGTTGTATGGGGGGAATGTTTCAAGGCAAGAAATTGGAAGATTGGGAAGAGGAGATTTTGAATACTAACACTACTACTCACCACCAACAACATGTTGATGTCAAGAAGGAGAACTCAGCTCATGCAACCTCCTGCGCCTATGTTTATGGACATGGTGGTAGCCGTGGCGGTGTCGATGGCAATAATTATCCTTCGTTGCCTCCGAAACAAAACTGGTCGTCTATCATACCGGTCTCGTCTCCTCAGTCATGTGTTACAAGTTTCAGTAGTAACATGTTGGATTTTTCAAACAATAATACCAACTCTCCTCCTGATTCTCGCCCTCGACATCCCCCTCCTGATCGCTCCTCCGAGTGTAACAGCAATGCAGCAGGTGGTGGGGCAGTGAAGAAGGCCAGAGTTCAATCCTCTTCAAACCAAACCACTTTCAAGACTGACACAGCTTCAGTTTTGTTAGAAGCTATTGGATACATCAGATTCCTCCACAGTCAAATTGAGGCCCTCAGCTTACCCTACTTGGGCAATACTTCGGCAAGTACGAGGCAGCTCCAACAACATTCTGTTCAAGGGGAAATAAATAGTGTTTTTCCTGAACACACTGACCAGGATGAAGAGGGAAAGAAGGATCTGAGGAGTAGAGGACTGTGTCTGGTTCCAGTCTCCTGCACCCTGCAAGTTGGGAGTGACAATGGAGCAGATTATTGGGCTCCGGCGTTCGGCGGTGGTGGCGGTTTCCGGTAG

Protein sequence

MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPSNFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHHQQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTSFSSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR

Homology

[Close]

BLAST of Carg12215 vs. NCBI nr
Match: KAG7021868.1 (Transcription factor bHLH68 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 680.6 bits (1755), Expect = 6.8e-192
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60
           MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS
Sbjct: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60

Query: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120
           NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH
Sbjct: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120

Query: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTSF 180
           QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTSF
Sbjct: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTSF 180

Query: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKTDTA 240
           SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKTDTA
Sbjct: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKTDTA 240

Query: 241 SVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGEINSVFPEHTDQDEEGKK 300
           SVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGEINSVFPEHTDQDEEGKK
Sbjct: 241 SVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGEINSVFPEHTDQDEEGKK 300

Query: 301 DLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR 339
           DLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR
Sbjct: 301 DLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR 338

[Close]

BLAST of Carg12215 vs. NCBI nr
Match: XP_022933813.1 (transcription factor bHLH68 [Cucurbita moschata])

HSP 1 Score: 666.0 bits (1717), Expect = 1.7e-187
Identity = 337/360 (93.61%), Postives = 338/360 (93.89%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60
           MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS
Sbjct: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60

Query: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120
           NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH
Sbjct: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120

Query: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTSF 180
           QQHVDVKKENSAHATSCAYVYGHGGSRGGVDG+NYPSLPPKQNWSSIIPVSSPQSCVTSF
Sbjct: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGDNYPSLPPKQNWSSIIPVSSPQSCVTSF 180

Query: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF----- 240
           SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF     
Sbjct: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKVRKE 240

Query: 241 -----------------KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300
                            KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH
Sbjct: 241 KLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300

Query: 301 SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR 339
           SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR
Sbjct: 301 SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR 360

[Close]

BLAST of Carg12215 vs. NCBI nr
Match: KAG6587977.1 (putative E3 ubiquitin-protein ligase LIN-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 666.0 bits (1717), Expect = 1.7e-187
Identity = 337/360 (93.61%), Postives = 338/360 (93.89%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60
           MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS
Sbjct: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60

Query: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120
           NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH
Sbjct: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120

Query: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTSF 180
           QQHVDVKKENSAHATSCAYVYGHGGSRGGVDG+NYPSLPPKQNWSSIIPVSSPQSCVTSF
Sbjct: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGDNYPSLPPKQNWSSIIPVSSPQSCVTSF 180

Query: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF----- 240
           SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF     
Sbjct: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKVRKE 240

Query: 241 -----------------KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300
                            KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH
Sbjct: 241 KLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300

Query: 301 SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR 339
           SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR
Sbjct: 301 SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR 360

[Close]

BLAST of Carg12215 vs. NCBI nr
Match: XP_023531225.1 (transcription factor bHLH68-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 654.8 bits (1688), Expect = 4.0e-184
Identity = 333/361 (92.24%), Postives = 337/361 (93.35%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60
           MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS
Sbjct: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60

Query: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120
           NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGG+FQGKKLEDWEEEILNTNTTTHH
Sbjct: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGVFQGKKLEDWEEEILNTNTTTHH 120

Query: 121 -QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTS 180
            QQHVDVKKENSAHATSCAYVYGHGGS GGVDG+NYPSLPPKQNWSSIIPVSSPQSCVTS
Sbjct: 121 QQQHVDVKKENSAHATSCAYVYGHGGSGGGVDGDNYPSLPPKQNWSSIIPVSSPQSCVTS 180

Query: 181 FSSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF---- 240
           FSSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF    
Sbjct: 181 FSSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKVRK 240

Query: 241 ------------------KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQ 300
                             KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSA+TRQLQQ
Sbjct: 241 EKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSATTRQLQQ 300

Query: 301 HSVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGF 339
           HSVQG+INSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGF
Sbjct: 301 HSVQGDINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGF 360

[Close]

BLAST of Carg12215 vs. NCBI nr
Match: XP_023007568.1 (transcription factor bHLH68 isoform X1 [Cucurbita maxima])

HSP 1 Score: 638.6 bits (1646), Expect = 2.9e-179
Identity = 325/357 (91.04%), Postives = 329/357 (92.16%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60
           MNRGALQSSVMQQQ+MGSENPSWW+MVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLP PS
Sbjct: 1   MNRGALQSSVMQQQIMGSENPSWWHMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPLPS 60

Query: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120
           NFLYDF+QDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH
Sbjct: 61  NFLYDFSQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120

Query: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTSF 180
           QQHVDVKKENS HATSCAYVYGHGGS GGVD +NYPSLPPKQNWSSIIPVSSPQSCVTSF
Sbjct: 121 QQHVDVKKENSVHATSCAYVYGHGGSGGGVDADNYPSLPPKQNWSSIIPVSSPQSCVTSF 180

Query: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF----- 240
           SSNMLDFSNNNTNSPPDSRPRH PPDRSSECNSNAAGGGAVKKARVQSSSNQTTF     
Sbjct: 181 SSNMLDFSNNNTNSPPDSRPRHLPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKVRKE 240

Query: 241 -----------------KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300
                            KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH
Sbjct: 241 KLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300

Query: 301 SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGG 336
           SVQGEINSVFPE TDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGG
Sbjct: 301 SVQGEINSVFPEDTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGG 357

[Close]

BLAST of Carg12215 vs. ExPASy Swiss-Prot
Match: Q8S3D1 (Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 2.1e-50
Identity = 176/434 (40.55%), Postives = 223/434 (51.38%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIR----TSSTQQS------SPNNN--SPN 60
           MNRG L+SS + QQ+M + NP+WWN+  SG +R        QQ+      +PNNN   P 
Sbjct: 1   MNRGVLESSPV-QQLMAAGNPNWWNV--SGGMRPPPPLMGHQQAPLPPHMTPNNNYLRPR 60

Query: 61  FL---FPH-------------SSLPFPSN-FLYDFAQDKDQLPESW--SHLLLGGL-VGE 120
            +   FPH             SS   P+N  L  + +  D  PESW  S LLLGGL +GE
Sbjct: 61  MMPTPFPHFLPSPATSSSSSSSSPSLPNNPNLSSWLESNDLPPESWSLSQLLLGGLMMGE 120

Query: 121 DDQKGCMGGM----------FQGK-KLEDWEEEILNTNTTTHHQQ----HVDVKKENSAH 180
           +++   M             FQGK +LE+WEE++L+      HQQ     VD+K+E    
Sbjct: 121 EERLEMMNHHNHHDEQQHHGFQGKIRLENWEEQVLS------HQQASMVAVDIKQE---- 180

Query: 181 ATSCAYVYGHGGSRGGVDGNN-----YPSLPPKQNWSSIIPVSSPQSCVTSF--SSNMLD 240
                         G ++ NN      P+ PP ++  +    +S  S   +   ++NMLD
Sbjct: 181 --------------GNINNNNGYVISSPNSPPNKSCVTTTTTTSLNSNDDNINNNNNMLD 240

Query: 241 FSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQ-SSSNQTTF---------- 300
           FS+N+ N    S  RH PPDRSSECNS   GG   KK R+Q S S+Q+T           
Sbjct: 241 FSSNH-NGLHLSEGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQSTLKVRKEKLGGR 300

Query: 301 ------------KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGE 336
                       KTDTASVL EAIGYIRFL SQIEALS PY G T++   + QQH +QG+
Sbjct: 301 IAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQH-LQGD 360

[Close]

BLAST of Carg12215 vs. ExPASy Swiss-Prot
Match: Q7XHI5 (Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-37
Identity = 150/409 (36.67%), Postives = 200/409 (48.90%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSG--------SIRTSST-------------QQ 60
           MNRG L+SS + Q +  + NP+WWN V+ G        S    ST               
Sbjct: 1   MNRGVLESSPV-QHLTAAGNPNWWNNVSRGLRPPTPLMSHEPPSTTAFIPSLLPNFFSSP 60

Query: 61  SSPNNNSPNFLFPHSSLPFPSNFLYDFAQDKDQLPESWSHLLLGGL-VGEDDQKGCMG-- 120
           +S +++SP+F  P+S+  F S++L       DQ P S S LLLGGL +GE+++   M   
Sbjct: 61  TSSSSSSPSFPPPNSNPNF-SSWLEMSDLPLDQ-PWSLSQLLLGGLMMGEEEKMEMMNHH 120

Query: 121 ------GMFQGKKLEDWEEEILNTNTTTHHQQHVDVKKENSAHATSCAYVYGHGGSRGGV 180
                   +Q K++++WEE++L         +H    K+ S++  S    YG   S    
Sbjct: 121 HHQNQHQSYQAKRIQNWEEQVL---------RHQASMKQESSNNNS----YGIMSS---- 180

Query: 181 DGNNYPSLPPKQNWSSIIPVSSPQSCVTSFSSNMLDFSNNNTNSPPDSRPRHPPPDRSSE 240
                P+ PP             +SC T  ++N  + +NNN +S  +           SE
Sbjct: 181 -----PNSPPN------------KSCATIINTN--EDNNNNIHSGLN----------LSE 240

Query: 241 CNSNAAGGG--AVKKARVQSSSNQTTF----------------------KTDTASVLLEA 300
           CNS+   G   A KK ++Q  S+Q+T                       KTDTASVL EA
Sbjct: 241 CNSSEMIGSSFANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEA 300

Query: 301 IGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGEINSVFPEHTDQ------------ 333
           IGYIRFLHSQIEALSLPY G T +    + QH+ Q  +N +FPE   Q            
Sbjct: 301 IGYIRFLHSQIEALSLPYFG-TPSRNNMMHQHA-QRNMNGIFPEDPGQLVNEYCMKRGVS 358

[Close]

BLAST of Carg12215 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.9e-16
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 236 KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGEINSVFPEHTDQD 295
           KTDTASVL EAI YI+FLH Q+  LS PY+    AS +Q QQ  + G+  S       QD
Sbjct: 302 KTDTASVLQEAIEYIKFLHDQVTVLSTPYM-KQGASNQQQQQ--ISGKSKS-------QD 361

Query: 296 EEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGG 334
           E    +LR  GLCLVP+S T  V ++  AD+W P FGG
Sbjct: 362 ENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGG 389

[Close]

BLAST of Carg12215 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.4e-16
Identity = 59/162 (36.42%), Postives = 78/162 (48.15%), Query Frame = 0


Query: 197 DSRPRHPPPDRSSECNSNAAGGG----AVKKARVQSSSNQTTF----------------- 256
           D +P++    R S  N    GG     A K+A+ +++S    F                 
Sbjct: 302 DEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKEKMGDRIAALQQLV 361

Query: 257 ----KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGEINSVFPEH 316
               KTD ASVL EAI YI+FLH Q+ ALS PY+ + ++   Q   HS + E++      
Sbjct: 362 SPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDHSTELEVSE----- 421

Query: 317 TDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGG 334
                  + DLRSRGLCLVPVS T  V  D   D+W P FGG
Sbjct: 422 -------EPDLRSRGLCLVPVSSTFPVTHDTTVDFWTPTFGG 451

[Close]

BLAST of Carg12215 vs. ExPASy Swiss-Prot
Match: Q9SFZ3 (Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 3.7e-15
Identity = 64/168 (38.10%), Postives = 83/168 (49.40%), Query Frame = 0


Query: 198 SRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF---------------------- 257
           + P+     R +   +  AG  A KK RV+S S+   F                      
Sbjct: 294 NEPQTSEGKRHNFLMATKAGENASKKPRVESRSSCPPFKVRKEKLGDRIAALQQLVSPFG 353

Query: 258 KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGEINSVFPEHTDQD 317
           KTDTASVL+EAIGYI+FL SQIE LS+PY+    AS  +       G+ + +  +  + D
Sbjct: 354 KTDTASVLMEAIGYIKFLQSQIETLSVPYM---RASRNR------PGKASQLVSQSQEGD 413

Query: 318 EEGKKDLRSRGLCLVPVSCTLQVGSDN-------GADYW--APAFGGG 335
           EE  +DLRSRGLCLVP+SC   V  D        G  +W   P FGGG
Sbjct: 414 EEETRDLRSRGLCLVPLSCMTYVTGDGGDGGGGVGTGFWPTPPGFGGG 452

[Close]

BLAST of Carg12215 vs. ExPASy TrEMBL
Match: A0A6J1F5W4 (transcription factor bHLH68 OS=Cucurbita moschata OX=3662 GN=LOC111441115 PE=4 SV=1)

HSP 1 Score: 666.0 bits (1717), Expect = 8.3e-188
Identity = 337/360 (93.61%), Postives = 338/360 (93.89%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60
           MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS
Sbjct: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60

Query: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120
           NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH
Sbjct: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120

Query: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTSF 180
           QQHVDVKKENSAHATSCAYVYGHGGSRGGVDG+NYPSLPPKQNWSSIIPVSSPQSCVTSF
Sbjct: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGDNYPSLPPKQNWSSIIPVSSPQSCVTSF 180

Query: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF----- 240
           SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF     
Sbjct: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKVRKE 240

Query: 241 -----------------KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300
                            KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH
Sbjct: 241 KLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300

Query: 301 SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR 339
           SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR
Sbjct: 301 SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGGGFR 360

[Close]

BLAST of Carg12215 vs. ExPASy TrEMBL
Match: A0A6J1L807 (transcription factor bHLH68 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111500020 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.4e-179
Identity = 325/357 (91.04%), Postives = 329/357 (92.16%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60
           MNRGALQSSVMQQQ+MGSENPSWW+MVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLP PS
Sbjct: 1   MNRGALQSSVMQQQIMGSENPSWWHMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPLPS 60

Query: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120
           NFLYDF+QDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH
Sbjct: 61  NFLYDFSQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120

Query: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTSF 180
           QQHVDVKKENS HATSCAYVYGHGGS GGVD +NYPSLPPKQNWSSIIPVSSPQSCVTSF
Sbjct: 121 QQHVDVKKENSVHATSCAYVYGHGGSGGGVDADNYPSLPPKQNWSSIIPVSSPQSCVTSF 180

Query: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF----- 240
           SSNMLDFSNNNTNSPPDSRPRH PPDRSSECNSNAAGGGAVKKARVQSSSNQTTF     
Sbjct: 181 SSNMLDFSNNNTNSPPDSRPRHLPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKVRKE 240

Query: 241 -----------------KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300
                            KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH
Sbjct: 241 KLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300

Query: 301 SVQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGG 336
           SVQGEINSVFPE TDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGG
Sbjct: 301 SVQGEINSVFPEDTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGG 357

[Close]

BLAST of Carg12215 vs. ExPASy TrEMBL
Match: A0A6J1L5B1 (transcription factor bHLH68 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111500020 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.3e-153
Identity = 284/316 (89.87%), Postives = 288/316 (91.14%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPFPS 60
           MNRGALQSSVMQQQ+MGSENPSWW+MVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLP PS
Sbjct: 1   MNRGALQSSVMQQQIMGSENPSWWHMVNSGSIRTSSTQQSSPNNNSPNFLFPHSSLPLPS 60

Query: 61  NFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120
           NFLYDF+QDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH
Sbjct: 61  NFLYDFSQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILNTNTTTHH 120

Query: 121 QQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPVSSPQSCVTSF 180
           QQHVDVKKENS HATSCAYVYGHGGS GGVD +NYPSLPPKQNWSSIIPVSSPQSCVTSF
Sbjct: 121 QQHVDVKKENSVHATSCAYVYGHGGSGGGVDADNYPSLPPKQNWSSIIPVSSPQSCVTSF 180

Query: 181 SSNMLDFSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQSSSNQTTF----- 240
           SSNMLDFSNNNTNSPPDSRPRH PPDRSSECNSNAAGGGAVKKARVQSSSNQTTF     
Sbjct: 181 SSNMLDFSNNNTNSPPDSRPRHLPPDRSSECNSNAAGGGAVKKARVQSSSNQTTFKVRKE 240

Query: 241 -----------------KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 295
                            KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH
Sbjct: 241 KLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQH 300

[Close]

BLAST of Carg12215 vs. ExPASy TrEMBL
Match: A0A1S3CHN0 (transcription factor bHLH68 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501031 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.4e-123
Identity = 268/369 (72.63%), Postives = 287/369 (77.78%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVN-SGSIRTSS-TQQSSPN------NNSPNFLFP 60
           MNRG LQSSVM QQMMGSENP+WWNM+N SGS+R+S+ TQ SSPN      ++S N LFP
Sbjct: 1   MNRGVLQSSVM-QQMMGSENPNWWNMMNISGSMRSSTITQHSSPNHTNNSSSSSSNILFP 60

Query: 61  HSSLPFPSNFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEIL 120
           HSSLPFPSN  YD AQD   +PESWS LLLGGLV EDDQKGCM GMFQ KKLEDWEEEIL
Sbjct: 61  HSSLPFPSNCYYD-AQDHQLIPESWSQLLLGGLVVEDDQKGCM-GMFQSKKLEDWEEEIL 120

Query: 121 NT--NTTTHHQQHVDVKKENSAHATSCAYVYGHGGSRGGVDGNNYPSLPPKQNWSSIIPV 180
           N+  N  T HQQ VDVKKE+S HA S  YVYGHGG  G   G++Y  +  KQNWS +I  
Sbjct: 121 NSNNNNNTQHQQQVDVKKEHSPHANS--YVYGHGGGGGVGGGDDYQLVASKQNWSPMIQS 180

Query: 181 SSPQSCVTSFSSNMLDFSNNNTNS---PPDSRPRHPPP--DRSSECNSNAAGGGAVKKAR 240
           SSPQSCVTSFSSNMLDFSNNN N+      SRPR+PPP  DRSSECNSN   GGA KKAR
Sbjct: 181 SSPQSCVTSFSSNMLDFSNNNNNNKSLADHSRPRNPPPVLDRSSECNSN-VNGGAAKKAR 240

Query: 241 VQSSSNQTTFKTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTR--QLQQHSVQ-G 300
           VQSSSNQTTFKTDTASVLLEAIGYIRFL SQIEALSLPYLGNTS STR  Q QQHSVQ G
Sbjct: 241 VQSSSNQTTFKTDTASVLLEAIGYIRFLQSQIEALSLPYLGNTSGSTRQHQHQQHSVQAG 300

Query: 301 EINSVFPEH---------------TDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYW 337
           E N VFPE                ++Q+EEGKKDLRSRGLCLVPVSCTLQVGSDNGADYW
Sbjct: 301 ERNCVFPEDPGQLLNENCLKRKGVSEQEEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYW 360

[Close]

BLAST of Carg12215 vs. ExPASy TrEMBL
Match: A0A0A0M120 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G697530 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 2.3e-121
Identity = 270/395 (68.35%), Postives = 291/395 (73.67%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVN-SGSIRTSS-TQQSSPN-----NNSPNFLFPH 60
           MNRG LQSSVM QQMMGSENP+WWNM+N SGS+R+S+ TQ SSPN     ++S N LFPH
Sbjct: 1   MNRGVLQSSVM-QQMMGSENPNWWNMMNISGSMRSSTITQHSSPNHTNNSSSSSNILFPH 60

Query: 61  SSLPFPSNFLYDFAQDKDQLPESWSHLLLGGLVGEDDQKGCMGGMFQGKKLEDWEEEILN 120
           SSLPFPSN  YD AQD   +PESWS LLLGGLVGEDDQKGCM GMFQ KKLEDWEEEILN
Sbjct: 61  SSLPFPSNCYYD-AQDHHLIPESWSQLLLGGLVGEDDQKGCM-GMFQSKKLEDWEEEILN 120

Query: 121 T-NTTTHHQQHVDVKKENSAHATSCAYVYGHGGS-------RGGVDGNNYPSLPPKQNWS 180
           + N  T HQQ VDVKKE+S HA+S  YVYGHGG         GGV G++Y  +  KQNWS
Sbjct: 121 SNNNNTQHQQQVDVKKEHSPHASS--YVYGHGGGGSGGGGVGGGVGGDDYQLVASKQNWS 180

Query: 181 SIIPVSSPQSCVTSFSSNMLDFSNNNTNS---PPDSRPRHPPP--DRSSECNSNAAGGGA 240
            +I  SSPQSCVTSFSSNMLDFSNNN N+      SRPR+PP   DRSSECNSN   GGA
Sbjct: 181 PMIQSSSPQSCVTSFSSNMLDFSNNNNNNKSLADHSRPRNPPQVLDRSSECNSN-VNGGA 240

Query: 241 VKKARVQSSSNQTTF----------------------KTDTASVLLEAIGYIRFLHSQIE 300
           VKKARVQSSSNQTTF                      KTDTASVLLEAIGYIRFL SQIE
Sbjct: 241 VKKARVQSSSNQTTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIE 300

Query: 301 ALSLPYLGNTSASTR--QLQQHSVQGEINSVFPEH---------------TDQDEEGKKD 337
           ALSLPYLGNTS STR  Q QQHS+QGE N VFPE                ++Q+EEGKKD
Sbjct: 301 ALSLPYLGNTSGSTRQHQHQQHSLQGERNCVFPEDPGQLLNENCLKRKGVSEQEEEGKKD 360

[Close]

BLAST of Carg12215 vs. TAIR 10
Match: AT4G29100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 201.1 bits (510), Expect = 1.5e-51
Identity = 176/434 (40.55%), Postives = 223/434 (51.38%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSGSIR----TSSTQQS------SPNNN--SPN 60
           MNRG L+SS + QQ+M + NP+WWN+  SG +R        QQ+      +PNNN   P 
Sbjct: 1   MNRGVLESSPV-QQLMAAGNPNWWNV--SGGMRPPPPLMGHQQAPLPPHMTPNNNYLRPR 60

Query: 61  FL---FPH-------------SSLPFPSN-FLYDFAQDKDQLPESW--SHLLLGGL-VGE 120
            +   FPH             SS   P+N  L  + +  D  PESW  S LLLGGL +GE
Sbjct: 61  MMPTPFPHFLPSPATSSSSSSSSPSLPNNPNLSSWLESNDLPPESWSLSQLLLGGLMMGE 120

Query: 121 DDQKGCMGGM----------FQGK-KLEDWEEEILNTNTTTHHQQ----HVDVKKENSAH 180
           +++   M             FQGK +LE+WEE++L+      HQQ     VD+K+E    
Sbjct: 121 EERLEMMNHHNHHDEQQHHGFQGKIRLENWEEQVLS------HQQASMVAVDIKQE---- 180

Query: 181 ATSCAYVYGHGGSRGGVDGNN-----YPSLPPKQNWSSIIPVSSPQSCVTSF--SSNMLD 240
                         G ++ NN      P+ PP ++  +    +S  S   +   ++NMLD
Sbjct: 181 --------------GNINNNNGYVISSPNSPPNKSCVTTTTTTSLNSNDDNINNNNNMLD 240

Query: 241 FSNNNTNSPPDSRPRHPPPDRSSECNSNAAGGGAVKKARVQ-SSSNQTTF---------- 300
           FS+N+ N    S  RH PPDRSSECNS   GG   KK R+Q S S+Q+T           
Sbjct: 241 FSSNH-NGLHLSEGRHTPPDRSSECNSLEIGGSTNKKPRLQPSPSSQSTLKVRKEKLGGR 300

Query: 301 ------------KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGE 336
                       KTDTASVL EAIGYIRFL SQIEALS PY G T++   + QQH +QG+
Sbjct: 301 IAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQH-LQGD 360

[Close]

BLAST of Carg12215 vs. TAIR 10
Match: AT2G20100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 158.7 bits (400), Expect = 8.3e-39
Identity = 150/409 (36.67%), Postives = 200/409 (48.90%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSG--------SIRTSST-------------QQ 60
           MNRG L+SS + Q +  + NP+WWN V+ G        S    ST               
Sbjct: 1   MNRGVLESSPV-QHLTAAGNPNWWNNVSRGLRPPTPLMSHEPPSTTAFIPSLLPNFFSSP 60

Query: 61  SSPNNNSPNFLFPHSSLPFPSNFLYDFAQDKDQLPESWSHLLLGGL-VGEDDQKGCMG-- 120
           +S +++SP+F  P+S+  F S++L       DQ P S S LLLGGL +GE+++   M   
Sbjct: 61  TSSSSSSPSFPPPNSNPNF-SSWLEMSDLPLDQ-PWSLSQLLLGGLMMGEEEKMEMMNHH 120

Query: 121 ------GMFQGKKLEDWEEEILNTNTTTHHQQHVDVKKENSAHATSCAYVYGHGGSRGGV 180
                   +Q K++++WEE++L         +H    K+ S++  S    YG   S    
Sbjct: 121 HHQNQHQSYQAKRIQNWEEQVL---------RHQASMKQESSNNNS----YGIMSS---- 180

Query: 181 DGNNYPSLPPKQNWSSIIPVSSPQSCVTSFSSNMLDFSNNNTNSPPDSRPRHPPPDRSSE 240
                P+ PP             +SC T  ++N  + +NNN +S  +           SE
Sbjct: 181 -----PNSPPN------------KSCATIINTN--EDNNNNIHSGLN----------LSE 240

Query: 241 CNSNAAGGG--AVKKARVQSSSNQTTF----------------------KTDTASVLLEA 300
           CNS+   G   A KK ++Q  S+Q+T                       KTDTASVL EA
Sbjct: 241 CNSSEMIGSSFANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEA 300

Query: 301 IGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGEINSVFPEHTDQ------------ 333
           IGYIRFLHSQIEALSLPY G T +    + QH+ Q  +N +FPE   Q            
Sbjct: 301 IGYIRFLHSQIEALSLPYFG-TPSRNNMMHQHA-QRNMNGIFPEDPGQLVNEYCMKRGVS 358

[Close]

BLAST of Carg12215 vs. TAIR 10
Match: AT1G61660.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 7.8e-21
Identity = 57/114 (50.00%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 220 AVKKARVQSSSNQTTFKTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHS 279
           A KK RV + S   TFKTDTASVL EAI YI+FLH Q+  LS PY+    AS +Q QQ  
Sbjct: 264 AAKKPRVTTPSPLPTFKTDTASVLQEAIEYIKFLHDQVTVLSTPYM-KQGASNQQQQQ-- 323

Query: 280 VQGEINSVFPEHTDQDEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGG 334
           + G+  S       QDE    +LR  GLCLVP+S T  V ++  AD+W P FGG
Sbjct: 324 ISGKSKS-------QDENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGG 367

[Close]

BLAST of Carg12215 vs. TAIR 10
Match: AT2G20100.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-20
Identity = 116/348 (33.33%), Postives = 164/348 (47.13%), Query Frame = 0


Query: 1   MNRGALQSSVMQQQMMGSENPSWWNMVNSG--------SIRTSST-------------QQ 60
           MNRG L+SS + Q +  + NP+WWN V+ G        S    ST               
Sbjct: 1   MNRGVLESSPV-QHLTAAGNPNWWNNVSRGLRPPTPLMSHEPPSTTAFIPSLLPNFFSSP 60

Query: 61  SSPNNNSPNFLFPHSSLPFPSNFLYDFAQDKDQLPESWSHLLLGGL-VGEDDQKGCMG-- 120
           +S +++SP+F  P+S+  F S++L       DQ P S S LLLGGL +GE+++   M   
Sbjct: 61  TSSSSSSPSFPPPNSNPNF-SSWLEMSDLPLDQ-PWSLSQLLLGGLMMGEEEKMEMMNHH 120

Query: 121 ------GMFQGKKLEDWEEEILNTNTTTHHQQHVDVKKENSAHATSCAYVYGHGGSRGGV 180
                   +Q K++++WEE++L         +H    K+ S++  S    YG   S    
Sbjct: 121 HHQNQHQSYQAKRIQNWEEQVL---------RHQASMKQESSNNNS----YGIMSS---- 180

Query: 181 DGNNYPSLPPKQNWSSIIPVSSPQSCVTSFSSNMLDFSNNNTNSPPDSRPRHPPPDRSSE 240
                P+ PP             +SC T  ++N  + +NNN +S  +           SE
Sbjct: 181 -----PNSPPN------------KSCATIINTN--EDNNNNIHSGLN----------LSE 240

Query: 241 CNSNAAGGG--AVKKARVQSSSNQTTF----------------------KTDTASVLLEA 295
           CNS+   G   A KK ++Q  S+Q+T                       KTDTASVL EA
Sbjct: 241 CNSSEMIGSSFANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEA 297

[Close]

BLAST of Carg12215 vs. TAIR 10
Match: AT1G61660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-17
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 236 KTDTASVLLEAIGYIRFLHSQIEALSLPYLGNTSASTRQLQQHSVQGEINSVFPEHTDQD 295
           KTDTASVL EAI YI+FLH Q+  LS PY+    AS +Q QQ  + G+  S       QD
Sbjct: 302 KTDTASVLQEAIEYIKFLHDQVTVLSTPYM-KQGASNQQQQQ--ISGKSKS-------QD 361

Query: 296 EEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAFGG 334
           E    +LR  GLCLVP+S T  V ++  AD+W P FGG
Sbjct: 362 ENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGG 389

The following BLAST results are available for this feature:

BLAST of Carg12215 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021868.1	6.8e-192	100.00	Transcription factor bHLH68 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022933813.1	1.7e-187	93.61	transcription factor bHLH68 [Cucurbita moschata]	[more]
KAG6587977.1	1.7e-187	93.61	putative E3 ubiquitin-protein ligase LIN-1, partial [Cucurbita argyrosperma subs...	[more]
XP_023531225.1	4.0e-184	92.24	transcription factor bHLH68-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007568.1	2.9e-179	91.04	transcription factor bHLH68 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg12215 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3D1	2.1e-50	40.55	Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2	[more]
Q7XHI5	1.2e-37	36.67	Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=...	[more]
Q94JL3	1.9e-16	50.00	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q8GXT3	7.4e-16	36.42	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]
Q9SFZ3	3.7e-15	38.10	Transcription factor bHLH110 OS=Arabidopsis thaliana OX=3702 GN=BHLH110 PE=2 SV=...	[more]

BLAST of Carg12215 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5W4	8.3e-188	93.61	transcription factor bHLH68 OS=Cucurbita moschata OX=3662 GN=LOC111441115 PE=4 S...	[more]
A0A6J1L807	1.4e-179	91.04	transcription factor bHLH68 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1115000...	[more]
A0A6J1L5B1	1.3e-153	89.87	transcription factor bHLH68 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1115000...	[more]
A0A1S3CHN0	1.4e-123	72.63	transcription factor bHLH68 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501031 P...	[more]
A0A0A0M120	2.3e-121	68.35	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G697530 PE=4 S...	[more]

BLAST of Carg12215 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29100.1	1.5e-51	40.55	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.1	8.3e-39	36.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.4	7.8e-21	50.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.2	1.3e-20	33.33	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.1	1.4e-17	50.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..196
None	No IPR available	PANTHER	PTHR16223:SF136	OS05G0228400 PROTEIN	coord: 21..236
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 236..322 coord: 21..236
None	No IPR available	PANTHER	PTHR16223:SF136	OS05G0228400 PROTEIN	coord: 236..322
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 236..261 e-value: 1.60309E-8 score: 48.3316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12215-RA	Carg12215-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding