Carg12194 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12194
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr11: 2650063 .. 2650617 (-)
RNA-Seq Expression	Carg12194
Synteny	Carg12194

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCTACTACCATCCATTTCCACCACCAAAAAATTCTTCAAAAAAACCTTATGTAACTTCAAATCTTTCTTCTCCAACACCTACCATCGCCTACCCAAGGCGCCGCCGCCGCCCTTCACCGCCGGCCCCGAAATGGCTAAAGACGATGTCCAAAATGGAAGCTTTACGAAGAGTAATGGCAACAATGCAGTTCATTTTTCGAAGACGATCGACAAGACCCAGATGGACAGAGTTGAAAAAAATGAACAGAGCATCAAAATTGGAGCGACCCATCAAAGGAAAACCCAAGAAAACAGGGAATCGAGGTCGAAGAGGAGTAGTAGGTTGTACGAGTACGATGAGAGGAGAGTGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAATTAGACGCGAGAAATGTGGATCATAGTTTGGATATTGAAGAGATCCTTCATTACTACTCTCGCCTCACTTGTCCAACATACCTCGAAATTGTGGACACATTCTTCATGGACATGTTCGCTGAATTCTGTTCTAACTCCTCGTCTTCTCAACAGAACAAAATTTGA

mRNA sequence

ATGTTCCTACTACCATCCATTTCCACCACCAAAAAATTCTTCAAAAAAACCTTATGTAACTTCAAATCTTTCTTCTCCAACACCTACCATCGCCTACCCAAGGCGCCGCCGCCGCCCTTCACCGCCGGCCCCGAAATGGCTAAAGACGATGTCCAAAATGGAAGCTTTACGAAGAGTAATGGCAACAATGCAGTTCATTTTTCGAAGACGATCGACAAGACCCAGATGGACAGAGTTGAAAAAAATGAACAGAGCATCAAAATTGGAGCGACCCATCAAAGGAAAACCCAAGAAAACAGGGAATCGAGGTCGAAGAGGAGTAGTAGGTTGTACGAGTACGATGAGAGGAGAGTGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAATTAGACGCGAGAAATGTGGATCATAGTTTGGATATTGAAGAGATCCTTCATTACTACTCTCGCCTCACTTGTCCAACATACCTCGAAATTGTGGACACATTCTTCATGGACATGTTCGCTGAATTCTGTTCTAACTCCTCGTCTTCTCAACAGAACAAAATTTGA

Coding sequence (CDS)

ATGTTCCTACTACCATCCATTTCCACCACCAAAAAATTCTTCAAAAAAACCTTATGTAACTTCAAATCTTTCTTCTCCAACACCTACCATCGCCTACCCAAGGCGCCGCCGCCGCCCTTCACCGCCGGCCCCGAAATGGCTAAAGACGATGTCCAAAATGGAAGCTTTACGAAGAGTAATGGCAACAATGCAGTTCATTTTTCGAAGACGATCGACAAGACCCAGATGGACAGAGTTGAAAAAAATGAACAGAGCATCAAAATTGGAGCGACCCATCAAAGGAAAACCCAAGAAAACAGGGAATCGAGGTCGAAGAGGAGTAGTAGGTTGTACGAGTACGATGAGAGGAGAGTGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAATTAGACGCGAGAAATGTGGATCATAGTTTGGATATTGAAGAGATCCTTCATTACTACTCTCGCCTCACTTGTCCAACATACCTCGAAATTGTGGACACATTCTTCATGGACATGTTCGCTGAATTCTGTTCTAACTCCTCGTCTTCTCAACAGAACAAAATTTGA

Protein sequence

MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQNKI

Homology

[Close]

BLAST of Carg12194 vs. NCBI nr
Match: KAG6587958.1 (hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021847.1 hypothetical protein SDJN02_15575, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.1 bits (928), Expect = 2.9e-96
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN 60
           MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN
Sbjct: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN 60

Query: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120
           GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL
Sbjct: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120

Query: 121 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180
           VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ
Sbjct: 121 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180

Query: 181 QNKI 185
           QNKI
Sbjct: 181 QNKI 184

[Close]

BLAST of Carg12194 vs. NCBI nr
Match: XP_022933508.1 (uncharacterized protein LOC111440909 [Cucurbita moschata])

HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN 60
           MFLLPSISTTKKFF+KTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKD+VQNGSFTKSN
Sbjct: 1   MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSN 60

Query: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120
           GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL
Sbjct: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120

Query: 121 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180
           VAKKIKELEKLDARNV HSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ
Sbjct: 121 VAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180

Query: 181 QNKI 185
           QNKI
Sbjct: 181 QNKI 184

[Close]

BLAST of Carg12194 vs. NCBI nr
Match: XP_022973644.1 (uncharacterized protein LOC111472233 [Cucurbita maxima])

HSP 1 Score: 344.4 bits (882), Expect = 6.2e-91
Identity = 177/184 (96.20%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN 60
           MFLLPSISTTKKFFKKT+CNFKSFFSNTYHRLPKA  PPFTAGPEMAKD+VQNGSFTKSN
Sbjct: 39  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKA-APPFTAGPEMAKDEVQNGSFTKSN 98

Query: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120
           GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRK+QENRESRSKRS RLYEYDERRVCL
Sbjct: 99  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRESRSKRSRRLYEYDERRVCL 158

Query: 121 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180
           VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ
Sbjct: 159 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 218

Query: 181 QNKI 185
            NKI
Sbjct: 219 HNKI 221

[Close]

BLAST of Carg12194 vs. NCBI nr
Match: XP_022960595.1 (uncharacterized protein LOC111461329 [Cucurbita moschata])

HSP 1 Score: 245.7 bits (626), Expect = 3.0e-61
Identity = 133/184 (72.28%), Postives = 147/184 (79.89%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN 60
           M L  SI+ TKKFF KTLCNFKSFFSNTY RLPKA PPPF+ G EM KD     SF K++
Sbjct: 1   MMLRASIANTKKFFNKTLCNFKSFFSNTYQRLPKA-PPPFSIGHEMDKD----SSFMKNS 60

Query: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120
             NAV FSKT+D+TQM +VEKNE SIKIG THQRKTQEN          L EYDERR+CL
Sbjct: 61  NGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQEN----------LKEYDERRMCL 120

Query: 121 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180
           VAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+NSSS Q
Sbjct: 121 VAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQ 169

Query: 181 QNKI 185
            N I
Sbjct: 181 TNPI 169

[Close]

BLAST of Carg12194 vs. NCBI nr
Match: KAG6589911.1 (hypothetical protein SDJN03_15334, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 244.6 bits (623), Expect = 6.7e-61
Identity = 133/184 (72.28%), Postives = 146/184 (79.35%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN 60
           M L  SI+ TKKFF KTLCNFKSFFSNTY RLPKA PPPF+ G EM KD     SF K+ 
Sbjct: 1   MMLRASIANTKKFFNKTLCNFKSFFSNTYQRLPKA-PPPFSIGHEMDKD----SSFMKNR 60

Query: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120
             NAV FSKT+D+TQM +VEKNE SIKIG THQRKTQEN          L EYDERR+CL
Sbjct: 61  TGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQEN----------LKEYDERRMCL 120

Query: 121 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180
           VAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+NSSS Q
Sbjct: 121 VAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQ 169

Query: 181 QNKI 185
            N I
Sbjct: 181 TNPI 169

[Close]

BLAST of Carg12194 vs. ExPASy TrEMBL
Match: A0A6J1F4Y2 (uncharacterized protein LOC111440909 OS=Cucurbita moschata OX=3662 GN=LOC111440909 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.7e-95
Identity = 181/184 (98.37%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN 60
           MFLLPSISTTKKFF+KTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKD+VQNGSFTKSN
Sbjct: 1   MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDEVQNGSFTKSN 60

Query: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120
           GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL
Sbjct: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120

Query: 121 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180
           VAKKIKELEKLDARNV HSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ
Sbjct: 121 VAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180

Query: 181 QNKI 185
           QNKI
Sbjct: 181 QNKI 184

[Close]

BLAST of Carg12194 vs. ExPASy TrEMBL
Match: A0A6J1IF62 (uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.0e-91
Identity = 177/184 (96.20%), Postives = 180/184 (97.83%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN 60
           MFLLPSISTTKKFFKKT+CNFKSFFSNTYHRLPKA  PPFTAGPEMAKD+VQNGSFTKSN
Sbjct: 39  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKA-APPFTAGPEMAKDEVQNGSFTKSN 98

Query: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120
           GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRK+QENRESRSKRS RLYEYDERRVCL
Sbjct: 99  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKSQENRESRSKRSRRLYEYDERRVCL 158

Query: 121 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180
           VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ
Sbjct: 159 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 218

Query: 181 QNKI 185
            NKI
Sbjct: 219 HNKI 221

[Close]

BLAST of Carg12194 vs. ExPASy TrEMBL
Match: A0A6J1H9I9 (uncharacterized protein LOC111461329 OS=Cucurbita moschata OX=3662 GN=LOC111461329 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.5e-61
Identity = 133/184 (72.28%), Postives = 147/184 (79.89%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN 60
           M L  SI+ TKKFF KTLCNFKSFFSNTY RLPKA PPPF+ G EM KD     SF K++
Sbjct: 1   MMLRASIANTKKFFNKTLCNFKSFFSNTYQRLPKA-PPPFSIGHEMDKD----SSFMKNS 60

Query: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120
             NAV FSKT+D+TQM +VEKNE SIKIG THQRKTQEN          L EYDERR+CL
Sbjct: 61  NGNAVRFSKTMDETQMKKVEKNEDSIKIGVTHQRKTQEN----------LKEYDERRMCL 120

Query: 121 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180
           VAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYLEIVD FFMD+FAEFC+NSSS Q
Sbjct: 121 VAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLEIVDKFFMDIFAEFCANSSSQQ 169

Query: 181 QNKI 185
            N I
Sbjct: 181 TNPI 169

[Close]

BLAST of Carg12194 vs. ExPASy TrEMBL
Match: A0A6J1JFL9 (uncharacterized protein LOC111485292 OS=Cucurbita maxima OX=3661 GN=LOC111485292 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55
Identity = 126/184 (68.48%), Postives = 139/184 (75.54%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN 60
           M L  SIS+TKKFF KTLCNFKSFFSNTY RLPK           M KD     SF K++
Sbjct: 1   MMLRASISSTKKFFNKTLCNFKSFFSNTYQRLPK-----------MDKD----SSFMKNS 60

Query: 61  GNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCL 120
             NAVHFSKTI +TQM +VEKNE SIKIGATHQRKTQEN          L  YDERR+CL
Sbjct: 61  NGNAVHFSKTIRETQMKKVEKNEDSIKIGATHQRKTQEN----------LKVYDERRMCL 120

Query: 121 VAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQ 180
           VAKK+KELEKLDAR+VDH+LDIEEILHYYSRL+CPTYL+IVD FFMD+FAEFC+N SS Q
Sbjct: 121 VAKKMKELEKLDARDVDHALDIEEILHYYSRLSCPTYLQIVDKFFMDIFAEFCANPSSQQ 159

Query: 181 QNKI 185
            N I
Sbjct: 181 TNPI 159

[Close]

BLAST of Carg12194 vs. ExPASy TrEMBL
Match: A0A6J1CV44 (uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014544 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 4.7e-52
Identity = 123/191 (64.40%), Postives = 145/191 (75.92%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKD----------D 60
           M L  SIS TKKFFKKT+CNFKSFFS +YHRLPK  PPPF AGP M KD          +
Sbjct: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKT-PPPFAAGPRMEKDSTFQFISSQKE 60

Query: 61  VQNGSFTKSNGNNAVHFSKTIDKTQMD--RVEKNEQSI-KIGATHQRKTQENRESRSKRS 120
           VQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  IGATHQRK QENR+   + S
Sbjct: 61  VQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRD---RES 120

Query: 121 SRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMD 179
           S  Y  DERR+CLVAKKIKELEKLD+RNVDH+LDIEEILHYYSRLTCP YLEIVD FF +
Sbjct: 121 SSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTE 180

[Close]

BLAST of Carg12194 vs. TAIR 10
Match: AT1G15260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 6.2e-12
Identity = 55/180 (30.56%), Postives = 86/180 (47.78%), Query Frame = 0


Query: 6   SISTTKKFFKKTLCNFKS-FFSNTYHRLPKAPP--PPFTAGPEMAKDDVQNGSFTKSNGN 65
           SI    +F KKTL + KS   S+ Y  LP   P   P++      +D     S T++  +
Sbjct: 8   SIQRVGRFLKKTLGSIKSTICSSDYKNLPNDTPLLSPYSCSRRCPED-----SQTQTKES 67

Query: 66  NAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRVCLVA 125
             V    T                    THQ+      + + K+ +  +E  ++R   +A
Sbjct: 68  YTVICCDT---------------AVADTTHQKSLNNQHKKKPKKVAEPFEDAKKRGDALA 127

Query: 126 KKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCSNSSSSQQN 183
           +K+K+L  +D R+VDH+LD+ E L  YS +  P YL+IVD FF DM+ EF    +S++ N
Sbjct: 128 QKMKDLNMVDLRDVDHALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEFSDPRTSAKIN 167

[Close]

BLAST of Carg12194 vs. TAIR 10
Match: AT3G24535.1 (unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-11
Identity = 59/180 (32.78%), Postives = 87/180 (48.33%), Query Frame = 0


Query: 1   MFLLPSISTTKKFFKKTLCNFKSFFSN--TYHRLPKAPPPPFTAGPEMAKDDVQNGSFTK 60
           M L  SIS T+K F+KT+ NFKSFF N  TYH+LPK P                  + T 
Sbjct: 1   MVLRSSISNTRKLFQKTIDNFKSFFFNNGTYHKLPKTP------------------NNTS 60

Query: 61  SNGNNAVHFSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRESRSKRSSRLYEYDERRV 120
           +N NN  H +  I  +    + K  Q          K    +     R   L  + + +V
Sbjct: 61  TNINND-HPNSNIITSSSSSIHKQFQPKPKDYVTTNKASSLQPRIGDRDETL--FSQPKV 120

Query: 121 CLVAKKIKELEKLDARNV----DHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFAEFCS 175
            LV  K+KE+EK+   ++     +  D+ E LH YSRL    YL++V+ FFM+++++F S
Sbjct: 121 NLVRTKLKEMEKMMNDDIISDEYYVSDVIEFLHCYSRLRYTAYLDVVENFFMEVYSDFFS 159

[Close]

BLAST of Carg12194 vs. TAIR 10
Match: AT3G16070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15260.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-08
Identity = 48/165 (29.09%), Postives = 81/165 (49.09%), Query Frame = 0


Query: 10  TKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKDDVQNGSFTKSN---GNNAVH 69
           T  FF +TL + KS       +LP+ P   F+             +F +SN   G+N   
Sbjct: 5   TNSFFHRTLHSLKSIIIRAGKKLPR-PKTHFSC------------TFCRSNSLDGDNI-- 64

Query: 70  FSKTIDKTQMDRVEKNEQSIKIGATHQRKTQENRE-SRSKRSSRLYEYDERRVCLVAKKI 129
           ++  ++  + D     E  +K+    + K QE  +  + K++     Y  R    + KKI
Sbjct: 65  YASFLNIWESDLENSIEGPLKL----EHKVQEQEQYHQVKKTEACSSYSSRDCDTMEKKI 124

Query: 130 KELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDMFA 171
            E+   +  +++ +LD+EE LHYYSR++ P YL IVD FF D+++
Sbjct: 125 NEMYMTETVDIEQALDVEEALHYYSRISSPVYLNIVDKFFTDLYS 150

The following BLAST results are available for this feature:

BLAST of Carg12194 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587958.1	2.9e-96	100.00	hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022933508.1	1.6e-94	98.37	uncharacterized protein LOC111440909 [Cucurbita moschata]	[more]
XP_022973644.1	6.2e-91	96.20	uncharacterized protein LOC111472233 [Cucurbita maxima]	[more]
XP_022960595.1	3.0e-61	72.28	uncharacterized protein LOC111461329 [Cucurbita moschata]	[more]
KAG6589911.1	6.7e-61	72.28	hypothetical protein SDJN03_15334, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg12194 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12194 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4Y2	7.7e-95	98.37	uncharacterized protein LOC111440909 OS=Cucurbita moschata OX=3662 GN=LOC1114409...	[more]
A0A6J1IF62	3.0e-91	96.20	uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233...	[more]
A0A6J1H9I9	1.5e-61	72.28	uncharacterized protein LOC111461329 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1JFL9	1.2e-55	68.48	uncharacterized protein LOC111485292 OS=Cucurbita maxima OX=3661 GN=LOC111485292...	[more]
A0A6J1CV44	4.7e-52	64.40	uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of Carg12194 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15260.1	6.2e-12	30.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G24535.1	1.4e-11	32.78	unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bact...	[more]
AT3G16070.1	1.9e-08	29.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..107
None	No IPR available	PANTHER	PTHR35461:SF3	BNAANNG14610D PROTEIN	coord: 1..179
None	No IPR available	PANTHER	PTHR35461	BNAANNG14610D PROTEIN	coord: 1..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12194-RA	Carg12194-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane