Carg12182 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12182
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	fe-S cluster assembly factor HCF101, chloroplastic
Location	Carg_Chr11: 2595028 .. 2602214 (+)
RNA-Seq Expression	Carg12182
Synteny	Carg12182

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTCATTCACAATTTGTCCAGCCACACTGAGACCACTTTTCGCTTCCATTTGCTCTCAAAATGCTTCTTCATTCTCCATCCTCGCCATGCCTCTCATTCAATATCATCAACGCTCAATCCAAACCAGGTAAGTTTCTATGCGCTGTTTTTGCCAAATTCAGTTCGTTTTGTTGAATAATCTTCTAGTCTCTGAATCTTTTACTCTATTCCTCAGATAATGTTCTTCTCCTCTCGGCTGTTAAGTCTTTGGCTCAGAACCAAAGAATGGAAATGCCGATTTCCGTGGTACGTGGAAGGTCCATTCCGAGTTCAGTCACTAGAAATGCTGCTTCTACTGAAGGTAAGTTCGAGTTGATTGTTTTGTTTTGCTGTTGTGTTAAATCCACTTGTGAAAGTGTAAAATATCCATTGGTTAATGTAGAGAGGTTTTGTTTAGTTTTTATTATCCTTTCCAGATTGTAAACTCCTACTGAATTTGGATATTTCGTTGTGGTATTGGAATCCCGAGACAATGAATTTGATTAGTTGGCAATTTTGTTTTGCTCGCTGAAATTGCATTACAGGTAAGAAGCAGAATATTACTAGAGTTGTATATTAGGCGTGGCACGTGCGAATAGTAATTAAAAAAAAAGTTAGCGTCATTAATTTATCTTCACGATTTTTGGTTTAGCATATTTTAAGTTGTTTATAGTAACTTATTGCAACTTGTAACTGAAAGGTTCTAAATATAGATTTTCATTTAAAAAGTCGTTCCTTATTGCTTCAGAATTAATTTCTAAATATGGCTGTTGAATTAAGGGAAATAAAAGGTTTATCTATTTCGAAAGAAAAAAATATATCATGGAAGATTGGGGATAGAACTGATAAAAGACTGTATACAAATAATTATATGGATTGATTCTTTCAGTTGTCAATATTTAATGGCGAATTTATGCTGAGAGGAGAAAACCAGGCCATCACATAACATTTTAACTTGATTAAAGATGGGTCAAAAAAAGCTTATAATCTAAATTTGTTGAGGAACAAATTAATGTCGTGGTAGCGCGCTTTACATCTGAGATTTGGTTAAAAGTGCTTTCACACTATATGAAGTCCAGCATATCAGCTGTGCACCAACCAATATTCGTGGTTGTATCCTAGAAGGATTTCATATTTGTATGTTAGCAAAGCGAAGTAGTTGTCGCATCAGTCATCAAACAATCAAGTTAGTATAAGGGTAGGTTGTTTTAGCATCAAAGCCTTTCTTTAAAACGAATTTGTTTTTGTTATCATTTTATACCACATTAACAATTCGCTGGAATATTTGTTTCATCAATCATATTATTACAGGATTACATCTTCTGTTTTCTGTAAATTGTAGCCGGTGCTTCTGTTATGTTCACTGATACGGCTGAGGCTGATGTATTAAAAGCCTTGTTACAAATTATCGACCCAGATTTTGGAACAGATATTGTCTCATGTTGTTTCGTGAAAGATCTTCACATCGATGAGACTTTAGGAGAGGTTTATTGAGAACATGGAATTGACAGTTTTTTATGTGATGTCTCCTTGTTTTTAATTAAATTTGATGGCTTGTTGGATTACAGGTTTCTTTTCGGTTAGAGCTCACTACACCAGCTTGTCCAGTCAAGGACATGGTAAATGACCCAATCGCGTTGTTTGAACAAGAACTGACATGTTTGGAAGGGTAGACTTTTTGTTTTTAACCACAAGTTTCTTACAAATGTAACTGGGTTTTTTTCTTCCACCATGGTTCTTTCCATGATTTTTGCCTGTAGATGTGCTGCAGCAATTTCATTTGTTTGATATTTAATTTTGCCCATTTCTATTATGCGTTGCTTGAATGTCATAATTAAAGGTAATAATACACATTGCATGTCAGTTTGAACAGAGGGCTAATGAGGTAGTTGCAGCACTTACTTGGGTTAAAAAATGTGAACGTGACAATGTCAGCACAACCAGCAAAGCCTATATATGCTGGGGAACTTCCACATGGGTTGCAGAGAATCTCAAAGATTGTAGCAGTTTCTAGTTGTAAGGTAGGCTACCCATTTTCATCTCTTTTCAACTCTACTCGATCGATTATCTTTCGAAGTGTAGATCATTAATTTCCAAGATTGGCTTCTTTGCTGGAAAATGTTTGTTGCATATTTTCTTAAAATTTTATGTTATATCTATAGACATTGTGGAACACTGTCATCTATTGTCTTTTCATCCGAGGGGAAAGATGTTGCTACTGATTTGGTGTCGTTTTCTGCATCAGGAAATTCATTATTTTCTCTTCTTCTTTCCTGTTAAAGAATAACTAACCATTTATGCAGGGAGGTGTAGGTAAATCGACTGTAGCAGTAAATCTGGCGTATACTTTGGCTGGTATGGGTGCTAGAGTTGGTATTTTTGATGCTGATGTTTATGGACCAAGTTTGCCCACTATGGTTTCCCCTGAAAACAGACTGCTAGAAATGGTAATATTTCAACATTTCAATCAAAACTTTCTCAGTCAGTGACGGTAACTTATAAATATCTGTTTCTACAGAATCCAGAGACGAGAACCATTCTTCCAACTGAATACTTGTGAGTCAAGTTGGTATCTTTTGGATTTGCAGGACAAGGTCGTGCCATAATGCGAGGTCCAATGGTTTCTGGTGTTATTAGCCAGCTACTGACTACCACTGAATGGTTTGTGCTCTTGGTAAAAAGATTAAAAGTCTGGAATATATTAGTAAGAAATCATATTTGTACTGCATGTCTCAAACTAGCACTTAACCCTTGTACTATAGTAAATTTAGTTCTTTGATATATTTTCATCACATTTCTATTATTTTCCTCAAATAAATGCTACTAAGACTGATGAAGAAAGAAACAAGTCGAGAGCTGTTTCAAGACAAAAAAAAAAAGAAAAAAAAAGACGAAATGTTCTGCATGTTTCCTCTCATTCTCGAACAAGTATATATTTAAAGTTCAAATTAAAGACCCATGATTTTCTAATGTACAAACGTATAAAGTAGTAAGGCCCACACTCCTTTTGGTTTAGTTTAATCGTTAGATGGTTTTGAAGAACCCAACGTGTTATGTTTTAAACTAATCTCGCGGGTTACATTTCATATACCAGTTTACTCTGTTGGAGTTCCTTTGCATAACCAGAAAAAAAGCGTGGGTTTGAATGGACCACATATTTATTTTTTTAAAAACCGATCTAATAAGCACATTTAAATACCGACCTATTTAGCATGTTAGTCGGTTTATTCCTCGTCTACATTACCAAAGGACGAGAGAGACATCTACTAGATTTTCTTTGCTTATGAGCCCTTAGGAGCTTACATATATTGTATTCTCCTGGTAGTTTTCATGAGTATGATCTGAACACAAGAGTTCGAATTTTTTTTATACACCTTATCTTAGAAGAACGAGTGGCTAGCTATTATCAGTGTAAGAACATGTAGCCATTTTAAAATCTAATCAGCTGGAAATAATGTAGGGGTGAGTTGGATTACCTAGTTATCGACATGCCCCCTGGAACTGGTGATATTCAACTTACCCTTTGTCAGGTTTGTTGGTATTTTTCCCCCTTGTACTCGATATAATATTTCAAGCCTTTTTCCAATAAGCATGTTAGAGTTCGTTGAAAATGTGTTTTCCTGTTCTTTGATGTATTAGATTCTTCAGTCTTCACTCTTCTTCTTTGTAATACAAATTCTTCCTTTGTATCTTATTGCTGCTTTATTTTCCATTCTTGTTCTCATTGGAGAATACTTACATTATTGTAGAGAGGCTTTCCAATCAGCAAATTACTGCTTACCTTTTTACATCTCGAAACATAGTTGATTCCATTATTTATTATTGGTGATCTGATTGAAAACATATTCAGGTGGTCCCATTAACTGCTGCTATTATTGTGACTACACCCCAAAAATTAGCATTCATTGATGTTGCAAAAGGAGTTCGCATGTTTTCAAAACTGAAGGTTTGAAATTTCTGATGAAAATTTAATTGAATGTCATTGTGTAAATTTTTCTTATTTTGGAATCCATGAAAGAACAGACAAAAGGTTCTGATGATCAGACAGACTCTTGACTTTAATATACGACTCATACTCTAGGTACCCTGTGTTGCCGTGGTCGAGAACATGTGCCACTTTGATGCTGATGGAAAACGTTATTATCCATTTGGTAGAGGTTCAGGTTCCCAGGCACGTAGGATATCCTGATAATTCTTTTGAAGATAGAAGGTTTTTATTCAATTATAGCTAAGAAGTAGTGTGTCAATTGCAGGTTGTCCAGCAGTTTGGAATTCCTTACTTGTTTGATCTTCCCATTAGACCAACTGTACGTTTGATGATAAATCTCTTGGCGACCTTTCCAAGTGTACTTTGACTTAATTTAGATTTTTATGCAATCACCTCAAAGTTTGTTCTTTATTCTGGATAGCTATCAGCATCAGGAGATAGGGGGATACCTGAAGCGGTGGCTGATCTTCAAGGCAAAGTCTCCCAGCATTTCAGGATCTTGGGGTTTGTGTCGTGCAACAGTGTGCCAAGATCCGGCAACAAGGTATTCTGTTTTCACCTTCTAAAAGTGCTGGTATCGTAATTAGGTTTTCTTTATATATTGCTCATGCCACAAAATGAATGCTGATTTTCAATAAATTTTTCTAAATGCCAGTATCAACAGCTGTTACCTACGACAGAACGATCCAAGCAATCAGGGTGAAGGTACCTGATTCTGATGAAGAATTCCTTCTGCATCCTGCAACCGTGAGACGAAATGACCGCTCTGCCCAGAGTGTGGTATGTTCATACAGCGTTTTGTAATTGGTTTTAGTTTATTCCTTTGATTATTTCCTAAATGCAACCTTTACATTCCTACACTTCGCAATCGTACCTAGATAGTTAGATGCTTTAGTAATGTAGTGCTATAACTGGCACTTGAAACACCTTAGTAAAACTTTTTGGTAAAATGTCATGCGTGTAAAGATAGGTTGCTCTTATTGGTGGCAGAAGCTAGTGGGGCTAGAGACTTTTGTATGGCAGGCCAAAGTTTTATCAGCATGTAAACAAGTTTTCTTCATACATATTTATTCGTTGTTTATATTAAAAAATCTATTCTGACCTTGCTCTACTCATTTCTTGAAGTCTCAGACGCCATTTGAAATTCAACAAAGTCGGGGCTGGCTAGTCAATTTCATGCTCGTCATTTTACATCAGCTAGCTAGTACACAATAGTTTAGGGGGTAGACAATTTTGAACTGTAATCAGGCTATTAACCTAGCGCCTCCACAGCCATGACTGCATGGGTCATCACATGTAGGTGTGAAGAGGATTCTAGTCATTGAGACTTGGTTGATAGTAGCAATAAATAAATGGCATGATTATTAATGGCAGCCAAAAATTTCTACTTGATCATTTAATTCAATTTATCAAAGAAAAGGATATCTTTTCGTGTGGAAAGAGAACATTGATCAGGCTTCTTTCTTGGTTGATTAATGTCATTATTAGGATATTTCTATTAAGTGATTGACATTATGACTGATTATTTCACGGCCTAAGATTTGACGGTTTTGATTTTTTTCCCCCAAAACAGGACGAATGGACAGGTGAGCAAAAACTGCAATACGGTGATATTCCAGAAGACATTCAACCCGAGGAAATCAAGCCCATGGGAAACTATGCTTTGACAATTACCTGGCCCGACGGATTTAACCAGGTGAGCAGAATTGCATTTGGATTGATAATTGGCAAGATCAAGTCCATAGTATTGATGGTTAGGGAGGGGGCCGTTTTCTTTTTCCTCTTTCTTTCTTGGGTAATATATGGAATCATTAAAAGGGAAAAAAAAAAAAAAAAAGTCAGAGCGGAGGATAAGCCATTCTCCCAAAGGCCGAGCTAAACAAAATGGGGCTTTTCTGCGTTGGAAGCTTGTTAACTGATATGCAAATATGAAAGAAAGAAGTCAGCGCAATAACTAACCTTATCTCTATCTTCAAGTGGGAAGAACACACAGAAAAAGATCTCTCGCAATGTAACGTATACCTAACACTGATGCCACAAATAAATGCGAAGGGTACTGACTGGCTTCCGAACCAACTATTTTAAAATCTGGGGACCGGTAGCTAGACTGATTACTGTCTATGTATGACCTGTGCTATTGGAAAATTCTAAATGTGTTTCTTTGAAACTTCCCCTCCCATTGGGCATGGCCGTTGGGGATCATGCAATAACAAAAATATTAAGTAGAAGAACAGTTAAAAAGCAGGTAGGGACAAGAAAACGCATTAAAGATTCTATTGTATTTTTTGTTTACTTTTCTTGTGTCTATGTTTTTGGTTAGAACCTTTCTTCTGTCTATCAAGCAGAAAGAGAGTTTGGTTCAAATTAATAATGAATCAAGTCATTTCAAATTTGTAGGCTGCTAAAAATTACCGTCCTAGTTGAAAGAAATCTATTCTTTGTTTTATAAAGAAGTTCTAATATAAACCTTACTGACCGTGTAGGTTGCTCCCTATGATCAACTGCAAATGATGGAGAGGTTAGTTGATGTTCCTCAGCTAACTCCTGCACAGGTAAATTACAGAATTCCTAAATTTTGTGTTTATGCAAGACTTTTCTGATGATGCCGAAATTGTAATATACTGTTTCTTTTTGGGGCTTCCTTCCCTGCAGGCAGCATAGAGTTCAAACAAATAAATAGATTAGGCTATGAAAAATCAGGATTGTTGAATTAAAAGCATCCCACTTTGAATGGAGTTGGAGATAGAAATCCCTCTTATAGTTATTTGTCATGAAATGGATGCTTAAAAGCAGTGGAAATGGTGAAATATCAATCTTGAGCATGTAAATTAGAGAAAACTTTCTGTTTCTTTTGAATTTGTTCTCTGGTTGCATCTTCTATGGTTCATAAAACTCTTCTTGAAGTGTAGAAAGAATCAAACCACCGATTTCTTTGCCGAGCTTGTTTAGATTTCTTGCAGTTCTGACTGGGATAAATTAAATTATACAAACTAAGCTTTTCATTTGCGAACAGAAAAGTCATCAACGTCCCTGTCCCTTCAAAAACTCTAATGGAGAAGAAGCATGGATGGAGACAAGAATACCTCGTGGGGAATTTGTTTAGATATGACCAATTCAATATAAATATATAAAGTAGGTGAACATGCGCATAGCAAACAATTAAGAACCGGCCTAATAAAT

mRNA sequence

AGTTCATTCACAATTTGTCCAGCCACACTGAGACCACTTTTCGCTTCCATTTGCTCTCAAAATGCTTCTTCATTCTCCATCCTCGCCATGCCTCTCATTCAATATCATCAACGCTCAATCCAAACCAGATAATGTTCTTCTCCTCTCGGCTGTTAAGTCTTTGGCTCAGAACCAAAGAATGGAAATGCCGATTTCCGTGGTACGTGGAAGGTCCATTCCGAGTTCAGTCACTAGAAATGCTGCTTCTACTGAAGCCGGTGCTTCTGTTATGTTCACTGATACGGCTGAGGCTGATGTATTAAAAGCCTTGTTACAAATTATCGACCCAGATTTTGGAACAGATATTGTCTCATGTTGTTTCGTGAAAGATCTTCACATCGATGAGACTTTAGGAGAGGTTTCTTTTCGGTTAGAGCTCACTACACCAGCTTGTCCAGTCAAGGACATGCACTTACTTGGGTTAAAAAATGTGAACGTGACAATGTCAGCACAACCAGCAAAGCCTATATATGCTGGGGAACTTCCACATGGGTTGCAGAGAATCTCAAAGATTGTAGCAGTTTCTAGTTGTAAGGGAGGTGTAGGTAAATCGACTGTAGCAGTAAATCTGGCGTATACTTTGGCTGGTATGGGTGCTAGAGTTGGTATTTTTGATGCTGATGTTTATGGACCAAGTTTGCCCACTATGGTTTCCCCTGAAAACAGACTGCTAGAAATGAGACGAGAACCATTCTTCCAACTGAATACTTGTGAGTCAAGACAAGGTCGTGCCATAATGCGAGGTCCAATGGTTTCTGGTGTTATTAGCCAGCTACTGACTACCACTGAATGGGGTGAGTTGGATTACCTAGTTATCGACATGCCCCCTGGAACTGGTGATATTCAACTTACCCTTTGTCAGGTGGTCCCATTAACTGCTGCTATTATTGTGACTACACCCCAAAAATTAGCATTCATTGATGTTGCAAAAGGAGTTCGCATGTACCCTGTGTTGCCGTGGTCGAGAACATGTGCCACTTTGATGCTGATGGAAAACGTTATTATCCATTTGGTAGAGGTTCAGGTTGTCCAGCAGTTTGGAATTCCTTACTTGTTTGATCTTCCCATTAGACCAACTCTATCAGCATCAGGAGATAGGGGGATACCTGAAGCGGTGGCTGATCTTCAAGGCAAAGTCTCCCAGCATTTCAGGATCTTGGGGTTTGTGTCGTGCAACATATCAACAGCTGTTACCTACGACAGAACGATCCAAGCAATCAGGGTGAAGGTACCTGATTCTGATGAAGAATTCCTTCTGCATCCTGCAACCGTGAGACGAAATGACCGCTCTGCCCAGAGTGTGGACGAATGGACAGGTGAGCAAAAACTGCAATACGGTGATATTCCAGAAGACATTCAACCCGAGGAAATCAAGCCCATGGGAAACTATGCTTTGACAATTACCTGGCCCGACGGATTTAACCAGGTTGCTCCCTATGATCAACTGCAAATGATGGAGAGGTTAGTTGATGTTCCTCAGCTAACTCCTGCACAGGCAGCATAGAGTTCAAACAAATAAATAGATTAGGCTATGAAAAATCAGGATTGTTGAATTAAAAGCATCCCACTTTGAATGGAGTTGGAGATAGAAATCCCTCTTATAGTTATTTGTCATGAAATGGATGCTTAAAAGCAGTGGAAATGGTGAAATATCAATCTTGAGCATGTAAATTAGAGAAAACTTTCTGTTTCTTTTGAATTTGTTCTCTGGTTGCATCTTCTATGGTTCATAAAACTCTTCTTGAAGTGTAGAAAGAATCAAACCACCGATTTCTTTGCCGAGCTTGTTTAGATTTCTTGCAGTTCTGACTGGGATAAATTAAATTATACAAACTAAGCTTTTCATTTGCGAACAGAAAAGTCATCAACGTCCCTGTCCCTTCAAAAACTCTAATGGAGAAGAAGCATGGATGGAGACAAGAATACCTCGTGGGGAATTTGTTTAGATATGACCAATTCAATATAAATATATAAAGTAGGTGAACATGCGCATAGCAAACAATTAAGAACCGGCCTAATAAAT

Coding sequence (CDS)

ATGCTTCTTCATTCTCCATCCTCGCCATGCCTCTCATTCAATATCATCAACGCTCAATCCAAACCAGATAATGTTCTTCTCCTCTCGGCTGTTAAGTCTTTGGCTCAGAACCAAAGAATGGAAATGCCGATTTCCGTGGTACGTGGAAGGTCCATTCCGAGTTCAGTCACTAGAAATGCTGCTTCTACTGAAGCCGGTGCTTCTGTTATGTTCACTGATACGGCTGAGGCTGATGTATTAAAAGCCTTGTTACAAATTATCGACCCAGATTTTGGAACAGATATTGTCTCATGTTGTTTCGTGAAAGATCTTCACATCGATGAGACTTTAGGAGAGGTTTCTTTTCGGTTAGAGCTCACTACACCAGCTTGTCCAGTCAAGGACATGCACTTACTTGGGTTAAAAAATGTGAACGTGACAATGTCAGCACAACCAGCAAAGCCTATATATGCTGGGGAACTTCCACATGGGTTGCAGAGAATCTCAAAGATTGTAGCAGTTTCTAGTTGTAAGGGAGGTGTAGGTAAATCGACTGTAGCAGTAAATCTGGCGTATACTTTGGCTGGTATGGGTGCTAGAGTTGGTATTTTTGATGCTGATGTTTATGGACCAAGTTTGCCCACTATGGTTTCCCCTGAAAACAGACTGCTAGAAATGAGACGAGAACCATTCTTCCAACTGAATACTTGTGAGTCAAGACAAGGTCGTGCCATAATGCGAGGTCCAATGGTTTCTGGTGTTATTAGCCAGCTACTGACTACCACTGAATGGGGTGAGTTGGATTACCTAGTTATCGACATGCCCCCTGGAACTGGTGATATTCAACTTACCCTTTGTCAGGTGGTCCCATTAACTGCTGCTATTATTGTGACTACACCCCAAAAATTAGCATTCATTGATGTTGCAAAAGGAGTTCGCATGTACCCTGTGTTGCCGTGGTCGAGAACATGTGCCACTTTGATGCTGATGGAAAACGTTATTATCCATTTGGTAGAGGTTCAGGTTGTCCAGCAGTTTGGAATTCCTTACTTGTTTGATCTTCCCATTAGACCAACTCTATCAGCATCAGGAGATAGGGGGATACCTGAAGCGGTGGCTGATCTTCAAGGCAAAGTCTCCCAGCATTTCAGGATCTTGGGGTTTGTGTCGTGCAACATATCAACAGCTGTTACCTACGACAGAACGATCCAAGCAATCAGGGTGAAGGTACCTGATTCTGATGAAGAATTCCTTCTGCATCCTGCAACCGTGAGACGAAATGACCGCTCTGCCCAGAGTGTGGACGAATGGACAGGTGAGCAAAAACTGCAATACGGTGATATTCCAGAAGACATTCAACCCGAGGAAATCAAGCCCATGGGAAACTATGCTTTGACAATTACCTGGCCCGACGGATTTAACCAGGTTGCTCCCTATGATCAACTGCAAATGATGGAGAGGTTAGTTGATGTTCCTCAGCTAACTCCTGCACAGGCAGCATAG

Protein sequence

MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNAASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELTTPACPVKDMHLLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNTCESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVEVQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGFVSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGDIPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVPQLTPAQAA

Homology

[Close]

BLAST of Carg12182 vs. NCBI nr
Match: KAG7021835.1 (Fe-S cluster assembly factor, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 973.0 bits (2514), Expect = 9.6e-280
Identity = 493/493 (100.00%), Postives = 493/493 (100.00%), Query Frame = 0


Query: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60
           MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA
Sbjct: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60

Query: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120
           ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT
Sbjct: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120

Query: 121 TPACPVKDMHLLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSCKGGVGKSTVA 180
           TPACPVKDMHLLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSCKGGVGKSTVA
Sbjct: 121 TPACPVKDMHLLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSCKGGVGKSTVA 180

Query: 181 VNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNTCESRQGRAIMR 240
           VNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNTCESRQGRAIMR
Sbjct: 181 VNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNTCESRQGRAIMR 240

Query: 241 GPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAIIVTTPQKLAFID 300
           GPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAIIVTTPQKLAFID
Sbjct: 241 GPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAIIVTTPQKLAFID 300

Query: 301 VAKGVRMYPVLPWSRTCATLMLMENVIIHLVEVQVVQQFGIPYLFDLPIRPTLSASGDRG 360
           VAKGVRMYPVLPWSRTCATLMLMENVIIHLVEVQVVQQFGIPYLFDLPIRPTLSASGDRG
Sbjct: 301 VAKGVRMYPVLPWSRTCATLMLMENVIIHLVEVQVVQQFGIPYLFDLPIRPTLSASGDRG 360

Query: 361 IPEAVADLQGKVSQHFRILGFVSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRN 420
           IPEAVADLQGKVSQHFRILGFVSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRN
Sbjct: 361 IPEAVADLQGKVSQHFRILGFVSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRN 420

Query: 421 DRSAQSVDEWTGEQKLQYGDIPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMER 480
           DRSAQSVDEWTGEQKLQYGDIPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMER
Sbjct: 421 DRSAQSVDEWTGEQKLQYGDIPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMER 480

Query: 481 LVDVPQLTPAQAA 494
           LVDVPQLTPAQAA
Sbjct: 481 LVDVPQLTPAQAA 493

[Close]

BLAST of Carg12182 vs. NCBI nr
Match: TYK00079.1 (fe-S cluster assembly factor HCF101 [Cucumis melo var. makuwa])

HSP 1 Score: 784.3 bits (2024), Expect = 6.3e-223
Identity = 424/553 (76.67%), Postives = 448/553 (81.01%), Query Frame = 0


Query: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60
           MLLH+PSSPCLS NII AQSKPDNVLLLSA KSL  NQR++  +S++RG  IPSS TRNA
Sbjct: 1   MLLHTPSSPCLSLNIIKAQSKPDNVLLLSAFKSLVYNQRIDRSLSLLRGNFIPSSFTRNA 60

Query: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120
           ASTEAGASVM T+TAE DVLKAL QIIDPDFGTDIVSC FVKDL IDE LGEVSFRLELT
Sbjct: 61  ASTEAGASVMSTETAETDVLKALSQIIDPDFGTDIVSCGFVKDLQIDEALGEVSFRLELT 120

Query: 121 TPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSC 180
           TPACPVKDM           L  +KNV VTMSAQPAKPIYAGELP GLQRIS IVAVSSC
Sbjct: 121 TPACPVKDMFEQRANEEVAALPWVKNVKVTMSAQPAKPIYAGELPPGLQRISSIVAVSSC 180

Query: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNT- 240
           KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEM  E    L T 
Sbjct: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPETRTILPTE 240

Query: 241 ---------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300
                      + QGRAIMRGPMVSGVISQLLTT EWGELDYL+IDMPPGTGDIQLTLCQ
Sbjct: 241 YLGVKLVSFGFAGQGRAIMRGPMVSGVISQLLTTAEWGELDYLIIDMPPGTGDIQLTLCQ 300

Query: 301 VVPLTAAIIVTTPQKLAFIDVAKGVRMY-----------------------PVLPWSRTC 360
           VVPLTAA+IVTTPQKLAFIDVAKGVRM+                       PVLPWSRTC
Sbjct: 301 VVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKKVLMIRHNLTSRYRSYSRCPVLPWSRTC 360

Query: 361 ATLMLMENVIIHLVEVQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFR 420
           ATLMLMENVII L EVQVVQQFGIP+LFDLPIRPTLSASGD GIPEAVAD QG+V++ F+
Sbjct: 361 ATLMLMENVIILLAEVQVVQQFGIPHLFDLPIRPTLSASGDSGIPEAVADPQGEVAKTFQ 420

Query: 421 ILGFV-------------------SCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVR 480
            LG                     +C +STAVTYDRTI+AIRVKVPDSDEEFLLHPATVR
Sbjct: 421 DLGVCVVQQCAKIRQQGILFSPSNNCVVSTAVTYDRTIRAIRVKVPDSDEEFLLHPATVR 480

Query: 481 RNDRSAQSVDEWTGEQKLQYGDIPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMM 492
           RNDRSAQSVDEWTGEQKLQY DIPEDIQPEEIKPMGNYA+TITWPDGFNQ+APYDQLQMM
Sbjct: 481 RNDRSAQSVDEWTGEQKLQYADIPEDIQPEEIKPMGNYAVTITWPDGFNQIAPYDQLQMM 540

[Close]

BLAST of Carg12182 vs. NCBI nr
Match: KAG7023566.1 (Fe-S cluster assembly factor, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 781.6 bits (2017), Expect = 4.1e-222
Identity = 424/547 (77.51%), Postives = 450/547 (82.27%), Query Frame = 0


Query: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60
           MLLH+PSSPCLSF II AQSKPDNVLLLSA KSL  NQR++  ISV+RG SIPSSVTRNA
Sbjct: 1   MLLHTPSSPCLSFKIIKAQSKPDNVLLLSAFKSLVHNQRIDRSISVLRGSSIPSSVTRNA 60

Query: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120
           ASTEAGASVM ++TAEADVLKAL QIIDPDFGTDIVSC FVKDL IDE LGEVSFRLELT
Sbjct: 61  ASTEAGASVMSSETAEADVLKALSQIIDPDFGTDIVSCGFVKDLDIDEALGEVSFRLELT 120

Query: 121 TPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSC 180
           TPACPVKDM           L  +K+V VTMSAQPAKPIYAGELP GL+RIS IVAVSSC
Sbjct: 121 TPACPVKDMFEQRANEVVAALPWVKDVKVTMSAQPAKPIYAGELPPGLRRISNIVAVSSC 180

Query: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNT- 240
           KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEM  E    + T 
Sbjct: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPETRTIIPTE 240

Query: 241 ---------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300
                      + QGRAIMRGPMVSGVI+QLLTT+EWGELDYLVIDMPPGTGDIQLTLCQ
Sbjct: 241 YLGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTSEWGELDYLVIDMPPGTGDIQLTLCQ 300

Query: 301 VVPLTAAIIVTTPQKLAFIDVAKGVRMY-----------------------PVLPWSRTC 360
           VVPL+AA+IVTTPQKLAFIDVAKGVRM+                       PVLPW RTC
Sbjct: 301 VVPLSAAVIVTTPQKLAFIDVAKGVRMFSKLKKVFMIRHTLTLRYHSYSRCPVLPWLRTC 360

Query: 361 ATLMLMENVIIHLVEVQ----VVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVS 420
           A LML ENVIIHL EVQ    VVQQFGIP+LFDLPIRPTLSASGD GIPEAVAD QG+V+
Sbjct: 361 AILMLTENVIIHLAEVQVLRHVVQQFGIPHLFDLPIRPTLSASGDSGIPEAVADPQGEVA 420

Query: 421 QHFRILGF--------VSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQ 480
           + F+ LG         +   +STAVTYDRTI+AIRVKVPDSDEEFLLHPATVRRNDRSAQ
Sbjct: 421 KTFQDLGVCVVQQCAKIRQQVSTAVTYDRTIRAIRVKVPDSDEEFLLHPATVRRNDRSAQ 480

Query: 481 SVDEWTGEQKLQYGDIPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVP 493
           SVDEWTGEQKLQY DIPEDIQPEEIKPMGNYA+TITWPDGFNQ+APYDQLQMMERLVDVP
Sbjct: 481 SVDEWTGEQKLQYADIPEDIQPEEIKPMGNYAVTITWPDGFNQIAPYDQLQMMERLVDVP 540

[Close]

BLAST of Carg12182 vs. NCBI nr
Match: XP_022932187.1 (LOW QUALITY PROTEIN: fe-S cluster assembly factor HCF101, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 775.0 bits (2000), Expect = 3.8e-220
Identity = 426/533 (79.92%), Postives = 444/533 (83.30%), Query Frame = 0


Query: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60
           MLLHSPSSPCLSFNIINAQSKPDNVLLLSA KSLA NQRMEMPISVVRGRSIPSSVTRNA
Sbjct: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAFKSLAHNQRMEMPISVVRGRSIPSSVTRNA 60

Query: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120
           ASTEAGASVMFTDTAEADVLKA  QIIDPDFGTDIVSC FVKDLHIDETLGEVSFRLELT
Sbjct: 61  ASTEAGASVMFTDTAEADVLKACXQIIDPDFGTDIVSCGFVKDLHIDETLGEVSFRLELT 120

Query: 121 TPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSC 180
           TPACPVKDM           L  +KN+NVTMSAQPAKPIYAGELPHGLQRIS IVAVSSC
Sbjct: 121 TPACPVKDMFEQRANEVVAALPWVKNLNVTMSAQPAKPIYAGELPHGLQRISNIVAVSSC 180

Query: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNT- 240
           KGGVGKSTVAVN+A TLAGMGAR GIF ADVYGPSLPTMVSPENRLLEM  E    L T 
Sbjct: 181 KGGVGKSTVAVNMADTLAGMGARGGIFYADVYGPSLPTMVSPENRLLEMNPETRTILPTE 240

Query: 241 ---------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300
                      + QGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ
Sbjct: 241 YLGVKLVSFGFAGQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300

Query: 301 VVPLTAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE-------- 360
           VVPLTAA+IVTTPQKLAFIDVAKGVRM+  L        + ++EN+     +        
Sbjct: 301 VVPLTAAVIVTTPQKLAFIDVAKGVRMFSKL----KVPCVAVVENMCHFDADGKRYYPFG 360

Query: 361 ----VQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGF------- 420
                QVVQQFGIP  FDLPIRPTLSASGD GIPEAVAD QG+VSQ F+ LG        
Sbjct: 361 RGSGSQVVQQFGIP-XFDLPIRPTLSASGDSGIPEAVADPQGEVSQTFQYLGVCVVQQCA 420

Query: 421 -VSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGD 480
            +   +STAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGD
Sbjct: 421 KIRQQVSTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGD 480

Query: 481 IPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVPQLTPAQAA 494
           IPEDIQPEEIKPMGNYA+TITWP+GFNQ+APYDQLQMMERLVDVPQLTPAQAA
Sbjct: 481 IPEDIQPEEIKPMGNYAVTITWPNGFNQIAPYDQLQMMERLVDVPQLTPAQAA 528

[Close]

BLAST of Carg12182 vs. NCBI nr
Match: XP_038879497.1 (fe-S cluster assembly factor HCF101, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 745.3 bits (1923), Expect = 3.3e-211
Identity = 406/532 (76.32%), Postives = 434/532 (81.58%), Query Frame = 0


Query: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60
           MLLH+PSSPCLSF II AQSKPDNVLL+SA KSL QNQR++  ISV+RG SIPSS TRNA
Sbjct: 1   MLLHTPSSPCLSFKIIKAQSKPDNVLLVSAFKSLVQNQRIDRSISVLRGNSIPSSFTRNA 60

Query: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120
           ASTEAGASVM T+ AE DVLKAL QIIDPDFGTDIVSC FVKDLHIDE +GEVSFRLELT
Sbjct: 61  ASTEAGASVMSTEMAETDVLKALSQIIDPDFGTDIVSCGFVKDLHIDEAIGEVSFRLELT 120

Query: 121 TPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSC 180
           TPACPVKD+           L  +KNV VTMSAQPAKPIYAGELP GLQRIS IVAVSSC
Sbjct: 121 TPACPVKDLFEQRANEVVAALPWVKNVKVTMSAQPAKPIYAGELPPGLQRISNIVAVSSC 180

Query: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNT- 240
           KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEM  E    L T 
Sbjct: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPETRTILPTE 240

Query: 241 ---------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300
                      + QGRAIMRGPMVSGVI+QLLTT EWGELDYLVIDMPPGTGDIQLTLCQ
Sbjct: 241 YLGVKLVSFGFAGQGRAIMRGPMVSGVITQLLTTAEWGELDYLVIDMPPGTGDIQLTLCQ 300

Query: 301 VVPLTAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE-------- 360
           V PLTAA+IVTTPQKLAFIDVAKGVRM+  L        + ++EN+     +        
Sbjct: 301 VAPLTAAVIVTTPQKLAFIDVAKGVRMFSKL----KVPCVAVVENMCHFDADGKRYYPFG 360

Query: 361 ----VQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGF------- 420
                QVVQQFGIP+LFDLPIRPTLSASGD GIPEAVAD QG+V++ F+ LG        
Sbjct: 361 RGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGIPEAVADPQGEVAKTFQDLGVCVVQQCA 420

Query: 421 -VSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGD 480
            +   +STAVTYDRTI+AIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQY D
Sbjct: 421 KIRQQVSTAVTYDRTIRAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYTD 480

Query: 481 IPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVPQLTPAQA 493
           IPEDIQPEEIKPMGNYA+TITWPDGFNQ+APYDQLQMMERLVDVPQLTPAQA
Sbjct: 481 IPEDIQPEEIKPMGNYAVTITWPDGFNQIAPYDQLQMMERLVDVPQLTPAQA 528

[Close]

BLAST of Carg12182 vs. ExPASy Swiss-Prot
Match: Q0JJS8 (Fe-S cluster assembly factor HCF101, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=HCF101 PE=3 SV=3)

HSP 1 Score: 604.0 bits (1556), Expect = 1.5e-171
Identity = 326/466 (69.96%), Postives = 364/466 (78.11%), Query Frame = 0


Query: 65  AGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELTTPAC 124
           A +SV   + A+ DVL AL QIIDPDFGTDIVSC FVKDL I E L EVSFRLELTTPAC
Sbjct: 66  ASSSVASVEDAKKDVLVALSQIIDPDFGTDIVSCGFVKDLEISEALEEVSFRLELTTPAC 125

Query: 125 PVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSCKGGV 184
           P+KDM           L  +K VNVTMSAQPA+P YAGELP GLQ+IS I+AVSSCKGGV
Sbjct: 126 PIKDMFEEKANEVVAALPWVKKVNVTMSAQPARPAYAGELPEGLQKISNIIAVSSCKGGV 185

Query: 185 GKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNT----- 244
           GKSTVAVNLAYTLAGMGARVGIFDADV+GPSLPTMVSPENRLL M  E    L T     
Sbjct: 186 GKSTVAVNLAYTLAGMGARVGIFDADVFGPSLPTMVSPENRLLVMNPESRSILPTEYLGV 245

Query: 245 -----CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPL 304
                  + QGRAIMRGPMVSGVI+QLLTTT+WGELDYLVIDMPPGTGDI LTLCQV PL
Sbjct: 246 KMVSFGFAGQGRAIMRGPMVSGVINQLLTTTDWGELDYLVIDMPPGTGDIHLTLCQVAPL 305

Query: 305 TAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE------------ 364
           TAA+IVTTPQKLAFIDVAKGVRM+  L        + ++EN+     +            
Sbjct: 306 TAAVIVTTPQKLAFIDVAKGVRMFSKL----KVPCVAVVENMCYFDADGKRFYPFGQGSG 365

Query: 365 VQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGF--------VSC 424
            QVVQQFGIP+LFDLPIRPTLSASGD GIPE VAD QG V++ F+ LG         +  
Sbjct: 366 AQVVQQFGIPHLFDLPIRPTLSASGDTGIPEVVADPQGDVAKTFQNLGVCVVQQCAKIRQ 425

Query: 425 NISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGDIPED 484
            +STAV+YDR+I+AIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQK+QYGDIPED
Sbjct: 426 QVSTAVSYDRSIRAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKVQYGDIPED 485

Query: 485 IQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVPQLTPA 491
           I+PEEI+PMGNYA++ITWPDGF+Q+APYDQL+M+ERLVDVP+ T A
Sbjct: 486 IEPEEIRPMGNYAVSITWPDGFSQIAPYDQLEMLERLVDVPRATTA 527

[Close]

BLAST of Carg12182 vs. ExPASy Swiss-Prot
Match: Q6STH5 (Fe-S cluster assembly factor HCF101, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF101 PE=1 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 2.3e-167
Identity = 338/537 (62.94%), Postives = 391/537 (72.81%), Query Frame = 0


Query: 2   LLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRN-- 61
           LLH  S    SF I   +       LL + K L     +   IS+ R R I   V++N  
Sbjct: 3   LLHPQSLRHPSFEIQTQRRSNSTTRLLLSHKFLHSQASI---ISISRTR-ILKRVSQNLS 62

Query: 62  ---AASTEAGASV--MFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVS 121
              AAS +A +SV      T+E DVLKAL QIIDPDFGTDIVSC FVKDL I+E LGEVS
Sbjct: 63  VAKAASAQASSSVGESVAQTSEKDVLKALSQIIDPDFGTDIVSCGFVKDLGINEALGEVS 122

Query: 122 FRLELTTPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKI 181
           FRLELTTPACPVKDM           L  +K VNVTMSAQPAKPI+AG+LP GL RIS I
Sbjct: 123 FRLELTTPACPVKDMFENKANEVVAALPWVKKVNVTMSAQPAKPIFAGQLPFGLSRISNI 182

Query: 182 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPF 241
           +AVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMV+PE+R+LEM  E  
Sbjct: 183 IAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVNPESRILEMNPEKK 242

Query: 242 FQLNT----------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDI 301
             + T            + QGRAIMRGPMVSGVI+QLLTTTEWGELDYLVIDMPPGTGDI
Sbjct: 243 TIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDI 302

Query: 302 QLTLCQVVPLTAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE-- 361
           QLTLCQV PLTAA+IVTTPQKLAFIDVAKGVRM+  L        + ++EN+     +  
Sbjct: 303 QLTLCQVAPLTAAVIVTTPQKLAFIDVAKGVRMFSKL----KVPCVAVVENMCHFDADGK 362

Query: 362 ----------VQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGF- 421
                      +VV+QFGIP+LFDLPIRPTLSASGD G PE V+D    V++ F+ LG  
Sbjct: 363 RYYPFGKGSGSEVVKQFGIPHLFDLPIRPTLSASGDSGTPEVVSDPLSDVARTFQDLGVC 422

Query: 422 -------VSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQ 481
                  +   +STAVTYD+ ++AIRVKVP+SDEEFLLHPATVRRNDRSAQSVDEWTGEQ
Sbjct: 423 VVQQCAKIRQQVSTAVTYDKYLKAIRVKVPNSDEEFLLHPATVRRNDRSAQSVDEWTGEQ 482

Query: 482 KLQYGDIPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVPQLTPAQ 492
           K+ YGD+ EDI+PE+I+PMGNYA++ITWPDGF+Q+APYDQL+ +ERLVDVP L+P +
Sbjct: 483 KVLYGDVAEDIEPEDIRPMGNYAVSITWPDGFSQIAPYDQLEEIERLVDVPPLSPVE 531

[Close]

BLAST of Carg12182 vs. ExPASy Swiss-Prot
Match: P53383 (Iron-sulfur cluster carrier protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=mrp PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.6e-43
Identity = 115/329 (34.95%), Postives = 173/329 (52.58%), Query Frame = 0


Query: 79  VLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELTTPACPVKDM--------- 138
           VL  L  + DP+    +V    ++D+ I    G VSF L LTTPACP+++          
Sbjct: 7   VLTVLRPVQDPELQKSLVELNMIRDVAI--AGGTVSFTLVLTTPACPLREFIVEDCEKAV 66

Query: 139 -HLLGLKNVNVTMSAQPAKPIYAGELP--HGLQRISKIVAVSSCKGGVGKSTVAVNLAYT 198
             L G++ V V ++A+  +      LP    + ++  I+A+SS KGGVGKSTVAVN+A  
Sbjct: 67  KTLPGVEKVEVKVTAETPQ---QKSLPDRQSVGQVKNIIAISSGKGGVGKSTVAVNVAVA 126

Query: 199 LAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRR-------EPFFQLNTCESRQG---- 258
           LA  GA VG+ DAD+YGP+ PTM+      ++++        EP F         G    
Sbjct: 127 LAQTGAAVGLLDADIYGPNAPTMLGLSGAAVQVQNSPQGEVLEPVFNHGIKMVSMGFLID 186

Query: 259 ---RAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAIIVTT 318
                I RGPM++G+I Q L    WG LDYL++DMPPGTGD QLTL Q VP+  A+IVTT
Sbjct: 187 PDQPVIWRGPMLNGIIRQFLYQVNWGALDYLIVDMPPGTGDAQLTLTQSVPMAGAVIVTT 246

Query: 319 PQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE---------------VQVVQ 367
           PQ ++ +D  +G++M+  +  +     L ++EN+   +                  +  +
Sbjct: 247 PQTVSLLDARRGLKMFQQMGVN----VLGIVENMSYFIPPDLPDRQYDLFGSGGGEKASK 306

[Close]

BLAST of Carg12182 vs. ExPASy Swiss-Prot
Match: P72190 (Iron-sulfur cluster carrier protein OS=Pseudomonas fragi OX=296 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.6e-40
Identity = 107/280 (38.21%), Postives = 148/280 (52.86%), Query Frame = 0


Query: 130 HLLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSCKGGVGKSTVAVNLAYTLAG 189
           +L G+ +  V ++   A      ++P GL  +  IVAV+S KGGVGKST A NLA  LA 
Sbjct: 8   NLDGVSSAKVEINCVIAPHKAQAQIP-GLANVKNIVAVASGKGGVGKSTTAANLALALAR 67

Query: 190 MGARVGIFDADVYGPSLPTMVS-PENRLLEMRREPFF-----------QLNTCESRQGRA 249
            GARVGI DAD+YGPS   M    E    ++R + +F            +          
Sbjct: 68  EGARVGILDADIYGPSQGVMFGIAEGTRPKIRDQKWFVPIEAHGVEVMSMAFLTDDNTPM 127

Query: 250 IMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAIIVTTPQKLA 309
           + RGPMVSG + QL+T T W +LDYLVIDMPPGTGDIQLTL Q VP+  ++IVTTPQ LA
Sbjct: 128 VWRGPMVSGALLQLVTQTAWNDLDYLVIDMPPGTGDIQLTLAQKVPVAGSVIVTTPQDLA 187

Query: 310 FIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE--------------VQVVQQFGIPY 369
            +D  KGV M+  +        L ++EN+ +H+                 ++  Q+G+  
Sbjct: 188 LLDARKGVEMFRKV----NIPVLGVVENMAVHICSNCGHAEHLFGEGGGEKLATQYGVEV 247

Query: 370 LFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGFVS 384
           L  LP+   +    D G P A+AD    ++  ++ L   S
Sbjct: 248 LASLPLAMEIREQADNGKPTAIADPNSPIALIYQELAVTS 282

[Close]

BLAST of Carg12182 vs. ExPASy Swiss-Prot
Match: Q9RVM9 (Iron-sulfur cluster carrier protein OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=mrp PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.2e-40
Identity = 110/330 (33.33%), Postives = 171/330 (51.82%), Query Frame = 0


Query: 79  VLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELTTPACPVKD---------- 138
           +L+AL  + DP+   D+VS   ++   +   + +V  ++ LTTPACP+K           
Sbjct: 5   LLRALSTVNDPELHRDLVSLGMIERAELSGDVAQV--KVNLTTPACPLKGQIELDVRSAL 64

Query: 139 MHLLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSCKGGVGKSTVAVNLAYTLA 198
           + + G+++V +   A     + A   P  L  +  +V V S KGGVGKS+VAVNLA +LA
Sbjct: 65  LQVPGVRDVQIEFGAM----VRAATQP-ALPGVKHVVLVGSGKGGVGKSSVAVNLAASLA 124

Query: 199 GMGARVGIFDADVYGPSLPTMVSP-----------ENRLLEMRREPFFQLNTCESRQGRA 258
             GARVG+ DADVYGPS+  M+             + R +E     F  +          
Sbjct: 125 RDGARVGLLDADVYGPSVAHMLGQGQARVTANEDRKMRPIEAHGVRFISMANLSPAGQAL 184

Query: 259 IMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAIIVTTPQKLA 318
           + RGPM+   I Q L  + WGELDYL++D+PPGTGD+QL+L Q V +T A+IVTTPQ +A
Sbjct: 185 VWRGPMLHSAIQQFLKDSAWGELDYLIVDLPPGTGDVQLSLTQTVQVTGAVIVTTPQDVA 244

Query: 319 FIDVAKGVRMY-----PVLPWSRTCATLMLMENVIIHLV-----EVQVVQQFGIPYLFDL 378
            ID A+ + M+     PVL      +  +  +  + + +       ++ +Q+  P L ++
Sbjct: 245 LIDAARAIDMFRKASVPVLGVVENMSYFVAPDTGLTYDIFGRGGSRKLGEQY--PLLGEI 304

[Close]

BLAST of Carg12182 vs. ExPASy TrEMBL
Match: A0A5D3BPM8 (Fe-S cluster assembly factor HCF101 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00300 PE=3 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 3.1e-223
Identity = 424/553 (76.67%), Postives = 448/553 (81.01%), Query Frame = 0


Query: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60
           MLLH+PSSPCLS NII AQSKPDNVLLLSA KSL  NQR++  +S++RG  IPSS TRNA
Sbjct: 1   MLLHTPSSPCLSLNIIKAQSKPDNVLLLSAFKSLVYNQRIDRSLSLLRGNFIPSSFTRNA 60

Query: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120
           ASTEAGASVM T+TAE DVLKAL QIIDPDFGTDIVSC FVKDL IDE LGEVSFRLELT
Sbjct: 61  ASTEAGASVMSTETAETDVLKALSQIIDPDFGTDIVSCGFVKDLQIDEALGEVSFRLELT 120

Query: 121 TPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSC 180
           TPACPVKDM           L  +KNV VTMSAQPAKPIYAGELP GLQRIS IVAVSSC
Sbjct: 121 TPACPVKDMFEQRANEEVAALPWVKNVKVTMSAQPAKPIYAGELPPGLQRISSIVAVSSC 180

Query: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNT- 240
           KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEM  E    L T 
Sbjct: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPETRTILPTE 240

Query: 241 ---------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300
                      + QGRAIMRGPMVSGVISQLLTT EWGELDYL+IDMPPGTGDIQLTLCQ
Sbjct: 241 YLGVKLVSFGFAGQGRAIMRGPMVSGVISQLLTTAEWGELDYLIIDMPPGTGDIQLTLCQ 300

Query: 301 VVPLTAAIIVTTPQKLAFIDVAKGVRMY-----------------------PVLPWSRTC 360
           VVPLTAA+IVTTPQKLAFIDVAKGVRM+                       PVLPWSRTC
Sbjct: 301 VVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKKVLMIRHNLTSRYRSYSRCPVLPWSRTC 360

Query: 361 ATLMLMENVIIHLVEVQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFR 420
           ATLMLMENVII L EVQVVQQFGIP+LFDLPIRPTLSASGD GIPEAVAD QG+V++ F+
Sbjct: 361 ATLMLMENVIILLAEVQVVQQFGIPHLFDLPIRPTLSASGDSGIPEAVADPQGEVAKTFQ 420

Query: 421 ILGFV-------------------SCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVR 480
            LG                     +C +STAVTYDRTI+AIRVKVPDSDEEFLLHPATVR
Sbjct: 421 DLGVCVVQQCAKIRQQGILFSPSNNCVVSTAVTYDRTIRAIRVKVPDSDEEFLLHPATVR 480

Query: 481 RNDRSAQSVDEWTGEQKLQYGDIPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMM 492
           RNDRSAQSVDEWTGEQKLQY DIPEDIQPEEIKPMGNYA+TITWPDGFNQ+APYDQLQMM
Sbjct: 481 RNDRSAQSVDEWTGEQKLQYADIPEDIQPEEIKPMGNYAVTITWPDGFNQIAPYDQLQMM 540

[Close]

BLAST of Carg12182 vs. ExPASy TrEMBL
Match: A0A6J1EVY3 (LOW QUALITY PROTEIN: fe-S cluster assembly factor HCF101, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111438507 PE=3 SV=1)

HSP 1 Score: 775.0 bits (2000), Expect = 1.9e-220
Identity = 426/533 (79.92%), Postives = 444/533 (83.30%), Query Frame = 0


Query: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60
           MLLHSPSSPCLSFNIINAQSKPDNVLLLSA KSLA NQRMEMPISVVRGRSIPSSVTRNA
Sbjct: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAFKSLAHNQRMEMPISVVRGRSIPSSVTRNA 60

Query: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120
           ASTEAGASVMFTDTAEADVLKA  QIIDPDFGTDIVSC FVKDLHIDETLGEVSFRLELT
Sbjct: 61  ASTEAGASVMFTDTAEADVLKACXQIIDPDFGTDIVSCGFVKDLHIDETLGEVSFRLELT 120

Query: 121 TPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSC 180
           TPACPVKDM           L  +KN+NVTMSAQPAKPIYAGELPHGLQRIS IVAVSSC
Sbjct: 121 TPACPVKDMFEQRANEVVAALPWVKNLNVTMSAQPAKPIYAGELPHGLQRISNIVAVSSC 180

Query: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNT- 240
           KGGVGKSTVAVN+A TLAGMGAR GIF ADVYGPSLPTMVSPENRLLEM  E    L T 
Sbjct: 181 KGGVGKSTVAVNMADTLAGMGARGGIFYADVYGPSLPTMVSPENRLLEMNPETRTILPTE 240

Query: 241 ---------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300
                      + QGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ
Sbjct: 241 YLGVKLVSFGFAGQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300

Query: 301 VVPLTAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE-------- 360
           VVPLTAA+IVTTPQKLAFIDVAKGVRM+  L        + ++EN+     +        
Sbjct: 301 VVPLTAAVIVTTPQKLAFIDVAKGVRMFSKL----KVPCVAVVENMCHFDADGKRYYPFG 360

Query: 361 ----VQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGF------- 420
                QVVQQFGIP  FDLPIRPTLSASGD GIPEAVAD QG+VSQ F+ LG        
Sbjct: 361 RGSGSQVVQQFGIP-XFDLPIRPTLSASGDSGIPEAVADPQGEVSQTFQYLGVCVVQQCA 420

Query: 421 -VSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGD 480
            +   +STAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGD
Sbjct: 421 KIRQQVSTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGD 480

Query: 481 IPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVPQLTPAQAA 494
           IPEDIQPEEIKPMGNYA+TITWP+GFNQ+APYDQLQMMERLVDVPQLTPAQAA
Sbjct: 481 IPEDIQPEEIKPMGNYAVTITWPNGFNQIAPYDQLQMMERLVDVPQLTPAQAA 528

[Close]

BLAST of Carg12182 vs. ExPASy TrEMBL
Match: A0A6J1JEZ9 (fe-S cluster assembly factor HCF101, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111485160 PE=3 SV=1)

HSP 1 Score: 743.0 bits (1917), Expect = 7.8e-211
Identity = 405/532 (76.13%), Postives = 435/532 (81.77%), Query Frame = 0


Query: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60
           MLLH+PSSPCLSF II AQSKPDN LLLSA KSL  NQR++  ISV+RG SIPSSVTRNA
Sbjct: 1   MLLHTPSSPCLSFKIIKAQSKPDNALLLSAFKSLVHNQRIDRSISVLRGSSIPSSVTRNA 60

Query: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120
           AST+AGASVM T+T EADVLKAL QIIDPDFGTDIVSC FVKDL IDE LGEVSFRLELT
Sbjct: 61  ASTQAGASVMSTETVEADVLKALSQIIDPDFGTDIVSCGFVKDLQIDEALGEVSFRLELT 120

Query: 121 TPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSC 180
           TPACPVKDM           L  +K+V VTMSAQPAKPIYAGELP GLQRIS IVAVSSC
Sbjct: 121 TPACPVKDMFEQSANEVVAALPWVKDVKVTMSAQPAKPIYAGELPPGLQRISNIVAVSSC 180

Query: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNT- 240
           KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEM  E    + T 
Sbjct: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPETRAIIPTE 240

Query: 241 ---------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300
                      + QGRAIMRGPMVSGVI+QLLTT+EWGELDYLVIDMPPGTGDIQLTLCQ
Sbjct: 241 YLGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTSEWGELDYLVIDMPPGTGDIQLTLCQ 300

Query: 301 VVPLTAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE-------- 360
           VVPL+AA+IVTTPQKLAFIDVAKGVRM+  L        + ++EN+     +        
Sbjct: 301 VVPLSAAVIVTTPQKLAFIDVAKGVRMFSKL----KVPCVAVVENMCHFDADGKRYYPFG 360

Query: 361 ----VQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGF------- 420
                QVVQQFGIP+LFDLPIRPTLSASGD GIPEAVAD QG+V++ F+ LG        
Sbjct: 361 RGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGIPEAVADPQGEVAKTFQDLGVCVVQQCA 420

Query: 421 -VSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGD 480
            +   +STAVTYDRTI+AIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQY D
Sbjct: 421 KIRQQVSTAVTYDRTIRAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYAD 480

Query: 481 IPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVPQLTPAQA 493
           IPEDIQPEEIKPMGNYA+TITWPDGFNQ+APYDQLQMMERLVDVPQLTPAQA
Sbjct: 481 IPEDIQPEEIKPMGNYAVTITWPDGFNQIAPYDQLQMMERLVDVPQLTPAQA 528

[Close]

BLAST of Carg12182 vs. ExPASy TrEMBL
Match: A0A6J1CTM5 (fe-S cluster assembly factor HCF101, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014469 PE=3 SV=1)

HSP 1 Score: 743.0 bits (1917), Expect = 7.8e-211
Identity = 407/532 (76.50%), Postives = 433/532 (81.39%), Query Frame = 0


Query: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60
           MLLHSPSSPCLSF II AQSKPDNVLLL  +KSL +NQR E  ISV RGRSIPSSVTRNA
Sbjct: 1   MLLHSPSSPCLSFKIIKAQSKPDNVLLLPDLKSLVRNQRTERSISVSRGRSIPSSVTRNA 60

Query: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120
           AS EAGASVM  +TAEADVLKAL QIIDPDFGTDIVSC FVKDLHIDE LGEVSFRLELT
Sbjct: 61  ASVEAGASVMSIETAEADVLKALSQIIDPDFGTDIVSCGFVKDLHIDEALGEVSFRLELT 120

Query: 121 TPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSC 180
           TPACPVKDM           L  +KNV VTMSAQPAKPIY+GELP GLQRIS IVAVSSC
Sbjct: 121 TPACPVKDMFEQRANEVVAALPWVKNVKVTMSAQPAKPIYSGELPPGLQRISNIVAVSSC 180

Query: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNT- 240
           KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEM  E    L T 
Sbjct: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPETRSILPTE 240

Query: 241 ---------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300
                      + QGRAIMRGPMVSGVI+QLLTT EWGELDYLVIDMPPGTGDIQLTLCQ
Sbjct: 241 YLGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTAEWGELDYLVIDMPPGTGDIQLTLCQ 300

Query: 301 VVPLTAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE-------- 360
           VVPLTAA+IVTTPQKLAFIDVAKGVRM+  L        + ++EN+     +        
Sbjct: 301 VVPLTAAVIVTTPQKLAFIDVAKGVRMFSKL----KVPCVAVVENMCHFDADGKRYYPFG 360

Query: 361 ----VQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGF------- 420
                QVVQQFGIP+LFDLPIRPTLSASGD GIPEAVAD QG+V++ F+ LG        
Sbjct: 361 RGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGIPEAVADPQGEVAKTFQDLGVCVVQQCA 420

Query: 421 -VSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGD 480
            +   +STAV+YDRTI+AIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQY D
Sbjct: 421 KIRQQVSTAVSYDRTIRAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYTD 480

Query: 481 IPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVPQLTPAQA 493
           IP+DIQPEEIKPMGNYA+TITWPDGFNQ+APYDQLQMMERLVDVPQL PAQA
Sbjct: 481 IPDDIQPEEIKPMGNYAVTITWPDGFNQIAPYDQLQMMERLVDVPQLAPAQA 528

[Close]

BLAST of Carg12182 vs. ExPASy TrEMBL
Match: A0A6J1HAN8 (fe-S cluster assembly factor HCF101, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461624 PE=3 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 1.7e-210
Identity = 404/532 (75.94%), Postives = 436/532 (81.95%), Query Frame = 0


Query: 1   MLLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRNA 60
           MLLH+PSSPCLSF II AQSKPDNVLLLSA KSL  NQR++  ISV+RG SIPSSV RNA
Sbjct: 1   MLLHTPSSPCLSFKIIKAQSKPDNVLLLSAFKSLVHNQRIDRSISVLRGSSIPSSVARNA 60

Query: 61  ASTEAGASVMFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVSFRLELT 120
           ASTEAGASVM T+TAEADVL+AL QIIDPDFGTDIVSC FVKDL IDE LGEVSFRLELT
Sbjct: 61  ASTEAGASVMSTETAEADVLRALSQIIDPDFGTDIVSCGFVKDLQIDEALGEVSFRLELT 120

Query: 121 TPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKIVAVSSC 180
           TPACPVKDM           +  +K+V VTMSAQPAKPIYAGELP GL+RIS IVAVSSC
Sbjct: 121 TPACPVKDMFEQRANEVVAAIPWVKDVKVTMSAQPAKPIYAGELPPGLRRISNIVAVSSC 180

Query: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPFFQLNT- 240
           KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEM  E    + T 
Sbjct: 181 KGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPETRTIIPTE 240

Query: 241 ---------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQ 300
                      + QGRAIMRGPMVSGVI+QLLTT+EWGELDYLVIDMPPGTGDIQLTLCQ
Sbjct: 241 YLGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTSEWGELDYLVIDMPPGTGDIQLTLCQ 300

Query: 301 VVPLTAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE-------- 360
           VVPL+AA+IVTTPQKLAFIDVAKGVRM+  L        + ++EN+     +        
Sbjct: 301 VVPLSAAVIVTTPQKLAFIDVAKGVRMFSKL----KVPCVAVVENMCHFDADGKRYYPFG 360

Query: 361 ----VQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGF------- 420
                QVVQQFGIP+LFDLPIRPTLSASGD GIPEAVAD QG+V++ F+ LG        
Sbjct: 361 RGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGIPEAVADPQGEVAKTFQDLGVCVVQQCA 420

Query: 421 -VSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYGD 480
            +   +STAVTYDRTI+AIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQY D
Sbjct: 421 KIRQQVSTAVTYDRTIRAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKLQYAD 480

Query: 481 IPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVPQLTPAQA 493
           IPEDIQPEEIKPMGNYA+TITWPDGFNQ+APYDQLQMMERLVDVPQLTPAQA
Sbjct: 481 IPEDIQPEEIKPMGNYAVTITWPDGFNQIAPYDQLQMMERLVDVPQLTPAQA 528

[Close]

BLAST of Carg12182 vs. TAIR 10
Match: AT3G24430.1 (ATP binding )

HSP 1 Score: 590.1 bits (1520), Expect = 1.6e-168
Identity = 338/537 (62.94%), Postives = 391/537 (72.81%), Query Frame = 0


Query: 2   LLHSPSSPCLSFNIINAQSKPDNVLLLSAVKSLAQNQRMEMPISVVRGRSIPSSVTRN-- 61
           LLH  S    SF I   +       LL + K L     +   IS+ R R I   V++N  
Sbjct: 3   LLHPQSLRHPSFEIQTQRRSNSTTRLLLSHKFLHSQASI---ISISRTR-ILKRVSQNLS 62

Query: 62  ---AASTEAGASV--MFTDTAEADVLKALLQIIDPDFGTDIVSCCFVKDLHIDETLGEVS 121
              AAS +A +SV      T+E DVLKAL QIIDPDFGTDIVSC FVKDL I+E LGEVS
Sbjct: 63  VAKAASAQASSSVGESVAQTSEKDVLKALSQIIDPDFGTDIVSCGFVKDLGINEALGEVS 122

Query: 122 FRLELTTPACPVKDMH----------LLGLKNVNVTMSAQPAKPIYAGELPHGLQRISKI 181
           FRLELTTPACPVKDM           L  +K VNVTMSAQPAKPI+AG+LP GL RIS I
Sbjct: 123 FRLELTTPACPVKDMFENKANEVVAALPWVKKVNVTMSAQPAKPIFAGQLPFGLSRISNI 182

Query: 182 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRREPF 241
           +AVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMV+PE+R+LEM  E  
Sbjct: 183 IAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVNPESRILEMNPEKK 242

Query: 242 FQLNT----------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTGDI 301
             + T            + QGRAIMRGPMVSGVI+QLLTTTEWGELDYLVIDMPPGTGDI
Sbjct: 243 TIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDI 302

Query: 302 QLTLCQVVPLTAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMENVIIHLVE-- 361
           QLTLCQV PLTAA+IVTTPQKLAFIDVAKGVRM+  L        + ++EN+     +  
Sbjct: 303 QLTLCQVAPLTAAVIVTTPQKLAFIDVAKGVRMFSKL----KVPCVAVVENMCHFDADGK 362

Query: 362 ----------VQVVQQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKVSQHFRILGF- 421
                      +VV+QFGIP+LFDLPIRPTLSASGD G PE V+D    V++ F+ LG  
Sbjct: 363 RYYPFGKGSGSEVVKQFGIPHLFDLPIRPTLSASGDSGTPEVVSDPLSDVARTFQDLGVC 422

Query: 422 -------VSCNISTAVTYDRTIQAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQ 481
                  +   +STAVTYD+ ++AIRVKVP+SDEEFLLHPATVRRNDRSAQSVDEWTGEQ
Sbjct: 423 VVQQCAKIRQQVSTAVTYDKYLKAIRVKVPNSDEEFLLHPATVRRNDRSAQSVDEWTGEQ 482

Query: 482 KLQYGDIPEDIQPEEIKPMGNYALTITWPDGFNQVAPYDQLQMMERLVDVPQLTPAQ 492
           K+ YGD+ EDI+PE+I+PMGNYA++ITWPDGF+Q+APYDQL+ +ERLVDVP L+P +
Sbjct: 483 KVLYGDVAEDIEPEDIRPMGNYAVSITWPDGFSQIAPYDQLEEIERLVDVPPLSPVE 531

[Close]

BLAST of Carg12182 vs. TAIR 10
Match: AT4G19540.1 (IND1(iron-sulfur protein required for NADH dehydrogenase)-like )

HSP 1 Score: 124.8 bits (312), Expect = 1.9e-28
Identity = 80/247 (32.39%), Postives = 130/247 (52.63%), Query Frame = 0


Query: 158 LQRISKIVAVSSCKGGVGKSTVAVNLAYTLAG-MGARVGIFDADVYGPSLPTMVSPENR- 217
           L  +  I+AV+S KGGVGKS+ AVNLA  LA     ++G+ DADVYGPS+P M++   + 
Sbjct: 39  LHGVKDIIAVASGKGGVGKSSTAVNLAVALANKCELKIGLLDADVYGPSVPIMMNINQKP 98

Query: 218 --LLEMRREPF-------FQLNTCESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVID 277
               +M+  P          +     +    + RGPMV   ++++    +WG+LD LV+D
Sbjct: 99  QVNQDMKMIPVENYGVKCMSMGLLVEKDAPLVWRGPMVMSALAKMTKGVDWGDLDILVVD 158

Query: 278 MPPGTGDIQLTLCQVVPLTAAIIVTTPQKLAFIDVAKGVRMYPVLPWSRTCATLMLMEN- 337
           MPPGTGD Q+++ Q + L+ A+IV+TPQ +A  D  +G+ M+  +        L L+EN 
Sbjct: 159 MPPGTGDAQISISQNLKLSGAVIVSTPQDVALADANRGISMFDKV----RVPILGLVENM 218

Query: 338 ---VIIHLVEVQVV----------QQFGIPYLFDLPIRPTLSASGDRGIPEAVADLQGKV 380
              V  H  E   +           + G+  + ++P+  ++    D G+P  V+     V
Sbjct: 219 SCFVCPHCNEPSFIFGKEGARRTAAKKGLKLIGEIPLEMSIREGSDEGVPVVVSSPGSIV 278

[Close]

BLAST of Carg12182 vs. TAIR 10
Match: AT5G50960.1 (nucleotide binding protein 35 )

HSP 1 Score: 104.8 bits (260), Expect = 2.1e-22
Identity = 61/156 (39.10%), Postives = 87/156 (55.77%), Query Frame = 0


Query: 165 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMRR--- 224
           + V S KGGVGKST +  L++ LAGM  +VG+ D D+ GPS+P M+  E + +       
Sbjct: 62  ILVLSGKGGVGKSTFSAQLSFALAGMDHQVGLMDIDICGPSIPKMLGLEGQEIHQSNLGW 121

Query: 225 EPFFQLNT---------CESRQGRAIMRGPMVSGVISQLLTTTEWGELDYLVIDMPPGTG 284
            P +  +            +     I RGP  +G+I Q L    WGE+DYLV+D PPGT 
Sbjct: 122 SPVYVEDNLGVMSIGFMLPNSDEAVIWRGPRKNGLIKQFLKDVYWGEIDYLVVDAPPGTS 181

Query: 285 DIQLTLCQVV---PLTAAIIVTTPQKLAFIDVAKGV 306
           D  +++ Q +    +  AIIVTTPQ+++ IDV K V
Sbjct: 182 DEHISIVQYLLPTGIDGAIIVTTPQEVSLIDVRKEV 217

[Close]

BLAST of Carg12182 vs. TAIR 10
Match: AT5G24020.1 (septum site-determining protein (MIND) )

HSP 1 Score: 58.2 bits (139), Expect = 2.2e-08
Identity = 65/244 (26.64%), Postives = 105/244 (43.03%), Query Frame = 0


Query: 147 KPIYAGELPHGLQRISKIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSL 206
           KP  AGE P       +IV ++S KGGVGK+T   N+  +LA  G  V   DAD+   +L
Sbjct: 50  KPELAGETP-------RIVVITSGKGGVGKTTTTANVGLSLARYGFSVVAIDADLGLRNL 109

Query: 207 PTMVSPENR------------------LLEMRREPFFQLNTCESRQGRAIM--RGPMVSG 266
             ++  ENR                  L+  +R   F+L      + +  M   G  +  
Sbjct: 110 DLLLGLENRVNYTCVEVINGDCRLDQALVRDKRWSNFELLCISKPRSKLPMGFGGKALEW 169

Query: 267 VISQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAIIVTTPQKLAFIDVAK--- 326
           ++  L T  E G  D+++ID P G     +T   + P   A++VTTP   A  D  +   
Sbjct: 170 LVDALKTRPE-GSPDFIIIDCPAGIDAGFIT--AITPANEAVLVTTPDITALRDADRVTG 229

Query: 327 -----GVRMYPVLPWSRTCATLMLMENVIIHLVEVQVVQQFGIPYLFDLPIRPTLSASGD 363
                G+R   ++       T M+    ++ +++VQ  +  G+  L  +P    +  S +
Sbjct: 230 LLECDGIRDIKMI--VNRVRTDMIKGEDMMSVLDVQ--EMLGLSLLGVIPEDSEVIRSTN 279

The following BLAST results are available for this feature:

BLAST of Carg12182 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021835.1	9.6e-280	100.00	Fe-S cluster assembly factor, chloroplastic [Cucurbita argyrosperma subsp. argyr...	[more]
TYK00079.1	6.3e-223	76.67	fe-S cluster assembly factor HCF101 [Cucumis melo var. makuwa]	[more]
KAG7023566.1	4.1e-222	77.51	Fe-S cluster assembly factor, chloroplastic [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022932187.1	3.8e-220	79.92	LOW QUALITY PROTEIN: fe-S cluster assembly factor HCF101, chloroplastic-like [Cu...	[more]
XP_038879497.1	3.3e-211	76.32	fe-S cluster assembly factor HCF101, chloroplastic isoform X1 [Benincasa hispida...	[more]

BLAST of Carg12182 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0JJS8	1.5e-171	69.96	Fe-S cluster assembly factor HCF101, chloroplastic OS=Oryza sativa subsp. japoni...	[more]
Q6STH5	2.3e-167	62.94	Fe-S cluster assembly factor HCF101, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
P53383	3.6e-43	34.95	Iron-sulfur cluster carrier protein OS=Synechocystis sp. (strain PCC 6803 / Kazu...	[more]
P72190	1.6e-40	38.21	Iron-sulfur cluster carrier protein OS=Pseudomonas fragi OX=296 PE=3 SV=1	[more]
Q9RVM9	8.2e-40	33.33	Iron-sulfur cluster carrier protein OS=Deinococcus radiodurans (strain ATCC 1393...	[more]

BLAST of Carg12182 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPM8	3.1e-223	76.67	Fe-S cluster assembly factor HCF101 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A6J1EVY3	1.9e-220	79.92	LOW QUALITY PROTEIN: fe-S cluster assembly factor HCF101, chloroplastic-like OS=...	[more]
A0A6J1JEZ9	7.8e-211	76.13	fe-S cluster assembly factor HCF101, chloroplastic-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1CTM5	7.8e-211	76.50	fe-S cluster assembly factor HCF101, chloroplastic OS=Momordica charantia OX=367...	[more]
A0A6J1HAN8	1.7e-210	75.94	fe-S cluster assembly factor HCF101, chloroplastic-like OS=Cucurbita moschata OX...	[more]

BLAST of Carg12182 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24430.1	1.6e-168	62.94	ATP binding	[more]
AT4G19540.1	1.9e-28	32.39	IND1(iron-sulfur protein required for NADH dehydrogenase)-like	[more]
AT5G50960.1	2.1e-22	39.10	nucleotide binding protein 35	[more]
AT5G24020.1	2.2e-08	26.64	septum site-determining protein (MIND)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038492	GBBH-like, N-terminal domain superfamily	GENE3D	3.30.2020.30		coord: 384..479 e-value: 4.6E-10 score: 41.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 157..378 e-value: 3.9E-53 score: 182.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 163..377
IPR002744	MIP18 family-like	PFAM	PF01883	FeS_assembly_P	coord: 76..129 e-value: 1.3E-10 score: 41.4
IPR033756	Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35	PFAM	PF10609	ParA	coord: 161..376 e-value: 5.8E-55 score: 186.4
IPR034904	Fe-S cluster assembly domain superfamily	GENE3D	3.30.300.130		coord: 70..149 e-value: 1.9E-12 score: 49.2
IPR034904	Fe-S cluster assembly domain superfamily	SUPERFAMILY	117916	Fe-S cluster assembly (FSCA) domain-like	coord: 74..146
IPR010376	Gamma-butyrobetaine hydroxylase-like, N-terminal	PFAM	PF06155	GBBH-like_N	coord: 408..468 e-value: 4.9E-8 score: 33.5
IPR044304	Iron-sulfur protein NUBPL-like	PANTHER	PTHR42961	IRON-SULFUR PROTEIN NUBPL	coord: 69..474
IPR000808	Mrp, conserved site	PROSITE	PS01215	MRP	coord: 257..273
None	No IPR available	CDD	cd02037	Mrp_NBP35	coord: 163..355 e-value: 1.30448E-69 score: 219.295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12182-RA	Carg12182-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding