Carg12179 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12179
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	HMA domain-containing protein
Location	Carg_Chr11: 2585247 .. 2586243 (+)
RNA-Seq Expression	Carg12179
Synteny	Carg12179

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGCGGTGCCAAAACCCTCTGCTTTTTGCTTCCTTCCTGCTCTGTTATATTCAACTCCAACAATCATTTTATTGAATTATGTATTATAAATTTGGGGGCAGCCCAGGTGAGAGGCATTACATATTTGGGTGCCTTTAAATTCCCGGATTTTGCTCTAAATACCGTAAAGGTTCCACCTTTTTTCCTACTTTAAATACACTTGCGCATTCCACCTGCCACTCTCCCAAATTCCTCACTGAGATAGCCATGGACACACTTGAAGGGTGTCCCTGAAATTTACCAAGATTCTTGTTGTGATCATGGGGAAGCTGCACAAGAAAATTTCGAAGGCGTTGGACTGTTTTAGTCTTAGTCTTGGTCCCTCCTCTTGTAGCTCAGGCTCTTGTTTTTGCATAAACTCCATGGAAGAGCAGGAAGATGAGTTTGATAAACTGCCCCTCATACCCACTCACAAAGACCAGCTGCCCACGTTGAAGGACGTTGTCAATGGAAACCAGACCTTGGCCTTTCAACTCAAGCCCAAGGTAACTAATTTTTACCTTTATTACTGTTATTATCATACAGTTTGAAACAGGATTTGTGTGTTTGGGTTTGCAGATGGTGACTCTAAGGGTATCCATGCACTGTAGAGGCTGTGCAAGAAAGGTGGAGAAACACATTTCAAAAATGGAAGGTAAAACACGATTCTTTACAATAATATAATATTGTTCGCTTCGAGTATAACCTCATTATCGTTGAATGAGCAGGAGTGAGCTCGTACACAATAGACCTGGAGACTAAGATGGTGATCATTATTGGGGACATTCTGCCATTTGAAGTGGTGGAGAGTGTCTCTAAAGTCAAAAACGCACAGCTCTGGCAATCCTCGCTAGCTTGATCATTATTCCATATGAACAACACCATTATTAATTAAATGTGTACATCGTTGGAAGACAGGGGGATCGGAATTTGGCAGAGAATATTTTTTATTCTCACTAATTTTGTGCTTTTTTTCTT

mRNA sequence

TGGGCGGTGCCAAAACCCTCTGCTTTTTGCTTCCTTCCTGCTCTGTTATATTCAACTCCAACAATCATTTTATTGAATTATGTATTATAAATTTGGGGGCAGCCCAGGTGAGAGGCATTACATATTTGGGTGCCTTTAAATTCCCGGATTTTGCTCTAAATACCGTAAAGGTTCCACCTTTTTTCCTACTTTAAATACACTTGCGCATTCCACCTGCCACTCTCCCAAATTCCTCACTGAGATAGCCATGGACACACTTGAAGGGTGTCCCTGAAATTTACCAAGATTCTTGTTGTGATCATGGGGAAGCTGCACAAGAAAATTTCGAAGGCGTTGGACTGTTTTAGTCTTAGTCTTGGTCCCTCCTCTTGTAGCTCAGGCTCTTGTTTTTGCATAAACTCCATGGAAGAGCAGGAAGATGAGTTTGATAAACTGCCCCTCATACCCACTCACAAAGACCAGCTGCCCACGTTGAAGGACGTTGTCAATGGAAACCAGACCTTGGCCTTTCAACTCAAGCCCAAGATGGTGACTCTAAGGGTATCCATGCACTGTAGAGGCTGTGCAAGAAAGGTGGAGAAACACATTTCAAAAATGGAAGGTAAAACACGATTCTTTACAATAATATAATATTGTTCGCTTCGAGTATAACCTCATTATCGTTGAATGAGCAGGAGTGAGCTCGTACACAATAGACCTGGAGACTAAGATGGTGATCATTATTGGGGACATTCTGCCATTTGAAGTGGTGGAGAGTGTCTCTAAAGTCAAAAACGCACAGCTCTGGCAATCCTCGCTAGCTTGATCATTATTCCATATGAACAACACCATTATTAATTAAATGTGTACATCGTTGGAAGACAGGGGGATCGGAATTTGGCAGAGAATATTTTTTATTCTCACTAATTTTGTGCTTTTTTTCTT

Coding sequence (CDS)

ATGGGGAAGCTGCACAAGAAAATTTCGAAGGCGTTGGACTGTTTTAGTCTTAGTCTTGGTCCCTCCTCTTGTAGCTCAGGCTCTTGTTTTTGCATAAACTCCATGGAAGAGCAGGAAGATGAGTTTGATAAACTGCCCCTCATACCCACTCACAAAGACCAGCTGCCCACGTTGAAGGACGTTGTCAATGGAAACCAGACCTTGGCCTTTCAACTCAAGCCCAAGATGGTGACTCTAAGGGTATCCATGCACTGTAGAGGCTGTGCAAGAAAGGTGGAGAAACACATTTCAAAAATGGAAGGTAAAACACGATTCTTTACAATAATATAA

Protein sequence

MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRFFTII

Homology

[Close]

BLAST of Carg12179 vs. NCBI nr
Match: KAG7021832.1 (hypothetical protein SDJN02_15560 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224.6 bits (571), Expect = 4.3e-55
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD 60
           MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD
Sbjct: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD 60

Query: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRFFTII 110
           VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRFFTII
Sbjct: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRFFTII 109

[Close]

BLAST of Carg12179 vs. NCBI nr
Match: KAG6587944.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD 60
           MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD
Sbjct: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD 60

Query: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEG + +
Sbjct: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGVSSY 105

[Close]

BLAST of Carg12179 vs. NCBI nr
Match: XP_023531514.1 (heavy metal-associated isoprenylated plant protein 45-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.0 bits (528), Expect = 4.1e-50
Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD 60
           MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIP+HKDQLPTLKD
Sbjct: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPSHKDQLPTLKD 60

Query: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEG + +
Sbjct: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGVSSY 105

[Close]

BLAST of Carg12179 vs. NCBI nr
Match: XP_022973748.1 (heavy metal-associated isoprenylated plant protein 45-like [Cucurbita maxima])

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD 60
           MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLI THKDQLPTLKD
Sbjct: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIATHKDQLPTLKD 60

Query: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEG + +
Sbjct: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGVSSY 105

[Close]

BLAST of Carg12179 vs. NCBI nr
Match: XP_022933309.1 (heavy metal-associated isoprenylated plant protein 45-like [Cucurbita moschata])

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD 60
           MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLI THKDQLPTLKD
Sbjct: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKD 60

Query: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEG + +
Sbjct: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGVSSY 105

[Close]

BLAST of Carg12179 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.1e-04
Identity = 18/31 (58.06%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 75  KMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           ++V LRVS+HC+GCA KV+KH+SK++G T +
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSY 280

[Close]

BLAST of Carg12179 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.9e-04
Identity = 17/31 (54.84%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 75  KMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           ++V L+VS+HCRGC  KV KH+++M+G T F
Sbjct: 181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSF 211

[Close]

BLAST of Carg12179 vs. ExPASy TrEMBL
Match: A0A6J1IE28 (heavy metal-associated isoprenylated plant protein 45-like OS=Cucurbita maxima OX=3661 GN=LOC111472318 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.8e-50
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD 60
           MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLI THKDQLPTLKD
Sbjct: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIATHKDQLPTLKD 60

Query: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEG + +
Sbjct: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGVSSY 105

[Close]

BLAST of Carg12179 vs. ExPASy TrEMBL
Match: A0A6J1EZE4 (heavy metal-associated isoprenylated plant protein 45-like OS=Cucurbita moschata OX=3662 GN=LOC111440501 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.8e-50
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKDQLPTLKD 60
           MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLI THKDQLPTLKD
Sbjct: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLISTHKDQLPTLKD 60

Query: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEG + +
Sbjct: 61  VVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGVSSY 105

[Close]

BLAST of Carg12179 vs. ExPASy TrEMBL
Match: A0A0A0LZH7 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G384030 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.3e-32
Identity = 81/111 (72.97%), Postives = 90/111 (81.08%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSM--EEQEDE-FDKLPLIPTHK---DQ 60
           MGKL KK+ K  DCFS S   +SCSS SCFCINSM  E++EDE FDK PLI  +    +Q
Sbjct: 1   MGKL-KKMGKVFDCFSYS--SNSCSSNSCFCINSMEIEDEEDEFFDKQPLIANNNRKDNQ 60

Query: 61  LPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           LPTLKDVVNGNQTLAFQLKPKMVTLRVSMHC+GCARKVEKHISKMEG + +
Sbjct: 61  LPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCKGCARKVEKHISKMEGVSSY 108

[Close]

BLAST of Carg12179 vs. ExPASy TrEMBL
Match: A0A1S3CJJ6 (uncharacterized protein LOC103501543 OS=Cucumis melo OX=3656 GN=LOC103501543 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.8e-30
Identity = 80/111 (72.07%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSM--EEQEDE-FDKLPLIPTHK---DQ 60
           MGKL KK+ K  DCFS S   +SCSS SCFCINSM  E++EDE FDK PLI  +    +Q
Sbjct: 1   MGKL-KKMGKVFDCFSYS--SNSCSSNSCFCINSMKIEDEEDEFFDKQPLIADNNKKDNQ 60

Query: 61  LPTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           L TLKDVVNGNQTLAFQLKPKMVTLRVSMHC+GCARKVEKHISKMEG + +
Sbjct: 61  LLTLKDVVNGNQTLAFQLKPKMVTLRVSMHCKGCARKVEKHISKMEGVSSY 108

[Close]

BLAST of Carg12179 vs. ExPASy TrEMBL
Match: A0A6J1CUT7 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111014475 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.3e-30
Identity = 80/110 (72.73%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSME-EQEDEFDKLPL--IPTH--KDQL 60
           MGK  KKI+  LDCFS     SSCS  SCFCINSME +QEDEFDK PL  +PTH  K+Q 
Sbjct: 3   MGKKLKKIASVLDCFS---SASSCS--SCFCINSMEDQQEDEFDKEPLMPLPTHNQKEQS 62

Query: 61  PTLKDVVNGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
             LKD+VNGNQTLAFQLKPKMV LRVSMHCRGCARKVEKHISKMEG + +
Sbjct: 63  LRLKDLVNGNQTLAFQLKPKMVMLRVSMHCRGCARKVEKHISKMEGVSSY 107

[Close]

BLAST of Carg12179 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-21
Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 0


Query: 1   MGKLHKKISKALDCFSLSLGPSSCSSGSCFCINSMEEQEDEFDKLPLIPTHKD---QLPT 60
           MGKL +KI +  DC  L L  + C   SCFC+N++ ++E+EF+K PLI +  +   ++  
Sbjct: 1   MGKL-QKIGRVWDC--LFLPTNQC---SCFCLNTLGDEEEEFEKEPLIDSSTEKSGKVMR 60

Query: 61  LKDVV--NGNQTLAFQLKPKMVTLRVSMHCRGCARKVEKHISKMEGKT 104
           LKDVV  +  QTLAF LKPK+V L+VSMHC GCA+KVEKHISK++G T
Sbjct: 61  LKDVVAADHRQTLAFHLKPKIVELKVSMHCYGCAKKVEKHISKLDGVT 102

[Close]

BLAST of Carg12179 vs. TAIR 10
Match: AT2G28660.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 47.4 bits (111), Expect = 8.7e-06
Identity = 20/31 (64.52%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 75  KMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           ++V LRVS+HC+GC  KV KHISKMEG T +
Sbjct: 183 QVVVLRVSIHCKGCEGKVRKHISKMEGVTSY 213

[Close]

BLAST of Carg12179 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.5e-05
Identity = 18/31 (58.06%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 75  KMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           ++V LRVS+HC+GCA KV+KH+SK++G T +
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSY 280

[Close]

BLAST of Carg12179 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.5e-05
Identity = 18/31 (58.06%), Postives = 27/31 (87.10%), Query Frame = 0


Query: 75  KMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           ++V LRVS+HC+GCA KV+KH+SK++G T +
Sbjct: 250 QVVVLRVSLHCKGCAGKVKKHLSKLKGVTSY 280

[Close]

BLAST of Carg12179 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein )

HSP 1 Score: 44.7 bits (104), Expect = 5.6e-05
Identity = 17/31 (54.84%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 75  KMVTLRVSMHCRGCARKVEKHISKMEGKTRF 106
           ++V L+VS+HCRGC  KV KH+++M+G T F
Sbjct: 181 QVVVLKVSLHCRGCEGKVRKHLARMQGVTSF 211

The following BLAST results are available for this feature:

BLAST of Carg12179 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021832.1	4.3e-55	100.00	hypothetical protein SDJN02_15560 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6587944.1	1.4e-50	96.19	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp...	[more]
XP_023531514.1	4.1e-50	95.24	heavy metal-associated isoprenylated plant protein 45-like [Cucurbita pepo subsp...	[more]
XP_022973748.1	1.2e-49	95.24	heavy metal-associated isoprenylated plant protein 45-like [Cucurbita maxima]	[more]
XP_022933309.1	1.2e-49	95.24	heavy metal-associated isoprenylated plant protein 45-like [Cucurbita moschata]	[more]

BLAST of Carg12179 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDS4	2.1e-04	58.06	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]
Q58FZ0	7.9e-04	54.84	Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAK...	[more]

BLAST of Carg12179 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IE28	5.8e-50	95.24	heavy metal-associated isoprenylated plant protein 45-like OS=Cucurbita maxima O...	[more]
A0A6J1EZE4	5.8e-50	95.24	heavy metal-associated isoprenylated plant protein 45-like OS=Cucurbita moschata...	[more]
A0A0A0LZH7	9.3e-32	72.97	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G384030 PE=4 SV...	[more]
A0A1S3CJJ6	1.8e-30	72.07	uncharacterized protein LOC103501543 OS=Cucumis melo OX=3656 GN=LOC103501543 PE=...	[more]
A0A6J1CUT7	2.3e-30	72.73	protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Carg12179 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24450.1	2.5e-21	52.78	Heavy metal transport/detoxification superfamily protein	[more]
AT2G28660.1	8.7e-06	64.52	Chloroplast-targeted copper chaperone protein	[more]
AT5G02600.2	1.5e-05	58.06	Heavy metal transport/detoxification superfamily protein	[more]
AT5G02600.1	1.5e-05	58.06	Heavy metal transport/detoxification superfamily protein	[more]
AT2G37390.1	5.6e-05	54.84	Chloroplast-targeted copper chaperone protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 73..105 e-value: 1.2E-7 score: 34.1
None	No IPR available	PANTHER	PTHR46119:SF11	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 7..105
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..29 score: 7.0
IPR044526	Protein SODIUM POTASSIUM ROOT DEFECTIVE 1/2/3	PANTHER	PTHR46119	OS08G0405700 PROTEIN	coord: 7..105
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 78..101 e-value: 2.35264E-6 score: 39.8965
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 74..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12179-RA	Carg12179-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding