Homology
BLAST of Carg12168 vs. NCBI nr
Match:
KAG7021821.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1672.5 bits (4330), Expect = 0.0e+00
Identity = 840/840 (100.00%), Postives = 840/840 (100.00%), Query Frame = 0
Query: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR
Sbjct: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
Query: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK
Sbjct: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
Query: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD
Sbjct: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
Query: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD
Sbjct: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE
Sbjct: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
Query: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
Query: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL
Sbjct: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
Query: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA
Sbjct: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS
Sbjct: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE
Sbjct: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
Query: 721 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 780
PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR
Sbjct: 721 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 840
DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS
Sbjct: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 840
BLAST of Carg12168 vs. NCBI nr
Match:
XP_022933760.1 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita moschata] >XP_022933761.1 pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1646.7 bits (4263), Expect = 0.0e+00
Identity = 825/840 (98.21%), Postives = 831/840 (98.93%), Query Frame = 0
Query: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
MA+LPFVTPTYPLATLYSTRKLQNS THAAKLNESAGNFQISYKSYLNRISSLCKEGDLR
Sbjct: 1 MASLPFVTPTYPLATLYSTRKLQNSPTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
Query: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
AAVDLVSN ELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK
Sbjct: 61 AAVDLVSNFELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
Query: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
LVIFYSKCDESEIANRLFRKLRVQN+FSWAAIMGLKCRIGFNEEALLC CEMHENGLFLD
Sbjct: 121 LVIFYSKCDESEIANRLFRKLRVQNEFSWAAIMGLKCRIGFNEEALLCCCEMHENGLFLD 180
Query: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
NFVIPIALKA+GSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD
Sbjct: 181 NFVIPIALKAAGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE
Sbjct: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAE VFSEMLEKDVVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAELVFSEMLEKDVVTWNLLVSGYVH 360
Query: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
ASSIVDTYAKCGKLECARRVFDL IKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDTYAKCGKLECARRVFDLAIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
Query: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL
Sbjct: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
Query: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
TFQ MQEAGIKPNSLSISPLLSACT MASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA
Sbjct: 541 TFQLMQEAGIKPNSLSISPLLSACTAMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS
Sbjct: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
I+SACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRL+LAMPFE
Sbjct: 661 IISACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLVLAMPFE 720
Query: 721 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 780
PDAFIFGSLLAACREHPD+ELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDE SKVR
Sbjct: 721 PDAFIFGSLLAACREHPDIELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 840
DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHV S
Sbjct: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVTS 840
BLAST of Carg12168 vs. NCBI nr
Match:
KAG6587934.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1644.8 bits (4258), Expect = 0.0e+00
Identity = 826/836 (98.80%), Postives = 828/836 (99.04%), Query Frame = 0
Query: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
MAALPFVTPTYPLATLYSTRKLQNS THAAKLNESAGNFQISYKSYLNRISSLCKEGDLR
Sbjct: 47 MAALPFVTPTYPLATLYSTRKLQNSPTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 106
Query: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK
Sbjct: 107 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 166
Query: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
LVIFYSKCDESEIANRLFRKLRVQN+FSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD
Sbjct: 167 LVIFYSKCDESEIANRLFRKLRVQNEFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 226
Query: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD
Sbjct: 227 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 286
Query: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE
Sbjct: 287 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 346
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAE VFSEMLEKDVV WNLLVSGYVH
Sbjct: 347 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAELVFSEMLEKDVVAWNLLVSGYVH 406
Query: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 407 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 466
Query: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL
Sbjct: 467 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 526
Query: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL
Sbjct: 527 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 586
Query: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGR IHGYITRREL LSTPVLCSLVNMYA
Sbjct: 587 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRTIHGYITRRELPLSTPVLCSLVNMYA 646
Query: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEA SLFRRLKEECIKPDEITFTS
Sbjct: 647 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEAFSLFRRLKEECIKPDEITFTS 706
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE
Sbjct: 707 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 766
Query: 721 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 780
PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDE SKVR
Sbjct: 767 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 826
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCI 837
DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTR +
Sbjct: 827 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRLV 882
BLAST of Carg12168 vs. NCBI nr
Match:
XP_023531196.1 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1639.0 bits (4243), Expect = 0.0e+00
Identity = 822/840 (97.86%), Postives = 832/840 (99.05%), Query Frame = 0
Query: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
MAALPFVTPTYPLA+LYSTRKL NS THAAKLNESAGNFQISYKSYLNRISSLCKEGDLR
Sbjct: 1 MAALPFVTPTYPLASLYSTRKLHNSPTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
Query: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
AAVDLVSNLELQGIT+GPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK
Sbjct: 61 AAVDLVSNLELQGITVGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
Query: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
LVIFYSKCDESEIANRLFRKLRVQN+FSWAAIMGLKCRIGFNEEALLCFC+MHENGLFLD
Sbjct: 121 LVIFYSKCDESEIANRLFRKLRVQNEFSWAAIMGLKCRIGFNEEALLCFCDMHENGLFLD 180
Query: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
NFVIPIALKASGSLQWIGFGKAIHGYAVKM LGGCIFVASSLLDMYGKCGVCGDA+KVFD
Sbjct: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMGLGGCIFVASSLLDMYGKCGVCGDARKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
KIPEKNIVAWNSMIVNFTHNGLYEEA+ETFYDMRVEGVEPTQVTLS+FLSASANLSLINE
Sbjct: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAIETFYDMRVEGVEPTQVTLSTFLSASANLSLINE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAE VFSEMLEKDVVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAELVFSEMLEKDVVTWNLLVSGYVH 360
Query: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
ASSIVDTYAKCGKLECARRVF+LTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDTYAKCGKLECARRVFELTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
Query: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGL+QNGLGDEAFL
Sbjct: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLSQNGLGDEAFL 540
Query: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA
Sbjct: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS
Sbjct: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE
Sbjct: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
Query: 721 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 780
PDAFIFGSLLAACREHPDVELKERL ERLLKLEPDNSGNYVALSNAYAATGMWDE SKVR
Sbjct: 721 PDAFIFGSLLAACREHPDVELKERLSERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 840
DLMKERGLRKTPGHSLIQIGN+THVFFAGDKSHSKTKEIYKMLALL IEMQVTRCI VIS
Sbjct: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSKTKEIYKMLALLGIEMQVTRCIPVIS 840
BLAST of Carg12168 vs. NCBI nr
Match:
XP_023004766.1 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1596.3 bits (4132), Expect = 0.0e+00
Identity = 802/822 (97.57%), Postives = 809/822 (98.42%), Query Frame = 0
Query: 19 TRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLRAAVDLVSNLELQGITIGP 78
TRKLQNS THAAKLNESA NFQISYKSYL RISSLCKEGDLRAAVDLVSNLELQGITIGP
Sbjct: 17 TRKLQNSPTHAAKLNESARNFQISYKSYLTRISSLCKEGDLRAAVDLVSNLELQGITIGP 76
Query: 79 DVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETKLVIFYSKCDESEIANRLF 138
DVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETKLVIFYSKCDESEIANRLF
Sbjct: 77 DVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETKLVIFYSKCDESEIANRLF 136
Query: 139 RKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLDNFVIPIALKASGSLQWIG 198
RKLRVQN+FSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLDNFVIPIALKASGSLQWIG
Sbjct: 137 RKLRVQNEFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLDNFVIPIALKASGSLQWIG 196
Query: 199 FGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFDKIPEKNIVAWNSMIVNFT 258
FGKAIHGYAVKM LGGCIFVASSLLDMYGKCGVCGDAKKVFDKIPEKNIVAWNSMIV+FT
Sbjct: 197 FGKAIHGYAVKMGLGGCIFVASSLLDMYGKCGVCGDAKKVFDKIPEKNIVAWNSMIVDFT 256
Query: 259 HNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINEGKQGHALAVLSGLELTNI 318
HNGLYEEA+ETFYDMRVEGVEPTQVTLSSFLSASANLSLINEGKQGHALAVLSGLELTNI
Sbjct: 257 HNGLYEEAIETFYDMRVEGVEPTQVTLSSFLSASANLSLINEGKQGHALAVLSGLELTNI 316
Query: 319 LGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVHNGLVDRALGLCRVMQSEN 378
LGSSLINFYSKIGLVEDAE VF EMLEKDVVTWNLLVSGYVHNGLVDRALGLCRVMQSEN
Sbjct: 317 LGSSLINFYSKIGLVEDAELVFGEMLEKDVVTWNLLVSGYVHNGLVDRALGLCRVMQSEN 376
Query: 379 LRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIVDTYAKCGKLECAR 438
LRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIVDTYAKCGKLECAR
Sbjct: 377 LRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIVDTYAKCGKLECAR 436
Query: 439 RVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGLPPNLISWNSVILGLLNKG 498
RVF LTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGLPPNLISWNSVILGLLNKG
Sbjct: 437 RVFHLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGLPPNLISWNSVILGLLNKG 496
Query: 499 EVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFLTFQSMQEAGIKPNSLSIS 558
EVSKAKD+FLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFLTFQSMQEAGIKPNSLSI+
Sbjct: 497 EVSKAKDIFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFLTFQSMQEAGIKPNSLSIN 556
Query: 559 PLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYAKCGSINQAKRIFDMILKK 618
LLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYAKCGSINQAKRIFDMILKK
Sbjct: 557 SLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYAKCGSINQAKRIFDMILKK 616
Query: 619 ELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACSHAGLVTEGLELF 678
ELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFT ILSACSHAGLVTEGLELF
Sbjct: 617 ELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTCILSACSHAGLVTEGLELF 676
Query: 679 IDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFEPDAFIFGSLLAACREHPD 738
IDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFEPDAFIFGSLLAACREHPD
Sbjct: 677 IDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFEPDAFIFGSLLAACREHPD 736
Query: 739 VELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVRDLMKERGLRKTPGHSLIQ 798
VELKERLFERLLKLEPDNSGNYVALSNAY+A GMWDE SKVRDLMKERGL+KTPGHSLIQ
Sbjct: 737 VELKERLFERLLKLEPDNSGNYVALSNAYSAAGMWDEASKVRDLMKERGLKKTPGHSLIQ 796
Query: 799 IGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 841
IGNETHVFFAGDKSHSKTK IYKMLALLRIEMQVTRCI VIS
Sbjct: 797 IGNETHVFFAGDKSHSKTKGIYKMLALLRIEMQVTRCIPVIS 838
BLAST of Carg12168 vs. ExPASy Swiss-Prot
Match:
Q9FM64 (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR21 PE=2 SV=1)
HSP 1 Score: 932.6 bits (2409), Expect = 3.2e-270
Identity = 457/833 (54.86%), Postives = 614/833 (73.71%), Query Frame = 0
Query: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
MA+LPF T P +S +S H + + S SY +R+SSLCK G+++
Sbjct: 1 MASLPF--NTIPNKVPFSVSSKPSSKHHDEQAHSP------SSTSYFHRVSSLCKNGEIK 60
Query: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
A+ LV+ ++ + + IGP++YGE+LQGCVYER LS G+QIH RILKNG+F A+NEYIETK
Sbjct: 61 EALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETK 120
Query: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
LVIFY+KCD EIA LF KLRV+N FSWAAI+G+KCRIG E AL+ F EM EN +F D
Sbjct: 121 LVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 180
Query: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
NFV+P KA G+L+W FG+ +HGY VK L C+FVASSL DMYGKCGV DA KVFD
Sbjct: 181 NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
+IP++N VAWN+++V + NG EEA+ F DMR +GVEPT+VT+S+ LSASAN+ + E
Sbjct: 241 EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
GKQ HA+A+++G+EL NILG+SL+NFY K+GL+E AE VF M EKDVVTWNL++SGYV
Sbjct: 301 GKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 360
Query: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
GLV+ A+ +C++M+ E L++D VTLA++M+AAA + NLKLGKE +C+R++ ESD+ +
Sbjct: 361 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 420
Query: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
AS+++D YAKCG + A++VFD T+++DLI+WNTLLAAYAE G SGE L+LFY MQLEG+
Sbjct: 421 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 480
Query: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
PPN+I+WN +IL LL G+V +AKDMFL+MQS G+ PNL++WTT+++G+ QNG +EA L
Sbjct: 481 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAIL 540
Query: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRR-ELSLSTPVLCSLVNMY 600
+ MQE+G++PN+ SI+ LSAC +ASL GR IHGYI R + S + SLV+MY
Sbjct: 541 FLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMY 600
Query: 601 AKCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFT 660
AKCG IN+A+++F L ELP+ NAMIS YAL+G EA++L+R L+ +KPD IT T
Sbjct: 601 AKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITIT 660
Query: 661 SILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPF 720
++LSAC+HAG + + +E+F D+VS + EHYG +V +L+ ++ALRLI MPF
Sbjct: 661 NVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPF 720
Query: 721 EPDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKV 780
+PDA + SL+A+C + EL + L +LL+ EP+NSGNYV +SNAYA G WDEV K+
Sbjct: 721 KPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKM 780
Query: 781 RDLMKERGLRKTPGHSLIQIGNE--THVFFAGDKSHSKTKEIYKMLALLRIEM 831
R++MK +GL+K PG S IQI E HVF A DK+H++ EI MLALL +M
Sbjct: 781 REMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
BLAST of Carg12168 vs. ExPASy Swiss-Prot
Match:
Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 441.4 bits (1134), Expect = 2.2e-122
Identity = 278/883 (31.48%), Postives = 434/883 (49.15%), Query Frame = 0
Query: 42 SYKSYLNRISSLCKEGD-LRAAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQI 101
++ S L+ SS+ K G LR+ V L N I + +L C E + G+QI
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFEN----QIFPNKFTFSIVLSTCARETNVEFGRQI 186
Query: 102 HGRILKNGEFIAKNEYIETKLVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIG 161
H ++K G + +N Y LV Y+KCD A R+F + N W + + G
Sbjct: 187 HCSMIKMG--LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 246
Query: 162 FNEEALLCFCEMHENGLFLDN--FVIPI-------------------------------- 221
EEA+L F M + G D+ FV I
Sbjct: 247 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 306
Query: 222 --------------------------------ALKASGSLQWIGFGKAIHGYAVKMDLGG 281
L A G + + G +H A+K+ L
Sbjct: 307 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 366
Query: 282 CIFVASSLLDMYGKCGVCGDAKKVFDKIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMR 341
I+V SSL+ MY KC A KVF+ + EKN V WN+MI + HNG + +E F DM+
Sbjct: 367 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 426
Query: 342 VEGVEPTQVTLSSFLSASANLSLINEGKQGHALAVLSGLELTNILGSSLINFYSKIGLVE 401
G T +S LS A + G Q H++ + L +G++L++ Y+K G +E
Sbjct: 427 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 486
Query: 402 DAEPVFSEMLEKDVVTWNLLVSGYVHNGLVDRALGLCRVMQSENLRFDSVTLASIMAAAA 461
DA +F M ++D VTWN ++ YV + A L + M + D LAS + A
Sbjct: 487 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 546
Query: 462 DSRNLKLGKEGHSFCVRNNLESDVAVASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNT 521
L GK+ H V+ L+ D+ SS++D Y+KCG ++ AR+VF + ++ N
Sbjct: 547 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 606
Query: 522 LLAAYAEQGWSGETLKLFYQMQLEGLPPNLISWNSVI----------LGLLNKGEVSK-- 581
L+A Y++ E + LF +M G+ P+ I++ +++ LG G+++K
Sbjct: 607 LIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 666
Query: 582 --AKDMFLEMQSLGVCPN-------------------LVTWTTLISGLAQNGLGDEAFLT 641
++ +L + LG+ N +V WT ++SG +QNG +EA
Sbjct: 667 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 726
Query: 642 FQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYAK 701
++ M+ G+ P+ + +L C+ ++SLR GRAIH I L +L++MYAK
Sbjct: 727 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 786
Query: 702 CGSINQAKRIFD-MILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 761
CG + + ++FD M + + +N++I+GYA +G A +AL +F +++ I PDEITF
Sbjct: 787 CGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 846
Query: 762 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 821
+L+ACSHAG V++G ++F M+ + I A+ +H C+V +L R L EA I A +
Sbjct: 847 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK 906
Query: 822 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 824
PDA ++ SLL ACR H D E E+L++LEP NS YV LSN YA+ G W++ + +R
Sbjct: 907 PDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALR 966
BLAST of Carg12168 vs. ExPASy Swiss-Prot
Match:
Q9FXH1 (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1)
HSP 1 Score: 438.0 bits (1125), Expect = 2.5e-121
Identity = 251/776 (32.35%), Postives = 407/776 (52.45%), Query Frame = 0
Query: 53 LCKEGDLRAAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIA 112
LC+ G L A + +L QG + Y +LL+ C+ ++ LG+ +H R G F
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---GLFTE 115
Query: 113 KNEYIETKLVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEM 172
+ ++ETKL+ Y+KC A ++F +R +N F+W+A++G R E F M
Sbjct: 116 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 175
Query: 173 HENGLFLDNFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVC 232
++G+ D+F+ P L+ + + GK IH +K+ + C+ V++S+L +Y KCG
Sbjct: 176 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 235
Query: 233 GDAKKVFDKIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSAS 292
A K F ++ E++++AWNS+++ + NG +EEAVE +M EG+ P
Sbjct: 236 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP------------ 295
Query: 293 ANLSLINEGKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEM----LEKDV 352
GL NI LI Y+++G + A + +M + DV
Sbjct: 296 -------------------GLVTWNI----LIGGYNQLGKCDAAMDLMQKMETFGITADV 355
Query: 353 VTWNLLVSGYVHNGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSF 412
TW ++SG +HNG+ +AL + R M + ++VT+ S ++A + + + G E HS
Sbjct: 356 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 415
Query: 413 CVRNNLESDVAVASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGET 472
V+ DV V +S+VD Y+KCGKLE AR+VFD +D+ WN+++ Y + G+ G+
Sbjct: 416 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKA 475
Query: 473 LKLFYQMQLEGLPPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLG-VCPNLVTWTTLIS 532
+LF +MQ L PN+I+WN++I G + G+ +A D+F M+ G V N TW +I+
Sbjct: 476 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 535
Query: 533 GLAQNGLGDEAFLTFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSL 592
G QNG DEA F+ MQ + PNS++I LL AC + + R IHG + RR L
Sbjct: 536 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 595
Query: 593 STPVLCSLVNMYAKCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLK 652
V +L + YAK G I ++ IF + K++ +N++I GY LHG AL+LF ++K
Sbjct: 596 IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 655
Query: 653 EECIKPDEITFTSILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNL 712
+ I P+ T +SI+ A G V EG ++F + +++ I+ EH +V + R + L
Sbjct: 656 TQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRL 715
Query: 713 DEALRLILAMPFEPDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAY 772
+EAL+ I M + + I+ S L CR H D+++ E L LEP+N+ +S Y
Sbjct: 716 EEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIY 775
Query: 773 AATGMWDEVSKVRDLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKML 824
A + ++ L+K G S I++ N H F GD+S T +Y ++
Sbjct: 776 ALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLV 793
BLAST of Carg12168 vs. ExPASy Swiss-Prot
Match:
Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 433.3 bits (1113), Expect = 6.1e-120
Identity = 269/867 (31.03%), Postives = 440/867 (50.75%), Query Frame = 0
Query: 17 YSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDL----RAAVDLVSNLE-- 76
Y + ++S A + S + + +L RIS+ C+ GDL R + V + E
Sbjct: 17 YRRSRKESSFPRAVYNSNSISSNSTNANHFLRRISNFCETGDLDKSFRTVQEFVGDDESS 76
Query: 77 LQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETKLVIFYSKCDE 136
+ + G LLQ + + +G++IH +++ + ++ + T+++ Y+ C
Sbjct: 77 SDAFLLVREALGLLLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGS 136
Query: 137 SEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEM-HENGLFLDNFVIPIALK 196
+ + +F LR +N F W A++ R +E L F EM L D+F P +K
Sbjct: 137 PDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIK 196
Query: 197 ASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFDKIPEKNIVA 256
A + +G G A+HG VK L +FV ++L+ YG G DA ++FD +PE+N+V+
Sbjct: 197 ACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVS 256
Query: 257 WNSMIVNFTHNGLYEEAVETFYDMRVEGVE----PTQVTLSSFLSASANLSLINEGKQGH 316
WNSMI F+ NG EE+ +M E + P TL + L A I GK H
Sbjct: 257 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 316
Query: 317 ALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVHNGLVD 376
AV L+ +L ++L++ YSK G + +A+ +F K+VV+WN +V G+ G
Sbjct: 317 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 376
Query: 377 RALGLCRVMQS--ENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASS 436
+ R M + E+++ D VT+ + + L KE H + ++ + VA++
Sbjct: 377 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 436
Query: 437 IVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGLPP- 496
V +YAKCG L A+RVF + + WN L+ +A+ +L QM++ GL P
Sbjct: 437 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 496
Query: 497 ----------------------------------NLISWNSVILGLLNKGEVSKAKDMFL 556
+L + SV+ ++ GE+ + +F
Sbjct: 497 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 556
Query: 557 EMQSLGVCPNLVTWTTLISGLAQNGLGDEAFLTFQSMQEAGIKPNSLSISPLLSACTTMA 616
M+ +LV+W T+I+G QNG D A F+ M GI+ +S+ P+ AC+ +
Sbjct: 557 AMED----KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 616
Query: 617 SLRHGRAIHGYITRRELSLSTPVLCSLVNMYAKCGSINQAKRIFDMILKKELPIYNAMIS 676
SLR GR H Y + L + CSL++MYAK GSI Q+ ++F+ + +K +NAMI
Sbjct: 617 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 676
Query: 677 GYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACSHAGLVTEGLELFIDMVSNHKIV 736
GY +HG A EA+ LF ++ PD++TF +L+AC+H+GL+ EGL M S+ +
Sbjct: 677 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 736
Query: 737 AQAEHYGCLVSILSRCHNLDEALRLIL-AMPFEPDAFIFGSLLAACREHPDVELKERLFE 796
+HY C++ +L R LD+ALR++ M E D I+ SLL++CR H ++E+ E++
Sbjct: 737 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAA 796
Query: 797 RLLKLEPDNSGNYVALSNAYAATGMWDEVSKVRDLMKERGLRKTPGHSLIQIGNETHVFF 835
+L +LEP+ NYV LSN YA G W++V KVR M E LRK G S I++ + F
Sbjct: 797 KLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFV 856
BLAST of Carg12168 vs. ExPASy Swiss-Prot
Match:
Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-119
Identity = 256/778 (32.90%), Postives = 416/778 (53.47%), Query Frame = 0
Query: 79 DVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETKLVIFYSKCDESEIANRLF 138
+ + +L+ C RA+S G+Q+H RI K + +++ KLV Y KC + A ++F
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSF-ELDFLAGKLVFMYGKCGSLDDAEKVF 140
Query: 139 RKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLDNFVIPIALKASGSLQWIG 198
++ + F+W ++G G AL + M G+ L P LKA L+ I
Sbjct: 141 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 200
Query: 199 FGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFDKIPEK-NIVAWNSMIVNF 258
G +H VK+ F+ ++L+ MY K A+++FD EK + V WNS++ ++
Sbjct: 201 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 260
Query: 259 THNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINEGKQGHALAVLSGLELTN 318
+ +G E +E F +M + G P T+ S L+A S GK+ HA + S +
Sbjct: 261 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 320
Query: 319 I-LGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVHNGLVDRALGLCRVMQS 378
+ + ++LI Y++ G + AE + +M DVVTWN L+ GYV N + AL M +
Sbjct: 321 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 380
Query: 379 ENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIVDTYAKCGKLEC 438
+ D V++ SI+AA+ NL G E H++ +++ +S++ V ++++D Y+KC
Sbjct: 381 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 440
Query: 439 ARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLF-----YQMQLEGLPPNLISWNSVI 498
R F +DLI W T++A YA+ E L+LF +M+++ + I S +
Sbjct: 441 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 500
Query: 499 L----------------GLLNKGEVSKAKDMFLEMQSLGVC---------PNLVTWTTLI 558
L GLL+ ++ D++ + +++G ++V+WT++I
Sbjct: 501 LKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMI 560
Query: 559 SGLAQNGLGDEAFLTFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELS 618
S A NG EA F+ M E G+ +S+++ +LSA ++++L GR IH Y+ R+
Sbjct: 561 SSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFC 620
Query: 619 LSTPVLCSLVNMYAKCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRL 678
L + ++V+MYA CG + AK +FD I +K L Y +MI+ Y +HG A+ LF ++
Sbjct: 621 LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 680
Query: 679 KEECIKPDEITFTSILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHN 738
+ E + PD I+F ++L ACSHAGL+ EG M +++ EHY CLV +L R +
Sbjct: 681 RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANC 740
Query: 739 LDEALRLILAMPFEPDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNA 798
+ EA + M EP A ++ +LLAACR H + E+ E +RLL+LEP N GN V +SN
Sbjct: 741 VVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNV 800
Query: 799 YAATGMWDEVSKVRDLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLA 825
+A G W++V KVR MK G+ K PG S I++ + H F A DKSH ++KEIY+ L+
Sbjct: 801 FAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLS 857
BLAST of Carg12168 vs. ExPASy TrEMBL
Match:
A0A6J1EZY3 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441078 PE=4 SV=1)
HSP 1 Score: 1646.7 bits (4263), Expect = 0.0e+00
Identity = 825/840 (98.21%), Postives = 831/840 (98.93%), Query Frame = 0
Query: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
MA+LPFVTPTYPLATLYSTRKLQNS THAAKLNESAGNFQISYKSYLNRISSLCKEGDLR
Sbjct: 1 MASLPFVTPTYPLATLYSTRKLQNSPTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
Query: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
AAVDLVSN ELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK
Sbjct: 61 AAVDLVSNFELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
Query: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
LVIFYSKCDESEIANRLFRKLRVQN+FSWAAIMGLKCRIGFNEEALLC CEMHENGLFLD
Sbjct: 121 LVIFYSKCDESEIANRLFRKLRVQNEFSWAAIMGLKCRIGFNEEALLCCCEMHENGLFLD 180
Query: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
NFVIPIALKA+GSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD
Sbjct: 181 NFVIPIALKAAGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE
Sbjct: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAE VFSEMLEKDVVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAELVFSEMLEKDVVTWNLLVSGYVH 360
Query: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
ASSIVDTYAKCGKLECARRVFDL IKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDTYAKCGKLECARRVFDLAIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
Query: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL
Sbjct: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
Query: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
TFQ MQEAGIKPNSLSISPLLSACT MASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA
Sbjct: 541 TFQLMQEAGIKPNSLSISPLLSACTAMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS
Sbjct: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
I+SACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRL+LAMPFE
Sbjct: 661 IISACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLVLAMPFE 720
Query: 721 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 780
PDAFIFGSLLAACREHPD+ELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDE SKVR
Sbjct: 721 PDAFIFGSLLAACREHPDIELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 840
DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHV S
Sbjct: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVTS 840
BLAST of Carg12168 vs. ExPASy TrEMBL
Match:
A0A6J1KT20 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111497958 PE=4 SV=1)
HSP 1 Score: 1596.3 bits (4132), Expect = 0.0e+00
Identity = 802/822 (97.57%), Postives = 809/822 (98.42%), Query Frame = 0
Query: 19 TRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLRAAVDLVSNLELQGITIGP 78
TRKLQNS THAAKLNESA NFQISYKSYL RISSLCKEGDLRAAVDLVSNLELQGITIGP
Sbjct: 17 TRKLQNSPTHAAKLNESARNFQISYKSYLTRISSLCKEGDLRAAVDLVSNLELQGITIGP 76
Query: 79 DVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETKLVIFYSKCDESEIANRLF 138
DVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETKLVIFYSKCDESEIANRLF
Sbjct: 77 DVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETKLVIFYSKCDESEIANRLF 136
Query: 139 RKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLDNFVIPIALKASGSLQWIG 198
RKLRVQN+FSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLDNFVIPIALKASGSLQWIG
Sbjct: 137 RKLRVQNEFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLDNFVIPIALKASGSLQWIG 196
Query: 199 FGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFDKIPEKNIVAWNSMIVNFT 258
FGKAIHGYAVKM LGGCIFVASSLLDMYGKCGVCGDAKKVFDKIPEKNIVAWNSMIV+FT
Sbjct: 197 FGKAIHGYAVKMGLGGCIFVASSLLDMYGKCGVCGDAKKVFDKIPEKNIVAWNSMIVDFT 256
Query: 259 HNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINEGKQGHALAVLSGLELTNI 318
HNGLYEEA+ETFYDMRVEGVEPTQVTLSSFLSASANLSLINEGKQGHALAVLSGLELTNI
Sbjct: 257 HNGLYEEAIETFYDMRVEGVEPTQVTLSSFLSASANLSLINEGKQGHALAVLSGLELTNI 316
Query: 319 LGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVHNGLVDRALGLCRVMQSEN 378
LGSSLINFYSKIGLVEDAE VF EMLEKDVVTWNLLVSGYVHNGLVDRALGLCRVMQSEN
Sbjct: 317 LGSSLINFYSKIGLVEDAELVFGEMLEKDVVTWNLLVSGYVHNGLVDRALGLCRVMQSEN 376
Query: 379 LRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIVDTYAKCGKLECAR 438
LRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIVDTYAKCGKLECAR
Sbjct: 377 LRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIVDTYAKCGKLECAR 436
Query: 439 RVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGLPPNLISWNSVILGLLNKG 498
RVF LTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGLPPNLISWNSVILGLLNKG
Sbjct: 437 RVFHLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGLPPNLISWNSVILGLLNKG 496
Query: 499 EVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFLTFQSMQEAGIKPNSLSIS 558
EVSKAKD+FLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFLTFQSMQEAGIKPNSLSI+
Sbjct: 497 EVSKAKDIFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFLTFQSMQEAGIKPNSLSIN 556
Query: 559 PLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYAKCGSINQAKRIFDMILKK 618
LLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYAKCGSINQAKRIFDMILKK
Sbjct: 557 SLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYAKCGSINQAKRIFDMILKK 616
Query: 619 ELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACSHAGLVTEGLELF 678
ELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFT ILSACSHAGLVTEGLELF
Sbjct: 617 ELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTCILSACSHAGLVTEGLELF 676
Query: 679 IDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFEPDAFIFGSLLAACREHPD 738
IDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFEPDAFIFGSLLAACREHPD
Sbjct: 677 IDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFEPDAFIFGSLLAACREHPD 736
Query: 739 VELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVRDLMKERGLRKTPGHSLIQ 798
VELKERLFERLLKLEPDNSGNYVALSNAY+A GMWDE SKVRDLMKERGL+KTPGHSLIQ
Sbjct: 737 VELKERLFERLLKLEPDNSGNYVALSNAYSAAGMWDEASKVRDLMKERGLKKTPGHSLIQ 796
Query: 799 IGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 841
IGNETHVFFAGDKSHSKTK IYKMLALLRIEMQVTRCI VIS
Sbjct: 797 IGNETHVFFAGDKSHSKTKGIYKMLALLRIEMQVTRCIPVIS 838
BLAST of Carg12168 vs. ExPASy TrEMBL
Match:
A0A5D3BG60 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00190 PE=4 SV=1)
HSP 1 Score: 1458.7 bits (3775), Expect = 0.0e+00
Identity = 735/840 (87.50%), Postives = 775/840 (92.26%), Query Frame = 0
Query: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
MAALPF PT PL +LY+ RKL NS T+ A LN+ AGN QISYKSYLN+ISSLCK+G L
Sbjct: 1 MAALPFPLPTNPLPSLYTPRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
A+DLV++LEL ITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGE+IAKNEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
LVIFYSKCDESE ANRLF KL+VQN+FSWAAIMGLK R+ FNEEAL+ F EMHE GL LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
NFVIPIALKASG+L+WIGFGK++HGY VKM LG CI+VASSLLDMYGKCG+CGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
KIPEKNIVAWNSMIV+FT NG EA+ETFY+MRVEGV PTQVTLSSFLSASANL +I E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSK+GLVE+AE VFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVDRALGLC VMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
ASSI+D YAKC LECARRVF+ IKRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
PPN+ISWNSVILGLLNKGEV KAKDMF+EMQSLG+CPNL+TWTTLI GLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
TFQSM+EAGIKPNSLSIS LLSAC+TMASL HGRAIH YITRRELS+STPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
KCGSINQAKR+FDMILKKELP+YNAMISGYALHGQA EALSLFRRLKEE IKPDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEEYIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
ILSACSHAGLV EGLELFIDMVSNHKIVAQAEHYGCLVSILSR HNLDEALRLIL MPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 780
PDAFIFGSLL ACREHPD ELKE LFERLLKLEPDNSGNYVALSNAYAATGMWDE KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 840
LMKER LRK PGHSLIQIGN+THVFFAGDKSHS+TKEIY LALLR+EMQ TRCI VIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of Carg12168 vs. ExPASy TrEMBL
Match:
A0A1S3CJ17 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501523 PE=4 SV=1)
HSP 1 Score: 1457.6 bits (3772), Expect = 0.0e+00
Identity = 734/840 (87.38%), Postives = 776/840 (92.38%), Query Frame = 0
Query: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
MAALPF PT PL +LY++RKL NS T+ A LN+ AGN QISYKSYLN+ISSLCK+G L
Sbjct: 1 MAALPFPLPTNPLPSLYTSRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
A+DLV++LEL ITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGE+IAKNEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
LVIFYSKCDESE ANRLF KL+VQN+FSWAAIMGLK R+ FNEEAL+ F EMHE GL LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
NFVIPIALKASG+L+WIGFGK++HGY VKM LG CI+VASSLLDMYGKCG+CGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
KIPEKNIVAWNSMIV+FT NG EA+ETFY+MRVEGV PTQVTLSSFLSASANL +I E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSK+GLVE+AE VFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVDRALGLC VMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
ASSI+D YAKC LECARRVF+ IKRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
PPN+ISWNSVILGLLNKGEV KAKDMF+EMQSLG+CPNL+TWTTLI GLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
TFQSM+EAGIKPNSLSIS LLSAC+TMASL HGRAIH YITRRELS+STPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
KCGSINQAKR+FDMILKKELP+YNAMISGYALHGQA EALSLFRRLKEECIKPDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
ILSACSHAGLV EGLELFIDMVS HKIVAQAEHYGCLVSILSR HNLDEALRLIL MPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSFHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 780
PDAFIFGSLL ACREHPD ELKE LFERLLKLEPDNSGNYVALSNAYAATGMWDE KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 840
LMKER LRK PGHSLIQIGN+THVFFAGDKS+S+TKEIY LALLR+EMQ TRCI VIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSNSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of Carg12168 vs. ExPASy TrEMBL
Match:
A0A5A7TJA9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00310 PE=4 SV=1)
HSP 1 Score: 1457.6 bits (3772), Expect = 0.0e+00
Identity = 734/840 (87.38%), Postives = 776/840 (92.38%), Query Frame = 0
Query: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
MAALPF PT PL +LY++RKL NS T+ A LN+ AGN QISYKSYLN+ISSLCK+G L
Sbjct: 1 MAALPFPLPTNPLPSLYTSRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
A+DLV++LEL ITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGE+IAKNEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
LVIFYSKCDESE ANRLF KL+VQN+FSWAAIMGLK R+ FNEEAL+ F EMHE GL LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
NFVIPIALKASG+L+WIGFGK++HGY VKM LG CI+VASSLLDMYGKCG+CGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
KIPEKNIVAWNSMIV+FT NG EA+ETFY+MRVEGV PTQVTLSSFLSASANL +I E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
GKQGHALAVLSGLELTNILGSSLINFYSK+GLVE+AE VFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
NGLVDRALGLC VMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
ASSI+D YAKC LECARRVF+ IKRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
PPN+ISWNSVILGLLNKGEV KAKDMF+EMQSLG+CPNL+TWTTLI GLAQNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
TFQSM+EAGIKPNSLSIS LLSAC+TMASL HGRAIH YITRRELS+STPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
KCGSINQAKR+FDMILKKELP+YNAMISGYALHGQA EALSLFRRLKEECIKPDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
ILSACSHAGLV EGLELFIDMVS HKIVAQAEHYGCLVSILSR HNLDEALRLIL MPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSFHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 780
PDAFIFGSLL ACREHPD ELKE LFERLLKLEPDNSGNYVALSNAYAATGMWDE KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 840
LMKER LRK PGHSLIQIGN+THVFFAGDKS+S+TKEIY LALLR+EMQ TRCI VIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSNSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of Carg12168 vs. TAIR 10
Match:
AT5G55740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 932.6 bits (2409), Expect = 2.3e-271
Identity = 457/833 (54.86%), Postives = 614/833 (73.71%), Query Frame = 0
Query: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
MA+LPF T P +S +S H + + S SY +R+SSLCK G+++
Sbjct: 1 MASLPF--NTIPNKVPFSVSSKPSSKHHDEQAHSP------SSTSYFHRVSSLCKNGEIK 60
Query: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
A+ LV+ ++ + + IGP++YGE+LQGCVYER LS G+QIH RILKNG+F A+NEYIETK
Sbjct: 61 EALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETK 120
Query: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
LVIFY+KCD EIA LF KLRV+N FSWAAI+G+KCRIG E AL+ F EM EN +F D
Sbjct: 121 LVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 180
Query: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
NFV+P KA G+L+W FG+ +HGY VK L C+FVASSL DMYGKCGV DA KVFD
Sbjct: 181 NFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
+IP++N VAWN+++V + NG EEA+ F DMR +GVEPT+VT+S+ LSASAN+ + E
Sbjct: 241 EIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEE 300
Query: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
GKQ HA+A+++G+EL NILG+SL+NFY K+GL+E AE VF M EKDVVTWNL++SGYV
Sbjct: 301 GKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ 360
Query: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
GLV+ A+ +C++M+ E L++D VTLA++M+AAA + NLKLGKE +C+R++ ESD+ +
Sbjct: 361 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 420
Query: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
AS+++D YAKCG + A++VFD T+++DLI+WNTLLAAYAE G SGE L+LFY MQLEG+
Sbjct: 421 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 480
Query: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
PPN+I+WN +IL LL G+V +AKDMFL+MQS G+ PNL++WTT+++G+ QNG +EA L
Sbjct: 481 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAIL 540
Query: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRR-ELSLSTPVLCSLVNMY 600
+ MQE+G++PN+ SI+ LSAC +ASL GR IHGYI R + S + SLV+MY
Sbjct: 541 FLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMY 600
Query: 601 AKCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFT 660
AKCG IN+A+++F L ELP+ NAMIS YAL+G EA++L+R L+ +KPD IT T
Sbjct: 601 AKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITIT 660
Query: 661 SILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPF 720
++LSAC+HAG + + +E+F D+VS + EHYG +V +L+ ++ALRLI MPF
Sbjct: 661 NVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPF 720
Query: 721 EPDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKV 780
+PDA + SL+A+C + EL + L +LL+ EP+NSGNYV +SNAYA G WDEV K+
Sbjct: 721 KPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKM 780
Query: 781 RDLMKERGLRKTPGHSLIQIGNE--THVFFAGDKSHSKTKEIYKMLALLRIEM 831
R++MK +GL+K PG S IQI E HVF A DK+H++ EI MLALL +M
Sbjct: 781 REMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
BLAST of Carg12168 vs. TAIR 10
Match:
AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 441.4 bits (1134), Expect = 1.6e-123
Identity = 278/883 (31.48%), Postives = 434/883 (49.15%), Query Frame = 0
Query: 42 SYKSYLNRISSLCKEGD-LRAAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQI 101
++ S L+ SS+ K G LR+ V L N I + +L C E + G+QI
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFEN----QIFPNKFTFSIVLSTCARETNVEFGRQI 186
Query: 102 HGRILKNGEFIAKNEYIETKLVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIG 161
H ++K G + +N Y LV Y+KCD A R+F + N W + + G
Sbjct: 187 HCSMIKMG--LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 246
Query: 162 FNEEALLCFCEMHENGLFLDN--FVIPI-------------------------------- 221
EEA+L F M + G D+ FV I
Sbjct: 247 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 306
Query: 222 --------------------------------ALKASGSLQWIGFGKAIHGYAVKMDLGG 281
L A G + + G +H A+K+ L
Sbjct: 307 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 366
Query: 282 CIFVASSLLDMYGKCGVCGDAKKVFDKIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMR 341
I+V SSL+ MY KC A KVF+ + EKN V WN+MI + HNG + +E F DM+
Sbjct: 367 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 426
Query: 342 VEGVEPTQVTLSSFLSASANLSLINEGKQGHALAVLSGLELTNILGSSLINFYSKIGLVE 401
G T +S LS A + G Q H++ + L +G++L++ Y+K G +E
Sbjct: 427 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 486
Query: 402 DAEPVFSEMLEKDVVTWNLLVSGYVHNGLVDRALGLCRVMQSENLRFDSVTLASIMAAAA 461
DA +F M ++D VTWN ++ YV + A L + M + D LAS + A
Sbjct: 487 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 546
Query: 462 DSRNLKLGKEGHSFCVRNNLESDVAVASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNT 521
L GK+ H V+ L+ D+ SS++D Y+KCG ++ AR+VF + ++ N
Sbjct: 547 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 606
Query: 522 LLAAYAEQGWSGETLKLFYQMQLEGLPPNLISWNSVI----------LGLLNKGEVSK-- 581
L+A Y++ E + LF +M G+ P+ I++ +++ LG G+++K
Sbjct: 607 LIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 666
Query: 582 --AKDMFLEMQSLGVCPN-------------------LVTWTTLISGLAQNGLGDEAFLT 641
++ +L + LG+ N +V WT ++SG +QNG +EA
Sbjct: 667 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 726
Query: 642 FQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYAK 701
++ M+ G+ P+ + +L C+ ++SLR GRAIH I L +L++MYAK
Sbjct: 727 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 786
Query: 702 CGSINQAKRIFD-MILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 761
CG + + ++FD M + + +N++I+GYA +G A +AL +F +++ I PDEITF
Sbjct: 787 CGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 846
Query: 762 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 821
+L+ACSHAG V++G ++F M+ + I A+ +H C+V +L R L EA I A +
Sbjct: 847 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK 906
Query: 822 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 824
PDA ++ SLL ACR H D E E+L++LEP NS YV LSN YA+ G W++ + +R
Sbjct: 907 PDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALR 966
BLAST of Carg12168 vs. TAIR 10
Match:
AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 438.0 bits (1125), Expect = 1.8e-122
Identity = 251/776 (32.35%), Postives = 407/776 (52.45%), Query Frame = 0
Query: 53 LCKEGDLRAAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIA 112
LC+ G L A + +L QG + Y +LL+ C+ ++ LG+ +H R G F
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---GLFTE 115
Query: 113 KNEYIETKLVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEM 172
+ ++ETKL+ Y+KC A ++F +R +N F+W+A++G R E F M
Sbjct: 116 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 175
Query: 173 HENGLFLDNFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVC 232
++G+ D+F+ P L+ + + GK IH +K+ + C+ V++S+L +Y KCG
Sbjct: 176 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 235
Query: 233 GDAKKVFDKIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSAS 292
A K F ++ E++++AWNS+++ + NG +EEAVE +M EG+ P
Sbjct: 236 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP------------ 295
Query: 293 ANLSLINEGKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEM----LEKDV 352
GL NI LI Y+++G + A + +M + DV
Sbjct: 296 -------------------GLVTWNI----LIGGYNQLGKCDAAMDLMQKMETFGITADV 355
Query: 353 VTWNLLVSGYVHNGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSF 412
TW ++SG +HNG+ +AL + R M + ++VT+ S ++A + + + G E HS
Sbjct: 356 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 415
Query: 413 CVRNNLESDVAVASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGET 472
V+ DV V +S+VD Y+KCGKLE AR+VFD +D+ WN+++ Y + G+ G+
Sbjct: 416 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKA 475
Query: 473 LKLFYQMQLEGLPPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLG-VCPNLVTWTTLIS 532
+LF +MQ L PN+I+WN++I G + G+ +A D+F M+ G V N TW +I+
Sbjct: 476 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 535
Query: 533 GLAQNGLGDEAFLTFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSL 592
G QNG DEA F+ MQ + PNS++I LL AC + + R IHG + RR L
Sbjct: 536 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 595
Query: 593 STPVLCSLVNMYAKCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLK 652
V +L + YAK G I ++ IF + K++ +N++I GY LHG AL+LF ++K
Sbjct: 596 IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMK 655
Query: 653 EECIKPDEITFTSILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNL 712
+ I P+ T +SI+ A G V EG ++F + +++ I+ EH +V + R + L
Sbjct: 656 TQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRL 715
Query: 713 DEALRLILAMPFEPDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAY 772
+EAL+ I M + + I+ S L CR H D+++ E L LEP+N+ +S Y
Sbjct: 716 EEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIY 775
Query: 773 AATGMWDEVSKVRDLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKML 824
A + ++ L+K G S I++ N H F GD+S T +Y ++
Sbjct: 776 ALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLV 793
BLAST of Carg12168 vs. TAIR 10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 433.3 bits (1113), Expect = 4.3e-121
Identity = 269/867 (31.03%), Postives = 440/867 (50.75%), Query Frame = 0
Query: 17 YSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDL----RAAVDLVSNLE-- 76
Y + ++S A + S + + +L RIS+ C+ GDL R + V + E
Sbjct: 17 YRRSRKESSFPRAVYNSNSISSNSTNANHFLRRISNFCETGDLDKSFRTVQEFVGDDESS 76
Query: 77 LQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETKLVIFYSKCDE 136
+ + G LLQ + + +G++IH +++ + ++ + T+++ Y+ C
Sbjct: 77 SDAFLLVREALGLLLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGS 136
Query: 137 SEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEM-HENGLFLDNFVIPIALK 196
+ + +F LR +N F W A++ R +E L F EM L D+F P +K
Sbjct: 137 PDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIK 196
Query: 197 ASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFDKIPEKNIVA 256
A + +G G A+HG VK L +FV ++L+ YG G DA ++FD +PE+N+V+
Sbjct: 197 ACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVS 256
Query: 257 WNSMIVNFTHNGLYEEAVETFYDMRVEGVE----PTQVTLSSFLSASANLSLINEGKQGH 316
WNSMI F+ NG EE+ +M E + P TL + L A I GK H
Sbjct: 257 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 316
Query: 317 ALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVHNGLVD 376
AV L+ +L ++L++ YSK G + +A+ +F K+VV+WN +V G+ G
Sbjct: 317 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 376
Query: 377 RALGLCRVMQS--ENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASS 436
+ R M + E+++ D VT+ + + L KE H + ++ + VA++
Sbjct: 377 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 436
Query: 437 IVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGLPP- 496
V +YAKCG L A+RVF + + WN L+ +A+ +L QM++ GL P
Sbjct: 437 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 496
Query: 497 ----------------------------------NLISWNSVILGLLNKGEVSKAKDMFL 556
+L + SV+ ++ GE+ + +F
Sbjct: 497 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 556
Query: 557 EMQSLGVCPNLVTWTTLISGLAQNGLGDEAFLTFQSMQEAGIKPNSLSISPLLSACTTMA 616
M+ +LV+W T+I+G QNG D A F+ M GI+ +S+ P+ AC+ +
Sbjct: 557 AMED----KSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 616
Query: 617 SLRHGRAIHGYITRRELSLSTPVLCSLVNMYAKCGSINQAKRIFDMILKKELPIYNAMIS 676
SLR GR H Y + L + CSL++MYAK GSI Q+ ++F+ + +K +NAMI
Sbjct: 617 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 676
Query: 677 GYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACSHAGLVTEGLELFIDMVSNHKIV 736
GY +HG A EA+ LF ++ PD++TF +L+AC+H+GL+ EGL M S+ +
Sbjct: 677 GYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLK 736
Query: 737 AQAEHYGCLVSILSRCHNLDEALRLIL-AMPFEPDAFIFGSLLAACREHPDVELKERLFE 796
+HY C++ +L R LD+ALR++ M E D I+ SLL++CR H ++E+ E++
Sbjct: 737 PNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAA 796
Query: 797 RLLKLEPDNSGNYVALSNAYAATGMWDEVSKVRDLMKERGLRKTPGHSLIQIGNETHVFF 835
+L +LEP+ NYV LSN YA G W++V KVR M E LRK G S I++ + F
Sbjct: 797 KLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFV 856
BLAST of Carg12168 vs. TAIR 10
Match:
AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 431.8 bits (1109), Expect = 1.3e-120
Identity = 256/778 (32.90%), Postives = 416/778 (53.47%), Query Frame = 0
Query: 79 DVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETKLVIFYSKCDESEIANRLF 138
+ + +L+ C RA+S G+Q+H RI K + +++ KLV Y KC + A ++F
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSF-ELDFLAGKLVFMYGKCGSLDDAEKVF 140
Query: 139 RKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLDNFVIPIALKASGSLQWIG 198
++ + F+W ++G G AL + M G+ L P LKA L+ I
Sbjct: 141 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 200
Query: 199 FGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFDKIPEK-NIVAWNSMIVNF 258
G +H VK+ F+ ++L+ MY K A+++FD EK + V WNS++ ++
Sbjct: 201 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 260
Query: 259 THNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINEGKQGHALAVLSGLELTN 318
+ +G E +E F +M + G P T+ S L+A S GK+ HA + S +
Sbjct: 261 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 320
Query: 319 I-LGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVHNGLVDRALGLCRVMQS 378
+ + ++LI Y++ G + AE + +M DVVTWN L+ GYV N + AL M +
Sbjct: 321 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIA 380
Query: 379 ENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIVDTYAKCGKLEC 438
+ D V++ SI+AA+ NL G E H++ +++ +S++ V ++++D Y+KC
Sbjct: 381 AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCY 440
Query: 439 ARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLF-----YQMQLEGLPPNLISWNSVI 498
R F +DLI W T++A YA+ E L+LF +M+++ + I S +
Sbjct: 441 MGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSV 500
Query: 499 L----------------GLLNKGEVSKAKDMFLEMQSLGVC---------PNLVTWTTLI 558
L GLL+ ++ D++ + +++G ++V+WT++I
Sbjct: 501 LKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMI 560
Query: 559 SGLAQNGLGDEAFLTFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELS 618
S A NG EA F+ M E G+ +S+++ +LSA ++++L GR IH Y+ R+
Sbjct: 561 SSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFC 620
Query: 619 LSTPVLCSLVNMYAKCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRL 678
L + ++V+MYA CG + AK +FD I +K L Y +MI+ Y +HG A+ LF ++
Sbjct: 621 LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 680
Query: 679 KEECIKPDEITFTSILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHN 738
+ E + PD I+F ++L ACSHAGL+ EG M +++ EHY CLV +L R +
Sbjct: 681 RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANC 740
Query: 739 LDEALRLILAMPFEPDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNA 798
+ EA + M EP A ++ +LLAACR H + E+ E +RLL+LEP N GN V +SN
Sbjct: 741 VVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNV 800
Query: 799 YAATGMWDEVSKVRDLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLA 825
+A G W++V KVR MK G+ K PG S I++ + H F A DKSH ++KEIY+ L+
Sbjct: 801 FAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLS 857
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7021821.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022933760.1 | 0.0e+00 | 98.21 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita ... | [more] |
KAG6587934.1 | 0.0e+00 | 98.80 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_023531196.1 | 0.0e+00 | 97.86 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita ... | [more] |
XP_023004766.1 | 0.0e+00 | 97.57 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9FM64 | 3.2e-270 | 54.86 | Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidop... | [more] |
Q9SS83 | 2.2e-122 | 31.48 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
Q9FXH1 | 2.5e-121 | 32.35 | Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX... | [more] |
Q0WN60 | 6.1e-120 | 31.03 | Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... | [more] |
Q9M1V3 | 1.8e-119 | 32.90 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EZY3 | 0.0e+00 | 98.21 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucurbit... | [more] |
A0A6J1KT20 | 0.0e+00 | 97.57 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucurbit... | [more] |
A0A5D3BG60 | 0.0e+00 | 87.50 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3CJ17 | 0.0e+00 | 87.38 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucumis ... | [more] |
A0A5A7TJA9 | 0.0e+00 | 87.38 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT5G55740.1 | 2.3e-271 | 54.86 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G09040.1 | 1.6e-123 | 31.48 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G19720.1 | 1.8e-122 | 32.35 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G18485.1 | 4.3e-121 | 31.03 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G63370.1 | 1.3e-120 | 32.90 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |