Carg12138 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12138
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Zinc finger, RING-CH-type
Location	Carg_Chr11: 2411713 .. 2414461 (+)
RNA-Seq Expression	Carg12138
Synteny	Carg12138

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCAAAAACTGTTCGGTTCCAAGAATTATTTTAAAAACATCTGCTTTCTTCAACATTTCTATGATACTTCACATTAATATTCATCAACATCTGCAAAAAGTCCAGTCCGAATATTTCCTCGATTTCAGGTACTCCATTTGGAGCTCTCTAATTTCTTTTTATTCCAATTACTTTTTACAAGTTTTCTTTTTGTGTTAATTTGGATGAACGATGGATTGACTTCCATATATTTAATTCTAATTCTGGGTGATGGTTTTTGATCTTTGTGAATTTGTGATCAAGTTTGTTCTAGGGCTGAAAGCTTCGGTCGTTCTCTTTCGGGTAAGGAGATAACCAATGAAAGGGGAAGTACAGTTGGAATCGTCTATTGCCCAAAAACCTACTGACTCTGACCCTCTGCTTGAGAATCAGTCCGATTCATCCCATGGTGGAACCTCCGATGAAATCAGGGACGATGAGGATGCTGAAGCTGGTTCCATTCCCTGTTGTCGTATTTGCCTAGAGAGCGACGCTGAACCAGGTCAATTTCATCGTTACTTTCGTCGTTGGATGTTTATTTTCTTTCTTAATTCATGCTCGGTTAAACAATTTAGATGTTGGCGCAATTCTGTTGAATTTTAGCTTCATTGCATCTTGGGGGGTAATACCACTGATTATTACAGTCATATACGAGTTTTCATAGCTGGGGTAATATCTTCTTCCACTGGCTCAAATCCAATTTTCCATTTTACAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCATTAAGGCAAATTTCTTTATTTTAGTTCTTTTACTCTGTTCCTGCTTTCGACTATCAAGGATTTGTTTGTTTCCTATTCTATTTTCTTATGGTTTTAATCAATCTGATAGGATTCCCGTAATTCTGCAGGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCATCTGAAAGTTTCCTTATTTGAGGACAGCTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGGGATGTTCTCCTTGTATTTCTAGCTGTTCAAACTGTGAGTTCACTTAAACTTCCTATGATTCTAAATTCAATTCGAATTCTCTTTTCCTGAAATGCATGAGAAAATTAAATGTTTAAACATAAACTACTACGGAAAATCTTGTCTGCACTTTGATAATTGAGGGTTTATCCCTTTTGCAGTTAATAGCTGCAATAGGTGGTTATGCGTATATTATGGACAAAGATGGGGCATTCAGAAATTCTTTCAGTGATGGATGGGATCGTATTCTCTCCAAACATCCTATTCCATTTTATTACTGTATTGGTAAACTACTTTTATCTAAACTGGTCAAATTTTTCTTTAAGAATTGGGTCTTAGACGTCTCAGATTATCACAAATACAAATGCTTTTATTGATAAATTCAGGCTTTGTTGTTCATTTATACTTGAGATAAAGTAGCAAGGATGTCAAATCTCTCATTTTATTCGTGTTGAAAACTTGTTACTAGTTATTGACGGAAAATGGATATCTTCATCTACCTTCCTGTCAAAATAATTATGTTACCGTGGTATGGGAAACGAATCATTCTTTATAAGGATGTGAAAACTTATCCCTAGCAGATGCGTTTTAAAATCTTGAGGGGGAGCCCGGAAGGAAAAGCCCAAAGAAGACAATATCCGCTAGTGAAGGGCTTGGGCTTGGGCTGTTACACATTGACGTATTAACACTCCCCTTTCCCCTGAAAACTGTGTGAAATCTTTCATTTAAGTTGACTGTGTGTAAAATTAACTTCTGCGTCCATTTTGAATTTGATGTTGAGGTTTTGTCTTTGAATAAAGCTCCATTGTTCACCCATTTCTTTCTGAACATTTTTCGTCTTCTAAATTTCATGGTTAGAAGAGCTATCGGATTAATTATGCATTATCGACAACTTGTTTCATGGAGATTTGATTTCTTAATGTATTATTGTATGCGTGTTTTCCTTATGCCAGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATACTACATTGTTCCTCCCTGAATAGTAACGATCCACGAGTTGCTGGGTGTCACAACTGTTGCTATGGCTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCCTGCTTTGCACTAGTTATTGTTTTCATCGTTATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCTACTATGGCTATTCAAAGGATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGTAAAGCTCTAAACCCGTTTTTGTTTTTTGTTAGTGGATATCATACCTGTTGCTGGTTTTTATACTTCACTTTTCTGTAGGAATATGTGGTGGAGGATCTACACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAGCACTTGAAAATGCTACAGCTCCTGTAATGAATGGCAGATGAGGTGTTAAATTTTCATTTTGTTTGCTATGATCTTTTGTTTGAGACGATACAATGTGCATTTGCTTGACTGCGTTGTTATAAATGAGCAATGTTAAAAATAGATCTTAACTAATTTGTCACTTACCCCTTCTTGCATTTTGAGCACCAGTTTCAGTTTTTAGGCCATTGTCATCTTCAACATTTTGATTGTTTCTCAAGTGTTCATGGAGTGGGGCATTATTGATATAGATAGTTACTTGTTTCTC

mRNA sequence

AATTCCAAAAACTGTTCGGTTCCAAGAATTATTTTAAAAACATCTGCTTTCTTCAACATTTCTATGATACTTCACATTAATATTCATCAACATCTGCAAAAAGTCCAGTCCGAATATTTCCTCGATTTCAGTTTGTTCTAGGGCTGAAAGCTTCGGTCGTTCTCTTTCGGGTAAGGAGATAACCAATGAAAGGGGAAGTACAGTTGGAATCGTCTATTGCCCAAAAACCTACTGACTCTGACCCTCTGCTTGAGAATCAGTCCGATTCATCCCATGGTGGAACCTCCGATGAAATCAGGGACGATGAGGATGCTGAAGCTGGTTCCATTCCCTGTTGTCGTATTTGCCTAGAGAGCGACGCTGAACCAGCTGGGGTAATATCTTCTTCCACTGGCTCAAATCCAATTTTCCATTTTACAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCATTAAGGCAAATTTCTTTATTTTAGTTCTTTTACTCTGTTCCTGCTTTCGACTATCAAGGATTTGTTTGTTTCCTATTCTATTTTCTTATGGTTTTAATCAATCTGATAGGATTCCCGTAATTCTGCAGGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCATCTGAAAGTTTCCTTATTTGAGGACAGCTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGGGATGTTCTCCTTGTATTTCTAGCTGTTCAAACTTTAATAGCTGCAATAGGTGGTTATGCGTATATTATGGACAAAGATGGGGCATTCAGAAATTCTTTCAGTGATGGATGGGATCGTATTCTCTCCAAACATCCTATTCCATTTTATTACTGTATTGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATACTACATTGTTCCTCCCTGAATAGTAACGATCCACGAGTTGCTGGGTGTCACAACTGTTGCTATGGCTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCCTGCTTTGCACTAGTTATTGTTTTCATCGTTATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCTACTATGGCTATTCAAAGGATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATATGTGGTGGAGGATCTACACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAGCACTTGAAAATGCTACAGCTCCTGTAATGAATGGCAGATGAGGTGTTAAATTTTCATTTTGTTTGCTATGATCTTTTGTTTGAGACGATACAATGTGCATTTGCTTGACTGCGTTGTTATAAATGAGCAATGTTAAAAATAGATCTTAACTAATTTGTCACTTACCCCTTCTTGCATTTTGAGCACCAGTTTCAGTTTTTAGGCCATTGTCATCTTCAACATTTTGATTGTTTCTCAAGTGTTCATGGAGTGGGGCATTATTGATATAGATAGTTACTTGTTTCTC

Coding sequence (CDS)

ATGAAAGGGGAAGTACAGTTGGAATCGTCTATTGCCCAAAAACCTACTGACTCTGACCCTCTGCTTGAGAATCAGTCCGATTCATCCCATGGTGGAACCTCCGATGAAATCAGGGACGATGAGGATGCTGAAGCTGGTTCCATTCCCTGTTGTCGTATTTGCCTAGAGAGCGACGCTGAACCAGCTGGGGTAATATCTTCTTCCACTGGCTCAAATCCAATTTTCCATTTTACAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCATTAAGGCAAATTTCTTTATTTTAGTTCTTTTACTCTGTTCCTGCTTTCGACTATCAAGGATTTGTTTGTTTCCTATTCTATTTTCTTATGGTTTTAATCAATCTGATAGGATTCCCGTAATTCTGCAGGAAGGGTTTGCTTTCTCGCATTGCACAACATGCAAAGCCCAATTTCATCTGAAAGTTTCCTTATTTGAGGACAGCTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGGGATGTTCTCCTTGTATTTCTAGCTGTTCAAACTTTAATAGCTGCAATAGGTGGTTATGCGTATATTATGGACAAAGATGGGGCATTCAGAAATTCTTTCAGTGATGGATGGGATCGTATTCTCTCCAAACATCCTATTCCATTTTATTACTGTATTGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATACTACATTGTTCCTCCCTGAATAGTAACGATCCACGAGTTGCTGGGTGTCACAACTGTTGCTATGGCTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCCTGCTTTGCACTAGTTATTGTTTTCATCGTTATCTTTGTAATCCTTGGCATAGCTTATGGTTTCCTTGCTGCTACTATGGCTATTCAAAGGATCTGGCAAAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAATATGTGGTGGAGGATCTACACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAGCACTTGAAAATGCTACAGCTCCTGTAA

Protein sequence

MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAEPAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSCFRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKFRLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL

Homology

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BLAST of Carg12138 vs. NCBI nr
Match: KAG7021793.1 (hypothetical protein SDJN02_15520 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 740.7 bits (1911), Expect = 5.9e-210
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60

Query: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120
           PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC
Sbjct: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120

Query: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180
           FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF
Sbjct: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360

Query: 361 LQLL 365
           LQLL
Sbjct: 361 LQLL 364

[Close]

BLAST of Carg12138 vs. NCBI nr
Match: XP_022930982.1 (uncharacterized protein LOC111437309 [Cucurbita moschata] >XP_022930991.1 uncharacterized protein LOC111437309 [Cucurbita moschata] >XP_023531724.1 uncharacterized protein LOC111793889 [Cucurbita pepo subsp. pepo] >XP_023531725.1 uncharacterized protein LOC111793889 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 595.9 bits (1535), Expect = 2.4e-166
Identity = 304/364 (83.52%), Postives = 306/364 (84.07%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60

Query: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120
           P                 EDELISPCMCKGTQQFVHRSCLDHWRSIK             
Sbjct: 61  P-----------------EDELISPCMCKGTQQFVHRSCLDHWRSIK------------- 120

Query: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180
                                       EGFAFSHCTTCKAQFHLKVSLFED+SWRKVKF
Sbjct: 121 ----------------------------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 306

Query: 361 LQLL 365
           LQLL
Sbjct: 361 LQLL 306

[Close]

BLAST of Carg12138 vs. NCBI nr
Match: XP_022965057.1 (uncharacterized protein LOC111465033 [Cucurbita maxima] >XP_022965065.1 uncharacterized protein LOC111465033 [Cucurbita maxima])

HSP 1 Score: 593.6 bits (1529), Expect = 1.2e-165
Identity = 302/364 (82.97%), Postives = 306/364 (84.07%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60

Query: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120
           P                 EDELISPCMCKGTQQFVHRSCLDHWRSIK             
Sbjct: 61  P-----------------EDELISPCMCKGTQQFVHRSCLDHWRSIK------------- 120

Query: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180
                                       EGFAFSHCTTCK+QFHLKVSLFED+SWRKVKF
Sbjct: 121 ----------------------------EGFAFSHCTTCKSQFHLKVSLFEDNSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVFLAVQTLIAA+GGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 306

Query: 361 LQLL 365
           LQLL
Sbjct: 361 LQLL 306

[Close]

BLAST of Carg12138 vs. NCBI nr
Match: KAA0046730.1 (Zinc finger, RING-CH-type [Cucumis melo var. makuwa])

HSP 1 Score: 584.7 bits (1506), Expect = 5.4e-163
Identity = 299/364 (82.14%), Postives = 306/364 (84.07%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSI Q P+DSDPLLENQ+DSS  GTSDEI+ DED EAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIK-DEDTEAGSIPCCRICLESDAE 60

Query: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120
           P                 EDELISPCMCKGTQQFVHRSCLDHWRS+KANFFIL       
Sbjct: 61  P-----------------EDELISPCMCKGTQQFVHRSCLDHWRSVKANFFIL------- 120

Query: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180
                                       EGFAFSHCTTCKAQFHLKVSLFED+SWRKVKF
Sbjct: 121 ----------------------------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVF+AVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKM 311

Query: 361 LQLL 365
           LQLL
Sbjct: 361 LQLL 311

[Close]

BLAST of Carg12138 vs. NCBI nr
Match: XP_008464996.1 (PREDICTED: uncharacterized protein LOC103502724 [Cucumis melo] >XP_008464997.1 PREDICTED: uncharacterized protein LOC103502724 [Cucumis melo] >TYK14507.1 Zinc finger, RING-CH-type [Cucumis melo var. makuwa])

HSP 1 Score: 571.6 bits (1472), Expect = 4.8e-159
Identity = 293/364 (80.49%), Postives = 300/364 (82.42%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSI Q P+DSDPLLENQ+DSS  GTSDEI+ DED EAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIK-DEDTEAGSIPCCRICLESDAE 60

Query: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120
           P                 EDELISPCMCKGTQQFVHRSCLDHWRS+K             
Sbjct: 61  P-----------------EDELISPCMCKGTQQFVHRSCLDHWRSVK------------- 120

Query: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180
                                       EGFAFSHCTTCKAQFHLKVSLFED+SWRKVKF
Sbjct: 121 ----------------------------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVF+AVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKM 305

Query: 361 LQLL 365
           LQLL
Sbjct: 361 LQLL 305

[Close]

BLAST of Carg12138 vs. ExPASy Swiss-Prot
Match: Q0IH10 (E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus laevis OX=8355 GN=marchf3 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04
Identity = 22/57 (38.60%), Postives = 28/57 (49.12%), Query Frame = 0


Query: 49  PCCRICLESDAEPAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRS 106
           P CRIC E                     T+++L+SPC C GT   +HRSCL+HW S
Sbjct: 68  PMCRICHEGS-------------------TQEDLLSPCECTGTLGTIHRSCLEHWLS 105

[Close]

BLAST of Carg12138 vs. ExPASy Swiss-Prot
Match: Q68FA7 (E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus tropicalis OX=8364 GN=marchf3 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04
Identity = 22/57 (38.60%), Postives = 28/57 (49.12%), Query Frame = 0


Query: 49  PCCRICLESDAEPAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRS 106
           P CRIC E                     T+++L+SPC C GT   +HRSCL+HW S
Sbjct: 67  PMCRICHEGS-------------------TQEDLLSPCECTGTLGTIHRSCLEHWLS 104

[Close]

BLAST of Carg12138 vs. ExPASy Swiss-Prot
Match: A0JN69 (E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN=MARCHF3 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.0e-04
Identity = 21/57 (36.84%), Postives = 28/57 (49.12%), Query Frame = 0


Query: 49  PCCRICLESDAEPAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRS 106
           P CRIC E                     ++++L+SPC C GT   +HRSCL+HW S
Sbjct: 69  PMCRICHEGS-------------------SQEDLLSPCECTGTLGTIHRSCLEHWLS 106

[Close]

BLAST of Carg12138 vs. ExPASy Swiss-Prot
Match: Q86UD3 (E3 ubiquitin-protein ligase MARCHF3 OS=Homo sapiens OX=9606 GN=MARCHF3 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.0e-04
Identity = 21/57 (36.84%), Postives = 28/57 (49.12%), Query Frame = 0


Query: 49  PCCRICLESDAEPAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRS 106
           P CRIC E                     ++++L+SPC C GT   +HRSCL+HW S
Sbjct: 69  PMCRICHEGS-------------------SQEDLLSPCECTGTLGTIHRSCLEHWLS 106

[Close]

BLAST of Carg12138 vs. ExPASy Swiss-Prot
Match: Q8BRX9 (E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.0e-04
Identity = 21/57 (36.84%), Postives = 28/57 (49.12%), Query Frame = 0


Query: 49  PCCRICLESDAEPAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRS 106
           P CRIC E                     ++++L+SPC C GT   +HRSCL+HW S
Sbjct: 69  PMCRICHEGS-------------------SQEDLLSPCECTGTLGTIHRSCLEHWLS 106

[Close]

BLAST of Carg12138 vs. ExPASy TrEMBL
Match: A0A6J1ESG3 (uncharacterized protein LOC111437309 OS=Cucurbita moschata OX=3662 GN=LOC111437309 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 1.1e-166
Identity = 304/364 (83.52%), Postives = 306/364 (84.07%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60

Query: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120
           P                 EDELISPCMCKGTQQFVHRSCLDHWRSIK             
Sbjct: 61  P-----------------EDELISPCMCKGTQQFVHRSCLDHWRSIK------------- 120

Query: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180
                                       EGFAFSHCTTCKAQFHLKVSLFED+SWRKVKF
Sbjct: 121 ----------------------------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 306

Query: 361 LQLL 365
           LQLL
Sbjct: 361 LQLL 306

[Close]

BLAST of Carg12138 vs. ExPASy TrEMBL
Match: A0A6J1HJB0 (uncharacterized protein LOC111465033 OS=Cucurbita maxima OX=3661 GN=LOC111465033 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 5.7e-166
Identity = 302/364 (82.97%), Postives = 306/364 (84.07%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60

Query: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120
           P                 EDELISPCMCKGTQQFVHRSCLDHWRSIK             
Sbjct: 61  P-----------------EDELISPCMCKGTQQFVHRSCLDHWRSIK------------- 120

Query: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180
                                       EGFAFSHCTTCK+QFHLKVSLFED+SWRKVKF
Sbjct: 121 ----------------------------EGFAFSHCTTCKSQFHLKVSLFEDNSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVFLAVQTLIAA+GGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 306

Query: 361 LQLL 365
           LQLL
Sbjct: 361 LQLL 306

[Close]

BLAST of Carg12138 vs. ExPASy TrEMBL
Match: A0A5A7TUB8 (Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00100 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 2.6e-163
Identity = 299/364 (82.14%), Postives = 306/364 (84.07%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSI Q P+DSDPLLENQ+DSS  GTSDEI+ DED EAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIK-DEDTEAGSIPCCRICLESDAE 60

Query: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120
           P                 EDELISPCMCKGTQQFVHRSCLDHWRS+KANFFIL       
Sbjct: 61  P-----------------EDELISPCMCKGTQQFVHRSCLDHWRSVKANFFIL------- 120

Query: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180
                                       EGFAFSHCTTCKAQFHLKVSLFED+SWRKVKF
Sbjct: 121 ----------------------------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVF+AVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKM 311

Query: 361 LQLL 365
           LQLL
Sbjct: 361 LQLL 311

[Close]

BLAST of Carg12138 vs. ExPASy TrEMBL
Match: A0A1S3CMV4 (uncharacterized protein LOC103502724 OS=Cucumis melo OX=3656 GN=LOC103502724 PE=4 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 2.3e-159
Identity = 293/364 (80.49%), Postives = 300/364 (82.42%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSI Q P+DSDPLLENQ+DSS  GTSDEI+ DED EAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIK-DEDTEAGSIPCCRICLESDAE 60

Query: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120
           P                 EDELISPCMCKGTQQFVHRSCLDHWRS+K             
Sbjct: 61  P-----------------EDELISPCMCKGTQQFVHRSCLDHWRSVK------------- 120

Query: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180
                                       EGFAFSHCTTCKAQFHLKVSLFED+SWRKVKF
Sbjct: 121 ----------------------------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVF+AVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKM 305

Query: 361 LQLL 365
           LQLL
Sbjct: 361 LQLL 305

[Close]

BLAST of Carg12138 vs. ExPASy TrEMBL
Match: A0A5D3CRE4 (Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00210 PE=4 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 2.3e-159
Identity = 293/364 (80.49%), Postives = 300/364 (82.42%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAE 60
           MKGEVQLESSI Q P+DSDPLLENQ+DSS  GTSDEI+ DED EAGSIPCCRICLESDAE
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIK-DEDTEAGSIPCCRICLESDAE 60

Query: 61  PAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSC 120
           P                 EDELISPCMCKGTQQFVHRSCLDHWRS+K             
Sbjct: 61  P-----------------EDELISPCMCKGTQQFVHRSCLDHWRSVK------------- 120

Query: 121 FRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKF 180
                                       EGFAFSHCTTCKAQFHLKVSLFED+SWRKVKF
Sbjct: 121 ----------------------------EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKF 180

Query: 181 RLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240
           RLFVARDVLLVF+AVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV
Sbjct: 181 RLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGV 240

Query: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300
           LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF
Sbjct: 241 LAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVIF 300

Query: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKM 360
           VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLKM
Sbjct: 301 VILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLKM 305

Query: 361 LQLL 365
           LQLL
Sbjct: 361 LQLL 305

[Close]

BLAST of Carg12138 vs. TAIR 10
Match: AT1G11020.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 465.7 bits (1197), Expect = 3.4e-131
Identity = 245/377 (64.99%), Postives = 274/377 (72.68%), Query Frame = 0


Query: 1   MKGEVQLESSIAQKPTDSDPLLENQSDSSH---------GGTSDEIRDDEDAE--AGSIP 60
           M+GEVQL+   +QK +DS PLL + ++SS           G SDEI+ +ED E  A S P
Sbjct: 2   MQGEVQLQPPDSQKLSDSAPLLGDHTNSSSASPSAASVVAGNSDEIKAEEDLENDASSAP 61

Query: 61  CCRICLESDAEPAGVISSSTGSNPIFHFTEDELISPCMCKGTQQFVHRSCLDHWRSIKAN 120
           CCRICLE D+E  G                DELISPCMCKGTQQFVHRSCLDHWRS+K  
Sbjct: 62  CCRICLEDDSELLG----------------DELISPCMCKGTQQFVHRSCLDHWRSVK-- 121

Query: 121 FFILVLLLCSCFRLSRICLFPILFSYGFNQSDRIPVILQEGFAFSHCTTCKAQFHLKVSL 180
                                                  EGFAFSHCTTCKAQFHL+V  
Sbjct: 122 ---------------------------------------EGFAFSHCTTCKAQFHLRVEP 181

Query: 181 FED-SSW-RKVKFRLFVARDVLLVFLAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRIL 240
           FED +SW RK KFRLFVARDVLLVFLAVQT+IA + G+AY+MDKDG FRNSF+D WDRIL
Sbjct: 182 FEDNNSWRRKAKFRLFVARDVLLVFLAVQTVIAVMAGFAYMMDKDGEFRNSFNDDWDRIL 241

Query: 241 SKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASME 300
           SKHPIPFYYCIGV++FFVL GF G+ILHCS+LN NDPR+AGC NCCYGWG+LDCFPASME
Sbjct: 242 SKHPIPFYYCIGVISFFVLTGFLGIILHCSALNGNDPRMAGCQNCCYGWGVLDCFPASME 301

Query: 301 ACFALVIVFIVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTP 360
           ACFALV+VF+VIF ILG+AYGFLAATMAIQRIWQRHYHILTKRELTKEY+VEDLHG YTP
Sbjct: 302 ACFALVVVFVVIFAILGLAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGSYTP 321

Query: 361 PKLDPEHEQHLKMLQLL 365
           PKLD EHE  LKML+LL
Sbjct: 362 PKLDAEHEGRLKMLKLL 321

[Close]

BLAST of Carg12138 vs. TAIR 10
Match: AT2G22120.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 187.6 bits (475), Expect = 1.8e-47
Identity = 135/390 (34.62%), Postives = 170/390 (43.59%), Query Frame = 0


Query: 20  PLLE-NQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAEPAGVISSSTGSNPIFHFT 79
           P++E ++ D   GG  ++I+            CRICLE+D                    
Sbjct: 15  PMVEPSEIDLEAGGPGEQIQ------------CRICLETDGR------------------ 74

Query: 80  EDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSCFRLSRICLFPILFSYGFN 139
             + I+PC CKGT ++VHR CLDHWR+IK                               
Sbjct: 75  --DFIAPCKCKGTSKYVHRDCLDHWRAIK------------------------------- 134

Query: 140 QSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKFRLFVARDVLLVFLAVQTL 199
                     EGFAF+HCTTCKA ++L+V    D  WR +KFR FV RD+L +FLAVQ +
Sbjct: 135 ----------EGFAFAHCTTCKAPYYLRVHSAGDRKWRTLKFRFFVTRDILSIFLAVQLV 194

Query: 200 IAAIGGYAYIMDKDGAFRNSFSDGWDRIL--SKHPIPFYYCIGVLAFFVLLGFFGLILHC 259
           IAA+    Y +D       S+   W R +      + FYY  G L FF LLG  G ++ C
Sbjct: 195 IAALAYMVYFID-------SYQQSWLRHIWGFDSEVTFYYMCGALLFFALLGLSGCVITC 254

Query: 260 SSLNSNDPRVAGCHN---CCYGWGILD--------CFPASMEAC---------------- 319
                 +     C     CC   GI          C  A   AC                
Sbjct: 255 YDRRVRNDLAQPCRELCLCCCQPGICTDCHLPGTICMWADCTACTEGCASAVSECGGCLG 314

Query: 320 ----------FALVIVFIVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVE 365
                     F   +V + +F ++GI Y  L ATM  QRIWQRHYHIL KR LTKEYVVE
Sbjct: 315 GAGEAGLPLLFITALVILGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVE 324

[Close]

BLAST of Carg12138 vs. TAIR 10
Match: AT2G22120.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 187.6 bits (475), Expect = 1.8e-47
Identity = 135/390 (34.62%), Postives = 170/390 (43.59%), Query Frame = 0


Query: 20  PLLE-NQSDSSHGGTSDEIRDDEDAEAGSIPCCRICLESDAEPAGVISSSTGSNPIFHFT 79
           P++E ++ D   GG  ++I+            CRICLE+D                    
Sbjct: 15  PMVEPSEIDLEAGGPGEQIQ------------CRICLETDGR------------------ 74

Query: 80  EDELISPCMCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSCFRLSRICLFPILFSYGFN 139
             + I+PC CKGT ++VHR CLDHWR+IK                               
Sbjct: 75  --DFIAPCKCKGTSKYVHRDCLDHWRAIK------------------------------- 134

Query: 140 QSDRIPVILQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKFRLFVARDVLLVFLAVQTL 199
                     EGFAF+HCTTCKA ++L+V    D  WR +KFR FV RD+L +FLAVQ +
Sbjct: 135 ----------EGFAFAHCTTCKAPYYLRVHSAGDRKWRTLKFRFFVTRDILSIFLAVQLV 194

Query: 200 IAAIGGYAYIMDKDGAFRNSFSDGWDRIL--SKHPIPFYYCIGVLAFFVLLGFFGLILHC 259
           IAA+    Y +D       S+   W R +      + FYY  G L FF LLG  G ++ C
Sbjct: 195 IAALAYMVYFID-------SYQQSWLRHIWGFDSEVTFYYMCGALLFFALLGLSGCVITC 254

Query: 260 SSLNSNDPRVAGCHN---CCYGWGILD--------CFPASMEAC---------------- 319
                 +     C     CC   GI          C  A   AC                
Sbjct: 255 YDRRVRNDLAQPCRELCLCCCQPGICTDCHLPGTICMWADCTACTEGCASAVSECGGCLG 314

Query: 320 ----------FALVIVFIVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVE 365
                     F   +V + +F ++GI Y  L ATM  QRIWQRHYHIL KR LTKEYVVE
Sbjct: 315 GAGEAGLPLLFITALVILGLFTVIGIFYSVLVATMVGQRIWQRHYHILAKRMLTKEYVVE 324

[Close]

BLAST of Carg12138 vs. TAIR 10
Match: AT1G50440.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 129.0 bits (323), Expect = 7.6e-30
Identity = 102/337 (30.27%), Postives = 137/337 (40.65%), Query Frame = 0


Query: 32  GTSDEIRDDEDAE-----AGSIPCCRICLESDAEPAGVISSSTGSNPIFHFTEDELISPC 91
           G   EI + +D E     +G  P CRICL+   E                    +LI+PC
Sbjct: 40  GQVSEIAETDDDETTLLVSGDQPQCRICLDVGGE--------------------DLIAPC 99

Query: 92  MCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSCFRLSRICLFPILFSYGFNQSDRIPVI 151
            CKGTQ+ VHRSCLD+WRS K                                       
Sbjct: 100 NCKGTQKHVHRSCLDNWRSTK--------------------------------------- 159

Query: 152 LQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKFRLFVARDVLLVFLAVQTLIAAIGGYA 211
             EGFAFSHCT C+A F L+ ++  D  W +++F+L VARD   +F++VQ ++A +G   
Sbjct: 160 --EGFAFSHCTECRAFFKLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLV 219

Query: 212 YIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRV 271
           Y    +   R  F         +HP  F Y + VLA                        
Sbjct: 220 YKFYGE-ELREMFG------YEEHPYGF-YTLAVLA------------------------ 249

Query: 272 AGCHNCCYGWGILDCFPASMEACFALVIVFIVIFVILGIAYGFLAATMAIQRIWQRHYHI 331
                                             V++G+ YGF  A +  Q+I +RHYH+
Sbjct: 280 ---------------------------------IVLVGLLYGFFIAIICGQKINERHYHV 249

Query: 332 LTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQL 364
           L K+ELTKEY+VED   C   P+LD  H   LKML L
Sbjct: 340 LAKQELTKEYIVED-RDCKNVPELDQSHVMELKMLGL 249

[Close]

BLAST of Carg12138 vs. TAIR 10
Match: AT1G50440.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 129.0 bits (323), Expect = 7.6e-30
Identity = 102/337 (30.27%), Postives = 137/337 (40.65%), Query Frame = 0


Query: 32  GTSDEIRDDEDAE-----AGSIPCCRICLESDAEPAGVISSSTGSNPIFHFTEDELISPC 91
           G   EI + +D E     +G  P CRICL+   E                    +LI+PC
Sbjct: 40  GQVSEIAETDDDETTLLVSGDQPQCRICLDVGGE--------------------DLIAPC 99

Query: 92  MCKGTQQFVHRSCLDHWRSIKANFFILVLLLCSCFRLSRICLFPILFSYGFNQSDRIPVI 151
            CKGTQ+ VHRSCLD+WRS K                                       
Sbjct: 100 NCKGTQKHVHRSCLDNWRSTK--------------------------------------- 159

Query: 152 LQEGFAFSHCTTCKAQFHLKVSLFEDSSWRKVKFRLFVARDVLLVFLAVQTLIAAIGGYA 211
             EGFAFSHCT C+A F L+ ++  D  W +++F+L VARD   +F++VQ ++A +G   
Sbjct: 160 --EGFAFSHCTECRAFFKLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLV 219

Query: 212 YIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRV 271
           Y    +   R  F         +HP  F Y + VLA                        
Sbjct: 220 YKFYGE-ELREMFG------YEEHPYGF-YTLAVLA------------------------ 249

Query: 272 AGCHNCCYGWGILDCFPASMEACFALVIVFIVIFVILGIAYGFLAATMAIQRIWQRHYHI 331
                                             V++G+ YGF  A +  Q+I +RHYH+
Sbjct: 280 ---------------------------------IVLVGLLYGFFIAIICGQKINERHYHV 249

Query: 332 LTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQL 364
           L K+ELTKEY+VED   C   P+LD  H   LKML L
Sbjct: 340 LAKQELTKEYIVED-RDCKNVPELDQSHVMELKMLGL 249

The following BLAST results are available for this feature:

BLAST of Carg12138 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021793.1	5.9e-210	100.00	hypothetical protein SDJN02_15520 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022930982.1	2.4e-166	83.52	uncharacterized protein LOC111437309 [Cucurbita moschata] >XP_022930991.1 unchar...	[more]
XP_022965057.1	1.2e-165	82.97	uncharacterized protein LOC111465033 [Cucurbita maxima] >XP_022965065.1 uncharac...	[more]
KAA0046730.1	5.4e-163	82.14	Zinc finger, RING-CH-type [Cucumis melo var. makuwa]	[more]
XP_008464996.1	4.8e-159	80.49	PREDICTED: uncharacterized protein LOC103502724 [Cucumis melo] >XP_008464997.1 P...	[more]

BLAST of Carg12138 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0IH10	2.4e-04	38.60	E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus laevis OX=8355 GN=marchf3 PE=2 SV...	[more]
Q68FA7	2.4e-04	38.60	E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus tropicalis OX=8364 GN=marchf3 PE=...	[more]
A0JN69	7.0e-04	36.84	E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN=MARCHF3 PE=2 SV=1	[more]
Q86UD3	7.0e-04	36.84	E3 ubiquitin-protein ligase MARCHF3 OS=Homo sapiens OX=9606 GN=MARCHF3 PE=1 SV=1	[more]
Q8BRX9	7.0e-04	36.84	E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=...	[more]

BLAST of Carg12138 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESG3	1.1e-166	83.52	uncharacterized protein LOC111437309 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1HJB0	5.7e-166	82.97	uncharacterized protein LOC111465033 OS=Cucurbita maxima OX=3661 GN=LOC111465033...	[more]
A0A5A7TUB8	2.6e-163	82.14	Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3CMV4	2.3e-159	80.49	uncharacterized protein LOC103502724 OS=Cucumis melo OX=3656 GN=LOC103502724 PE=...	[more]
A0A5D3CRE4	2.3e-159	80.49	Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Carg12138 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11020.1	3.4e-131	64.99	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G22120.1	1.8e-47	34.62	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G22120.2	1.8e-47	34.62	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G50440.1	7.6e-30	30.27	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G50440.2	7.6e-30	30.27	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 50..110 e-value: 9.1E-7 score: 38.5
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 51..106 e-value: 4.6E-10 score: 39.5
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 43..134 score: 15.854198
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 35..174 e-value: 1.6E-16 score: 61.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR46347	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 1..110
None	No IPR available	PANTHER	PTHR46347:SF4	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 147..364 coord: 1..110
None	No IPR available	PANTHER	PTHR46347	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 147..364
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 51..110 e-value: 9.76837E-14 score: 63.1152
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 50..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12138-RA	Carg12138-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding