Carg12125 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg12125
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	Carg_Chr11: 2354001 .. 2355082 (-)
RNA-Seq Expression	Carg12125
Synteny	Carg12125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTGAGAAGCGCTTCGACTCCTCTCTTCAATTCATGGTTACACCATTCAAGAGATTCATACCTGGAGCACGAGATCGTGAACCAAATCCCGAGGGCGCGTTCCATTGTTCTCTGTTGCTCACCCGGTTGCACATCTCCGATAATCGATGACTCACCCAGGAAGATTACTCGGGCGTTGTCCGAGACGGATCTTCGGGACATGTCCATGAATAAGATGAAGCCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGGTTGACGAAGAGAGAGATGTAATCGGGTTTAGCCGCTCCAACACGGCGTCGTTGAGGCGTGAATCGATTTCTGAAACTGGGGATAGGGATGGTGGGTTTGTTAATGTTCTGGTTGGTGGTGGAGTTGGTGGTAGTGGTGGAAGGATCAGTGGCGGCGGAGGATCCGACGGTGGCGACGATGGGAGTTTCGGGATTGGAGATTCGAATCATGGAAATGACAATACGGATCTGCACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCACGGTTCTTGAAAGAGGTATATCCAATTGCTATATCATAGAAGAAAAAATCTTATCCAATTTCGAACATTACTGGTTTCTGGTATTTACAATGATCTTTACGGGTAATAGGTACGTGGGGATCTTGTAAAAGCTCAAGAATATTGTGGAAGGGCGATTCTGAGCAATCCAGGCGATGGTAATGTCTTGTCTATGTACGCCGATATGATATGGGAAACTCAAAAGGACACTCCAAGAGCCGAGAGTTACTTCAATCAAGCCGTTCAAGCTGCCCCTGATGACTGGTAAGCTTGTAGATTATTTGATGATGAGCTTCACACTTTTTCATGAGAGTTATGGTTGTTTAATGTCATATTGATTGCTCTTATGGTGCAGTTATGTTCTAGCATCATATGCACGGTTTCTTTGGGATGCTGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGCTTAATCGAAAAGCCAGCAACAAGCTTCTTTCAAGGAGTTCATACCCCACCTCCTCTTGCTGCCGCATCTTAA

mRNA sequence

ATGATTCTGAGAAGCGCTTCGACTCCTCTCTTCAATTCATGGTTACACCATTCAAGAGATTCATACCTGGAGCACGAGATCGTGAACCAAATCCCGAGGGCGCGTTCCATTGTTCTCTGTTGCTCACCCGGTTGCACATCTCCGATAATCGATGACTCACCCAGGAAGATTACTCGGGCGTTGTCCGAGACGGATCTTCGGGACATGTCCATGAATAAGATGAAGCCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGGTTGACGAAGAGAGAGATGTAATCGGGTTTAGCCGCTCCAACACGGCGTCGTTGAGGCGTGAATCGATTTCTGAAACTGGGGATAGGGATGGTGGGTTTGTTAATGTTCTGGTTGGTGGTGGAGTTGGTGGTAGTGGTGGAAGGATCAGTGGCGGCGGAGGATCCGACGGTGGCGACGATGGGAGTTTCGGGATTGGAGATTCGAATCATGGAAATGACAATACGGATCTGCACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCACGGTTCTTGAAAGAGGTACGTGGGGATCTTGTAAAAGCTCAAGAATATTGTGGAAGGGCGATTCTGAGCAATCCAGGCGATGGTAATGTCTTGTCTATGTACGCCGATATGATATGGGAAACTCAAAAGGACACTCCAAGAGCCGAGAGTTACTTCAATCAAGCCGTTCAAGCTGCCCCTGATGACTGTTATGTTCTAGCATCATATGCACGGTTTCTTTGGGATGCTGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGCTTAATCGAAAAGCCAGCAACAAGCTTCTTTCAAGGAGTTCATACCCCACCTCCTCTTGCTGCCGCATCTTAA

Coding sequence (CDS)

ATGATTCTGAGAAGCGCTTCGACTCCTCTCTTCAATTCATGGTTACACCATTCAAGAGATTCATACCTGGAGCACGAGATCGTGAACCAAATCCCGAGGGCGCGTTCCATTGTTCTCTGTTGCTCACCCGGTTGCACATCTCCGATAATCGATGACTCACCCAGGAAGATTACTCGGGCGTTGTCCGAGACGGATCTTCGGGACATGTCCATGAATAAGATGAAGCCCTTTAGCAGAACTCTGAGTGGGTTTTCTGAGGTTGACGAAGAGAGAGATGTAATCGGGTTTAGCCGCTCCAACACGGCGTCGTTGAGGCGTGAATCGATTTCTGAAACTGGGGATAGGGATGGTGGGTTTGTTAATGTTCTGGTTGGTGGTGGAGTTGGTGGTAGTGGTGGAAGGATCAGTGGCGGCGGAGGATCCGACGGTGGCGACGATGGGAGTTTCGGGATTGGAGATTCGAATCATGGAAATGACAATACGGATCTGCACTATCAGAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCACGGTTCTTGAAAGAGGTACGTGGGGATCTTGTAAAAGCTCAAGAATATTGTGGAAGGGCGATTCTGAGCAATCCAGGCGATGGTAATGTCTTGTCTATGTACGCCGATATGATATGGGAAACTCAAAAGGACACTCCAAGAGCCGAGAGTTACTTCAATCAAGCCGTTCAAGCTGCCCCTGATGACTGTTATGTTCTAGCATCATATGCACGGTTTCTTTGGGATGCTGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGCTTAATCGAAAAGCCAGCAACAAGCTTCTTTCAAGGAGTTCATACCCCACCTCCTCTTGCTGCCGCATCTTAA

Protein sequence

MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRALSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFVNVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQAAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS

Homology

[Close]

BLAST of Carg12125 vs. NCBI nr
Match: KAG7021780.1 (hypothetical protein SDJN02_15507, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 581.6 bits (1498), Expect = 3.8e-162
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60
           MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA
Sbjct: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60

Query: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120
           LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV
Sbjct: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120

Query: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180
           NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS
Sbjct: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240

Query: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 299
           AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS
Sbjct: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 298

[Close]

BLAST of Carg12125 vs. NCBI nr
Match: KAG6587895.1 (hypothetical protein SDJN03_16460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 573.5 bits (1477), Expect = 1.0e-159
Identity = 294/298 (98.66%), Postives = 295/298 (98.99%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60
           MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSP CTSPIIDDSPRKITRA
Sbjct: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPSCTSPIIDDSPRKITRA 60

Query: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120
           LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFS SNTASLRRESISETGDRDGGFV
Sbjct: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSCSNTASLRRESISETGDRDGGFV 120

Query: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180
           NVLVGGGVGGSGGRI GGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS
Sbjct: 121 NVLVGGGVGGSGGRIGGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYAD+IWETQKDTPRAESYFNQAVQ
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDTPRAESYFNQAVQ 240

Query: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 299
           AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS
Sbjct: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 298

[Close]

BLAST of Carg12125 vs. NCBI nr
Match: XP_022929735.1 (uncharacterized protein LOC111436230 [Cucurbita moschata])

HSP 1 Score: 562.8 bits (1449), Expect = 1.8e-156
Identity = 291/298 (97.65%), Postives = 292/298 (97.99%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60
           MILRSASTPLFNSWLHHSRDSYLE EIVNQIPRARSIVLCCSP CTSPIIDDSPRKITRA
Sbjct: 1   MILRSASTPLFNSWLHHSRDSYLEPEIVNQIPRARSIVLCCSPSCTSPIIDDSPRKITRA 60

Query: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120
           LSETDLRDMSMNKMKPFSRTLSGFSEVDEE DVIGFSRSNTASLRRESISETGDRDGGFV
Sbjct: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEETDVIGFSRSNTASLRRESISETGDRDGGFV 120

Query: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180
           NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLL 
Sbjct: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLG 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYAD+IWETQKDTPRAESYFNQAVQ
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDTPRAESYFNQAVQ 240

Query: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 299
           AAPDDCYVLASYARFLWDAEED  EEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS
Sbjct: 241 AAPDDCYVLASYARFLWDAEED--EEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 296

[Close]

BLAST of Carg12125 vs. NCBI nr
Match: XP_023529549.1 (uncharacterized protein LOC111792370 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556.2 bits (1432), Expect = 1.7e-154
Identity = 287/298 (96.31%), Postives = 289/298 (96.98%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60
           MILRSASTPLFNSWLHHSRDSYLE EIVNQIPRARSIVLCCSP CTSPIIDDSPRKITRA
Sbjct: 1   MILRSASTPLFNSWLHHSRDSYLEPEIVNQIPRARSIVLCCSPSCTSPIIDDSPRKITRA 60

Query: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120
           LSETDLRDMSMNKMKPF+RTLSGFSEVDEERDVIGFSRS TASLRRESISETGDRDGGFV
Sbjct: 61  LSETDLRDMSMNKMKPFNRTLSGFSEVDEERDVIGFSRSKTASLRRESISETGDRDGGFV 120

Query: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180
           NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS
Sbjct: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYAD+IWETQKDTPRAESYFNQAVQ
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDTPRAESYFNQAVQ 240

Query: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 299
           AAPDDCYVLASYARFLWDAEED      EEEEEDGLIEKPATSFFQGVHTPPPLAAAS
Sbjct: 241 AAPDDCYVLASYARFLWDAEED------EEEEEDGLIEKPATSFFQGVHTPPPLAAAS 292

[Close]

BLAST of Carg12125 vs. NCBI nr
Match: XP_022971924.1 (uncharacterized protein LOC111470595 [Cucurbita maxima])

HSP 1 Score: 552.0 bits (1421), Expect = 3.2e-153
Identity = 285/298 (95.64%), Postives = 287/298 (96.31%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60
           MILRSASTPLFNSWLHHSRDSYLE EIVNQIPRARSIVLCCSP CTSPIIDDSPRKITRA
Sbjct: 1   MILRSASTPLFNSWLHHSRDSYLEPEIVNQIPRARSIVLCCSPSCTSPIIDDSPRKITRA 60

Query: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120
           LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRS TASLRRESISETGDRDGGFV
Sbjct: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSKTASLRRESISETGDRDGGFV 120

Query: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180
           NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS
Sbjct: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYAD+IWETQKDTPRAESYFNQAVQ
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDTPRAESYFNQAVQ 240

Query: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 299
           AAP+DCYVLASYARFLWDAEED        EEEDGLIEKPATSFFQGVHTPPPLAAAS
Sbjct: 241 AAPNDCYVLASYARFLWDAEED--------EEEDGLIEKPATSFFQGVHTPPPLAAAS 290

[Close]

BLAST of Carg12125 vs. ExPASy TrEMBL
Match: A0A6J1EV56 (uncharacterized protein LOC111436230 OS=Cucurbita moschata OX=3662 GN=LOC111436230 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 8.8e-157
Identity = 291/298 (97.65%), Postives = 292/298 (97.99%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60
           MILRSASTPLFNSWLHHSRDSYLE EIVNQIPRARSIVLCCSP CTSPIIDDSPRKITRA
Sbjct: 1   MILRSASTPLFNSWLHHSRDSYLEPEIVNQIPRARSIVLCCSPSCTSPIIDDSPRKITRA 60

Query: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120
           LSETDLRDMSMNKMKPFSRTLSGFSEVDEE DVIGFSRSNTASLRRESISETGDRDGGFV
Sbjct: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEETDVIGFSRSNTASLRRESISETGDRDGGFV 120

Query: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180
           NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLL 
Sbjct: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLG 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYAD+IWETQKDTPRAESYFNQAVQ
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDTPRAESYFNQAVQ 240

Query: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 299
           AAPDDCYVLASYARFLWDAEED  EEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS
Sbjct: 241 AAPDDCYVLASYARFLWDAEED--EEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 296

[Close]

BLAST of Carg12125 vs. ExPASy TrEMBL
Match: A0A6J1I9Z1 (uncharacterized protein LOC111470595 OS=Cucurbita maxima OX=3661 GN=LOC111470595 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 1.5e-153
Identity = 285/298 (95.64%), Postives = 287/298 (96.31%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60
           MILRSASTPLFNSWLHHSRDSYLE EIVNQIPRARSIVLCCSP CTSPIIDDSPRKITRA
Sbjct: 1   MILRSASTPLFNSWLHHSRDSYLEPEIVNQIPRARSIVLCCSPSCTSPIIDDSPRKITRA 60

Query: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120
           LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRS TASLRRESISETGDRDGGFV
Sbjct: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSKTASLRRESISETGDRDGGFV 120

Query: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180
           NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS
Sbjct: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYAD+IWETQKDTPRAESYFNQAVQ
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDTPRAESYFNQAVQ 240

Query: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 299
           AAP+DCYVLASYARFLWDAEED        EEEDGLIEKPATSFFQGVHTPPPLAAAS
Sbjct: 241 AAPNDCYVLASYARFLWDAEED--------EEEDGLIEKPATSFFQGVHTPPPLAAAS 290

[Close]

BLAST of Carg12125 vs. ExPASy TrEMBL
Match: A0A5A7U9I5 (Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001190 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 9.4e-127
Identity = 247/300 (82.33%), Postives = 269/300 (89.67%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60
           MILRSASTPL NSWLHHSRDS LE EIV QIP++RSI+L  SP C SPIIDD PR+ITR 
Sbjct: 1   MILRSASTPLLNSWLHHSRDSSLEPEIVYQIPKSRSILLSGSPSCLSPIIDDYPRRITRT 60

Query: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120
           LSETDL+D+SM KMKPFSRTLSGFSE+ EE   +GFS S TASL   SISETG+ DGGFV
Sbjct: 61  LSETDLQDLSMAKMKPFSRTLSGFSEMAEETHGVGFSCSKTASLSCGSISETGE-DGGFV 120

Query: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180
           +VLVGGGVGGSGGRI GGGGSDGGDD SFG GDSNHGN++TDL+YQKMIEANPGNSMLLS
Sbjct: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDWSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240
           NYARFLKEVRGDLVKAQEYCGRAIL+NP DGNVLSMYAD+IWETQKD+PRAESYFNQAV+
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILNNPEDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240

Query: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEE--EDGLIEKPATSFFQGVHTPPPLAAAS 299
           AAP+DCYVLASYARFLWDA+E+EEEEEEEEEE  E+   EKPATSFFQGV +PPPLAAAS
Sbjct: 241 AAPEDCYVLASYARFLWDADEEEEEEEEEEEEVGEENFREKPATSFFQGVQSPPPLAAAS 299

[Close]

BLAST of Carg12125 vs. ExPASy TrEMBL
Match: A0A1S3BA31 (uncharacterized protein LOC103487441 OS=Cucumis melo OX=3656 GN=LOC103487441 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 9.4e-127
Identity = 247/300 (82.33%), Postives = 269/300 (89.67%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60
           MILRSASTPL NSWLHHSRDS LE EIV QIP++RSI+L  SP C SPIIDD PR+ITR 
Sbjct: 1   MILRSASTPLLNSWLHHSRDSSLEPEIVYQIPKSRSILLSGSPSCLSPIIDDYPRRITRT 60

Query: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120
           LSETDL+D+SM KMKPFSRTLSGFSE+ EE   +GFS S TASL   SISETG+ DGGFV
Sbjct: 61  LSETDLQDLSMAKMKPFSRTLSGFSEMAEETHGVGFSCSKTASLSCGSISETGE-DGGFV 120

Query: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180
           +VLVGGGVGGSGGRI GGGGSDGGDD SFG GDSNHGN++TDL+YQKMIEANPGNSMLLS
Sbjct: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDWSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240
           NYARFLKEVRGDLVKAQEYCGRAIL+NP DGNVLSMYAD+IWETQKD+PRAESYFNQAV+
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILNNPEDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240

Query: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEE--EDGLIEKPATSFFQGVHTPPPLAAAS 299
           AAP+DCYVLASYARFLWDA+E+EEEEEEEEEE  E+   EKPATSFFQGV +PPPLAAAS
Sbjct: 241 AAPEDCYVLASYARFLWDADEEEEEEEEEEEEVGEENFREKPATSFFQGVQSPPPLAAAS 299

[Close]

BLAST of Carg12125 vs. ExPASy TrEMBL
Match: A0A6J1JJW1 (uncharacterized protein LOC111485244 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485244 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.6e-126
Identity = 242/298 (81.21%), Postives = 265/298 (88.93%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKITRA 60
           M+LRSASTPL NSWLHHSRDS +E  IV+ IP++ SIVL  SP C SPIIDDSPR+ITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETGIVHHIPKSSSIVLSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISETGDRDGGFV 120
           LSETDLRD+S+++ KPFSRTLSGFSE+ EE D + F+ S   SL   SISETGD DG FV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVRFNPSEITSLSCGSISETGDADGRFV 120

Query: 121 NVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLS 180
           NVLVGGGVGGSGG I GGGGSDGGDDGSFG GDSNHGN++TDL+YQKMIEANPGNSMLLS
Sbjct: 121 NVLVGGGVGGSGGCIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAESYFNQAVQ 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYAD+IWETQKD+PRAESY NQAV+
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAVK 240

Query: 241 AAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGVHTPPPLAAAS 299
           AAP+DCYVLASYARFLWDAEE EEEEEEEEEEE+ L E+PAT FFQGVH PPP+AAAS
Sbjct: 241 AAPEDCYVLASYARFLWDAEE-EEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 297

[Close]

BLAST of Carg12125 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 245.7 bits (626), Expect = 4.6e-65
Identity = 161/310 (51.94%), Postives = 204/310 (65.81%), Query Frame = 0


Query: 1   MILRSASTPLFNSWLHHS--RDSYLEH-EIVNQIPRARSIVLCCSPG--CTSPI----ID 60
           M+LRSASTPL NS +H S  RDS +E  E V+QI R RSI L  S    C SP+     D
Sbjct: 1   MLLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSSD 60

Query: 61  DSPRKITRALSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRESISE 120
           DS R++ R  S++DLR ++  K  P S+ LSG + +++  + IGF    T+S   + IS 
Sbjct: 61  DSSRRMKRTASDSDLRHLTSTK-PPVSKFLSGGALMEDVDEGIGFGLIRTSSY--DGISW 120

Query: 121 TGDRDGGFVNVLVGGGVGG---SGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKM 180
             D D      + GGG GG    GG+   GG SDGGD           G+DNTD+HY+KM
Sbjct: 121 ALDED----TEVAGGGGGGMFHGGGKGRSGGRSDGGDG----------GDDNTDVHYRKM 180

Query: 181 IEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDT 240
           IEANPGN + LSNYA+FLKEVR D +KA+EYCGRAIL +P DGNVL+MYA+++W+  KD+
Sbjct: 181 IEANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDS 240

Query: 241 PRAESYFNQAVQAAPDDCYVLASYARFLWDAEEDEEEEEEEEEEEDGLIEKPATSFFQGV 299
            RAE+YFNQAV AAP+DCYV ASYARFLWDAEE+EEEE+EE  EE+   +    +FF G 
Sbjct: 241 SRAENYFNQAVAAAPEDCYVQASYARFLWDAEEEEEEEKEERHEEELEHQTSRMNFFTG- 290

[Close]

BLAST of Carg12125 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-44
Identity = 132/317 (41.64%), Postives = 180/317 (56.78%), Query Frame = 0


Query: 1   MILRSASTPLFNSWL--HHSRDSYLEHEIVNQIPRARSIVLCCSPGCTSPIIDDSPRKIT 60
           M+LRS S P+ NSWL  H SR+S  E E  +Q+ R  + +   S   +  I   +  ++ 
Sbjct: 1   MLLRSTSAPILNSWLPQHCSRESSPEPE--SQLWRRSTSLSLFS---SKSIDGHTGEQLH 60

Query: 61  RALSETDLRDMSMNKMKPFSRTLSGFSEVDEERDVIGFSRSNTASLRRES-------ISE 120
           +ALS  D +++ + K K    +    +   + R  +  +R    +L R S        S 
Sbjct: 61  QALS--DNKEIIILKSKSNEHSYKTPTSSRQRRSSLDETRYTKKTLDRSSPFLVERLFSS 120

Query: 121 TGDRDGGFVN----VLV---GGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLH 180
           +G  D    N     LV   GGG+GGSGG I  GGG  GG     G+ D     D TD +
Sbjct: 121 SGQGDKASSNDRLETLVSGGGGGMGGSGGNICNGGGGVGGS----GV-DGGRSEDATDTY 180

Query: 181 YQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWET 240
           Y++MI++NPGNS+L  NYA+FLKEV+GD+ KA+EYC RAIL N  DGNVLS+YAD+I   
Sbjct: 181 YREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILHN 240

Query: 241 QKDTPRAESYFNQAVQAAPDDCYVLASYARFLWDAEEDEEEE---EEEEEEEDGLIEKPA 299
            +D  RA SY+ QAV+ +P+DCYV ASYARFLWD +EDEE+E   EEEE   D     P 
Sbjct: 241 HQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEEDEALGEEEENLSDETGHVPP 300

[Close]

BLAST of Carg12125 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.2e-34
Identity = 103/221 (46.61%), Postives = 132/221 (59.73%), Query Frame = 0


Query: 59  RALSETD-LRDMSMNK---MKPFSRTLSGFSEVDEE--RDVIGFSRSNTASLRRESISET 118
           R LSE+D +R   M K    KP    +    E  EE  R   G+    +  L  E    T
Sbjct: 63  RVLSESDVIRSERMLKRVGSKPSPARIPEDDEAGEEEIRFADGWGSMISGGLPVEEKCFT 122

Query: 119 GDRDGGFVNVLVGGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEAN 178
           G   GG     VGGG G SGG  +GGG   GG +    IGD          +Y++M+ +N
Sbjct: 123 G---GG-----VGGGSGYSGGYGNGGG---GGYEDKSKIGD----------YYREMLRSN 182

Query: 179 PGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADMIWETQKDTPRAE 238
           P NS+LL NY +FL EV  D   A+EY GRAIL NPGDG  LSMY  +IWET++D  RA+
Sbjct: 183 PNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEKRAQ 242

Query: 239 SYFNQAVQAAPDDCYVLASYARFLWDAEEDEEEEEEEEEEE 274
            YF+QAV A+P+DC VL SYARF+W+AE+D++++EEEEEEE
Sbjct: 243 GYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEEEE 262

[Close]

BLAST of Carg12125 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 7.1e-34
Identity = 88/152 (57.89%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 125 GGGVGGSGGRISGGGGSDGGDDGSFGIGDSNHGNDNTDLHYQKMIEANPGNSMLLSNYAR 184
           GG  GG GGR  GG G+ GG  G         G  + D +Y++MI+  PG+++LLSNYAR
Sbjct: 85  GGSNGGFGGR--GGDGAGGGGGG---------GGGSVDGYYEEMIQRYPGDTLLLSNYAR 144

Query: 185 FLKEVRGDLVKAQEYCGRAILSNPG-DGNVLSMYADMIWETQKDTPRAESYFNQAVQAAP 244
           FLKEV+GD  KA+EYC RA+LS  G DG +LSMY D+IW+   D  RA+SY++QAVQ++P
Sbjct: 145 FLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSP 204

Query: 245 DDCYVLASYARFLWDAEEDEEEEEEEEEEEDG 276
           DDC VLASYARFLWDAEE E EEEE +  EDG
Sbjct: 205 DDCNVLASYARFLWDAEE-EVEEEESKHHEDG 224

[Close]

BLAST of Carg12125 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 2.9e-19
Identity = 53/128 (41.41%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 150 GIGDSNHGNDNTDLHYQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPG 209
           G  D N G+     +Y+ M+E  P + +LL NYA+FL E +GDL  A+EY  +  +  P 
Sbjct: 115 GYDDKNCGD-----YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPS 174

Query: 210 DGNVLSMYADMIWETQKDTPRAESYFNQAVQAAPDDCYVLASYARFLWD--AEEDEEEEE 269
           DG  L+ Y  ++ +  +D  +A SYF +AVQA+PDD  VLA+YA FLW+  A++D+E+++
Sbjct: 175 DGVALANYGRLVMKLHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDD 234

Query: 270 EEEEEEDG 276
           E+++E  G
Sbjct: 235 EDDDESSG 236

The following BLAST results are available for this feature:

BLAST of Carg12125 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021780.1	3.8e-162	100.00	hypothetical protein SDJN02_15507, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6587895.1	1.0e-159	98.66	hypothetical protein SDJN03_16460, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022929735.1	1.8e-156	97.65	uncharacterized protein LOC111436230 [Cucurbita moschata]	[more]
XP_023529549.1	1.7e-154	96.31	uncharacterized protein LOC111792370 [Cucurbita pepo subsp. pepo]	[more]
XP_022971924.1	3.2e-153	95.64	uncharacterized protein LOC111470595 [Cucurbita maxima]	[more]

BLAST of Carg12125 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg12125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EV56	8.8e-157	97.65	uncharacterized protein LOC111436230 OS=Cucurbita moschata OX=3662 GN=LOC1114362...	[more]
A0A6J1I9Z1	1.5e-153	95.64	uncharacterized protein LOC111470595 OS=Cucurbita maxima OX=3661 GN=LOC111470595...	[more]
A0A5A7U9I5	9.4e-127	82.33	Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. ...	[more]
A0A1S3BA31	9.4e-127	82.33	uncharacterized protein LOC103487441 OS=Cucumis melo OX=3656 GN=LOC103487441 PE=...	[more]
A0A6J1JJW1	3.6e-126	81.21	uncharacterized protein LOC111485244 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg12125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20190.1	4.6e-65	51.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G80130.1	1.2e-44	41.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G17940.1	3.2e-34	46.61	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	7.1e-34	57.89	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	2.9e-19	41.41	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 259..279
None	No IPR available	PFAM	PF13431	TPR_17	coord: 165..198 e-value: 1.3E-4 score: 22.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..276
None	No IPR available	PANTHER	PTHR26312:SF73	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 1..289
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..289
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 154..270 e-value: 1.2E-13 score: 52.8
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 164..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12125-RA	Carg12125-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding