Carg11454 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATAAATTTATTTTTAATTATATACACTTCCTTATATAAGGTTGTTTATAACGTACAAAAACACACTTTCAATCTTTAAGTTTGAAGTTAGTTTCAATTTAGTCTATAAGTTCAAAATAGACAGTTTAATTGAGATTTAGTAGAAAATAGTTTTAAAAAGTTGCTCAATCTACTTTGATCTTTAATTGGCTAAATGTTAATGGATTGTTTGTATTTTGTTGACTTGGTAATAGTATTGATGGAATAATTTTTTTTTTCTTTTTTGGGACTGATCTTTCTCCCTCCTCTCCCCTCCGCCAGCTTCTGAATCATTCAACTTCTTCAAAATGTTAAATGATTCAATAAAATCGTATAACATATACTGTTCCAAGTGCCAGAACTGTATCAACAATTTGATTCAAAGTGTTTTGAAATTAGAAGATGTTGAAGAATCATCTGCAAAATTTTCATACGAAGATGAAAAAGACATTCCAAAAAAGTGTTATGAAGTTCTTTATAAGTTTCTCAATTTGCATACCATACATTGTCCTGCTTGCACGAATTATGTCAGAGAGGTGACAATCCAACATGCTCCAAAACAATCCACGACTCTTGTACAAGTTCCAAAACCATCCATTCATGGTACAGGTGAGTTTGATGTAAAAAAGTGCCAAAATTTCATGCTAAATTTATGTGTTTTAGTTTTAGAATTGTTTGATAATGCATTGAGATTAATACCATTGTGTCGTATAAACTCTTTTTCCACTCTCGTCTTTTCTATACTCATTATAAGCAGATGAAAAAATTATAGACCATCAAGAAGGCTTAGTTATCACGATCTTCCATCCTGATGAACCAAGCACTAGAGTTAGAAGGTGGGAAATTCGTAGACTTATAGTACTTGGTGGTTTAATGGAATCAATTACAAGTTTAGCTATTGTAACTGCAGCAATGAGTGCAAAGATTTCTGATGGTAATGGTTTTCATTTCCTCTATTTCCCTTTTTCTTAAATAATGATTAGGCGATCTCTAGTTGATCTTGGATTGGGATTCTTGCAGGAAATATAGTAGCTTTGGCGTGGACAAATTTGATAGCTGGACTCTTTATTATTAGGCATGATGTAAGCATTTACCTTTTGTCTTTTGGGTTTTCAAGCTTTTGATGTAGTGAAACGTATGAAGTAAATGTACAGGTATCAAGATTGCAGAAGAAGAGAAAAATACCTGGAATTGAAGTGGACGGCAATAACTACAAAGAAGTATTGAAGGAAAAAATGTATAGTCTTCTCTGTTTTATCATCGCCTACTTATCTTTCTTGTGTTTTGGGTTAGTGCCACCACTGGTTTATGCACTCTCATCCCTCAAGATCAGAAACAAAAACCTCAAAATCATAGCGGCTGCAGGAGCTTCCCTTTCATGCACTGCACTTCTTGCTGTCCAGAAAGCTCACATTAATCAAAAGCCAAGACATAGGCTAGTTTATGTCAAAACTGCAGCCGTAGATGTTTCAGTGGGAGTTGGGGCTTTTGGCATATCATATCTAGCAGGTTACATGTTTGGACACCTTGCATAGGAACTTCTGTGGGACTTGTGAAACTCAGCACACCCACTTCATCATTTTGCTTTGGTTTCTGCAGAATATGGTTATACATAAGTCTTTGATCAACTTCTATGCTGGTTCAGTTGGTAAAGAAATGGGATATCTTAACTGGAATTGCTATGTTATTTAACAACCCAGTTCAGCACTTTATTCAATGATGCAATTCTTTATCGCCAGCTTGTCGGTTTACTTCAATATCTCACATTTACCCGACTCGACATTGCCTTTGTAATCAATAGAGTAGGTCAATTCATGATCATCCCACAATTCTTCTTTTTTTCTTTTCTTTGTGGATCAAGCAACCTGGCATTATGTTTAGTTGAGAAGATTTGTCTCTCACAACCCTTTTGTTGTAACTCTGTCAGGTTGGTGATACATCTGATACATCTGAATTGTCGTTCTACATATGGTTTTATTGCTTTTCTTGGCTCCAGTCCTATATCCTGGTTTGCCAACAACCAACACACCATTTCCTGCTCATCCACACTCTGGCGAAATATCGCTTGTTGGCTACTGTAACTGCTGATCTCTTTTGGTTGTGGCAGTTCCATTGTGATCTTCTTGTTCCTTTGACAGCCTCCTCCCCCGCTATGGTGTGACAATGTCAATTTTACTTGCAAAAAAACCAGTGTTGCTGCCATTTATATCTTCCATTTTGATCGTGACAAGGTTGTTCACAAGAACATTTTTGTTCACTTTATATCTTCCAAAGATCAGTTTGTGGATTTGCTCACCAAGCTGTTCTCATCCAAATCTTCTTGTCTTCTCGTGACCAACTTCTGACTTCTACCCAGTCTTCAGTTTGAGGGGGCATGTTATGAAGTGTTCTACATATTATCCGTGGTCATATTTTATGCCTTAAATTTTAAATAATGTTATTGTAATCTGCCAAATAAATGCTTTTAACTTATTTGCTTGTTCTCTCGATGTACATAAAGGGGTCATCACCACTATGAAATTCATGAAGGAAATGACATTCAATTTTGTCTATCTTCCTCGGTGTTTCTATAGCTCTCACTTATGGTTTCATGCTTCTATGTACATGAATATTAAGATTCATACTTTCTATACTGCCTCTGATATGCTCACAAAGCATAAGTTACAGCTACTGTTGGGTTTGCCTTACTTGAAAAAGGTTAGTATTAAATAAATCAGAAGCGGCTGCCAAAAGCTACAGGGGAGAAGATTGATAGACAATAATTCTCGAGAGTTAGAGAGTAAGTATTCTATGTGAATAAAAGCTTCAGCTCCCCCCTCCCTTCTCAGTGGATGCAGGCCTTGCTTTCAGAATCACTTTAATTCTGTGTTGTGCATGAACTTCATCTCTTATCTCCCTAATTCCTTCTGATTG TGATAAATTTATTTTTAATTATATACACTTCCTTATATAAGGTTGTTTATAACGTACAAAAACACACTTTCAATCTTTAAGTTTGAAGTTAGTTTCAATTTAGTCTATAAGTTCAAAATAGACAGTTTAATTGAGATTTAGTAGAAAATAGTTTTAAAAAGTTGCTCAATCTACTTTGATCTTTAATTGGCTAAATGTTAATGGATTGTTTGTATTTTGTTGACTTGGTAATAGTATTGATGGAATAATTTTTTTTTTCTTTTTTGGGACTGATCTTTCTCCCTCCTCTCCCCTCCGCCAGCTTCTGAATCATTCAACTTCTTCAAAATGTTAAATGATTCAATAAAATCGTATAACATATACTGTTCCAAGTGCCAGAACTGTATCAACAATTTGATTCAAAGTGTTTTGAAATTAGAAGATGTTGAAGAATCATCTGCAAAATTTTCATACGAAGATGAAAAAGACATTCCAAAAAAGTGTTATGAAGTTCTTTATAAGTTTCTCAATTTGCATACCATACATTGTCCTGCTTGCACGAATTATGTCAGAGAGGTGACAATCCAACATGCTCCAAAACAATCCACGACTCTTGTACAAGTTCCAAAACCATCCATTCATGGTACAGATGAAAAAATTATAGACCATCAAGAAGGCTTAGTTATCACGATCTTCCATCCTGATGAACCAAGCACTAGAGTTAGAAGGTGGGAAATTCGTAGACTTATAGTACTTGGTGGTTTAATGGAATCAATTACAAGTTTAGCTATTGTAACTGCAGCAATGAGTGCAAAGATTTCTGATGGAAATATAGTAGCTTTGGCGTGGACAAATTTGATAGCTGGACTCTTTATTATTAGGCATGATGTATCAAGATTGCAGAAGAAGAGAAAAATACCTGGAATTGAAGTGGACGGCAATAACTACAAAGAAGTATTGAAGGAAAAAATGTATAGTCTTCTCTGTTTTATCATCGCCTACTTATCTTTCTTGTGTTTTGGGTTAGTGCCACCACTGGTTTATGCACTCTCATCCCTCAAGATCAGAAACAAAAACCTCAAAATCATAGCGGCTGCAGGAGCTTCCCTTTCATGCACTGCACTTCTTGCTGTCCAGAAAGCTCACATTAATCAAAAGCCAAGACATAGGCTAGTTTATGTCAAAACTGCAGCCGTAGATGTTTCAGTGGGAGTTGGGGCTTTTGGCATATCATATCTAGCAGGTTACATGTTTGGACACCTTGCATAGGAACTTCTGTGGGACTTGTGAAACTCAGCACACCCACTTCATCATTTTGCTTTGGTTTCTGCAGAATATGGTTATACATAAGTCTTTGATCAACTTCTATGCTGGTTCAGTTGGTAAAGAAATGGGATATCTTAACTGGAATTGCTATGTTATTTAACAACCCAGTTCAGCACTTTATTCAATGATGCAATTCTTTATCGCCAGCTTGTCGGTTTACTTCAATATCTCACATTTACCCGACTCGACATTGCCTTTGTAATCAATAGAGTAGGTTGGTGATACATCTGATACATCTGAATTGTCGTTCTACATATGGTTTTATTGCTTTTCTTGGCTCCAGTCCTATATCCTGGTTTGCCAACAACCAACACACCATTTCCTGCTCATCCACACTCTGGCGAAATATCGCTTGTTGGCTACTGTAACTGCTGATCTCTTTTGGTTGTGGCAGTTCCATTGTGATCTTCTTGTTCCTTTGACAGCCTCCTCCCCCGCTATGGTGTGACAATGTCAATTTTACTTGCAAAAAAACCAGTGTTGCTGCCATTTATATCTTCCATTTTGATCGTGACAAGGTTGTTCACAAGAACATTTTTGTTCACTTTATATCTTCCAAAGATCAGTTTGTGGATTTGCTCACCAAGCTGTTCTCATCCAAATCTTCTTGTCTTCTCGTGACCAACTTCTGACTTCTACCCAGTCTTCAGTTTGAGGGGGCATGTTATGAAGTGTTCTACATATTATCCGTGGTCATATTTTATGCCTTAAATTTTAAATAATGTTATTGTAATCTGCCAAATAAATGCTTTTAACTTATTTGCTTGTTCTCTCGATGTACATAAAGGGGTCATCACCACTATGAAATTCATGAAGGAAATGACATTCAATTTTGTCTATCTTCCTCGGTGTTTCTATAGCTCTCACTTATGGTTTCATGCTTCTATGTACATGAATATTAAGATTCATACTTTCTATACTGCCTCTGATATGCTCACAAAGCATAAGTTACAGCTACTGTTGGGTTTGCCTTACTTGAAAAAGGTTAGTATTAAATAAATCAGAAGCGGCTGCCAAAAGCTACAGGGGAGAAGATTGATAGACAATAATTCTCGAGAGTTAGAGAGTAAGTATTCTATGTGAATAAAAGCTTCAGCTCCCCCCTCCCTTCTCAGTGGATGCAGGCCTTGCTTTCAGAATCACTTTAATTCTGTGTTGTGCATGAACTTCATCTCTTATCTCCCTAATTCCTTCTGATTG ATGTTAAATGATTCAATAAAATCGTATAACATATACTGTTCCAAGTGCCAGAACTGTATCAACAATTTGATTCAAAGTGTTTTGAAATTAGAAGATGTTGAAGAATCATCTGCAAAATTTTCATACGAAGATGAAAAAGACATTCCAAAAAAGTGTTATGAAGTTCTTTATAAGTTTCTCAATTTGCATACCATACATTGTCCTGCTTGCACGAATTATGTCAGAGAGGTGACAATCCAACATGCTCCAAAACAATCCACGACTCTTGTACAAGTTCCAAAACCATCCATTCATGGTACAGATGAAAAAATTATAGACCATCAAGAAGGCTTAGTTATCACGATCTTCCATCCTGATGAACCAAGCACTAGAGTTAGAAGGTGGGAAATTCGTAGACTTATAGTACTTGGTGGTTTAATGGAATCAATTACAAGTTTAGCTATTGTAACTGCAGCAATGAGTGCAAAGATTTCTGATGGAAATATAGTAGCTTTGGCGTGGACAAATTTGATAGCTGGACTCTTTATTATTAGGCATGATGTATCAAGATTGCAGAAGAAGAGAAAAATACCTGGAATTGAAGTGGACGGCAATAACTACAAAGAAGTATTGAAGGAAAAAATGTATAGTCTTCTCTGTTTTATCATCGCCTACTTATCTTTCTTGTGTTTTGGGTTAGTGCCACCACTGGTTTATGCACTCTCATCCCTCAAGATCAGAAACAAAAACCTCAAAATCATAGCGGCTGCAGGAGCTTCCCTTTCATGCACTGCACTTCTTGCTGTCCAGAAAGCTCACATTAATCAAAAGCCAAGACATAGGCTAGTTTATGTCAAAACTGCAGCCGTAGATGTTTCAGTGGGAGTTGGGGCTTTTGGCATATCATATCTAGCAGGTTACATGTTTGGACACCTTGCATAG MLNDSIKSYNIYCSKCQNCINNLIQSVLKLEDVEESSAKFSYEDEKDIPKKCYEVLYKFLNLHTIHCPACTNYVREVTIQHAPKQSTTLVQVPKPSIHGTDEKIIDHQEGLVITIFHPDEPSTRVRRWEIRRLIVLGGLMESITSLAIVTAAMSAKISDGNIVALAWTNLIAGLFIIRHDVSRLQKKRKIPGIEVDGNNYKEVLKEKMYSLLCFIIAYLSFLCFGLVPPLVYALSSLKIRNKNLKIIAAAGASLSCTALLAVQKAHINQKPRHRLVYVKTAAVDVSVGVGAFGISYLAGYMFGHLA Homology
BLAST of Carg11454 vs. NCBI nr
Match: KAG7014517.1 (Membrane protein of ER body 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 599.7 bits (1545), Expect = 1.4e-167 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
BLAST of Carg11454 vs. NCBI nr
Match: XP_022954207.1 (uncharacterized protein LOC111456533 isoform X2 [Cucurbita moschata]) HSP 1 Score: 584.3 bits (1505), Expect = 6.0e-163 Identity = 299/306 (97.71%), Postives = 302/306 (98.69%), Query Frame = 0
BLAST of Carg11454 vs. NCBI nr
Match: KAG6575995.1 (Membrane protein of ER body 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 581.6 bits (1498), Expect = 3.9e-162 Identity = 300/306 (98.04%), Postives = 301/306 (98.37%), Query Frame = 0
BLAST of Carg11454 vs. NCBI nr
Match: XP_022954206.1 (uncharacterized protein LOC111456533 isoform X1 [Cucurbita moschata]) HSP 1 Score: 579.7 bits (1493), Expect = 1.5e-161 Identity = 299/307 (97.39%), Postives = 302/307 (98.37%), Query Frame = 0
BLAST of Carg11454 vs. NCBI nr
Match: XP_022954208.1 (uncharacterized protein LOC111456533 isoform X3 [Cucurbita moschata]) HSP 1 Score: 579.7 bits (1493), Expect = 1.5e-161 Identity = 299/307 (97.39%), Postives = 302/307 (98.37%), Query Frame = 0
BLAST of Carg11454 vs. ExPASy Swiss-Prot
Match: Q8LPT3 (Membrane protein of ER body-like protein OS=Arabidopsis thaliana OX=3702 GN=MEBL PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.0e-19 Identity = 66/183 (36.07%), Postives = 101/183 (55.19%), Query Frame = 0
BLAST of Carg11454 vs. ExPASy Swiss-Prot
Match: Q8W4P8 (Membrane protein of ER body 1 OS=Arabidopsis thaliana OX=3702 GN=MEB1 PE=1 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18 Identity = 72/193 (37.31%), Postives = 101/193 (52.33%), Query Frame = 0
BLAST of Carg11454 vs. ExPASy Swiss-Prot
Match: F4KFS7 (Membrane protein of ER body 2 OS=Arabidopsis thaliana OX=3702 GN=MEB2 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.5e-18 Identity = 69/207 (33.33%), Postives = 113/207 (54.59%), Query Frame = 0
BLAST of Carg11454 vs. ExPASy TrEMBL
Match: A0A6J1GQF8 (uncharacterized protein LOC111456533 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1) HSP 1 Score: 584.3 bits (1505), Expect = 2.9e-163 Identity = 299/306 (97.71%), Postives = 302/306 (98.69%), Query Frame = 0
BLAST of Carg11454 vs. ExPASy TrEMBL
Match: A0A6J1GQA4 (uncharacterized protein LOC111456533 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 7.1e-162 Identity = 299/307 (97.39%), Postives = 302/307 (98.37%), Query Frame = 0
BLAST of Carg11454 vs. ExPASy TrEMBL
Match: A0A6J1GQF7 (uncharacterized protein LOC111456533 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456533 PE=3 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 7.1e-162 Identity = 299/307 (97.39%), Postives = 302/307 (98.37%), Query Frame = 0
BLAST of Carg11454 vs. ExPASy TrEMBL
Match: A0A6J1JQG4 (membrane protein of ER body 2-like OS=Cucurbita maxima OX=3661 GN=LOC111488012 PE=3 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 2.4e-85 Identity = 180/200 (90.00%), Postives = 184/200 (92.00%), Query Frame = 0
BLAST of Carg11454 vs. ExPASy TrEMBL
Match: A0A5D3CME8 (Membrane protein of ER body-like protein isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00400 PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 4.0e-32 Identity = 98/233 (42.06%), Postives = 136/233 (58.37%), Query Frame = 0
BLAST of Carg11454 vs. TAIR 10
Match: AT4G27870.1 (Vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 99.0 bits (245), Expect = 7.1e-21 Identity = 66/183 (36.07%), Postives = 101/183 (55.19%), Query Frame = 0
BLAST of Carg11454 vs. TAIR 10
Match: AT4G27860.1 (vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 95.5 bits (236), Expect = 7.8e-20 Identity = 72/193 (37.31%), Postives = 101/193 (52.33%), Query Frame = 0
BLAST of Carg11454 vs. TAIR 10
Match: AT4G27860.2 (vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 95.5 bits (236), Expect = 7.8e-20 Identity = 72/193 (37.31%), Postives = 101/193 (52.33%), Query Frame = 0
BLAST of Carg11454 vs. TAIR 10
Match: AT5G24290.2 (Vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 94.4 bits (233), Expect = 1.7e-19 Identity = 69/207 (33.33%), Postives = 113/207 (54.59%), Query Frame = 0
BLAST of Carg11454 vs. TAIR 10
Match: AT5G24290.1 (Vacuolar iron transporter (VIT) family protein ) HSP 1 Score: 94.4 bits (233), Expect = 1.7e-19 Identity = 69/207 (33.33%), Postives = 113/207 (54.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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