Carg11161 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATTCTAAGAGCTTGGTTTTTGTTTCATCTGTTGGCCGTCAACCTTCTTGCCCTCTTGCTTCCCCTCTCGCTCCTCCTCCTCGCTCGCCTCTCTTCCGCCCTCTATCTCGCCGGCCCGCCGTTGCTTCCGCCCCTGTTTCTCTCTCTTATCCTCTATCTAACCTCCCCTATTCTTATCCTTCTTGTTTCTTTCGTTGTCCTCTCCGCCCTCCTCCACTCCCTCACCGGAAAATCTGCTCTTCCGACCAAACTGCCTGCCCCTGTCTCCCAACCCCGTCTTTACACTACATGGATTTTCCTCTGCACTCTTCAGGTACGTCAATACACATTCATTCTTTTTAGTTTAAACGGTTGTGGATTATTGAGAGGGAGTCTCGTACTGACTAATTAACAAATTAGGCTTTTGAAAATTCCAAAACAAAAATCATGAGAGCTTATGCTCAATGTGTACCATATCATATTATTGTGGAGATTCGTGATCACTAACATTGTATCAAAGTCGTGCCCCTTAACTTAGCCATATCAATAAAATCCTTGTGTCGAACAGAGAATGTTTGATTAATCCACCACACTTAAATGGCGTGAAAGTTATCTTATTTATAATCAAATAAATTACATAAATGAAAATAACAATAAATGGAAAGATAGCTATGGTAGATATTTGACTTGTAATAAAATATCAAATATAATATATATGGTAAACTATAATTTATTACTAAATATCTTTAACACGAACAAATAAGTTATAAGACTCGACGGAACAGTCAAAGGTGAGTCAGGTGTCGAACAAAGGGTGTGCTTTGTTTGAGAACTTCTGATAAAGGAGTTGAATCTCAATTAAAAGGAGAGACTATTCGAGGACGGTGTACTTTGTTTGAGGGCTCCTGAGAAAGGAGTCGAATCTCAATTATAGGGAGAGACTATTCGAGGGCTACATAGATCTTAGGAGAGGCTCTATAATATATTTTGTTCGAGGGGAGAATTGTTGGGAGAGAGACTCACATCGGCTGATTAAGGAGTTTAATCATGAGTTTATAAGTAAGAAATAAATCTTTATACGAGGCGTTTTGGAGAAATCTAGAACAAAGTCATGAAAGTTTATGTTCAAAGTAGATAATATTGTTAGACAAACACGAATCTCCACAACGGTATGATATTGTCTACTTCGAGCATAAACTCTCTTGGCTTTGTTTTGTGCTTTTCTAAAAGGCTCATTCCAATGGAGGGAGTATTCTCTTGTTATAAATATATGATCATTTTCTAAATTAGCCAACGTAGGACTTTCATCATCCAACCAATATAACGTGATTCCTAAAATAAATATGGTAATTTATATACAATATTTTAATCAATTGAGCGAACAACAACAGGTATGTGTCGGCGTCGGGATCGAGGGGAGCTTATCAAGCGGCCTAAACAACCCAGCGGCAGGGCACATCGAGGGTGGTCTATGGAGGAGGTTGTTGTTCTTCGTTGGCTTGCATGAGGCGGTGGTGCACTGGACAAGGGCGGTGGTGAAGCCGGTGGTGGACGACACCGTATTTGGGGAATCTCGAAAGGAGAGGTGGTTTGAGACGGCGGCGACGGCGGTGAGCTTGGGTGGGGTGTGGTGGTGGCGATTGAGGGATGAGGCAGACGCGCTGGTGGTTGTGGCGGAAATAAAGTGGTTGACGTCGGCGGAATTGGGTCCGGCGGAGGTTGCTAATTGGTGCCTGTATTACATAATCGTAGGCATTGGAATTGGTAAGATTGTGAATTCTGTTGCATGGTTGGTTCGGATTTTGGTCTCTAAAAAACATTCTAAATGCTCGGATGAGGTTGTCGTTGTGAACAATGTTTGA ATGGAAATTCTAAGAGCTTGGTTTTTGTTTCATCTGTTGGCCGTCAACCTTCTTGCCCTCTTGCTTCCCCTCTCGCTCCTCCTCCTCGCTCGCCTCTCTTCCGCCCTCTATCTCGCCGGCCCGCCGTTGCTTCCGCCCCTGTTTCTCTCTCTTATCCTCTATCTAACCTCCCCTATTCTTATCCTTCTTGTTTCTTTCGTTGTCCTCTCCGCCCTCCTCCACTCCCTCACCGGAAAATCTGCTCTTCCGACCAAACTGCCTGCCCCTGTCTCCCAACCCCGTCTTTACACTACATGGATTTTCCTCTGCACTCTTCAGGTATGTGTCGGCGTCGGGATCGAGGGGAGCTTATCAAGCGGCCTAAACAACCCAGCGGCAGGGCACATCGAGGGTGGTCTATGGAGGAGGTTGTTGTTCTTCGTTGGCTTGCATGAGGCGGTGGTGCACTGGACAAGGGCGGTGGTGAAGCCGGTGGTGGACGACACCGTATTTGGGGAATCTCGAAAGGAGAGGTGGTTTGAGACGGCGGCGACGGCGGTGAGCTTGGGTGGGGTGTGGTGGTGGCGATTGAGGGATGAGGCAGACGCGCTGGTGGTTGTGGCGGAAATAAAGTGGTTGACGTCGGCGGAATTGGGTCCGGCGGAGGTTGCTAATTGGTGCCTGTATTACATAATCGTAGGCATTGGAATTGGTAAGATTGTGAATTCTGTTGCATGGTTGGTTCGGATTTTGGTCTCTAAAAAACATTCTAAATGCTCGGATGAGGTTGTCGTTGTGAACAATGTTTGA ATGGAAATTCTAAGAGCTTGGTTTTTGTTTCATCTGTTGGCCGTCAACCTTCTTGCCCTCTTGCTTCCCCTCTCGCTCCTCCTCCTCGCTCGCCTCTCTTCCGCCCTCTATCTCGCCGGCCCGCCGTTGCTTCCGCCCCTGTTTCTCTCTCTTATCCTCTATCTAACCTCCCCTATTCTTATCCTTCTTGTTTCTTTCGTTGTCCTCTCCGCCCTCCTCCACTCCCTCACCGGAAAATCTGCTCTTCCGACCAAACTGCCTGCCCCTGTCTCCCAACCCCGTCTTTACACTACATGGATTTTCCTCTGCACTCTTCAGGTATGTGTCGGCGTCGGGATCGAGGGGAGCTTATCAAGCGGCCTAAACAACCCAGCGGCAGGGCACATCGAGGGTGGTCTATGGAGGAGGTTGTTGTTCTTCGTTGGCTTGCATGAGGCGGTGGTGCACTGGACAAGGGCGGTGGTGAAGCCGGTGGTGGACGACACCGTATTTGGGGAATCTCGAAAGGAGAGGTGGTTTGAGACGGCGGCGACGGCGGTGAGCTTGGGTGGGGTGTGGTGGTGGCGATTGAGGGATGAGGCAGACGCGCTGGTGGTTGTGGCGGAAATAAAGTGGTTGACGTCGGCGGAATTGGGTCCGGCGGAGGTTGCTAATTGGTGCCTGTATTACATAATCGTAGGCATTGGAATTGGTAAGATTGTGAATTCTGTTGCATGGTTGGTTCGGATTTTGGTCTCTAAAAAACATTCTAAATGCTCGGATGAGGTTGTCGTTGTGAACAATGTTTGA MEILRAWFLFHLLAVNLLALLLPLSLLLLARLSSALYLAGPPLLPPLFLSLILYLTSPILILLVSFVVLSALLHSLTGKSALPTKLPAPVSQPRLYTTWIFLCTLQVCVGVGIEGSLSSGLNNPAAGHIEGGLWRRLLFFVGLHEAVVHWTRAVVKPVVDDTVFGESRKERWFETAATAVSLGGVWWWRLRDEADALVVVAEIKWLTSAELGPAEVANWCLYYIIVGIGIGKIVNSVAWLVRILVSKKHSKCSDEVVVVNNV Homology
BLAST of Carg11161 vs. NCBI nr
Match: KAG6581302.1 (hypothetical protein SDJN03_21304, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018022.1 hypothetical protein SDJN02_19888, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 499.6 bits (1285), Expect = 1.7e-137 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of Carg11161 vs. NCBI nr
Match: XP_022934389.1 (uncharacterized protein LOC111441578 [Cucurbita moschata]) HSP 1 Score: 498.8 bits (1283), Expect = 2.8e-137 Identity = 261/262 (99.62%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of Carg11161 vs. NCBI nr
Match: XP_023529111.1 (uncharacterized protein LOC111791848 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 482.3 bits (1240), Expect = 2.7e-132 Identity = 254/262 (96.95%), Postives = 256/262 (97.71%), Query Frame = 0
BLAST of Carg11161 vs. NCBI nr
Match: XP_022983396.1 (uncharacterized protein LOC111482002 [Cucurbita maxima]) HSP 1 Score: 471.9 bits (1213), Expect = 3.7e-129 Identity = 247/262 (94.27%), Postives = 253/262 (96.56%), Query Frame = 0
BLAST of Carg11161 vs. NCBI nr
Match: XP_038904328.1 (uncharacterized protein LOC120090682 [Benincasa hispida]) HSP 1 Score: 395.6 bits (1015), Expect = 3.4e-106 Identity = 212/263 (80.61%), Postives = 225/263 (85.55%), Query Frame = 0
BLAST of Carg11161 vs. ExPASy TrEMBL
Match: A0A6J1F2F5 (uncharacterized protein LOC111441578 OS=Cucurbita moschata OX=3662 GN=LOC111441578 PE=4 SV=1) HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137 Identity = 261/262 (99.62%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of Carg11161 vs. ExPASy TrEMBL
Match: A0A6J1J235 (uncharacterized protein LOC111482002 OS=Cucurbita maxima OX=3661 GN=LOC111482002 PE=4 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 1.8e-129 Identity = 247/262 (94.27%), Postives = 253/262 (96.56%), Query Frame = 0
BLAST of Carg11161 vs. ExPASy TrEMBL
Match: A0A1S3BZH0 (uncharacterized protein LOC103494729 OS=Cucumis melo OX=3656 GN=LOC103494729 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 7.3e-99 Identity = 201/265 (75.85%), Postives = 221/265 (83.40%), Query Frame = 0
BLAST of Carg11161 vs. ExPASy TrEMBL
Match: A0A0A0KWP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003705 PE=4 SV=1) HSP 1 Score: 366.3 bits (939), Expect = 1.1e-97 Identity = 201/265 (75.85%), Postives = 219/265 (82.64%), Query Frame = 0
BLAST of Carg11161 vs. ExPASy TrEMBL
Match: A0A5A7TRD0 (Histone-lysine N-methyltransferase EZA1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001470 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 1.1e-94 Identity = 189/238 (79.41%), Postives = 206/238 (86.55%), Query Frame = 0
BLAST of Carg11161 vs. TAIR 10
Match: AT1G02570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02575.1); Has 108 Blast hits to 55 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 152.1 bits (383), Expect = 6.0e-37 Identity = 101/257 (39.30%), Postives = 148/257 (57.59%), Query Frame = 0
BLAST of Carg11161 vs. TAIR 10
Match: AT1G02575.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02570.1). ) HSP 1 Score: 134.0 bits (336), Expect = 1.7e-31 Identity = 101/261 (38.70%), Postives = 145/261 (55.56%), Query Frame = 0
BLAST of Carg11161 vs. TAIR 10
Match: AT2G47360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02570.1); Has 58 Blast hits to 55 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 131.0 bits (328), Expect = 1.4e-30 Identity = 96/264 (36.36%), Postives = 140/264 (53.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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