Carg11152 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11152
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein .
Location	Carg_Chr14: 4963070 .. 4966952 (+)
RNA-Seq Expression	Carg11152
Synteny	Carg11152

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGAAAAACCAAAGAAGATCGTACTATTATCCTTCTTCATCAACGATCCTAAACTGGTTGCGGTGATTCCAGTTTCCATAAATTGCCAACATTATCCTCTTTCTCAATCTAAATGATCGTCGATTTTGTACTTTTTCCTTCAATTTCTTGCTTGGAAAACTGCTGAAATTCCCCTGATGGGCGTTGAATCGAACTCCGGGCCGCCGCCGCCGCCGCCTCCATCGTCGTCGTCGTCTTCTACGCCATCTCCGAGCGGGAAGAGGGCTAGAGATCCCGACGATGAAGTTTATCTCGACAATTTTCACTCTCACAAGCGCTACCTAAGTGAGGTACCCCTTGTGTGCCCTTAATTTATTGTCAGGGCATCTGAAACTTCTTTGCCTTTACACATTTTGTTTTGATCCAGAAAAGCTATCGGTTTGTAGGTTGAACTTGAAATTTCAGCGTTTAGGGTATGAGTCTTTGTAGCATTTCTTAATTTGGGTCGATTATGCTCTTTCAGTTTTGCGTCATTCCTGTGTCTGCCTTTCTGGGTGCAAAATTCCCTCCTAACGTATATCCCTTCTTTGTTAATGATCTTGCACAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCTCTTTCAGAGAATCTCATGGATTCCCCTGCTAGGTCAGAGTCCATGCTTTATCTAAGGTAATGGAATATGTTCCAATAAAGTTTAACTGATTTACTTTTAGATTGTCTTGTATACGAACGAGAATTTTAATACATAGAAGTTTACAAGCTCTTGTGCTGTATAAGATTATAGAAACAAATGGATGTTACTGGAAGAAATTGAAATTCTCCATTGTAACAAATCTTGTACTTTTGAAATGCGTCTGAAATGCCATTATGGGTCGGGATTTCTGAAACAAAACTCTCTTGATTCCTTTACTTAGTATTCTCAAGATGTAGTTTTCCTAAAAAACTATGAATTTCCTTTACACTGCAAATAAAAAGTTACCGAGTTTATCCAGAAAGTTCGAATCTGACATTTAATTTCAAAATGCAATTGGCTCAACAAAATGCACAGTTCCAAACTTCGAAGTACCCTTCCCAGATTCTTTTAGGTAGAGTTTATCCTATCTACTTTACATGCCTATTGAAGAAGCTTATCGTCGTTACCTATTGATGCTTGTGCTGTTATAACCAGGCAGTAATGATGCACTTGGTGTATTCTAGGACAGCGAATTTTCATGGTTTTAATATGTGAGGTGTATGTGCTTCACTTCAGGCAAAAGTTCGATAAATGTTGTTTCGTGTACCATCTTGGTTTGAACGGAGGAGTATTTATTATTCTTTGTTAAAATCTGATGGCTGAAAGATGAATAATGTCCACGAGGATGGTTTTCCCTGTTCTTATCTTCTGCCCCATCTTGGAGATTTAAAAATCTTGTCTGATTATTGTTATTTTTTCCTAGAATTGATCATTCATCCTTCTCTCTTAAGTTTGGCTTTGTACATATTGTATGTGGTAAAGTACATCCAAAGCCTTGGTATGCATGTTAAAATTTTCTTCCATTAGTTACATTATAAGAAGAATCTCTCTAGTACGTGCATACCACAACTTGCGTTCATGAGACTTCCAATTTCTTTTTTTCTTAATGTGGTTTTAAGATTTAACGAGGATATAGATGTATCATTTTGAATTTTCATTATGATCTTTCTGCTCCGTAGATTTAACTATACTTTAATTCAACATTGTGGGACTGATGATTTAGACAACCCACCTTTAGAACAAATGTGCAATGCCTTAACAAGTTGAAATCTGCTTAAAACGACACAGAGTCAACTTTATGTTGTTGAAAGTATGTTAGTTCAGGAGACTTGATTGAAATGTAAGGTCAGGAGACTTCTGTATTCCTTCTAGTTGTGCAACAAATGGTAGTCTTATTTTCTACAAACAATGTTTTATTTCAAAACTCGGGAGTTCATTGCTATTGATATTCATTCGTATAAATAGTAGTTTATTTTATTTTTTTTTATTTATTTATTTATTTTTATTTTTAAACGGTAGTTGGGAAGTGTAACGGAAGAAACTATGATGAACTAGATTAAAACATTATTATCTGAAATTGTGATCTATCTTTAAAGTTAGTTAAGGTTTCTAGATCACAAAAGACATGCATATCTCTTCTTCTCATCTGTGTTCCACTGTCTAAACTAGTAGCAAAGAGATGCAGTATTCACCTATTCCAACTCTTCTGCAATCTTAGAGCCTCTTACTGCAACCCTTATTCTTTGGTTTAAAACTTTTTCCCTCATTGTATGTTTATTCCTTCCAGTTTGGCCAAATCGCATGCATCTCGACTAATTCTAATTATGTAGAAAATCAATTTCCCACTGCCACCTAGAGCCATGTATTACATTTTGGGTCAGTATTTCGTTTAATATTGTATGATCCTAAATGATGGTTTTGGGATTTTCCGATTTTAATCTTTTTTCTTTTTTCTCTAACACTACATCTCAGGGATGAAATGTCCTGCCAATATTCTCCTATGTCGGAAGATTCAGATGACTGCCGGTTTTGTGAGACATCCACAAACTTATTTCCCTCGCAGTCTGATAGTAGTGTACCTACCAGTCCAGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGATGACTCCTTCAACAGGTACCAATACTTCACTTGGATGTAATACTGGTCCCGTCACTAGCTTGCAGCCCCATCAACGCGGATCAGATTCTGAGGGTCGTTTCCCATCGTCTCCTAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGCTCAGTGCAAATGAGAGCACAGCCTCATGGCCCATCATCTATGGAGTTGCCATATTGCTCCATGCCTGAACCTGGACCTAACATAGAAGCCGAAGAGCGGTCATGTTCTTTCATAAAATCGTTGGTTGATGAAAGAGTTTATCAACTTGGGGAATGCTCCTCAATGGGAGTGTCCGAACCTGAATATAACGAACAGAAATCTTGCAAGGACTTGAACAGGGAAATGAAAGACAGTGAGTCTGGAGGGTAGTAGTAAATGCTCAGCAGAGGAAAAATCTCTTCTAACATAACACATGGGACACATTGCTGCTGTGGAACTGTGAAGTGTTTGTTTTTTGGTTCAACCTCCATGGAAATTCTGTTTTTGCATATGCTGCAAAATTGCTTTTGCTTGATTGAGTATGGTTTGGTCTTCTTCTAGGTCCTTTCCCGAGTGTGTGGTGCCTTGTGTGCTGTGTTCATTGTCGAGCGAGCTATTCTTATGAAGCCCGAGTCGAGAAGAGATGTTCATCGTCAAGCTTGTGTGATCAACTCTGTCTATTTGATTCCTACTCGAGCTCGAGTTGAGAGAAGATGTTTCTCGGAGCTAATTTTCTAGATAAAACGCTGCTGCGGCTTTAGAGGTCACAAGATTGAAGCTGCCAGTGTTCCATTTGTTCCGTATTTATAACGCTGCTATTATTGAATTTTTGTTCTAATTGCCTTCTGAACTTGCAGGCAAAATTGATCGGAAAATCAAAAGATGAATAGAGAGATGATATTATATGTAGAGTTTCATCACCTGGGTCATAAACACGGCTGTATTGATGGGGACTTATTGGGCCGTTTCTTCCAAAGAGAAAGCCCAGCCGTATTAAAAGCCCGTATGGATGGGCTTAAATAATTAAGAAAAAGGCAATCCACGGAGGCAGGTAGCTAAATATAACTACCGATTTTGAAGAACAACTAAATTAATGGAAACATATCGTTAAAGGTAAACATTTTCTTTTTAAAAAAAAAAAAACTAAATTAATGGATACCTACCAAATATTTTACCTGCGAATATAAAATATAAAATATTGAAAA

mRNA sequence

AAAAGGAAAAACCAAAGAAGATCGTACTATTATCCTTCTTCATCAACGATCCTAAACTGGTTGCGGTGATTCCAGTTTCCATAAATTGCCAACATTATCCTCTTTCTCAATCTAAATGATCGTCGATTTTGTACTTTTTCCTTCAATTTCTTGCTTGGAAAACTGCTGAAATTCCCCTGATGGGCGTTGAATCGAACTCCGGGCCGCCGCCGCCGCCGCCTCCATCGTCGTCGTCGTCTTCTACGCCATCTCCGAGCGGGAAGAGGGCTAGAGATCCCGACGATGAAGTTTATCTCGACAATTTTCACTCTCACAAGCGCTACCTAAGTGAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCTCTTTCAGAGAATCTCATGGATTCCCCTGCTAGGTCAGAGTCCATGCTTTATCTAAGGGATGAAATGTCCTGCCAATATTCTCCTATGTCGGAAGATTCAGATGACTGCCGGTTTTGTGAGACATCCACAAACTTATTTCCCTCGCAGTCTGATAGTAGTGTACCTACCAGTCCAGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGATGACTCCTTCAACAGGTACCAATACTTCACTTGGATGTAATACTGGTCCCGTCACTAGCTTGCAGCCCCATCAACGCGGATCAGATTCTGAGGGTCGTTTCCCATCGTCTCCTAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGCTCAGTGCAAATGAGAGCACAGCCTCATGGCCCATCATCTATGGAGTTGCCATATTGCTCCATGCCTGAACCTGGACCTAACATAGAAGCCGAAGAGCGGTCATGTTCTTTCATAAAATCGTTGGTTGATGAAAGAGTTTATCAACTTGGGGAATGCTCCTCAATGGGAGTGTCCGAACCTGAATATAACGAACAGAAATCTTGCAAGGACTTGAACAGGGAAATGAAAGACAGTGAGTCTGGAGGGTAGTAGTAAATGCTCAGCAGAGGAAAAATCTCTTCTAACATAACACATGGGACACATTGCTGCTGTGGAACTGTGAAGTGTTTGTTTTTTGGTTCAACCTCCATGGAAATTCTGTTTTTGCATATGCTGCAAAATTGCTTTTGCTTGATTGAGTATGGTTTGGTCTTCTTCTAGGTCCTTTCCCGAGTGTGTGGTGCCTTGTGTGCTGTGTTCATTGTCGAGCGAGCTATTCTTATGAAGCCCGAGTCGAGAAGAGATGTTCATCGTCAAGCTTGTGTGATCAACTCTGTCTATTTGATTCCTACTCGAGCTCGAGTTGAGAGAAGATGTTTCTCGGAGCTAATTTTCTAGATAAAACGCTGCTGCGGCTTTAGAGGTCACAAGATTGAAGCTGCCAGTGTTCCATTTGTTCCGTATTTATAACGCTGCTATTATTGAATTTTTGTTCTAATTGCCTTCTGAACTTGCAGGCAAAATTGATCGGAAAATCAAAAGATGAATAGAGAGATGATATTATATGTAGAGTTTCATCACCTGGGTCATAAACACGGCTGTATTGATGGGGACTTATTGGGCCGTTTCTTCCAAAGAGAAAGCCCAGCCGTATTAAAAGCCCGTATGGATGGGCTTAAATAATTAAGAAAAAGGCAATCCACGGAGGCAGGTAGCTAAATATAACTACCGATTTTGAAGAACAACTAAATTAATGGAAACATATCGTTAAAGGTAAACATTTTCTTTTTAAAAAAAAAAAAACTAAATTAATGGATACCTACCAAATATTTTACCTGCGAATATAAAATATAAAATATTGAAAA

Coding sequence (CDS)

ATGGGCGTTGAATCGAACTCCGGGCCGCCGCCGCCGCCGCCTCCATCGTCGTCGTCGTCTTCTACGCCATCTCCGAGCGGGAAGAGGGCTAGAGATCCCGACGATGAAGTTTATCTCGACAATTTTCACTCTCACAAGCGCTACCTAAGTGAGATAATGGCTTCTAGTTTGAATGGATTGACGGTTGGGGACCCTCTTTCAGAGAATCTCATGGATTCCCCTGCTAGGTCAGAGTCCATGCTTTATCTAAGGGATGAAATGTCCTGCCAATATTCTCCTATGTCGGAAGATTCAGATGACTGCCGGTTTTGTGAGACATCCACAAACTTATTTCCCTCGCAGTCTGATAGTAGTGTACCTACCAGTCCAGTCTCTCCATACCGATATCAGAGGCCATTCAGTGGGATGACTCCTTCAACAGGTACCAATACTTCACTTGGATGTAATACTGGTCCCGTCACTAGCTTGCAGCCCCATCAACGCGGATCAGATTCTGAGGGTCGTTTCCCATCGTCTCCTAGTGATATATGTCACTCAGCAGATCTGAGAAGGGCTGCGCTCCTGCGCTCAGTGCAAATGAGAGCACAGCCTCATGGCCCATCATCTATGGAGTTGCCATATTGCTCCATGCCTGAACCTGGACCTAACATAGAAGCCGAAGAGCGGTCATGTTCTTTCATAAAATCGTTGGTTGATGAAAGAGTTTATCAACTTGGGGAATGCTCCTCAATGGGAGTGTCCGAACCTGAATATAACGAACAGAAATCTTGCAAGGACTTGAACAGGGAAATGAAAGACAGTGAGTCTGGAGGGTAG

Protein sequence

MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGECSSMGVSEPEYNEQKSCKDLNREMKDSESGG

Homology

[Close]

BLAST of Carg11152 vs. NCBI nr
Match: KAG6581290.1 (hypothetical protein SDJN03_21292, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018013.1 hypothetical protein SDJN02_19879 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 536.2 bits (1380), Expect = 1.6e-148
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60
           MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL
Sbjct: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60

Query: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120
           TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP
Sbjct: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120

Query: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180
           TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240
           DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE
Sbjct: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240

Query: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESGG 272
           CSSMGVSEPEYNEQKSCKDLNREMKDSESGG
Sbjct: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESGG 271

[Close]

BLAST of Carg11152 vs. NCBI nr
Match: XP_022934215.1 (uncharacterized protein LOC111441454 isoform X1 [Cucurbita moschata])

HSP 1 Score: 530.0 bits (1364), Expect = 1.2e-146
Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60
           MGVESNSG PPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL
Sbjct: 1   MGVESNSG-PPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60

Query: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120
           TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP
Sbjct: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120

Query: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180
           TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240
           DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE
Sbjct: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240

Query: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESGG 272
           CSSMGVSEPEYNEQKSCKDLNREMKDSESGG
Sbjct: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESGG 270

[Close]

BLAST of Carg11152 vs. NCBI nr
Match: XP_023526160.1 (uncharacterized protein LOC111789720 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525.8 bits (1353), Expect = 2.2e-145
Identity = 269/274 (98.18%), Postives = 269/274 (98.18%), Query Frame = 0


Query: 1   MGVESNSG---PPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSL 60
           MGVESNS    PPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSL
Sbjct: 1   MGVESNSAPPPPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSL 60

Query: 61  NGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDS 120
           NGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDS
Sbjct: 61  NGLTVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDS 120

Query: 121 SVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDIC 180
           SVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDIC
Sbjct: 121 SVPTSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDIC 180

Query: 181 HSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQ 240
           HSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQ
Sbjct: 181 HSADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQ 240

Query: 241 LGECSSMGVSEPEYNEQKSCKDLNREMKDSESGG 272
           LGECSSMGVSEPEYNEQKSCKDLN EMKDSESGG
Sbjct: 241 LGECSSMGVSEPEYNEQKSCKDLNGEMKDSESGG 274

[Close]

BLAST of Carg11152 vs. NCBI nr
Match: XP_022984066.1 (uncharacterized protein LOC111482488 isoform X1 [Cucurbita maxima])

HSP 1 Score: 510.8 bits (1314), Expect = 7.4e-141
Identity = 260/271 (95.94%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60
           MGVESNS PPPPP    SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL
Sbjct: 1   MGVESNSAPPPPP----SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60

Query: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120
           TVGD LSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSD+SVP
Sbjct: 61  TVGDSLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDNSVP 120

Query: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180
           TSPVSPYRYQRPFSGMTPST TNTSLGCNT PVTSLQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 TSPVSPYRYQRPFSGMTPSTATNTSLGCNTSPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240
           DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE
Sbjct: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240

Query: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESGG 272
           CS+MGVSEPEYNEQKSCKDLNREMKD ESGG
Sbjct: 241 CSAMGVSEPEYNEQKSCKDLNREMKDGESGG 267

[Close]

BLAST of Carg11152 vs. NCBI nr
Match: XP_038904570.1 (uncharacterized protein LOC120090942 [Benincasa hispida])

HSP 1 Score: 484.2 bits (1245), Expect = 7.4e-133
Identity = 249/271 (91.88%), Postives = 256/271 (94.46%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60
           MGVESNS PPP      SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL
Sbjct: 1   MGVESNSAPPP------SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60

Query: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120
           TVGDPLSENLMDSPARSESMLY R+EMS QYSPMSEDSDDCRFCETSTNLFP+QSDSSVP
Sbjct: 61  TVGDPLSENLMDSPARSESMLYQREEMSWQYSPMSEDSDDCRFCETSTNLFPTQSDSSVP 120

Query: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180
           TSPVSPYRYQRPFSG+TPSTGTNTSLGC+T PVTSLQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 TSPVSPYRYQRPFSGVTPSTGTNTSLGCSTSPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240
           DLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAEER CS IKSLVDER +QL E
Sbjct: 181 DLRRAALLRSVQMRAQPLGPSSMELPYCSMPEPGPNIEAEERPCSCIKSLVDERDFQLEE 240

Query: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESGG 272
           CSSMGVSEPEYNE+KSCKDLNR+MKDSESGG
Sbjct: 241 CSSMGVSEPEYNEEKSCKDLNRDMKDSESGG 265

[Close]

BLAST of Carg11152 vs. ExPASy TrEMBL
Match: A0A6J1F722 (uncharacterized protein LOC111441454 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441454 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 5.7e-147
Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60
           MGVESNSG PPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL
Sbjct: 1   MGVESNSG-PPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60

Query: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120
           TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP
Sbjct: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120

Query: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180
           TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240
           DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE
Sbjct: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240

Query: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESGG 272
           CSSMGVSEPEYNEQKSCKDLNREMKDSESGG
Sbjct: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESGG 270

[Close]

BLAST of Carg11152 vs. ExPASy TrEMBL
Match: A0A6J1J464 (uncharacterized protein LOC111482488 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482488 PE=4 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.6e-141
Identity = 260/271 (95.94%), Postives = 262/271 (96.68%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60
           MGVESNS PPPPP    SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL
Sbjct: 1   MGVESNSAPPPPP----SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60

Query: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120
           TVGD LSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSD+SVP
Sbjct: 61  TVGDSLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDNSVP 120

Query: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180
           TSPVSPYRYQRPFSGMTPST TNTSLGCNT PVTSLQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 TSPVSPYRYQRPFSGMTPSTATNTSLGCNTSPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240
           DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE
Sbjct: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240

Query: 241 CSSMGVSEPEYNEQKSCKDLNREMKDSESGG 272
           CS+MGVSEPEYNEQKSCKDLNREMKD ESGG
Sbjct: 241 CSAMGVSEPEYNEQKSCKDLNREMKDGESGG 267

[Close]

BLAST of Carg11152 vs. ExPASy TrEMBL
Match: A0A5A7TRC2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001370 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.3e-132
Identity = 250/273 (91.58%), Postives = 257/273 (94.14%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60
           MGVESNS PPPPP   +SSSSTPSPSGKRARDP+DEVYLDNFHSHKRYLSEIMASSLNGL
Sbjct: 1   MGVESNSAPPPPP---TSSSSTPSPSGKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGL 60

Query: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120
           TVG+PLSENLMDSPARSESMLY RDEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVP
Sbjct: 61  TVGEPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120

Query: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180
           TSPVSPYRYQRPFSGM PS GTNTSLGC+T PVTSLQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 TSPVSPYRYQRPFSGMAPSNGTNTSLGCSTSPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240
           DLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL E
Sbjct: 181 DLRRAALLRSVQMRAQPAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEE 240

Query: 241 CSSM--GVSEPEYNEQKSCKDLNREMKDSESGG 272
           CSSM  GVSE EYNEQKSCKDLNR+MKDS+SGG
Sbjct: 241 CSSMGLGVSESEYNEQKSCKDLNRDMKDSQSGG 270

[Close]

BLAST of Carg11152 vs. ExPASy TrEMBL
Match: A0A1S3BXT2 (uncharacterized protein LOC103494744 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494744 PE=4 SV=1)

HSP 1 Score: 481.5 bits (1238), Expect = 2.3e-132
Identity = 250/273 (91.58%), Postives = 257/273 (94.14%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60
           MGVESNS PPPPP   +SSSSTPSPSGKRARDP+DEVYLDNFHSHKRYLSEIMASSLNGL
Sbjct: 1   MGVESNSAPPPPP---TSSSSTPSPSGKRARDPEDEVYLDNFHSHKRYLSEIMASSLNGL 60

Query: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120
           TVG+PLSENLMDSPARSESMLY RDEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVP
Sbjct: 61  TVGEPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120

Query: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180
           TSPVSPYRYQRPFSGM PS GTNTSLGC+T PVTSLQPHQRGSDSEGRFPSSPSDICHSA
Sbjct: 121 TSPVSPYRYQRPFSGMAPSNGTNTSLGCSTSPVTSLQPHQRGSDSEGRFPSSPSDICHSA 180

Query: 181 DLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLGE 240
           DLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL E
Sbjct: 181 DLRRAALLRSVQMRAQPAGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLEE 240

Query: 241 CSSM--GVSEPEYNEQKSCKDLNREMKDSESGG 272
           CSSM  GVSE EYNEQKSCKDLNR+MKDS+SGG
Sbjct: 241 CSSMGLGVSESEYNEQKSCKDLNRDMKDSQSGG 270

[Close]

BLAST of Carg11152 vs. ExPASy TrEMBL
Match: A0A0A0KWN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003080 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.4e-131
Identity = 251/274 (91.61%), Postives = 256/274 (93.43%), Query Frame = 0


Query: 1   MGVESNSGPPPPPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60
           MGVESNS PPPP    +SSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL
Sbjct: 1   MGVESNSAPPPP----TSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGL 60

Query: 61  TVGDPLSENLMDSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120
           TVGDPLSENLMDSPARSESMLY RDEMS QYSPMSEDSDDCRFCETSTNLFPSQSDSSVP
Sbjct: 61  TVGDPLSENLMDSPARSESMLYQRDEMSWQYSPMSEDSDDCRFCETSTNLFPSQSDSSVP 120

Query: 121 TSPVSPYRYQRPFSGMTPSTGTNTSLGCN-TGPVTSLQPHQRGSDSEGRFPSSPSDICHS 180
           TSPVSPYRYQRPFSG+ PSTGTNTSLGC+ T PVTSLQPHQRGSDSEGRFPSSPSDICHS
Sbjct: 121 TSPVSPYRYQRPFSGVAPSTGTNTSLGCSTTSPVTSLQPHQRGSDSEGRFPSSPSDICHS 180

Query: 181 ADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLG 240
           ADLRRAALLRSVQMRAQP GPSSMELPYCSMPEPGPNIEAE+R CS IKSLVDERVYQL 
Sbjct: 181 ADLRRAALLRSVQMRAQPPGPSSMELPYCSMPEPGPNIEAEDRPCSCIKSLVDERVYQLE 240

Query: 241 ECSSM--GVSEPEYNEQKSCKDLNREMKDSESGG 272
           ECSSM  GVSE EYNEQKSCKDLNR+MKDS SGG
Sbjct: 241 ECSSMGLGVSESEYNEQKSCKDLNRDMKDSRSGG 270

[Close]

BLAST of Carg11152 vs. TAIR 10
Match: AT2G25920.1 (BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein (TAIR:AT2G25910.2); Has 131 Blast hits to 125 proteins in 54 species: Archae - 0; Bacteria - 50; Metazoa - 12; Fungi - 12; Plants - 41; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 228.0 bits (580), Expect = 8.9e-60
Identity = 146/265 (55.09%), Postives = 169/265 (63.77%), Query Frame = 0


Query: 12  PPPPSSSSSSTPSPSGKRARDPDDEVYLDNFHSHKRYLSEIMASSLNGLTVGDPLSENLM 71
           PP P S S    SP GKR RDP+DEVYLDN  S KRYLSEIMA SLNGLTVGD L  N++
Sbjct: 30  PPVPISVS----SPCGKRTRDPEDEVYLDNLRSQKRYLSEIMACSLNGLTVGDSLPVNML 89

Query: 72  DSPARSESMLYLRDEMSCQYSPMSEDSDDCRFCE--TSTNLFPSQSDSSVPTSPVSPYRY 131
           +SPARSES LY RD++S QYSPMSEDSD+ RFCE  T+T    S    S PTSPVSPYRY
Sbjct: 90  ESPARSESFLYHRDDLSLQYSPMSEDSDEARFCEDPTATASTSSSQPESRPTSPVSPYRY 149

Query: 132 QRPFSGMTPSTGTNT----------SLGCNTGPVTSLQPHQRGSDSEGRFPSSPSDICHS 191
           QRP +       + T          S+  N    T+ Q  QRGSD+EGRFPSSPSDICHS
Sbjct: 150 QRPLTSTNSPQPSPTILHHSHTCPASMISNAATTTTPQSRQRGSDTEGRFPSSPSDICHS 209

Query: 192 ADLRRAALLRSVQMRAQPHGPSSMELPYCSMPEPGPNIEAEERSCSFIKSLVDERVYQLG 251
            DLRR ALLRSVQMR QP G SS   P         NI+ EER CS  KS+ ++R Y  G
Sbjct: 210 GDLRRTALLRSVQMRTQPCGYSSSSGP--------SNIDGEERMCS--KSMEEDRGYNKG 269

Query: 252 ECSSMGVSEPEYNEQKSCKDLNREM 265
           E   +  +E   ++ KSCK L+  +
Sbjct: 270 E--DIPYAEVS-SKSKSCKALDMRL 277

The following BLAST results are available for this feature:

BLAST of Carg11152 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6581290.1	1.6e-148	100.00	hypothetical protein SDJN03_21292, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022934215.1	1.2e-146	99.63	uncharacterized protein LOC111441454 isoform X1 [Cucurbita moschata]	[more]
XP_023526160.1	2.2e-145	98.18	uncharacterized protein LOC111789720 [Cucurbita pepo subsp. pepo]	[more]
XP_022984066.1	7.4e-141	95.94	uncharacterized protein LOC111482488 isoform X1 [Cucurbita maxima]	[more]
XP_038904570.1	7.4e-133	91.88	uncharacterized protein LOC120090942 [Benincasa hispida]	[more]

BLAST of Carg11152 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg11152 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F722	5.7e-147	99.63	uncharacterized protein LOC111441454 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J464	3.6e-141	95.94	uncharacterized protein LOC111482488 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7TRC2	2.3e-132	91.58	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BXT2	2.3e-132	91.58	uncharacterized protein LOC103494744 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KWN0	4.4e-131	91.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003080 PE=4 SV=1	[more]

BLAST of Carg11152 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25920.1	8.9e-60	55.09	BEST Arabidopsis thaliana protein match is: 3'-5' exonuclease domain-containing ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..271
None	No IPR available	PANTHER	PTHR35717:SF1	OS05G0156200 PROTEIN	coord: 6..269
None	No IPR available	PANTHER	PTHR35717	OS05G0156200 PROTEIN	coord: 6..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11152-RA	Carg11152-RA	mRNA