Carg11105 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11105
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Flap endonuclease GEN-like 1
Location	Carg_Chr08: 5468770 .. 5473648 (-)
RNA-Seq Expression	Carg11105
Synteny	Carg11105

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGAAGTTTCTGCTCACACACGGTGGAAGATGAACCTCTTCTTCTCAAAGTATCAATCGATTTCTACAACGAAGAACTGCAAGTTTTTATTGGTTTCATGAACCCGTTTCTGAATCACTCGAAGAAATGGGAGTTGGAGGCAATTTCTGGGATTTACTGAAACCTCATGCTCGAACTGAGGGCTTCGATTTCCTTAGGAACAAACGGGTCGCCGTCGACCTCTCTTTCTGGATCGTCCAGCACGAGACCGCCATTAAAGCCAGTGTTCGAAGCCCTCATTTGAGGCTCACATTCTTCCGCACCATCACTCTCTTTGCTAAGGTTTTGTTTCTTTGGGTGCAAGAAGTCGGCGATGAAATTGTTTTTGCCGTTTTGGGCGTTGATGTTTTGGGCGTTGGAATTTGAGGGTTTTGTGAAGTGTTTATGCGTAGTTTAGTAACATGAATGAATTTGAAGAGAATTTGGGAATTCCTTTGGTTGTAGTTCTTCTGGTTTAAGATCCTTATGATTCTCTTACTCTTCTTATGTTGATAGTGATTTTGTTGTGTATTTTTTGCAGTTTGGTGCGTTTCCTGTGTTTGTAATTGATGGAACTCCTTCACCCTTGAAATCCAAGGCAAGGATAGCAAGATTTTTTCGGCTATCTGGTATTGATACTCATGATCTGCCAAGGGTTGAAGATCGCATTTCAGTTGACAGGAATAGCAAGTTTGCAAAATGCGTTAAAGAATGTGTGGTAGGCTGTTTCACTTGCTTTCATGTTCTCATCATATATATGTTCATCAATTTAGACTCCAAATAGTATGGTTTTGTGCATCCGCTCGAAGGGCTTGGGATGTTTCGAGATACCCTCCGACGTCCTAGTTCAAGCCTTGAGATGAAAATAGCAAAAAGATTTACAATTCTTGTTATTATCTCTCGGAGTTGACCTTGGATGTGTTTAATCTCATGAAGATTAATGCAAGAAATGGTTGATTATAGGAAAGAATGTTGAGGAGTATTGAAAGGAGTAGTCCCACGTTGACTAATTAAGAGGAAGATCATGGGTTTATACTATCTCCATTGGGATGAGGCCTTTTGAGAGCTTATGCTCAAAGTAGACAATATCATACCATTGTGGAAGTTTATAATTCGTAACAAAGAAATGGTGTTTTGTGCTTCTTGGGTTTTTGTTATTGAACTCCATAATGTATAGTCTCTTCATTGTTAGTGTATATTGTTAGGTATCACAAACCTCTATAATAGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTTGGTTTTTCCAAGAGGTCTCATACCAACGGAGATGTATTCCTTACCTACAAACCCACAATCAACCCCTTGATTAGGCAATGTGGGACACCTCTCCCAACAATCCTCAACATACACGAGTTTCGTCTCTGCATTCCCTCGACTTTTGGGTTAATTTGTGTGCCATCCTTTCTTATTGTGTTACTCCCTGAATATCTGTGATGCTTTTGTTTGATTTGGTGGACCTGCAATGCTCATCATGGCTTACTAATAGTTTTTTGTTCATAGGAACTGCTTGAGCTATTTGGGGTGCCCGTCTTAGAAGCGAAAGGAGAAGCCGAAGCTCTGTGTGCCGAGTTGAATAGAAAAGGATTTGTGGATGCCTGCATCACAGCTGACAGTGATGCTTTTCTGTTTGGCGCCAAATGTGTCATTAAAAGCTTCCATCCCAATTCAAAAGCATGTATTCTTATCTATACTTGTCTTCTTTTATAAGTAGCTTCTTCTTACCATTTTCTCTTGAATATCATAGGAACCACTTGAATGCTACTTCATGTCAGATATTGAAGCTGCTCTTGGGTTAAAAAGGAAACACTTGATAGCTATATCTCTCCTGGTTGGAAATGACCACGACTTAAATGGCGTGCAAGGAGTTGGACTGGATACCGCTGTTCGTTTCGTACAAGATTATACCGATGATGACATTTTAAACAAGTAATATTTAGCTTGCATTTTTTTTTTCGAAGTACCTATAAGGATATTTTATGATTTTTATTCGGTAATTTAACCGTGTTTGGACTGCTGAGTGTTATGCAGATTGCATGAAATAGGAAAGGAAGATAATACGAGTCTTCAAGGCGGACAATCTTCGGATACGAACTCAAGAAAGGTTAAGTGTTCTCACTGTTCCTTCTGTGGTCATCCAGGCAGCAAAAGAGACCATGTTAAGATCCCTTGTGAATACTGTGATGTGAGTCATGGAAGTTGTTGCATCAAAAAACCTGATGGATTTAAATGCAATTGTTCCTCTTGTGATACGGTACCTCATCGGCACGTCTCTCTGATTGATTTTACTCTGCATTGTGGTCGGGATGAATCATATTTTTTTAGTCTTTGTGCTAACAACTACCGTTATGATGTAAAATGTGAGATCCCATATCGGTTGGAGAAGGGAACAAGACATTCCTTATAAGAGTGTGGAAACCTTGGAAACCTCTCCCTAACGTACATGTTTTAAAAATCTTGAGAGGAAGCCTGAAAGGGAAAGCTCAAAGAGGACAATATCTACTAGCTGTGGGCTTGGCTATTACAAATGGTATCGAGCTAGACACCAGGTGGTGTACCAGCGAGGACGCTAGGCCCCAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGACTAGAGTGAAACATTCTTTATAAGGGCGTGGAAACCGATCCCTAACAAACGCGTTTTAAAAACCTTGAGGGAAAGCTCGAAAGGGAAAGCCTAAAAAAGACAATATGTGCCAGTGGTGGGCTTGAATTGTTACAAATGGTATCAGAGCCAGATACCAAGCGGTGTGCCAGTGAGGATGCTGGGCCCCCAAGGGGGGGTGGATTGTGAGATCCCACATCAGTTAGAGAAGGTAACGAAACATTTCTTATAAGGGTGTGAAAACCTTGTAAACCTCTCCCTAACAAACGTATTTTAAAAACCTTGAGGGGAAGTTCGAAAGAGAAAGTCTAAAGAGGACAATATCTGCTAATGGTGGACTTGGGCTATTACAAATGGTATCAGAGCCACACACCGTACAGTGTGCCGGCGAGGATGCTGGGCCCTCAAGTAGGGTGGATTGTGAGATCCCACATCGATTGGAGAAGAGAATGAAACATTTCTTATAAGGGTGTGGAAACCTTAGAAACCTCCCCGTAACAGACTCGTTTTAAAAACCTTAAGGGGATCTGTTAGCTGTGGGCTTGGACTTGAGTTGTTACGTAAAAGCTTATGCTTTATTTGCTTCCTTTACTTAGCAACACGTGTATTGGTTTTTGTGCCATATTGTCTAAAAGACATTTTTTCGGTTCACGATTAACAGGATCGAGAAGAGAAGGAGAAAAAGAAGCAAGAAAATTGGCGACTACGAGTTTGCAACAAGATTGCTATGGAGCCCAACTTTCCCAGTAGTGAACTTCTTCAAATGTATCTGTGTGACAATCATAGTTATTTTAGTGGTATGAGTTTAAGTGTTTGCTTTTTGATCATCTTTTAGCATGTGTCTAAGATTTTCTTGAATAAACTTATGAACATATTAGATTCTTATTTCTTTCTCTTTCTAATGCAGATGATGACCTTATCTTATCTTGGGAAAGCCCGAAAACTGAAATTCTGATTGATTTTTTAGTTTTTCATTTACGGTGGGAGCCATCTTACATTCGTCAGAGGTTGCTTCCCATGCTATCCACCATTTTTCTCAGAGAAATGGCTAATAATCCAATTCAAACTTTGTTATACGACCAGTACGAGTTCGATTCTATACTTAGAGAAAAAATAAGATATGGACATCCATTTTATGTCGTCAAATGGAAAAGGGCCATCCCGGTGCTCGACAATGTTGTATACGAAGGCTCTTCGGAGGGACTCGGCACTGGGCCAGAAGATGCCATTGATGTCGATGAACCAGTGGATCCAACAGATGAATCTGATTCACCCAAAATTCATATTCAAGAAGGGTGCTCGTTTCTATTGACCGATGAGAATATGGACCTTGTTCGAGCTGCTTATCCCGAACAAACTGCTAAGTTTTTGCAGGAAAAGGTAATCATCATCATTTTTGTTTTTGTGTTCCCTGTCTTGTTCTTGTGTTGTAATGCTGTGTTTTTGATCTGCTATACCATTGAAGTTGGAATGGCTGAGCTCTAAAGACTTAGTTTCTTGTGTTTGTTTGTGATCTATCTGATGGATATCTTAAGCTGCAATGAATATTTTCATTTATGTTTGAAAATGTCTTGGAATTAAAGGAAGTGAAAAGGCAGAAGACACCAACCACGACGCCACCTAGCGAGGCTAGCGGAAAGTCCGATTCATTAAAAGCGAAAGGTGCCCAGTTAAGTATTACTGAGTTCTACCGTGCAACGAAAACACAACAACAAACAGCAGAGACAACAGATTTGACGAATGAGGGTGAGGAGACGAGTACGGAGAAGAGGAAAGCATCAAGTTCTTCTTCGACACTTTCGAAGTCGGTAAGGCGTCGCCTTTTGTTCGACTAGAACTCAGTTAAGTATAGAGCTCTACCGTGCAGCGAAAACACAACAACAAACAACAGAGGCAACAGATTTGACAAATGAGGACGAGGAGACGAGCACGGAAACGAGGAAAAAGCATATCAAGCTCTTCCACACTTTCGTGGTCGGTAAGGCGTCGACTTTTGTTTGAGTAGAACTGTTGAAGGAGATGTTGTGCTTCCTGTCTGTTGATGAAGTGCAAATGCTACAGTTTAGAATGTGTATAGTTTGAGCTTTCATTGGTGCTTGAAATGCTGTAATTAGTCCCTATAATTGGATTAAATATTTCCTATTGTTATTGACATTAGTATTAATTTACCCTTAACTTATAAGTATATCGG

mRNA sequence

AATTGAAGTTTCTGCTCACACACGGTGGAAGATGAACCTCTTCTTCTCAAAGTATCAATCGATTTCTACAACGAAGAACTGCAAGTTTTTATTGGTTTCATGAACCCGTTTCTGAATCACTCGAAGAAATGGGAGTTGGAGGCAATTTCTGGGATTTACTGAAACCTCATGCTCGAACTGAGGGCTTCGATTTCCTTAGGAACAAACGGGTCGCCGTCGACCTCTCTTTCTGGATCGTCCAGCACGAGACCGCCATTAAAGCCAGTGTTCGAAGCCCTCATTTGAGGCTCACATTCTTCCGCACCATCACTCTCTTTGCTAAGTTTGGTGCGTTTCCTGTGTTTGTAATTGATGGAACTCCTTCACCCTTGAAATCCAAGGCAAGGATAGCAAGATTTTTTCGGCTATCTGGTATTGATACTCATGATCTGCCAAGGGTTGAAGATCGCATTTCAGTTGACAGGAATAGCAAGTTTGCAAAATGCGTTAAAGAATGTGTGGAACTGCTTGAGCTATTTGGGGTGCCCGTCTTAGAAGCGAAAGGAGAAGCCGAAGCTCTGTGTGCCGAGTTGAATAGAAAAGGATTTGTGGATGCCTGCATCACAGCTGACAGTGATGCTTTTCTGTTTGGCGCCAAATGTGTCATTAAAAGCTTCCATCCCAATTCAAAAGCATATATTGAAGCTGCTCTTGGGTTAAAAAGGAAACACTTGATAGCTATATCTCTCCTGGTTGGAAATGACCACGACTTAAATGGCGTGCAAGGAGTTGGACTGGATACCGCTGTTCGTTTCGTACAAGATTATACCGATGATGACATTTTAAACAAATTGCATGAAATAGGAAAGGAAGATAATACGAGTCTTCAAGGCGGACAATCTTCGGATACGAACTCAAGAAAGGTTAAGTGTTCTCACTGTTCCTTCTGTGGTCATCCAGGCAGCAAAAGAGACCATGTTAAGATCCCTTGTGAATACTGTGATGTGAGTCATGGAAGTTGTTGCATCAAAAAACCTGATGGATTTAAATGCAATTGTTCCTCTTGTGATACGGATCGAGAAGAGAAGGAGAAAAAGAAGCAAGAAAATTGGCGACTACGAGTTTGCAACAAGATTGCTATGGAGCCCAACTTTCCCAGTAGTGAACTTCTTCAAATGTATCTGTGTGACAATCATAGTTATTTTAGTGATGATGACCTTATCTTATCTTGGGAAAGCCCGAAAACTGAAATTCTGATTGATTTTTTAGTTTTTCATTTACGGTGGGAGCCATCTTACATTCGTCAGAGGTTGCTTCCCATGCTATCCACCATTTTTCTCAGAGAAATGGCTAATAATCCAATTCAAACTTTGTTATACGACCAGTACGAGTTCGATTCTATACTTAGAGAAAAAATAAGATATGGACATCCATTTTATGTCGTCAAATGGAAAAGGGCCATCCCGGTGCTCGACAATGTTGTATACGAAGGCTCTTCGGAGGGACTCGGCACTGGGCCAGAAGATGCCATTGATGTCGATGAACCAGTGGATCCAACAGATGAATCTGATTCACCCAAAATTCATATTCAAGAAGGGTGCTCGTTTCTATTGACCGATGAGAATATGGACCTTGTTCGAGCTGCTTATCCCGAACAAACTGCTAAGTTTTTGCAGGAAAAGGAAGTGAAAAGGCAGAAGACACCAACCACGACGCCACCTAGCGAGGCTAGCGGAAAGTCCGATTCATTAAAAGCGAAAGGTGCCCAGTTAAGTATTACTGAGTTCTACCGTGCAACGAAAACACAACAACAAACAGCAGAGACAACAGATTTGACGAATGAGGGTGAGGAGACGAGTACGGAGAAGAGGAAAGCATCAAGTTCTTCTTCGACACTTTCGAAGTCGGTAAGGCGTCGCCTTTTGTTCGACTAGAACTCAGTTAAGTATAGAGCTCTACCGTGCAGCGAAAACACAACAACAAACAACAGAGGCAACAGATTTGACAAATGAGGACGAGGAGACGAGCACGGAAACGAGGAAAAAGCATATCAAGCTCTTCCACACTTTCGTGGTCGGTAAGGCGTCGACTTTTGTTTGAGTAGAACTGTTGAAGGAGATGTTGTGCTTCCTGTCTGTTGATGAAGTGCAAATGCTACAGTTTAGAATGTGTATAGTTTGAGCTTTCATTGGTGCTTGAAATGCTGTAATTAGTCCCTATAATTGGATTAAATATTTCCTATTGTTATTGACATTAGTATTAATTTACCCTTAACTTATAAGTATATCGG

Coding sequence (CDS)

ATGGGAGTTGGAGGCAATTTCTGGGATTTACTGAAACCTCATGCTCGAACTGAGGGCTTCGATTTCCTTAGGAACAAACGGGTCGCCGTCGACCTCTCTTTCTGGATCGTCCAGCACGAGACCGCCATTAAAGCCAGTGTTCGAAGCCCTCATTTGAGGCTCACATTCTTCCGCACCATCACTCTCTTTGCTAAGTTTGGTGCGTTTCCTGTGTTTGTAATTGATGGAACTCCTTCACCCTTGAAATCCAAGGCAAGGATAGCAAGATTTTTTCGGCTATCTGGTATTGATACTCATGATCTGCCAAGGGTTGAAGATCGCATTTCAGTTGACAGGAATAGCAAGTTTGCAAAATGCGTTAAAGAATGTGTGGAACTGCTTGAGCTATTTGGGGTGCCCGTCTTAGAAGCGAAAGGAGAAGCCGAAGCTCTGTGTGCCGAGTTGAATAGAAAAGGATTTGTGGATGCCTGCATCACAGCTGACAGTGATGCTTTTCTGTTTGGCGCCAAATGTGTCATTAAAAGCTTCCATCCCAATTCAAAAGCATATATTGAAGCTGCTCTTGGGTTAAAAAGGAAACACTTGATAGCTATATCTCTCCTGGTTGGAAATGACCACGACTTAAATGGCGTGCAAGGAGTTGGACTGGATACCGCTGTTCGTTTCGTACAAGATTATACCGATGATGACATTTTAAACAAATTGCATGAAATAGGAAAGGAAGATAATACGAGTCTTCAAGGCGGACAATCTTCGGATACGAACTCAAGAAAGGTTAAGTGTTCTCACTGTTCCTTCTGTGGTCATCCAGGCAGCAAAAGAGACCATGTTAAGATCCCTTGTGAATACTGTGATGTGAGTCATGGAAGTTGTTGCATCAAAAAACCTGATGGATTTAAATGCAATTGTTCCTCTTGTGATACGGATCGAGAAGAGAAGGAGAAAAAGAAGCAAGAAAATTGGCGACTACGAGTTTGCAACAAGATTGCTATGGAGCCCAACTTTCCCAGTAGTGAACTTCTTCAAATGTATCTGTGTGACAATCATAGTTATTTTAGTGATGATGACCTTATCTTATCTTGGGAAAGCCCGAAAACTGAAATTCTGATTGATTTTTTAGTTTTTCATTTACGGTGGGAGCCATCTTACATTCGTCAGAGGTTGCTTCCCATGCTATCCACCATTTTTCTCAGAGAAATGGCTAATAATCCAATTCAAACTTTGTTATACGACCAGTACGAGTTCGATTCTATACTTAGAGAAAAAATAAGATATGGACATCCATTTTATGTCGTCAAATGGAAAAGGGCCATCCCGGTGCTCGACAATGTTGTATACGAAGGCTCTTCGGAGGGACTCGGCACTGGGCCAGAAGATGCCATTGATGTCGATGAACCAGTGGATCCAACAGATGAATCTGATTCACCCAAAATTCATATTCAAGAAGGGTGCTCGTTTCTATTGACCGATGAGAATATGGACCTTGTTCGAGCTGCTTATCCCGAACAAACTGCTAAGTTTTTGCAGGAAAAGGAAGTGAAAAGGCAGAAGACACCAACCACGACGCCACCTAGCGAGGCTAGCGGAAAGTCCGATTCATTAAAAGCGAAAGGTGCCCAGTTAAGTATTACTGAGTTCTACCGTGCAACGAAAACACAACAACAAACAGCAGAGACAACAGATTTGACGAATGAGGGTGAGGAGACGAGTACGGAGAAGAGGAAAGCATCAAGTTCTTCTTCGACACTTTCGAAGTCGGTAAGGCGTCGCCTTTTGTTCGACTAG

Protein sequence

MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTITLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCVKECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNSKAYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDILNKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYFSDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQYEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDESDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSDSLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLLFD

Homology

[Close]

BLAST of Carg11105 vs. NCBI nr
Match: KAG7026031.1 (Flap endonuclease GEN-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1192.6 bits (3084), Expect = 0.0e+00
Identity = 594/594 (100.00%), Postives = 594/594 (100.00%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
           TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV
Sbjct: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180

Query: 181 KAYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDILNKLHEIGK 240
           KAYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDILNKLHEIGK
Sbjct: 181 KAYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDILNKLHEIGK 240

Query: 241 EDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCCIKKPDGFK 300
           EDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCCIKKPDGFK
Sbjct: 241 EDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCCIKKPDGFK 300

Query: 301 CNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYFSDDDLILS 360
           CNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYFSDDDLILS
Sbjct: 301 CNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYFSDDDLILS 360

Query: 361 WESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQYEFDSILR 420
           WESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQYEFDSILR
Sbjct: 361 WESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQYEFDSILR 420

Query: 421 EKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDESDSPKIHI 480
           EKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDESDSPKIHI
Sbjct: 421 EKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDESDSPKIHI 480

Query: 481 QEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSDSLKAKGAQ 540
           QEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSDSLKAKGAQ
Sbjct: 481 QEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSDSLKAKGAQ 540

Query: 541 LSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLLFD 595
           LSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLLFD
Sbjct: 541 LSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLLFD 594

[Close]

BLAST of Carg11105 vs. NCBI nr
Match: KAG6593691.1 (Flap endonuclease GEN-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1177.5 bits (3045), Expect = 0.0e+00
Identity = 589/602 (97.84%), Postives = 592/602 (98.34%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
           TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRN KFAKCV
Sbjct: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNGKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           K        + IEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL
Sbjct: 181 KEPLECYFMSDIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240

Query: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC 300
           NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC
Sbjct: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC 300

Query: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYF 360
           IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSEL+QMYLCDNHSYF
Sbjct: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELIQMYLCDNHSYF 360

Query: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420
           SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ
Sbjct: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420

Query: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDE 480
           YEFDSILREKIRYGHPFYV+KWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDE
Sbjct: 421 YEFDSILREKIRYGHPFYVIKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDE 480

Query: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540
           SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD
Sbjct: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540

Query: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 595
           SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL
Sbjct: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 600

[Close]

BLAST of Carg11105 vs. NCBI nr
Match: XP_022964472.1 (flap endonuclease GEN-like 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 589/602 (97.84%), Postives = 591/602 (98.17%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
           TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV
Sbjct: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           K        + IEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL
Sbjct: 181 KEPLECYFMSDIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240

Query: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC 300
           NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC
Sbjct: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC 300

Query: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYF 360
           IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSEL+QMYLCDNHSYF
Sbjct: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELIQMYLCDNHSYF 360

Query: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420
           SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ
Sbjct: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420

Query: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDE 480
           YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVD TDE
Sbjct: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDLTDE 480

Query: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540
           SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSE SGKSD
Sbjct: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSETSGKSD 540

Query: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 595
           SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL
Sbjct: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 600

[Close]

BLAST of Carg11105 vs. NCBI nr
Match: XP_023513684.1 (flap endonuclease GEN-like 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1171.4 bits (3029), Expect = 0.0e+00
Identity = 588/602 (97.67%), Postives = 590/602 (98.01%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
           TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV
Sbjct: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           K        + IEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL
Sbjct: 181 KEPLECYFMSDIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240

Query: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC 300
           NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVK PCEYCDVSHGSCC
Sbjct: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKFPCEYCDVSHGSCC 300

Query: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYF 360
           IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSEL+QMYLCDNHSYF
Sbjct: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELIQMYLCDNHSYF 360

Query: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420
           SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ
Sbjct: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420

Query: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDE 480
           YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEG GTGPEDAIDVDEPVD TDE
Sbjct: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGHGTGPEDAIDVDEPVDLTDE 480

Query: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540
           SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD
Sbjct: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540

Query: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 595
           SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL
Sbjct: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 600

[Close]

BLAST of Carg11105 vs. NCBI nr
Match: XP_022999822.1 (flap endonuclease GEN-like 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 581/602 (96.51%), Postives = 586/602 (97.34%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
           TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV
Sbjct: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           K        + IEAALGLKRKHLIAISLLVGNDHDLNG+QGVGLDTAVRFVQDYT+DDIL
Sbjct: 181 KEPLECYFMSDIEAALGLKRKHLIAISLLVGNDHDLNGMQGVGLDTAVRFVQDYTEDDIL 240

Query: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC 300
           NKLH IGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVK PCEYCDVSHGSCC
Sbjct: 241 NKLHVIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKFPCEYCDVSHGSCC 300

Query: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYF 360
           IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSEL+QMYLCDNHSYF
Sbjct: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELIQMYLCDNHSYF 360

Query: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420
           SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ
Sbjct: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420

Query: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDE 480
           YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEG SEGLGTGPEDAIDVDEPVD TDE
Sbjct: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGYSEGLGTGPEDAIDVDEPVDLTDE 480

Query: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540
            DSPKIHIQEGCSFLLTDENMDLV+AAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD
Sbjct: 481 FDSPKIHIQEGCSFLLTDENMDLVQAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540

Query: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 595
           SLKAKGAQLSITEFYRATKTQQQTAETTDL NEGEETSTEKRKA SSSSTLSKSVRRRLL
Sbjct: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLPNEGEETSTEKRKA-SSSSTLSKSVRRRLL 600

[Close]

BLAST of Carg11105 vs. ExPASy Swiss-Prot
Match: Q9LPD2 (Flap endonuclease GEN-like 1 OS=Arabidopsis thaliana OX=3702 GN=GEN1 PE=1 SV=3)

HSP 1 Score: 597.0 bits (1538), Expect = 2.3e-169
Identity = 321/613 (52.37%), Postives = 429/613 (69.98%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLL+P+A+ +GFDFLRNKRVAVDLSFWIVQHETA+K  V  PHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
            LF+KFGA+PVFV+DGTPSPLKS+ARI+RFFR SGIDT +LP ++D +SV+RN  F++ V
Sbjct: 61  NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFSEWV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           +ECVELLEL G+PVL+A GEAEALCA+LN +GFVDACIT DSDAFLFGA CVIK   PNS
Sbjct: 121 RECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDIKPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           +        ++IE+ LGLKRKHLIAISLLVGND+D  GV G+G+D A+R V+++++D +L
Sbjct: 181 REPFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSEDQVL 240

Query: 241 NKLHEIGKEDNTSLQGGQSSDTNSR------KVKCSHCSFCGHPGSKRDHVKIPCEYCDV 300
            +L +IG     ++ GG  S  +        K +  HCS CGH GSKR H K  CE+C  
Sbjct: 241 ERLQDIGNGLQPAVPGGIKSGDDGEEFRSEMKKRSPHCSRCGHLGSKRTHFKSSCEHCGC 300

Query: 301 SHGSCCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLC 360
             G  CIKKP GF+C CS C  DR+ +E+KK  +W ++VC+KIA+ P FP+ +++++YL 
Sbjct: 301 DSG--CIKKPLGFRCECSFCSKDRDLREQKKTNDWWIKVCDKIALAPEFPNRKIIELYLS 360

Query: 361 DNHSYFSDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMA-NNPI 420
           D     + D   +SW +P T +L+D +VF L W+PSY+R+ LLPMLSTI+LRE A NN  
Sbjct: 361 D--GLMTGDGSSMSWGTPDTGMLVDLMVFKLHWDPSYVRKMLLPMLSTIYLREKARNNTG 420

Query: 421 QTLLYDQYEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDV-- 480
             LL DQYEF SI   K RYGH  +V++W++  P   +      SE     PE++I V  
Sbjct: 421 YALLCDQYEFHSIKCIKTRYGHQSFVIRWRK--PKSTSGYSHSHSE-----PEESIVVLE 480

Query: 481 --DEPVDPTDESDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTT 540
             +E VDP D  + P++    G  FLLTDE + LV++A+P++T  FL EK+++  K    
Sbjct: 481 EEEESVDPLDGLNEPQVQNDNGDCFLLTDECIGLVQSAFPDETEHFLHEKKLRESKKKNV 540

Query: 541 TPPSEASGKSDSLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKA-SSSS 594
           +    A+ ++ ++   G Q SIT+FYR+ K +    ++ +     + ++ +KR+A S+SS
Sbjct: 541 SEEETATPRATTM---GVQRSITDFYRSAK-KAAAGQSIETGGSSKASAEKKRQATSTSS 598

[Close]

BLAST of Carg11105 vs. ExPASy Swiss-Prot
Match: Q64MA3 (Flap endonuclease GEN-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD PE=1 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 1.3e-153
Identity = 305/638 (47.81%), Postives = 405/638 (63.48%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKA---SVRSPHLRLTFF 60
           MGVGG+FWDLLKP+AR EG  +LR +RVAVDLSFW+V H  AI+A     R PHLR  FF
Sbjct: 1   MGVGGSFWDLLKPYARHEGAGYLRGRRVAVDLSFWVVSHSAAIRARSPHARLPHLRTLFF 60

Query: 61  RTITLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVD-----R 120
           RT++LF+K GAFPVFV+DG PSPLKS+ R ARFFR SG+D   LP  E   S D     R
Sbjct: 61  RTLSLFSKMGAFPVFVVDGQPSPLKSQVRAARFFRGSGMDLAALPSTEAEASADALVQPR 120

Query: 121 NSKFAKCVKECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCV 180
           N+KF + V++CVELLE  G+PVL AKGE EALCA+LN +G VDACIT+DSDAFLFGAK V
Sbjct: 121 NAKFTRYVEDCVELLEYLGMPVLRAKGEGEALCAQLNNQGHVDACITSDSDAFLFGAKTV 180

Query: 181 IKSFHPNSK--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQ 240
           IK    N K        A IE+ LGLKRK ++A++LLVG+DHDL+GV G G +TA+RFVQ
Sbjct: 181 IKVLRSNCKEPFECYNMADIESGLGLKRKQMVAMALLVGSDHDLHGVPGFGPETALRFVQ 240

Query: 241 DYTDDDILNKLHEIGK-------EDNTSLQGGQSSDTNS-RKVKCSHCSFCGHPGSKRDH 300
            + +D++L KL+EIGK           ++    S  T S  + +  HCS CGHPG+K++H
Sbjct: 241 LFDEDNVLAKLYEIGKGVYPFIGVSAPNIDDLPSPSTKSLPRARSPHCSHCGHPGNKKNH 300

Query: 301 VKIPCEYCDVSHGSCCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFP 360
           +K  C +C V     C++KP GF C C SCD  R+ K +++ ENW+++VC +IA E NFP
Sbjct: 301 IKDGCNFCLVDSLENCVEKPAGFICECPSCDKARDLKVQRRNENWQIKVCKRIAAETNFP 360

Query: 361 SSELLQMYLCDNHSYFSDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIF 420
           + E++ +YL D++    +   +L+W  P  EIL+DFL F   WEP+YIRQR+LPMLSTI+
Sbjct: 361 NEEIINLYLNDDNLDNENGVPLLTWNKPDMEILVDFLSFKQNWEPAYIRQRMLPMLSTIY 420

Query: 421 LREMANNPIQT-LLYDQYEFDSILREKIRYGHPFYVVKWKRAIPVL-------------- 480
           LREMA++  ++ LLYDQY+F SI R KIRYGHP+Y+VKWKR    +              
Sbjct: 421 LREMASSQSKSFLLYDQYKFHSIQRIKIRYGHPYYLVKWKRVTRSMISNDPPSKQTELEG 480

Query: 481 --DNV-VYEGSSEGLGTGPEDAIDVDEPVDPTDESDSPKIHIQEGCSFLLTDENMDLVRA 540
             D V V +G  E +    E+   + E  +  DE D P++   +   FLLTDE+++LV A
Sbjct: 481 KNDKVEVLDGDDEVVDEEEEEPTMISETTELLDEPDVPQVLDDDKDCFLLTDEDIELVNA 540

Query: 541 AYPEQTAKFLQEKEVKRQKTPTTTPPSEASG--KSDSLKAKGAQLSITEFYRATKTQQQT 595
           A+P++  +F +E+ +K  K+         +G       +  G QLSI EFYR+ K     
Sbjct: 541 AFPDEAQRFQEEQRLKEAKSIARKSKLNVAGFETPKGPRPSGVQLSIKEFYRSKK----- 600

[Close]

BLAST of Carg11105 vs. ExPASy Swiss-Prot
Match: Q8BMI4 (Flap endonuclease GEN homolog 1 OS=Mus musculus OX=10090 GN=Gen1 PE=1 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 1.6e-45
Identity = 151/548 (27.55%), Postives = 247/548 (45.07%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIK--ASVRSPHLRLTFFR 60
           MGV  + W +L+P  +      L  K +AVDLS W+ + +T  K   +V+ PHLR  FFR
Sbjct: 1   MGV-NDLWQILEPVKQHIHLQDLSGKTIAVDLSLWVCEAQTVKKMIGTVKKPHLRNLFFR 60

Query: 61  TITLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAK 120
            I+   +     VFV++G P  LK+     R        T   P  + R      S F  
Sbjct: 61  -ISYLTQMNVKLVFVMEGEPPMLKADVISKR------TQTRYGPSGKSRSQKTGRSHFKS 120

Query: 121 CVKECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHP 180
            ++EC+E+LE  G+P ++A GEAEA+CA LN  G VD C+T D DAFL+GA+ V ++F  
Sbjct: 121 VLRECLEMLECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQTVYRNFTM 180

Query: 181 NSK---------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDD 240
           N+K         + I++ LGL R  L+ +++L+G D+   GV GVG + A++ +Q +   
Sbjct: 181 NTKDPHVDCYTISSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQALKLLQIFKGQ 240

Query: 241 DILNKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHG 300
            +L +        N  ++    S   S   K  HCS C HPGS +DH +  C  C     
Sbjct: 241 SLLQRF-------NQWIEDPCYSVPQSAPKKVVHCSVCSHPGSPKDHERNGCILC--KSD 300

Query: 301 SCCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNH 360
             C      + C C    TD      + + N + + C+       FP  E++Q +L + +
Sbjct: 301 KYCEPHDYDYLCPCEWHQTDHNRHLSEIENNIKKKACSC----EGFPFHEVIQEFLLNKN 360

Query: 361 SYFSDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLL 420
                    ++++ P   +   F V  + W   Y  ++LL +L+   + E  +    +  
Sbjct: 361 KMLKP----ITYQRPDLLLFQRFTVQKMEWPSHYACEKLLVLLTRYDMIERKHGRKTS-- 420

Query: 421 YDQYEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDP 480
            +Q +   I++ ++R G     ++W++                    PE  +        
Sbjct: 421 -NQLQPIRIVKPRVRNGVHCLEIEWEK--------------------PEHYV-------- 480

Query: 481 TDESDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTA---KFLQEKEVKRQKTPTTTPPSE 535
            ++ D  K+        LLT E   L  AAYP+  A   K L E + ++QK+    P   
Sbjct: 481 VEDGDPGKLS-------LLTMEEASLFEAAYPDAVAVYQKQLSETKGRKQKSMKNKPKGS 485

[Close]

BLAST of Carg11105 vs. ExPASy Swiss-Prot
Match: Q17RS7 (Flap endonuclease GEN homolog 1 OS=Homo sapiens OX=9606 GN=GEN1 PE=1 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 1.6e-42
Identity = 150/555 (27.03%), Postives = 248/555 (44.68%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIK--ASVRSPHLRLTFFR 60
           MGV  + W +L+P  +      L  K +AVDLS W+ + +T  K   SV  PHLR  FFR
Sbjct: 1   MGV-NDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFR 60

Query: 61  TITLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAK 120
            I+   +     VFV++G P  LK+     R     G       +   R      S F  
Sbjct: 61  -ISYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGR------SHFKS 120

Query: 121 CVKECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHP 180
            ++EC+ +LE  G+P ++A GEAEA+CA LN  G VD C+T D D FL+GA+ V ++F  
Sbjct: 121 VLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTM 180

Query: 181 NSK---------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDD 240
           N+K         + I++ LGL R  L+ +++L+G D+   GV GVG + A++ +Q     
Sbjct: 181 NTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQ 240

Query: 241 DILNKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHG 300
            +L + +   + + TS     SS       K +HCS C HPGS +DH +  C  C     
Sbjct: 241 SLLQRFN---RWNETSC---NSSPQLLVTKKLAHCSVCSHPGSPKDHERNGCRLC--KSD 300

Query: 301 SCCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNH 360
             C      + C C    T+ + +  + + N + + C        FP  E++Q +L +  
Sbjct: 301 KYCEPHDYEYCCPCEWHRTEHDRQLSEVENNIKKKAC----CCEGFPFHEVIQEFLLNKD 360

Query: 361 SYFSDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLL 420
                   ++ ++ P   +   F +  + W   Y  ++LL +L+     +M    + +  
Sbjct: 361 KLVK----VIRYQRPDLLLFQRFTLEKMEWPNHYACEKLLVLLTHY---DMIERKLGSRN 420

Query: 421 YDQYEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDP 480
            +Q +   I++ +IR G   + ++W++                    PE     D+    
Sbjct: 421 SNQLQPIRIVKTRIRNGVHCFEIEWEK--------------------PEHYAMEDK---- 480

Query: 481 TDESDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEK-EVKRQKTPTTTPPSEAS 540
                      Q G   LLT E   L  AAYPE  A + ++K E+K +K     P     
Sbjct: 481 -----------QHGEFALLTIEEESLFEAAYPEIVAVYQKQKLEIKGKKQKRIKPKENNL 493

Query: 541 GKSDSLKAKGAQLSI 544
            + D + +  + +++
Sbjct: 541 PEPDEVMSFQSHMTL 493

[Close]

BLAST of Carg11105 vs. ExPASy Swiss-Prot
Match: Q9VRJ0 (Flap endonuclease GEN OS=Drosophila melanogaster OX=7227 GN=Gen PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 2.3e-36
Identity = 141/541 (26.06%), Postives = 240/541 (44.36%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVR-SPHLRLTFFRT 60
           MGV    W +L PH   +  + LR K+VA+DL+ W+ +    +   V    HL+  FFRT
Sbjct: 1   MGV-KELWGVLTPHCERKPINELRGKKVAIDLAGWVCESLNVVDYFVHPRHHLKNLFFRT 60

Query: 61  ITLFAKFGAFPVFVIDGTPSPLKSKARIAR-FFRLSGIDTHDLP---RVEDRISVDRNSK 120
             L  +    PVFV++G    LKS+    R   +  G+   + P   + +        S+
Sbjct: 61  CYLIWE-QVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGRSR 120

Query: 121 FAKCVKECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKS 180
           F   +K+C  LL   G+  ++  GEAEA CA LN+ G VD  I+ DSD F +GA  V ++
Sbjct: 121 FNHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRN 180

Query: 181 FHPNSKAYIEAALG---------------LKRKHLIAISLLVGNDHDLNGVQGVGLDTAV 240
           F  +++    AA G                 ++ +I ++LL G D+  +G+ G+G D  +
Sbjct: 181 FSVSTQGAQAAAGGAVDIYDMREITSRMDFGQQKIIVMALLCGCDYCPDGIGGIGKDGVL 240

Query: 241 RFVQDYTDDDILNKLHEIGKEDNTSLQGGQSSDTNSRKVKC---SHCSFCGHPGSKRDHV 300
           +    Y + +IL+++             G++   N+ +++    S CS CGH G  + H 
Sbjct: 241 KLFNKYKETEILDRMRS---------WRGETDKYNALEIRVDDKSICSNCGHIGKTQSHT 300

Query: 301 KIPCEYCDVSHGSCCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPS 360
           K  C  C    G                CD +   KE++      L +  K  + P+FP+
Sbjct: 301 KSGCSVCRTHKG----------------CD-ESLWKEQRLSIKSELTLRRKALLSPDFPN 360

Query: 361 SELLQMYLCDNHSYFSDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFL 420
            E++  +L +  +     +L L+W  P     I  +   L+W   Y  Q+  P+L+    
Sbjct: 361 EEIIAEFLSEPDTI---PNLNLNWRQPNLVKFIKQIGHLLQWPEIYCFQKFFPILTR--- 420

Query: 421 REMANNPIQTLLYDQYEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGP 480
            ++  +  + +L   +E   I++++   G P   ++W           ++ S    G  P
Sbjct: 421 WQVQQSKQEKILIQPHE---IIKKRTVKGVPSLELRW-----------HDPSGIFKGLIP 480

Query: 481 EDAIDVDEPVDPTDESDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQK 519
           +  I          E++ PK  I+E      T E +D++  AYP+  A FL+ KE   +K
Sbjct: 481 DKQI-------AEYEAEHPK-GIEE---LYYTIEPLDMLETAYPDLVAAFLKSKEKPAKK 482

[Close]

BLAST of Carg11105 vs. ExPASy TrEMBL
Match: A0A6J1HHW8 (flap endonuclease GEN-like 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464485 PE=4 SV=1)

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 589/602 (97.84%), Postives = 591/602 (98.17%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
           TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV
Sbjct: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           K        + IEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL
Sbjct: 181 KEPLECYFMSDIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240

Query: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC 300
           NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC
Sbjct: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC 300

Query: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYF 360
           IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSEL+QMYLCDNHSYF
Sbjct: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELIQMYLCDNHSYF 360

Query: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420
           SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ
Sbjct: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420

Query: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDE 480
           YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVD TDE
Sbjct: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDLTDE 480

Query: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540
           SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSE SGKSD
Sbjct: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSETSGKSD 540

Query: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 595
           SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL
Sbjct: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 600

[Close]

BLAST of Carg11105 vs. ExPASy TrEMBL
Match: A0A6J1KBV0 (flap endonuclease GEN-like 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494178 PE=4 SV=1)

HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 581/602 (96.51%), Postives = 586/602 (97.34%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
           TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV
Sbjct: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           K        + IEAALGLKRKHLIAISLLVGNDHDLNG+QGVGLDTAVRFVQDYT+DDIL
Sbjct: 181 KEPLECYFMSDIEAALGLKRKHLIAISLLVGNDHDLNGMQGVGLDTAVRFVQDYTEDDIL 240

Query: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC 300
           NKLH IGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVK PCEYCDVSHGSCC
Sbjct: 241 NKLHVIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKFPCEYCDVSHGSCC 300

Query: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYF 360
           IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSEL+QMYLCDNHSYF
Sbjct: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELIQMYLCDNHSYF 360

Query: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420
           SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ
Sbjct: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420

Query: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDE 480
           YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEG SEGLGTGPEDAIDVDEPVD TDE
Sbjct: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGYSEGLGTGPEDAIDVDEPVDLTDE 480

Query: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540
            DSPKIHIQEGCSFLLTDENMDLV+AAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD
Sbjct: 481 FDSPKIHIQEGCSFLLTDENMDLVQAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540

Query: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 595
           SLKAKGAQLSITEFYRATKTQQQTAETTDL NEGEETSTEKRKA SSSSTLSKSVRRRLL
Sbjct: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLPNEGEETSTEKRKA-SSSSTLSKSVRRRLL 600

[Close]

BLAST of Carg11105 vs. ExPASy TrEMBL
Match: A0A6J1HKX7 (flap endonuclease GEN-like 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464485 PE=4 SV=1)

HSP 1 Score: 1034.2 bits (2673), Expect = 2.0e-298
Identity = 539/602 (89.53%), Postives = 541/602 (89.87%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
           TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV
Sbjct: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           K        + IEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL
Sbjct: 181 KEPLECYFMSDIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240

Query: 241 NKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCC 300
           NKLHEIGKEDNTSLQGGQSSDTNSRK                                  
Sbjct: 241 NKLHEIGKEDNTSLQGGQSSDTNSRK---------------------------------- 300

Query: 301 IKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYF 360
                           DREEKEKKKQENWRLRVCNKIAMEPNFPSSEL+QMYLCDNHSYF
Sbjct: 301 ----------------DREEKEKKKQENWRLRVCNKIAMEPNFPSSELIQMYLCDNHSYF 360

Query: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420
           SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ
Sbjct: 361 SDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNPIQTLLYDQ 420

Query: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDPTDE 480
           YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVD TDE
Sbjct: 421 YEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVDEPVDLTDE 480

Query: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSEASGKSD 540
           SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSE SGKSD
Sbjct: 481 SDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPPSETSGKSD 540

Query: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 595
           SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL
Sbjct: 541 SLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLSKSVRRRLL 552

[Close]

BLAST of Carg11105 vs. ExPASy TrEMBL
Match: A0A5D3DLF9 (Flap endonuclease GEN-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00140 PE=4 SV=1)

HSP 1 Score: 1026.5 bits (2653), Expect = 4.3e-296
Identity = 520/610 (85.25%), Postives = 551/610 (90.33%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGG+FWDLLKP+ARTEGFDFLRNKRVAVDLSFWIVQHETAIK++ RSPHLRLTFFRTI
Sbjct: 1   MGVGGHFWDLLKPNARTEGFDFLRNKRVAVDLSFWIVQHETAIKSTSRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
           TLFAKFGAFPVFV+DGTPSPLKSKARIARFFRLSGIDT DLP+VEDRISV RN KFAKCV
Sbjct: 61  TLFAKFGAFPVFVVDGTPSPLKSKARIARFFRLSGIDTSDLPKVEDRISVHRNRKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELN+KGFVDACITADSDAFLFGAKCVIKS HPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNQKGFVDACITADSDAFLFGAKCVIKSIHPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           K        + IEAALGL R HLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDD IL
Sbjct: 181 KEPLECYFMSDIEAALGLNRNHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDQIL 240

Query: 241 NKLHEIGKEDNTSLQG--------GQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYC 300
           NKL+EIG ED T+LQ         GQSS+T+SRK+KCSHCSFCGHPGSKR HVK PCEYC
Sbjct: 241 NKLYEIGNEDTTALQSGFELVNNYGQSSETDSRKIKCSHCSFCGHPGSKRAHVKFPCEYC 300

Query: 301 DVSHGSCCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMY 360
           DVSHG  CIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSEL+QMY
Sbjct: 301 DVSHGEGCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELIQMY 360

Query: 361 LCDNHSYFSDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNP 420
            CDNHSYFSDDDL+LSW SP+TE+L+DFLVFHL+WEPSYIRQR+LPMLSTIFLREMANNP
Sbjct: 361 QCDNHSYFSDDDLVLSWGSPRTELLVDFLVFHLQWEPSYIRQRMLPMLSTIFLREMANNP 420

Query: 421 IQTLLYDQYEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVD 480
           IQTLL+ QYEFDSILREKIR+GH FYVVKWK+A+P + NV+YE S    GTGPEDAIDVD
Sbjct: 421 IQTLLFGQYEFDSILREKIRFGHSFYVVKWKKAVPAISNVMYEDSLGEFGTGPEDAIDVD 480

Query: 481 EPVDPTDESDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPP 540
           E VD TDE DSPKIHIQ+GCSFLLTDENM+LV AAYPEQ AKFLQEKE+KRQKTP +TP 
Sbjct: 481 EAVDLTDEFDSPKIHIQDGCSFLLTDENMELVGAAYPEQAAKFLQEKEMKRQKTP-STPA 540

Query: 541 SEASGKSDSLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLS 595
              SGKSDS KAKG QLSITEFYRATKTQQQTA+TTD TNE EETST KRKA SSSSTLS
Sbjct: 541 CGTSGKSDSSKAKGVQLSITEFYRATKTQQQTADTTDSTNEDEETSTGKRKA-SSSSTLS 600

[Close]

BLAST of Carg11105 vs. ExPASy TrEMBL
Match: A0A1S3CD60 (flap endonuclease GEN-like 1 OS=Cucumis melo OX=3656 GN=LOC103499055 PE=4 SV=1)

HSP 1 Score: 1025.4 bits (2650), Expect = 9.5e-296
Identity = 519/610 (85.08%), Postives = 551/610 (90.33%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGG+FWDLLKP+ARTEGFDFLRNKRVAVDLSFWIVQHETAIK++ RSPHLRLTFFRTI
Sbjct: 1   MGVGGHFWDLLKPNARTEGFDFLRNKRVAVDLSFWIVQHETAIKSTSRSPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
           TLFAKFGAFPVFV+DGTPSPLKSKARIARFFRLSGIDT DLP+VEDRISV RN KFAKCV
Sbjct: 61  TLFAKFGAFPVFVVDGTPSPLKSKARIARFFRLSGIDTSDLPKVEDRISVHRNRKFAKCV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           KECVELLELFGVPVLEAKGEAEALCAELN+KGFVDACITADSDAFLFGAKCVIKS HPNS
Sbjct: 121 KECVELLELFGVPVLEAKGEAEALCAELNQKGFVDACITADSDAFLFGAKCVIKSIHPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           K        + IEAALGL R HLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDD IL
Sbjct: 181 KEPLECYFMSDIEAALGLNRNHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDQIL 240

Query: 241 NKLHEIGKEDNTSLQG--------GQSSDTNSRKVKCSHCSFCGHPGSKRDHVKIPCEYC 300
           NKL+EIG ED T+LQ         GQSS+T+SRK+KCSHCSFCGHPGSKR HVK PCEYC
Sbjct: 241 NKLYEIGNEDTTALQSGFELVNNYGQSSETDSRKIKCSHCSFCGHPGSKRAHVKFPCEYC 300

Query: 301 DVSHGSCCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMY 360
           DVSHG  CIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSEL+QMY
Sbjct: 301 DVSHGEGCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELIQMY 360

Query: 361 LCDNHSYFSDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMANNP 420
            CDNHSYFSDDDL+LSW SP+TE+L+DFLVFHL+WEPSYIRQR+LPMLSTIFLREMANNP
Sbjct: 361 QCDNHSYFSDDDLVLSWGSPRTELLVDFLVFHLQWEPSYIRQRMLPMLSTIFLREMANNP 420

Query: 421 IQTLLYDQYEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDVD 480
           IQTLL+ QYEFDSILREKIR+GH FYVVKWK+A+P + NV+YE S    GTGPEDAIDVD
Sbjct: 421 IQTLLFGQYEFDSILREKIRFGHSFYVVKWKKAVPAISNVMYEDSLGEFGTGPEDAIDVD 480

Query: 481 EPVDPTDESDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTTTPP 540
           E VD TDE DSPKIHIQ+GCSFLLTDENM+LV AAYPEQ AKFLQEKE+KRQKTP +TP 
Sbjct: 481 EAVDLTDEFDSPKIHIQDGCSFLLTDENMELVGAAYPEQAAKFLQEKEMKRQKTP-STPA 540

Query: 541 SEASGKSDSLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKASSSSSTLS 595
              SGKSDS KAKG QLSITEFYRATKTQQQTA+TTD TNE EETST KR+A SSSSTLS
Sbjct: 541 CGTSGKSDSSKAKGVQLSITEFYRATKTQQQTADTTDSTNEDEETSTGKRRA-SSSSTLS 600

[Close]

BLAST of Carg11105 vs. TAIR 10
Match: AT1G01880.1 (5'-3' exonuclease family protein )

HSP 1 Score: 597.0 bits (1538), Expect = 1.6e-170
Identity = 321/613 (52.37%), Postives = 429/613 (69.98%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLL+P+A+ +GFDFLRNKRVAVDLSFWIVQHETA+K  V  PHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
            LF+KFGA+PVFV+DGTPSPLKS+ARI+RFFR SGIDT +LP ++D +SV+RN  F++ V
Sbjct: 61  NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFSEWV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           +ECVELLEL G+PVL+A GEAEALCA+LN +GFVDACIT DSDAFLFGA CVIK   PNS
Sbjct: 121 RECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDIKPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           +        ++IE+ LGLKRKHLIAISLLVGND+D  GV G+G+D A+R V+++++D +L
Sbjct: 181 REPFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSEDQVL 240

Query: 241 NKLHEIGKEDNTSLQGGQSSDTNSR------KVKCSHCSFCGHPGSKRDHVKIPCEYCDV 300
            +L +IG     ++ GG  S  +        K +  HCS CGH GSKR H K  CE+C  
Sbjct: 241 ERLQDIGNGLQPAVPGGIKSGDDGEEFRSEMKKRSPHCSRCGHLGSKRTHFKSSCEHCGC 300

Query: 301 SHGSCCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLC 360
             G  CIKKP GF+C CS C  DR+ +E+KK  +W ++VC+KIA+ P FP+ +++++YL 
Sbjct: 301 DSG--CIKKPLGFRCECSFCSKDRDLREQKKTNDWWIKVCDKIALAPEFPNRKIIELYLS 360

Query: 361 DNHSYFSDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMA-NNPI 420
           D     + D   +SW +P T +L+D +VF L W+PSY+R+ LLPMLSTI+LRE A NN  
Sbjct: 361 D--GLMTGDGSSMSWGTPDTGMLVDLMVFKLHWDPSYVRKMLLPMLSTIYLREKARNNTG 420

Query: 421 QTLLYDQYEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDV-- 480
             LL DQYEF SI   K RYGH  +V++W++  P   +      SE     PE++I V  
Sbjct: 421 YALLCDQYEFHSIKCIKTRYGHQSFVIRWRK--PKSTSGYSHSHSE-----PEESIVVLE 480

Query: 481 --DEPVDPTDESDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTT 540
             +E VDP D  + P++    G  FLLTDE + LV++A+P++T  FL EK+++  K    
Sbjct: 481 EEEESVDPLDGLNEPQVQNDNGDCFLLTDECIGLVQSAFPDETEHFLHEKKLRESKKKNV 540

Query: 541 TPPSEASGKSDSLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKA-SSSS 594
           +    A+ ++ ++   G Q SIT+FYR+ K +    ++ +     + ++ +KR+A S+SS
Sbjct: 541 SEEETATPRATTM---GVQRSITDFYRSAK-KAAAGQSIETGGSSKASAEKKRQATSTSS 598

[Close]

BLAST of Carg11105 vs. TAIR 10
Match: AT1G01880.2 (5'-3' exonuclease family protein )

HSP 1 Score: 590.9 bits (1522), Expect = 1.2e-168
Identity = 320/613 (52.20%), Postives = 428/613 (69.82%), Query Frame = 0


Query: 1   MGVGGNFWDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIKASVRSPHLRLTFFRTI 60
           MGVGGNFWDLL+P+A+ +GFDFLRNKRVAVDLSFWIVQHETA+K  V  PHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 61  TLFAKFGAFPVFVIDGTPSPLKSKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCV 120
            LF+KFGA+PVFV+DGTPSPLKS+ARI+RFFR SGIDT +LP ++D +SV+RN  F++ V
Sbjct: 61  NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFSEWV 120

Query: 121 KECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNS 180
           +EC ELLEL G+PVL+A GEAEALCA+LN +GFVDACIT DSDAFLFGA CVIK   PNS
Sbjct: 121 REC-ELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDIKPNS 180

Query: 181 K--------AYIEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDIL 240
           +        ++IE+ LGLKRKHLIAISLLVGND+D  GV G+G+D A+R V+++++D +L
Sbjct: 181 REPFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSEDQVL 240

Query: 241 NKLHEIGKEDNTSLQGGQSSDTNSR------KVKCSHCSFCGHPGSKRDHVKIPCEYCDV 300
            +L +IG     ++ GG  S  +        K +  HCS CGH GSKR H K  CE+C  
Sbjct: 241 ERLQDIGNGLQPAVPGGIKSGDDGEEFRSEMKKRSPHCSRCGHLGSKRTHFKSSCEHCGC 300

Query: 301 SHGSCCIKKPDGFKCNCSSCDTDREEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLC 360
             G  CIKKP GF+C CS C  DR+ +E+KK  +W ++VC+KIA+ P FP+ +++++YL 
Sbjct: 301 DSG--CIKKPLGFRCECSFCSKDRDLREQKKTNDWWIKVCDKIALAPEFPNRKIIELYLS 360

Query: 361 DNHSYFSDDDLILSWESPKTEILIDFLVFHLRWEPSYIRQRLLPMLSTIFLREMA-NNPI 420
           D     + D   +SW +P T +L+D +VF L W+PSY+R+ LLPMLSTI+LRE A NN  
Sbjct: 361 D--GLMTGDGSSMSWGTPDTGMLVDLMVFKLHWDPSYVRKMLLPMLSTIYLREKARNNTG 420

Query: 421 QTLLYDQYEFDSILREKIRYGHPFYVVKWKRAIPVLDNVVYEGSSEGLGTGPEDAIDV-- 480
             LL DQYEF SI   K RYGH  +V++W++  P   +      SE     PE++I V  
Sbjct: 421 YALLCDQYEFHSIKCIKTRYGHQSFVIRWRK--PKSTSGYSHSHSE-----PEESIVVLE 480

Query: 481 --DEPVDPTDESDSPKIHIQEGCSFLLTDENMDLVRAAYPEQTAKFLQEKEVKRQKTPTT 540
             +E VDP D  + P++    G  FLLTDE + LV++A+P++T  FL EK+++  K    
Sbjct: 481 EEEESVDPLDGLNEPQVQNDNGDCFLLTDECIGLVQSAFPDETEHFLHEKKLRESKKKNV 540

Query: 541 TPPSEASGKSDSLKAKGAQLSITEFYRATKTQQQTAETTDLTNEGEETSTEKRKA-SSSS 594
           +    A+ ++ ++   G Q SIT+FYR+ K +    ++ +     + ++ +KR+A S+SS
Sbjct: 541 SEEETATPRATTM---GVQRSITDFYRSAK-KAAAGQSIETGGSSKASAEKKRQATSTSS 597

[Close]

BLAST of Carg11105 vs. TAIR 10
Match: AT3G48900.2 (single-stranded DNA endonuclease family protein )

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-25
Identity = 90/272 (33.09%), Postives = 131/272 (48.16%), Query Frame = 0


Query: 8   WDLLKPHARTEGFDFLRNKRVAVDLSFWIVQHETAIK---ASVRSPHLRLTFFRTITLFA 67
           WD+L+P  +T   D L+NKRV VDLS W+V+     K   A+    +LR  F R   L A
Sbjct: 7   WDVLEPCKKTFPLDHLQNKRVCVDLSCWMVELHKVNKSYCATKEKVYLRGFFHRLRALIA 66

Query: 68  KFGAFPVFVIDGTPSPLK---SKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCVK 127
                 + V DG    +K    K R+   F ++  D    P  E  +  +  S+F+  +K
Sbjct: 67  -LNCSIILVSDGAIPGIKVPTYKRRLKARFEIA--DDGVEPSKETSLKRNMGSEFSCIIK 126

Query: 128 ECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNSK 187
           E   +    G+  L+   EAEA CA LN +   DAC + DSD FLFGAK V +       
Sbjct: 127 EAKVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSFDSDIFLFGAKTVYREICLGEG 186

Query: 188 AY--------IEAALGLKRKHLIAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDILN 247
            Y        I+  LGL R  LIA++LL+G+D+   GV+G+  + A   V+   D+ IL 
Sbjct: 187 GYVVCYEMDDIKKKLGLGRNSLIALALLLGSDYS-QGVRGLRQEKACELVRSIGDNVILE 246

Query: 248 KLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCS 266
           K+   G      L   +    + ++V+ S CS
Sbjct: 247 KVASEG------LSFAEKPRKSKKQVRPSVCS 268

[Close]

BLAST of Carg11105 vs. TAIR 10
Match: AT3G28030.1 (5'-3' exonuclease family protein )

HSP 1 Score: 96.3 bits (238), Expect = 8.9e-20
Identity = 85/329 (25.84%), Postives = 139/329 (42.25%), Query Frame = 0


Query: 83   SKARIARFFRLSGIDTHDLPRVEDRISVDRNSKFAKCVKECVELLELFGVPVLEAKGEAE 142
            S+A I    R+   +   L   + ++  +  S  ++   EC ELL++FG+P + A  EAE
Sbjct: 889  SEANIEEEIRVLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAE 948

Query: 143  ALCAELNRKGFVDACITADSDAFLFGAKCVIKSFHPNSKAY-------IEAALGLKRKHL 202
            A CA + +   VD  +T DSD FLFGA+ V K+   + K         IE  LGL R  +
Sbjct: 949  AQCAFMEQSNLVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKELGLSRDKI 1008

Query: 203  IAISLLVGNDHDLNGVQGVGLDTAVRFVQDYTDDDILNKLHEIGKEDNTSLQGGQSSDTN 262
            I +++L+G+D+   G+ G+G+  A+  V  + ++D L K  E  +  + ++ G   + T 
Sbjct: 1009 IRMAMLLGSDY-TEGISGIGIVNAIEVVTAFPEEDGLQKFREWVESPDPTILGKTDAKTG 1068

Query: 263  SRKVKCSHCSFCGHPGSKRDHVKIPCEYCDVSHGSCCIKKPDGFKCNCSSCDTDR----- 322
            S KVK                            GS  +    G     S+ DT+      
Sbjct: 1069 S-KVK--------------------------KRGSASVDN-KGIISGASTDDTEEIKQIF 1128

Query: 323  EEKEKKKQENWRLRVCNKIAMEPNFPSSELLQMYLCDNHSYFSDDDLILSWESPKTEILI 382
             ++ +K  +NW + +         FPS  ++  YL       ++     SW  P   +L 
Sbjct: 1129 MDQHRKVSKNWHIPL--------TFPSEAVISAYLNPQVDLSTEK---FSWGKPDLSVLR 1177

Query: 383  DFLVFHLRWEPSYIRQRLLPMLSTIFLRE 400
                    W      + LLP+L     RE
Sbjct: 1189 KLCWEKFNWNGKKTDELLLPVLKEYEKRE 1177

[Close]

BLAST of Carg11105 vs. TAIR 10
Match: AT3G48900.1 (single-stranded DNA endonuclease family protein )

HSP 1 Score: 81.6 bits (200), Expect = 2.3e-15
Identity = 57/172 (33.14%), Postives = 85/172 (49.42%), Query Frame = 0


Query: 102 PRVEDRISVDRNSKFAKCVKECVELLELFGVPVLEAKGEAEALCAELNRKGFVDACITAD 161
           P  E  +  +  S+F+  +KE   +    G+  L+   EAEA CA LN +   DAC + D
Sbjct: 40  PSKETSLKRNMGSEFSCIIKEAKVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSFD 99

Query: 162 SDAFLFGAKCVIKSFHPNSKAY--------IEAALGLKRKHLIAISLLVGNDHDLNGVQG 221
           SD FLFGAK V +        Y        I+  LGL R  LIA++LL+G+D+   GV+G
Sbjct: 100 SDIFLFGAKTVYREICLGEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGSDYS-QGVRG 159

Query: 222 VGLDTAVRFVQDYTDDDILNKLHEIGKEDNTSLQGGQSSDTNSRKVKCSHCS 266
           +  + A   V+   D+ IL K+   G      L   +    + ++V+ S CS
Sbjct: 160 LRQEKACELVRSIGDNVILEKVASEG------LSFAEKPRKSKKQVRPSVCS 204

The following BLAST results are available for this feature:

BLAST of Carg11105 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026031.1	0.0e+00	100.00	Flap endonuclease GEN-like 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6593691.1	0.0e+00	97.84	Flap endonuclease GEN-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022964472.1	0.0e+00	97.84	flap endonuclease GEN-like 1 isoform X1 [Cucurbita moschata]	[more]
XP_023513684.1	0.0e+00	97.67	flap endonuclease GEN-like 1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022999822.1	0.0e+00	96.51	flap endonuclease GEN-like 1 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg11105 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPD2	2.3e-169	52.37	Flap endonuclease GEN-like 1 OS=Arabidopsis thaliana OX=3702 GN=GEN1 PE=1 SV=3	[more]
Q64MA3	1.3e-153	47.81	Flap endonuclease GEN-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD PE=...	[more]
Q8BMI4	1.6e-45	27.55	Flap endonuclease GEN homolog 1 OS=Mus musculus OX=10090 GN=Gen1 PE=1 SV=2	[more]
Q17RS7	1.6e-42	27.03	Flap endonuclease GEN homolog 1 OS=Homo sapiens OX=9606 GN=GEN1 PE=1 SV=2	[more]
Q9VRJ0	2.3e-36	26.06	Flap endonuclease GEN OS=Drosophila melanogaster OX=7227 GN=Gen PE=1 SV=1	[more]

BLAST of Carg11105 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HHW8	0.0e+00	97.84	flap endonuclease GEN-like 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KBV0	0.0e+00	96.51	flap endonuclease GEN-like 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494...	[more]
A0A6J1HKX7	2.0e-298	89.53	flap endonuclease GEN-like 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A5D3DLF9	4.3e-296	85.25	Flap endonuclease GEN-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CD60	9.5e-296	85.08	flap endonuclease GEN-like 1 OS=Cucumis melo OX=3656 GN=LOC103499055 PE=4 SV=1	[more]

BLAST of Carg11105 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01880.1	1.6e-170	52.37	5'-3' exonuclease family protein	[more]
AT1G01880.2	1.2e-168	52.20	5'-3' exonuclease family protein	[more]
AT3G48900.2	1.1e-25	33.09	single-stranded DNA endonuclease family protein	[more]
AT3G28030.1	8.9e-20	25.84	5'-3' exonuclease family protein	[more]
AT3G48900.1	2.3e-15	33.14	single-stranded DNA endonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006084	XPG/Rad2 endonuclease	PRINTS	PR00853	XPGRADSUPER	coord: 70..89 score: 39.38 coord: 127..144 score: 46.35 coord: 25..39 score: 38.12 coord: 148..168 score: 45.24
IPR006084	XPG/Rad2 endonuclease	PANTHER	PTHR11081	FLAP ENDONUCLEASE FAMILY MEMBER	coord: 1..579
IPR006085	XPG, N-terminal	SMART	SM00485	xpgn3	coord: 1..96 e-value: 1.3E-4 score: 28.5
IPR006085	XPG, N-terminal	PFAM	PF00752	XPG_N	coord: 1..86 e-value: 4.8E-9 score: 36.6
IPR006086	XPG-I domain	SMART	SM00484	xpgineu	coord: 128..200 e-value: 1.9E-13 score: 60.7
IPR006086	XPG-I domain	PFAM	PF00867	XPG_I	coord: 129..205 e-value: 1.4E-17 score: 63.8
None	No IPR available	GENE3D	1.10.150.20		coord: 193..259 e-value: 1.7E-7 score: 33.1
None	No IPR available	GENE3D	3.40.50.1010		coord: 1..192 e-value: 2.2E-40 score: 140.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 545..564
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 507..594
None	No IPR available	PANTHER	PTHR11081:SF59	FLAP ENDONUCLEASE GEN-LIKE 1	coord: 1..579
None	No IPR available	CDD	cd09869	PIN_GEN1	coord: 2..194 e-value: 2.13671E-77 score: 242.895
IPR036279	5'-3' exonuclease, C-terminal domain superfamily	SUPERFAMILY	47807	5' to 3' exonuclease, C-terminal subdomain	coord: 190..400
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 6..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11105-RA	Carg11105-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0009555	pollen development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0017108	5'-flap endonuclease activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0004518	nuclease activity