Carg11103 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11103
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ubiquitin-related modifier 1 homolog
Location	Carg_Chr08: 5480410 .. 5480954 (-)
RNA-Seq Expression	Carg11103
Synteny	Carg11103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGACATGACAGTAATATTAATGTTTAAATGCAGTGGGGGATTGGAGTTGCTATGTGACTCTGTGAAGATCCATAATGTCAGCATCAATCCTGAAAATGGAGCGGGAAAGGTAAACCATATTTTACAACAAGTTAATGAAAGATTCTAGTCGATATCATCAGATTCATATCTTCCTGTTTCTCCTTTCATCTCTCTGTTTATTCGTCTAATGTTTTTTGTTTAACACGCGTCTCAGTTAGTCATGAAAGATTTGCTCTCTTGGGTCCGTTCTAATCTGATCAAGGAGCGGCCAGAAATGTTTATGAAAGGCGACACCGTGTAAGTAAAAGAAACATCTCGTTTATGAAAGCCGAAACTTTTTGAAGAATTGTGAGTATATTAAGGTTGTAGCTGACAGTGGCATGGTTTGGAATGTGGTGCAGAAGACCTGGTGTTCTGGTGCTTGTAAATGATTGTGATTGGGAGCTGAGCGGGCAGCTTGACACAACATTGGAAGAGAAAGACGTGGTTGTGTTCATATCCACCTTGCATGGAGGCTAA

mRNA sequence

ATGGTCGACATGACAGTAATATTAATGTTTAAATGCAGTGGGGGATTGGAGTTGCTATGTGACTCTGTGAAGATCCATAATGTCAGCATCAATCCTGAAAATGGAGCGGGAAAGTTAGTCATGAAAGATTTGCTCTCTTGGGTCCGTTCTAATCTGATCAAGGAGCGGCCAGAAATGTTTATGAAAGGCGACACCGTAAGACCTGGTGTTCTGGTGCTTGTAAATGATTGTGATTGGGAGCTGAGCGGGCAGCTTGACACAACATTGGAAGAGAAAGACGTGGTTGTGTTCATATCCACCTTGCATGGAGGCTAA

Coding sequence (CDS)

ATGGTCGACATGACAGTAATATTAATGTTTAAATGCAGTGGGGGATTGGAGTTGCTATGTGACTCTGTGAAGATCCATAATGTCAGCATCAATCCTGAAAATGGAGCGGGAAAGTTAGTCATGAAAGATTTGCTCTCTTGGGTCCGTTCTAATCTGATCAAGGAGCGGCCAGAAATGTTTATGAAAGGCGACACCGTAAGACCTGGTGTTCTGGTGCTTGTAAATGATTGTGATTGGGAGCTGAGCGGGCAGCTTGACACAACATTGGAAGAGAAAGACGTGGTTGTGTTCATATCCACCTTGCATGGAGGCTAA

Protein sequence

MVDMTVILMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

Homology

[Close]

BLAST of Carg11103 vs. NCBI nr
Match: KAG7026033.1 (Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.1 bits (549), Expect = 1.4e-52
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MVDMTVILMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMF 60
           MVDMTVILMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMF
Sbjct: 1   MVDMTVILMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMF 60

Query: 61  MKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           MKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  MKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 104

[Close]

BLAST of Carg11103 vs. NCBI nr
Match: XP_038876424.1 (ubiquitin-related modifier 1 homolog 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 5.2e-50
Identity = 98/104 (94.23%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MVDMTVILMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMF 60
           M+DMTVIL FKCSGGLELLCDSVKIHNVSI+PENG GKL+MKDLLSWVR+NLIKERPEMF
Sbjct: 1   MMDMTVILTFKCSGGLELLCDSVKIHNVSIDPENGVGKLIMKDLLSWVRTNLIKERPEMF 60

Query: 61  MKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           MKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  MKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 104

[Close]

BLAST of Carg11103 vs. NCBI nr
Match: XP_022145475.1 (ubiquitin-related modifier 1 homolog 2 isoform X1 [Momordica charantia])

HSP 1 Score: 202.6 bits (514), Expect = 1.7e-48
Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 2   VDMTVILMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFM 61
           +DMT++L FKCSGGLELLC+SVKIHNVSI+PENGAGKL+MKDLLSWVR+NLIKERPEMFM
Sbjct: 1   MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFM 60

Query: 62  KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           KGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTLHGG
Sbjct: 61  KGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG 103

[Close]

BLAST of Carg11103 vs. NCBI nr
Match: KAA0040023.1 (ubiquitin-related modifier 1-like protein 2 [Cucumis melo var. makuwa] >TYK24478.1 ubiquitin-related modifier 1-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 8.2e-48
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 2   VDMTVILMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFM 61
           +DMT+ L FKCSGGLELLC+SVKIHNVSI+PENG GKL+MKDLLSWVR+NLIKERPEMFM
Sbjct: 1   MDMTLTLDFKCSGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFM 60

Query: 62  KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 103

[Close]

BLAST of Carg11103 vs. NCBI nr
Match: KAG6593693.1 (Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.6 bits (488), Expect = 1.7e-45
Identity = 92/97 (94.85%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 8   LMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVR 67
           L  +  GGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVR
Sbjct: 3   LTLEFGGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVR 62

Query: 68  PGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           PGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 63  PGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]

BLAST of Carg11103 vs. ExPASy Swiss-Prot
Match: B3H7G2 (Ubiquitin-related modifier 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=URM1-2 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 7.8e-41
Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 14  GGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVL 73
           GGLELLCDSVKIH V+IN  N +  L MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVL
Sbjct: 9   GGLELLCDSVKIHKVNINLLNDSDILTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVL 68

Query: 74  VNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           VNDCDWELSGQLDTTLE+KDV+VFISTLHGG
Sbjct: 69  VNDCDWELSGQLDTTLEDKDVIVFISTLHGG 99

[Close]

BLAST of Carg11103 vs. ExPASy Swiss-Prot
Match: A0MDQ1 (Ubiquitin-related modifier 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=URM1-1 PE=3 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 6.1e-38
Identity = 76/99 (76.77%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 8   LMFKCSGGLELLCDSVKIHNVSINPENGAGK--LVMKDLLSWVRSNLIKERPEMFMKGDT 67
           L  +  GGLELLCDS KIH V+++  NGA      MK LLSWVR+NLIKERPEMFMKGDT
Sbjct: 3   LTLEFGGGLELLCDSEKIHKVNVDLPNGADSDDFTMKHLLSWVRTNLIKERPEMFMKGDT 62

Query: 68  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           VRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTLHGG
Sbjct: 63  VRPGVLVLVNDCDWELSGQLDTVIEDKDVVVFISTLHGG 101

[Close]

BLAST of Carg11103 vs. ExPASy Swiss-Prot
Match: Q7GBC8 (Ubiquitin-related modifier 1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=URM1 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-35
Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 8   LMFKCSGGLELLCD-SVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTV 67
           L  +  GGLELL + S K+H V + P +G GK+VMK LL+WV+SNLIKERPEMF+KGD+V
Sbjct: 3   LTLEFGGGLELLLEKSTKVHKVDLQPNDGDGKVVMKGLLAWVKSNLIKERPEMFLKGDSV 62

Query: 68  RPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           RPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Sbjct: 63  RPGVLVLINDCDWELCGGLDAELEEKDVVVFISTLHGG 100

[Close]

BLAST of Carg11103 vs. ExPASy Swiss-Prot
Match: Q0D6M1 (Ubiquitin-related modifier 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=URM1 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-35
Identity = 70/98 (71.43%), Postives = 81/98 (82.65%), Query Frame = 0


Query: 8   LMFKCSGGLELLCD-SVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTV 67
           L  +  GGLELL + S K+H V + P +G GK+VMK LL+WV+SNLIKERPEMF+KGD+V
Sbjct: 3   LTLEFGGGLELLLEKSTKVHKVDLQPNDGDGKVVMKGLLAWVKSNLIKERPEMFLKGDSV 62

Query: 68  RPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           RPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Sbjct: 63  RPGVLVLINDCDWELCGGLDAELEEKDVVVFISTLHGG 100

[Close]

BLAST of Carg11103 vs. ExPASy Swiss-Prot
Match: B6SXH2 (Ubiquitin-related modifier 1 homolog OS=Zea mays OX=4577 GN=URM1 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.8e-33
Identity = 68/99 (68.69%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 8   LMFKCSGGLELLCD-SVKIHNVSI-NPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDT 67
           L  +  GGLELL + S K+H V +  P++G GK+ MK LLSWV+ NLIKERPEMF+K D+
Sbjct: 3   LTLEFGGGLELLLENSTKVHKVEVTTPKDGQGKVTMKFLLSWVKENLIKERPEMFLKADS 62

Query: 68  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Sbjct: 63  VRPGVLVLINDCDWELCGGLDAELEEKDVVVFISTLHGG 101

[Close]

BLAST of Carg11103 vs. ExPASy TrEMBL
Match: A0A6J1CUK8 (Ubiquitin-related modifier 1 homolog OS=Momordica charantia OX=3673 GN=LOC111014914 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 8.0e-49
Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 2   VDMTVILMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFM 61
           +DMT++L FKCSGGLELLC+SVKIHNVSI+PENGAGKL+MKDLLSWVR+NLIKERPEMFM
Sbjct: 1   MDMTIVLAFKCSGGLELLCNSVKIHNVSIDPENGAGKLIMKDLLSWVRTNLIKERPEMFM 60

Query: 62  KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           KGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTLHGG
Sbjct: 61  KGDTVRPGVLVLVNDCDWELSGQLDTPLEEKDVVVFISTLHGG 103

[Close]

BLAST of Carg11103 vs. ExPASy TrEMBL
Match: A0A0A0KCT7 (Ubiquitin-related modifier 1 homolog OS=Cucumis sativus OX=3659 GN=Csa_6G075130 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.4e-48
Identity = 95/103 (92.23%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 2   VDMTVILMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFM 61
           +DMT+IL FKCSGGLELLC+SVKIHNVSI+PENG GK +MKDLLSWVRSNLIKERPEMFM
Sbjct: 1   MDMTLILDFKCSGGLELLCNSVKIHNVSIDPENGVGKFIMKDLLSWVRSNLIKERPEMFM 60

Query: 62  KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 103

[Close]

BLAST of Carg11103 vs. ExPASy TrEMBL
Match: A0A5D3DLM7 (Ubiquitin-related modifier 1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00190 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.0e-48
Identity = 94/103 (91.26%), Postives = 100/103 (97.09%), Query Frame = 0


Query: 2   VDMTVILMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFM 61
           +DMT+ L FKCSGGLELLC+SVKIHNVSI+PENG GKL+MKDLLSWVR+NLIKERPEMFM
Sbjct: 1   MDMTLTLDFKCSGGLELLCNSVKIHNVSIDPENGVGKLIMKDLLSWVRANLIKERPEMFM 60

Query: 62  KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 61  KGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 103

[Close]

BLAST of Carg11103 vs. ExPASy TrEMBL
Match: A0A6J1KGQ8 (Ubiquitin-related modifier 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494196 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.4e-45
Identity = 91/97 (93.81%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 8   LMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVR 67
           L  +  GGLELLCDSVKIHNVSINPENG GKLVMKDLLSWVRSNLIKERPEMFMKGDTVR
Sbjct: 3   LTLEFGGGLELLCDSVKIHNVSINPENGVGKLVMKDLLSWVRSNLIKERPEMFMKGDTVR 62

Query: 68  PGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           PGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 63  PGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]

BLAST of Carg11103 vs. ExPASy TrEMBL
Match: A0A6J1HIP6 (Ubiquitin-related modifier 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111464389 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.1e-45
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 8   LMFKCSGGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVR 67
           L  +  GGLELLCDSVKIHN+SINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKG+TVR
Sbjct: 3   LTLEFGGGLELLCDSVKIHNISINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGNTVR 62

Query: 68  PGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           PGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Sbjct: 63  PGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 99

[Close]

BLAST of Carg11103 vs. TAIR 10
Match: AT3G61113.1 (Ubiquitin related modifier 1 )

HSP 1 Score: 167.5 bits (423), Expect = 5.5e-42
Identity = 79/91 (86.81%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 14  GGLELLCDSVKIHNVSINPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVL 73
           GGLELLCDSVKIH V+IN  N +  L MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVL
Sbjct: 9   GGLELLCDSVKIHKVNINLLNDSDILTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVL 68

Query: 74  VNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           VNDCDWELSGQLDTTLE+KDV+VFISTLHGG
Sbjct: 69  VNDCDWELSGQLDTTLEDKDVIVFISTLHGG 99

[Close]

BLAST of Carg11103 vs. TAIR 10
Match: AT2G45695.1 (Ubiquitin related modifier 1 )

HSP 1 Score: 157.9 bits (398), Expect = 4.4e-39
Identity = 76/99 (76.77%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 8   LMFKCSGGLELLCDSVKIHNVSINPENGAGK--LVMKDLLSWVRSNLIKERPEMFMKGDT 67
           L  +  GGLELLCDS KIH V+++  NGA      MK LLSWVR+NLIKERPEMFMKGDT
Sbjct: 3   LTLEFGGGLELLCDSEKIHKVNVDLPNGADSDDFTMKHLLSWVRTNLIKERPEMFMKGDT 62

Query: 68  VRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG 105
           VRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTLHGG
Sbjct: 63  VRPGVLVLVNDCDWELSGQLDTVIEDKDVVVFISTLHGG 101

The following BLAST results are available for this feature:

BLAST of Carg11103 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026033.1	1.4e-52	100.00	Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_038876424.1	5.2e-50	94.23	ubiquitin-related modifier 1 homolog 2 isoform X2 [Benincasa hispida]	[more]
XP_022145475.1	1.7e-48	91.26	ubiquitin-related modifier 1 homolog 2 isoform X1 [Momordica charantia]	[more]
KAA0040023.1	8.2e-48	91.26	ubiquitin-related modifier 1-like protein 2 [Cucumis melo var. makuwa] >TYK24478...	[more]
KAG6593693.1	1.7e-45	94.85	Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Carg11103 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H7G2	7.8e-41	86.81	Ubiquitin-related modifier 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=URM1-2...	[more]
A0MDQ1	6.1e-38	76.77	Ubiquitin-related modifier 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=URM1-1...	[more]
Q7GBC8	2.2e-35	71.43	Ubiquitin-related modifier 1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=U...	[more]
Q0D6M1	2.2e-35	71.43	Ubiquitin-related modifier 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
B6SXH2	7.8e-33	68.69	Ubiquitin-related modifier 1 homolog OS=Zea mays OX=4577 GN=URM1 PE=3 SV=1	[more]

BLAST of Carg11103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CUK8	8.0e-49	91.26	Ubiquitin-related modifier 1 homolog OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A0A0KCT7	1.4e-48	92.23	Ubiquitin-related modifier 1 homolog OS=Cucumis sativus OX=3659 GN=Csa_6G075130 ...	[more]
A0A5D3DLM7	4.0e-48	91.26	Ubiquitin-related modifier 1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1KGQ8	2.4e-45	93.81	Ubiquitin-related modifier 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111494196...	[more]
A0A6J1HIP6	4.1e-45	92.78	Ubiquitin-related modifier 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114643...	[more]

BLAST of Carg11103 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61113.1	5.5e-42	86.81	Ubiquitin related modifier 1	[more]
AT2G45695.1	4.4e-39	76.77	Ubiquitin related modifier 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015221	Ubiquitin-related modifier 1	PIRSF	PIRSF037379	Urm1	coord: 3..104 e-value: 1.2E-36 score: 122.9
IPR015221	Ubiquitin-related modifier 1	PFAM	PF09138	Urm1	coord: 10..104 e-value: 9.7E-34 score: 115.6
IPR015221	Ubiquitin-related modifier 1	PANTHER	PTHR14986	RURM1 PROTEIN	coord: 4..104
IPR015221	Ubiquitin-related modifier 1	HAMAP	MF_03048	Urm1	coord: 4..104 score: 32.914551
IPR015221	Ubiquitin-related modifier 1	CDD	cd01764	Ubl_Urm1	coord: 12..104 e-value: 3.46587E-46 score: 141.895
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 3..104 e-value: 8.4E-35 score: 121.0
IPR016155	Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp	SUPERFAMILY	54285	MoaD/ThiS	coord: 11..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11103-RA	Carg11103-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032447	protein urmylation
biological_process	GO:0034227	tRNA thio-modification
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0031386	protein tag