Carg11089 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg11089
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLOB domain-containing protein
LocationCarg_Chr08: 5589206 .. 5591328 (-)
RNA-Seq ExpressionCarg11089
SyntenyCarg11089
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAAGTGGCGGCGGAGGAGGAGGAGTAGGGGGAGGAGTAGGTCTGGGGAGTGGGAGTGGCGGCGGGGGAGGGCCATGTGGGGCCTGCAAGTTTCTTCGAAGAAAGTGCGTTCCAGGGTGCATATTTGCCCCATATTTCGACTCGGAACAAGGCGCCGCCCATTTCGCTGCTGTCCACAAGGTGTTCGGAGCCAGCAATGTGTCCAAGCTCCTCCTCCATATCCCTATCCATAAGCGCCCCGACGCCGTGGTCACAATTTGCTACGAGGCCCAGGCTCGCCTCCGAGACCCTGTCTATGGCTGTGTCTCTCACATCTTTGCCCTTCAACAACAGGTAAGTAAAAACTACCCTACTCTACCCTTCAATCGGTAAAGGATAAAGCTACTTAATTCTACTACCCTCCCACTTTAATTTATTATTATATTATTACCAAATCATTTCCCCGGCGGTTACCACGGTAATATACCATAATTAAATTCCTTTTTTTCTTTTTCTTTTTTCAAATAAACATTTTCTGGGTATTTATTTATTTATTTATTTATTATTTGCAGTTATTAAGGAACTGGTCGGGCTATTGCCTTAAACTTAAGCTTTTCATTACAAACAACACTCATTTCCTACGTTTCCCCCAATATTCAGCTTCCTGTCAGTGTATCTTCTAAACCAAATCATAATTTTTTTTAAAAATAATATTCTCTACAATTTTAATTCTTATAAGTTTTGGTCAAAATTAGAATTTTATAATGAATTAAATGATTTTTTGGAAACTTTTTTTAAGTAAAAGAAAATATTTTCCCTTTTATTGTTTTTTTTTTATATATAAAAATTAAAAACCAAAAATAGTTTTTATATAGTTTGGATTATTTAATATTTTTATTTTTTTTTAATCTATGTATGTATACTGCATATATAGCAATACCTACTACGTAAGTATCTTTGTACTATTAACAGTATGGTTGGTAAATATTTGTTTGAGATGAAATAAAATTAATTTTAATACTTTATAATTTACATTTTTTTTAAAATTATTTGCTAATTTTACTTATATTTGTTTCTAAAAATAAAAAAGAACCTTGGCGTTAAACAAGCCCTAAGGGTATTTTTATATATTTGAAAACAATCCTAGTAAAATAGAAAAAGCTAAAACTAGTTCAATTTCCACTTTAATTTTGTTTTTTTATTATTTCTTTTTCTTTTTATTCTTATTTTTAGTTGAGTGTAATCTACTCTCAATAATTTATTTCATCTTAAAACTCTATTTATGCTTAATTTAAACCTAATATATATATATATATATATATTATATTAATTAGTTGAATTTTTTAATTTTATTTTTTAGGGAAATATGCAATAAGAATAAACAAAAAATTAGACTCAAGCCTAATAAATTTTTTTTTTTTTTTAAATTTTGAATACAATAAAAAATACTAAAGAGTGATATGTATTTCTTTACTTGAATTATGAAATTTAAAAACATTATGATTAAGATATATATATATGTTAGTTATGTATTTTAAAATTTATTTATTTTTGTCGTGTAGTTAAATTATTTTATTTTAAATTTATTTTAGTTTTTATTTTTATTTTTAAGTTTTGATCTATTTTTGTACTTTCATATTAATTTATGTGAAAATAATAATAAACATAATAAAATTTAAATGTTTATAATGTTAATATGTAAATTAAAAACTTTGCAGGTGGTGAGTTTGCAAGCCGAGCTGTCGTACCTCCAAGCCCAACTAGCATCACTGGAACTGCCGTCGCCACCAAACCCGCCACCTCCACCTCCACCACCAAGTTTCCAAGGGGTACCGCCGCTTTCCATCTCAGACCTGCCATCCCCCCCCTCCCTGCCAGCCACTTACGACCTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCCTGGGTCTTGCCACAGCAGCGCCTCGACCCTCGCCAGTTCACCGGGGGTGGAGGCGGCAGTGGCGGTAGCAGCGGCTTGTCCACTGTGGCCGGAGAAGGCGATCTTCAAGCCTTGGCCCGTGAACTCCTGCATAGACACGGCGCTCCACCAAGCTCCGACTCCTCATCGCCGCCGTCAGTCTCTAAATAA

mRNA sequence

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAAGTGGCGGCGGAGGAGGAGGAGTAGGGGGAGGAGTAGGTCTGGGGAGTGGGAGTGGCGGCGGGGGAGGGCCATGTGGGGCCTGCAAGTTTCTTCGAAGAAAGTGCGTTCCAGGGTGCATATTTGCCCCATATTTCGACTCGGAACAAGGCGCCGCCCATTTCGCTGCTGTCCACAAGGTGTTCGGAGCCAGCAATGTGTCCAAGCTCCTCCTCCATATCCCTATCCATAAGCGCCCCGACGCCGTGGTCACAATTTGCTACGAGGCCCAGGCTCGCCTCCGAGACCCTGTCTATGGCTGTGTCTCTCACATCTTTGCCCTTCAACAACAGGTGGTGAGTTTGCAAGCCGAGCTGTCGTACCTCCAAGCCCAACTAGCATCACTGGAACTGCCGTCGCCACCAAACCCGCCACCTCCACCTCCACCACCAAGTTTCCAAGGGGTACCGCCGCTTTCCATCTCAGACCTGCCATCCCCCCCCTCCCTGCCAGCCACTTACGACCTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCCTGGGTCTTGCCACAGCAGCGCCTCGACCCTCGCCAGTTCACCGGGGGTGGAGGCGGCAGTGGCGGTAGCAGCGGCTTGTCCACTGTGGCCGGAGAAGGCGATCTTCAAGCCTTGGCCCGTGAACTCCTGCATAGACACGGCGCTCCACCAAGCTCCGACTCCTCATCGCCGCCGTCAGTCTCTAAATAA

Coding sequence (CDS)

ATGAGTGCCAACCCTAGTACTAGCGGCGGCGGAAGTGGCGGCGGAGGAGGAGGAGTAGGGGGAGGAGTAGGTCTGGGGAGTGGGAGTGGCGGCGGGGGAGGGCCATGTGGGGCCTGCAAGTTTCTTCGAAGAAAGTGCGTTCCAGGGTGCATATTTGCCCCATATTTCGACTCGGAACAAGGCGCCGCCCATTTCGCTGCTGTCCACAAGGTGTTCGGAGCCAGCAATGTGTCCAAGCTCCTCCTCCATATCCCTATCCATAAGCGCCCCGACGCCGTGGTCACAATTTGCTACGAGGCCCAGGCTCGCCTCCGAGACCCTGTCTATGGCTGTGTCTCTCACATCTTTGCCCTTCAACAACAGGTGGTGAGTTTGCAAGCCGAGCTGTCGTACCTCCAAGCCCAACTAGCATCACTGGAACTGCCGTCGCCACCAAACCCGCCACCTCCACCTCCACCACCAAGTTTCCAAGGGGTACCGCCGCTTTCCATCTCAGACCTGCCATCCCCCCCCTCCCTGCCAGCCACTTACGACCTGTCGTCCCTCTTTGACCCAATGGCTCAGCCTGCCTGGGTCTTGCCACAGCAGCGCCTCGACCCTCGCCAGTTCACCGGGGGTGGAGGCGGCAGTGGCGGTAGCAGCGGCTTGTCCACTGTGGCCGGAGAAGGCGATCTTCAAGCCTTGGCCCGTGAACTCCTGCATAGACACGGCGCTCCACCAAGCTCCGACTCCTCATCGCCGCCGTCAGTCTCTAAATAA

Protein sequence

MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPPSSDSSSPPSVSK
Homology
[Close]
BLAST of Carg11089 vs. NCBI nr
Match: KAG7026047.1 (LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 473.4 bits (1217), Expect = 1.2e-129
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0 

Query: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180
           QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS
Sbjct: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180

Query: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240
           SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP
Sbjct: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240

Query: 241 SSDSSSPPSVSK 253
           SSDSSSPPSVSK
Sbjct: 241 SSDSSSPPSVSK 252

[Close]
BLAST of Carg11089 vs. NCBI nr
Match: KAG6593707.1 (LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128
Identity = 251/252 (99.60%), Postives = 251/252 (99.60%), Query Frame = 0 

Query: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGGSGGGG GVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGGVGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180
           QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS
Sbjct: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180

Query: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240
           SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP
Sbjct: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240

Query: 241 SSDSSSPPSVSK 253
           SSDSSSPPSVSK
Sbjct: 241 SSDSSSPPSVSK 252

[Close]
BLAST of Carg11089 vs. NCBI nr
Match: XP_023513681.1 (LOB domain-containing protein 18-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 455.3 bits (1170), Expect = 3.4e-124
Identity = 245/253 (96.84%), Postives = 248/253 (98.02%), Query Frame = 0 

Query: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGGSGGGGGGV  G+G GSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGGGGV--GLGSGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIP+HKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPLHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180
           QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQG+PPLSISDLPSPPSLPATYDLS
Sbjct: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGLPPLSISDLPSPPSLPATYDLS 180

Query: 181 SLFDPMAQPAWVLPQQRLDPRQFT-GGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAP 240
           SLFDPMAQPAWVLPQQRLDPRQFT GGGGG GGSSGLSTVAGEGDLQALARELLHRHGAP
Sbjct: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGGGGGSSGLSTVAGEGDLQALARELLHRHGAP 240

Query: 241 PSSDSSSPPSVSK 253
           PSSDSSSPPSVSK
Sbjct: 241 PSSDSSSPPSVSK 251

[Close]
BLAST of Carg11089 vs. NCBI nr
Match: XP_022964016.1 (LOB domain-containing protein 18-like [Cucurbita moschata])

HSP 1 Score: 454.9 bits (1169), Expect = 4.5e-124
Identity = 245/252 (97.22%), Postives = 246/252 (97.62%), Query Frame = 0 

Query: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGGSGGGG G+G     GSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGGVGLGS----GSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180
           QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS
Sbjct: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180

Query: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240
           SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP
Sbjct: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240

Query: 241 SSDSSSPPSVSK 253
           SSDSSSPPSVSK
Sbjct: 241 SSDSSSPPSVSK 248

[Close]
BLAST of Carg11089 vs. NCBI nr
Match: XP_023000428.1 (LOB domain-containing protein 18-like [Cucurbita maxima])

HSP 1 Score: 451.4 bits (1160), Expect = 5.0e-123
Identity = 245/253 (96.84%), Postives = 245/253 (96.84%), Query Frame = 0 

Query: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGGSGGGG   GGGVG G GSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGG---GGGVGGGLGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180
           QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS
Sbjct: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180

Query: 181 SLFDPMAQPAWVLPQQRLDPRQFT-GGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAP 240
           SLFDPMAQPAWVLPQQRLDPRQFT GGGGG GG SGLSTVAGEGDLQALARELLHRHGAP
Sbjct: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGGGGGGSGLSTVAGEGDLQALARELLHRHGAP 240

Query: 241 PSSDSSSPPSVSK 253
           PSSDSSSPPSVSK
Sbjct: 241 PSSDSSSPPSVSK 250

[Close]
BLAST of Carg11089 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70
Identity = 168/254 (66.14%), Postives = 191/254 (75.20%), Query Frame = 0 

Query: 4   NPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAA 63
           N  T+ GG GGG GG G   G GS  GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQG+A
Sbjct: 6   NTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSA 65

Query: 64  HFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVV 123
           +FAAVHKVFGASNVSKLLLHIP+H+R DAVVTICYEAQAR+RDP+YGCV+HIFALQQQVV
Sbjct: 66  YFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVV 125

Query: 124 SLQAELSYLQAQLASLELPSP---PNPPPPPPPPSFQGVPPLSISDLPSPPS-LPATYDL 183
           +LQAE+SYLQA LASLELP P   P P P P P  F   PPL+I+DLP+  S LP+TYDL
Sbjct: 126 NLQAEVSYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDL 185

Query: 184 SSLFD-PMAQPAWVLPQQR-LDPRQFTGGGGGSGGSSGLSTVAGEG--DLQALARELLHR 243
           +S+FD   +  AW   Q+R +DPR     G  S  SS    + GE   DLQALA ELLHR
Sbjct: 186 ASIFDQTTSSSAWATQQRRFIDPRH--QYGVSSSSSSVAVGLGGENSHDLQALAHELLHR 245

Query: 244 HGAPPSSDSSSPPS 250
            G+PP + +   PS
Sbjct: 246 QGSPPPAATDHSPS 257

[Close]
BLAST of Carg11089 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.0e-62
Identity = 144/225 (64.00%), Postives = 163/225 (72.44%), Query Frame = 0 

Query: 27  SGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPI 86
           S SGGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLL H+P 
Sbjct: 9   SSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLHHVPE 68

Query: 87  HKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLELPSPPN 146
           HKRPDAVV+IC+EAQARLRDP+YGCVSHI +LQQQVVSLQ ELSYLQA LA+LELP P  
Sbjct: 69  HKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLELPQP-- 128

Query: 147 PPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGG 206
            PP  P  S   +  LSI+DLP+    P+ YDLSS+F+P+    W + QQ   PR     
Sbjct: 129 QPPQVPVSSSGSLQALSITDLPT--ISPSVYDLSSIFEPVMSSTWAMQQQ---PRP---- 188

Query: 207 GGGSGGSSGLSTVAGEGDLQALARELLH--RHGAPPSSDSSSPPS 250
                G    S + G G+LQALARE +H  +  A PS  +S   S
Sbjct: 189 SDHLFGVPSSSNMGGGGELQALAREFIHGGQMPAQPSPGTSGSAS 222

[Close]
BLAST of Carg11089 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.3e-41
Identity = 82/107 (76.64%), Postives = 94/107 (87.85%), Query Frame = 0 

Query: 31  GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPIHKRP 90
           G G PCGACKFLRRKCV GC+FAPYF  EQGAAHFAA+HKVFGASNVSKLL H+P+  RP
Sbjct: 3   GFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRP 62

Query: 91  DAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLA 138
           +A VTI YEAQARLRDP+YGCV+HIFALQQQV++LQA+L+ L+A  A
Sbjct: 63  EAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAA 109

[Close]
BLAST of Carg11089 vs. ExPASy Swiss-Prot
Match: O22132 (LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.5e-41
Identity = 91/148 (61.49%), Postives = 113/148 (76.35%), Query Frame = 0 

Query: 25  LGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHI 84
           L  G  GG GPCGACKFLRRKCV GC+FAPYFD+EQG A FAAVHKVFGASN SK+LL +
Sbjct: 6   LNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRL 65

Query: 85  PIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLE---L 144
           P+HKR DAVVT+CYEA AR+RDPVYG V H+F+LQ QV++LQAEL+++QA+L++++   L
Sbjct: 66  PLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQRFPL 125

Query: 145 PSPPNPPPPPPPPSFQGVPPLSISDLPS 170
            SP    PP   P+      +  S+L S
Sbjct: 126 QSPQQMQPPSFDPAHNNEYAMEPSNLDS 153

[Close]
BLAST of Carg11089 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.5e-40
Identity = 85/114 (74.56%), Postives = 96/114 (84.21%), Query Frame = 0 

Query: 27  SGSG---GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLH 86
           SG+G   G G PCGACKFLRRKC   CIFAPYF SEQGAA FAA+HKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 87  IPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLA 138
           +PIH R +AVVTI YEAQARL DPVYGCVSHIFALQQQV  LQ+++  ++AQ+A
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

[Close]
BLAST of Carg11089 vs. ExPASy TrEMBL
Match: A0A6J1HHP1 (LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111464166 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.2e-124
Identity = 245/252 (97.22%), Postives = 246/252 (97.62%), Query Frame = 0 

Query: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGGSGGGG G+G     GSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGGVGLGS----GSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180
           QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS
Sbjct: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180

Query: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240
           SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP
Sbjct: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240

Query: 241 SSDSSSPPSVSK 253
           SSDSSSPPSVSK
Sbjct: 241 SSDSSSPPSVSK 248

[Close]
BLAST of Carg11089 vs. ExPASy TrEMBL
Match: A0A6J1KML3 (LOB domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111494694 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 2.4e-123
Identity = 245/253 (96.84%), Postives = 245/253 (96.84%), Query Frame = 0 

Query: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGGSGGGG   GGGVG G GSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGSGGGG---GGGVGGGLGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120

Query: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180
           QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS
Sbjct: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180

Query: 181 SLFDPMAQPAWVLPQQRLDPRQFT-GGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAP 240
           SLFDPMAQPAWVLPQQRLDPRQFT GGGGG GG SGLSTVAGEGDLQALARELLHRHGAP
Sbjct: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGGGGGGSGLSTVAGEGDLQALARELLHRHGAP 240

Query: 241 PSSDSSSPPSVSK 253
           PSSDSSSPPSVSK
Sbjct: 241 PSSDSSSPPSVSK 250

[Close]
BLAST of Carg11089 vs. ExPASy TrEMBL
Match: A0A0A0KEN5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G076840 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.9e-99
Identity = 210/252 (83.33%), Postives = 217/252 (86.11%), Query Frame = 0 

Query: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGG G G    GG VG      GGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGG-GPGTASTGGSVG-----AGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQ 120

Query: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180
           QVVSLQAEL+YLQA LA+LELPSPPNPPPPPPPPSF   PPLSISDLPS  SLPATYDLS
Sbjct: 121 QVVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLS 180

Query: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240
           SLFDPMAQPAW + QQRLD RQF GGGGGS      ST  GEGDLQALARELL RHGAPP
Sbjct: 181 SLFDPMAQPAWAMQQQRLDHRQFAGGGGGS------STAPGEGDLQALARELLLRHGAPP 240

Query: 241 SSDSSSPPSVSK 253
            SD+SSP S+SK
Sbjct: 241 CSDASSPQSLSK 240

[Close]
BLAST of Carg11089 vs. ExPASy TrEMBL
Match: A0A5D3DLI5 (LOB domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00390 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.6e-98
Identity = 209/252 (82.94%), Postives = 216/252 (85.71%), Query Frame = 0 

Query: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGG G G    GG VG      GGGGPCGACKFLRRKCVPGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGG-GPGTASAGGSVG-----AGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120
           GAAHFAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYEAQARLRDPVYGCV+HIFALQQ
Sbjct: 61  GAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQ 120

Query: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180
           QVVSLQAEL+YLQA LA+LELPSPPNPPPPPPP SF   PPLSISDLPS  SLPATYDLS
Sbjct: 121 QVVSLQAELTYLQAHLATLELPSPPNPPPPPPPQSFPAQPPLSISDLPSASSLPATYDLS 180

Query: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240
           SLFDPMAQPAW + QQRLD RQF GGGGGS      ST  GEGDLQALARELL RHGAPP
Sbjct: 181 SLFDPMAQPAWAMQQQRLDHRQFAGGGGGS------STAPGEGDLQALARELLLRHGAPP 240

Query: 241 SSDSSSPPSVSK 253
            SD+SSP S+SK
Sbjct: 241 CSDASSPQSLSK 240

[Close]
BLAST of Carg11089 vs. ExPASy TrEMBL
Match: A0A6J1H4Q1 (LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111460030 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.7e-95
Identity = 197/252 (78.17%), Postives = 209/252 (82.94%), Query Frame = 0 

Query: 1   MSANPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQ 60
           MSANPSTSGGG GGGGG            GGGGGPCGACKFLRRKC+PGCIFAPYFDSEQ
Sbjct: 1   MSANPSTSGGGGGGGGG------------GGGGGPCGACKFLRRKCIPGCIFAPYFDSEQ 60

Query: 61  GAAHFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQ 120
           GA HFAAVHKVFGASNVSKLLLHIP+HKR DAVVTICYE+QARLRDPVYGCV+HIFALQ+
Sbjct: 61  GAGHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTICYESQARLRDPVYGCVAHIFALQR 120

Query: 121 QVVSLQAELSYLQAQLASLELPSPPNPPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLS 180
           QVVSLQAELSYLQA LA+LELPS      PPPPP+F   PP+SISDLPS  SLP TYDLS
Sbjct: 121 QVVSLQAELSYLQAHLATLELPS------PPPPPNFAVQPPVSISDLPSASSLPVTYDLS 180

Query: 181 SLFDPMAQPAWVLPQQRLDPRQFTGGGGGSGGSSGLSTVAGEGDLQALARELLHRHGAPP 240
           SLFDPMAQPAW + QQRLD RQF+ GG G     G ST AGEGDLQALAR LLHRHG PP
Sbjct: 181 SLFDPMAQPAWAMQQQRLDHRQFSSGGAG-----GSSTTAGEGDLQALARALLHRHGGPP 229

Query: 241 SSDSSSPPSVSK 253
            SD+SSPPS+SK
Sbjct: 241 CSDASSPPSLSK 229

[Close]
BLAST of Carg11089 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 267.7 bits (683), Expect = 9.5e-72
Identity = 168/254 (66.14%), Postives = 191/254 (75.20%), Query Frame = 0 

Query: 4   NPSTSGGGSGGGGGGVGGGVGLGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAA 63
           N  T+ GG GGG GG G   G GS  GGGGGPCGACKFLRRKCVPGCIFAPYFDSEQG+A
Sbjct: 6   NTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSA 65

Query: 64  HFAAVHKVFGASNVSKLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVV 123
           +FAAVHKVFGASNVSKLLLHIP+H+R DAVVTICYEAQAR+RDP+YGCV+HIFALQQQVV
Sbjct: 66  YFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVV 125

Query: 124 SLQAELSYLQAQLASLELPSP---PNPPPPPPPPSFQGVPPLSISDLPSPPS-LPATYDL 183
           +LQAE+SYLQA LASLELP P   P P P P P  F   PPL+I+DLP+  S LP+TYDL
Sbjct: 126 NLQAEVSYLQAHLASLELPQPQTRPQPMPQPQPLFFTPPPPLAITDLPASVSPLPSTYDL 185

Query: 184 SSLFD-PMAQPAWVLPQQR-LDPRQFTGGGGGSGGSSGLSTVAGEG--DLQALARELLHR 243
           +S+FD   +  AW   Q+R +DPR     G  S  SS    + GE   DLQALA ELLHR
Sbjct: 186 ASIFDQTTSSSAWATQQRRFIDPRH--QYGVSSSSSSVAVGLGGENSHDLQALAHELLHR 245

Query: 244 HGAPPSSDSSSPPS 250
            G+PP + +   PS
Sbjct: 246 QGSPPPAATDHSPS 257

[Close]
BLAST of Carg11089 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 241.5 bits (615), Expect = 7.3e-64
Identity = 144/225 (64.00%), Postives = 163/225 (72.44%), Query Frame = 0 

Query: 27  SGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHIPI 86
           S SGGGGGPCGACKFLRRKCV GCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLL H+P 
Sbjct: 9   SSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLHHVPE 68

Query: 87  HKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLELPSPPN 146
           HKRPDAVV+IC+EAQARLRDP+YGCVSHI +LQQQVVSLQ ELSYLQA LA+LELP P  
Sbjct: 69  HKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLATLELPQP-- 128

Query: 147 PPPPPPPPSFQGVPPLSISDLPSPPSLPATYDLSSLFDPMAQPAWVLPQQRLDPRQFTGG 206
            PP  P  S   +  LSI+DLP+    P+ YDLSS+F+P+    W + QQ   PR     
Sbjct: 129 QPPQVPVSSSGSLQALSITDLPT--ISPSVYDLSSIFEPVMSSTWAMQQQ---PRP---- 188

Query: 207 GGGSGGSSGLSTVAGEGDLQALARELLH--RHGAPPSSDSSSPPS 250
                G    S + G G+LQALARE +H  +  A PS  +S   S
Sbjct: 189 SDHLFGVPSSSNMGGGGELQALAREFIHGGQMPAQPSPGTSGSAS 222

[Close]
BLAST of Carg11089 vs. TAIR 10
Match: AT2G45410.1 (LOB domain-containing protein 19 )

HSP 1 Score: 169.1 bits (427), Expect = 4.6e-42
Identity = 91/148 (61.49%), Postives = 113/148 (76.35%), Query Frame = 0 

Query: 25  LGSGSGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLHI 84
           L  G  GG GPCGACKFLRRKCV GC+FAPYFD+EQG A FAAVHKVFGASN SK+LL +
Sbjct: 6   LNGGGRGGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRL 65

Query: 85  PIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLASLE---L 144
           P+HKR DAVVT+CYEA AR+RDPVYG V H+F+LQ QV++LQAEL+++QA+L++++   L
Sbjct: 66  PLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTIQRFPL 125

Query: 145 PSPPNPPPPPPPPSFQGVPPLSISDLPS 170
            SP    PP   P+      +  S+L S
Sbjct: 126 QSPQQMQPPSFDPAHNNEYAMEPSNLDS 153

[Close]
BLAST of Carg11089 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-41
Identity = 85/114 (74.56%), Postives = 96/114 (84.21%), Query Frame = 0 

Query: 27  SGSG---GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVSKLLLH 86
           SG+G   G G PCGACKFLRRKC   CIFAPYF SEQGAA FAA+HKVFGASNVSKLLL+
Sbjct: 4   SGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLN 63

Query: 87  IPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQLA 138
           +PIH R +AVVTI YEAQARL DPVYGCVSHIFALQQQV  LQ+++  ++AQ+A
Sbjct: 64  VPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

[Close]
BLAST of Carg11089 vs. TAIR 10
Match: AT3G03760.1 (LOB domain-containing protein 20 )

HSP 1 Score: 164.9 bits (416), Expect = 8.7e-41
Identity = 89/118 (75.42%), Postives = 99/118 (83.90%), Query Frame = 0 

Query: 21  GGVGLGSGSGGGG--GPCGACKFLRRKCVPGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 80
           GGV + + + G G   PCGACKFLRRKCV GCIFAP+F S+QGAA FAAVHKVFGASNVS
Sbjct: 35  GGVSMAAATTGTGTASPCGACKFLRRKCVSGCIFAPHFGSDQGAARFAAVHKVFGASNVS 94

Query: 81  KLLLHIPIHKRPDAVVTICYEAQARLRDPVYGCVSHIFALQQQVVSLQAELSYLQAQL 137
           KLL HIP+++R DAVVTI YEAQARL DPVYGCVS I ALQQQV SLQAELS +Q+QL
Sbjct: 95  KLLHHIPVNRRHDAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAELSVVQSQL 152

The following BLAST results are available for this feature:
BLAST of Carg11089 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7026047.11.2e-129100.00LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. argyros... [more]
KAG6593707.11.3e-12899.60LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_023513681.13.4e-12496.84LOB domain-containing protein 18-like [Cucurbita pepo subsp. pepo][more]
XP_022964016.14.5e-12497.22LOB domain-containing protein 18-like [Cucurbita moschata][more]
XP_023000428.15.0e-12396.84LOB domain-containing protein 18-like [Cucurbita maxima][more]
BLAST of Carg11089 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O221311.3e-7066.14LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S... [more]
O813231.0e-6264.00LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S... [more]
Q5UG131.3e-4176.64LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C... [more]
O221326.5e-4161.49LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 S... [more]
Q9SLB72.5e-4074.56LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S... [more]
BLAST of Carg11089 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HHP12.2e-12497.22LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111464... [more]
A0A6J1KML32.4e-12396.84LOB domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11149469... [more]
A0A0A0KEN51.9e-9983.33LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G076840 PE=3 SV... [more]
A0A5D3DLI51.6e-9882.94LOB domain-containing protein 18-like OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A6J1H4Q14.7e-9578.17LOB domain-containing protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111460... [more]
BLAST of Carg11089 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45420.19.5e-7266.14LOB domain-containing protein 18 [more]
AT4G00220.17.3e-6464.00Lateral organ boundaries (LOB) domain family protein [more]
AT2G45410.14.6e-4261.49LOB domain-containing protein 19 [more]
AT2G42430.11.7e-4174.56lateral organ boundaries-domain 16 [more]
AT3G03760.18.7e-4175.42LOB domain-containing protein 20 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 35..133
e-value: 1.3E-38
score: 131.6
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 34..136
score: 23.489609
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..252
NoneNo IPR availablePANTHERPTHR31529:SF4LOB DOMAIN-CONTAINING PROTEIN 18coord: 6..238
NoneNo IPR availablePANTHERPTHR31529LOB DOMAIN CONTAINING PROTEINcoord: 6..238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11089-RACarg11089-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0045893 positive regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus