Carg11081 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg11081
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr08: 5645520 .. 5647714 (-)
RNA-Seq ExpressionCarg11081
SyntenyCarg11081
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTTCTTCGACTGAATGGATATGGAACTGGAAGTAACAGAATGAAAAATCTCCTTGTTCTTTTCAAGCCAAGGATTGCCTTCTTCAATTCAACGTCTTCTTCATCATCACCTCAGATTTCGTCTCTGGAAACCCATTTCATCGATCTAATACATGCTTCCGATTCGACCCACAAGCTTCGTCAGATCCATGGTCAACTCTACCGCTGTAACATCTTCTCCAGCAGCCGGGTCGTGACCCAGTTCATCTCTTCGTGTTCTTCGCTAAATTCTGTCGACTATGCGGTTTTGATCTTCCAGCGGTTCGAGTTGAAGAATAGTTTCCTCTTCAATGCATTGATTCGAGGACTTGCTGAAAATTCCAGGTTCGAGAGCTCAATTTCTTACTTTGTTTGCATGCTCAGGTGGAAAATTAGCCCTGATAGGCTTACTTTTCCGTTTGTGCTAAAATCAGCGGCGGCTCTTTCCAATGGTGGCGTTGGGAGTGCTTTACATTCTGGGATTTTGAAATTTGGACTTGAGTTTGATTCTTTTGTGAGGGTTTCGTTGGTGGATATGTACGTGAAAGTTGACGATTTGGGTTCTGCCTTGAAGGTGTTTGATGAAAGTCCTGACAGAATTAAGAAGGGAAATGTGTTGATTTGGAATGTTCTTATTCATGGGTATTGTAGAGTGGGGAATTTGGTTAAAGCTACGGAGCTATTCGAGACAATGCCTGAGAAGGATACAGGTTCTTGGAATAGTTTGATTAATGGCTTCATGAGAAAGGGGCAGTTGGGTCCAGCACACGAACTGTTTGAGAAAATGCCTGAAAAGAATGTGGTTTCTTGGACTACAATGGTGAATGGATTTTCACAGAATGGAGACCCTGAAAAGGCATTGCAATTTTTCTTTTGTATGCTCGAAGAAGGCGCACGGCCGAACGATTACACAATCGTCTCTGCACTTTCAGCTTGTGCAAAACTTGGTGCCTTAGATGCTGGTTTAAGGATCCATAAATACCTTTCAAGCCATGGTTTCAAATTGAATCAAACGATTGGAACTGCAGTTGTGGATATGTATGCAAAATGTGGAAACATTGAGTCTGCAGGAGAGGTGTTTCGTGAAATAAAACAAAAGGGTCTTCTTACTTGGAGTGTTATGATCTGGGGCTGGGCTATCCATGGACATTTTAAGAAATCTATACAATACTTTGAATGGATGAAGTCTGCAGGTTTAACTTCATTTTGCGTTTGTTATTCTCTGAAGTTTATTCTTTGTTGTCCATAACTCAAAACTCGGTATGTTTGCAGGAACAAAGCCAGATGGGGTGGTGTTTCTAGCTGTTCTTACTGCTTGCTCACATTCTGGACAAGTAGACGATGGACTCGAGTTTTTCGACAGTATGAGGCGAGACTACTTGATTGAGCCTTCTATGAAGCATTACACTCTGATTGTAGACATGCTAGGAAGGGCTGGTAGACTAGATGAAGCTCTAAAGTTCATAAGAGACATGCCTATCAACCCTGATTTTGTGGTCTGGGGTGCTCTATTTTGTGCTTGCAGGGCTCATAAGAACATTAAAATGGCAGAATTAGCATCCGAAAAGCTTCTTGAGCTTGAACCGAAGCATCCGGGGAGTTACGTATTTTTGTCGAATGCATATGCTGCTGTAGGAAGATGGGAAGATGCAGAGAGAGTGAGAGTTTCTATGCGAGATCGAGGTGCACAAAAGGATCCAGGATGGAGCTTCATGGAAGTGGATGATAAGTTACATAGATTTGTGGCTGGTGATAATACTCATAACCGTGCCCAAGAGATATACTCGAAATTAGATGAGATAAATGCAGGTGCCAGGGAAAAAGGATACACAAAAGGAATTGAGTGTGTTCTTCATAACATTGAAGAGGAAGAGAAGGAAGAAGCACTGGGACATCACAGCGAGAAGTTGGCGCTTGCTTTCGGGCTCGTTAGTACAGCCCCGGAGACGACGATTAGGATAGTGAAAAACCTTAGAGTTTGTGTGGATTGTCATTCATTCATGAAATATGCAAGTAAAATGAGCCAGAGAGAGATCATTCTGCGGGATATGAAACGATTTCATCATTTTCATGATGGGGTTTGTTCATGTGGAGATTATTGGTAAAAGATTGTTGATCAGAGAAGGTGGAACTACTGATGCTTTTGTTACTGAGGTTGCCACTTATAGCTAA

mRNA sequence

ATGCTTCTTCTTCGACTGAATGGATATGGAACTGGAAGTAACAGAATGAAAAATCTCCTTGTTCTTTTCAAGCCAAGGATTGCCTTCTTCAATTCAACGTCTTCTTCATCATCACCTCAGATTTCGTCTCTGGAAACCCATTTCATCGATCTAATACATGCTTCCGATTCGACCCACAAGCTTCGTCAGATCCATGGTCAACTCTACCGCTGTAACATCTTCTCCAGCAGCCGGGTCGTGACCCAGTTCATCTCTTCGTGTTCTTCGCTAAATTCTGTCGACTATGCGGTTTTGATCTTCCAGCGGTTCGAGTTGAAGAATAGTTTCCTCTTCAATGCATTGATTCGAGGACTTGCTGAAAATTCCAGGTTCGAGAGCTCAATTTCTTACTTTGTTTGCATGCTCAGGTGGAAAATTAGCCCTGATAGGCTTACTTTTCCGTTTGTGCTAAAATCAGCGGCGGCTCTTTCCAATGGTGGCGTTGGGAGTGCTTTACATTCTGGGATTTTGAAATTTGGACTTGAGTTTGATTCTTTTGTGAGGGTTTCGTTGGTGGATATGTACGTGAAAGTTGACGATTTGGGTTCTGCCTTGAAGGTGTTTGATGAAAGTCCTGACAGAATTAAGAAGGGAAATGTGTTGATTTGGAATGTTCTTATTCATGGGTATTGTAGAGTGGGGAATTTGGTTAAAGCTACGGAGCTATTCGAGACAATGCCTGAGAAGGATACAGGTTCTTGGAATAGTTTGATTAATGGCTTCATGAGAAAGGGGCAGTTGGGTCCAGCACACGAACTGTTTGAGAAAATGCCTGAAAAGAATGTGGTTTCTTGGACTACAATGGTGAATGGATTTTCACAGAATGGAGACCCTGAAAAGGCATTGCAATTTTTCTTTTGTATGCTCGAAGAAGGCGCACGGCCGAACGATTACACAATCGTCTCTGCACTTTCAGCTTGTGCAAAACTTGGTGCCTTAGATGCTGGTTTAAGGATCCATAAATACCTTTCAAGCCATGGTTTCAAATTGAATCAAACGATTGGAACTGCAGTTGTGGATATGTATGCAAAATGTGGAAACATTGAGTCTGCAGGAGAGGTGTTTCGTGAAATAAAACAAAAGGGTCTTCTTACTTGGAGTGTTATGATCTGGGGCTGGGCTATCCATGGACATTTTAAGAAATCTATACAATACTTTGAATGGATGAAGTCTGCAGGAACAAAGCCAGATGGGGTGGTGTTTCTAGCTGTTCTTACTGCTTGCTCACATTCTGGACAAGTAGACGATGGACTCGAGTTTTTCGACAGTATGAGGCGAGACTACTTGATTGAGCCTTCTATGAAGCATTACACTCTGATTGTAGACATGCTAGGAAGGGCTGGTAGACTAGATGAAGCTCTAAAGTTCATAAGAGACATGCCTATCAACCCTGATTTTGTGGTCTGGGGTGCTCTATTTTGTGCTTGCAGGGCTCATAAGAACATTAAAATGGCAGAATTAGCATCCGAAAAGCTTCTTGAGCTTGAACCGAAGCATCCGGGGAGTTACGTATTTTTGTCGAATGCATATGCTGCTGTAGGAAGATGGGAAGATGCAGAGAGAGTGAGAGTTTCTATGCGAGATCGAGGTGCACAAAAGGATCCAGGATGGAGCTTCATGGAAGTGGATGATAAGTTACATAGATTTGTGGCTGGTGATAATACTCATAACCGTGCCCAAGAGATATACTCGAAATTAGATGAGATAAATGCAGGTGCCAGGGAAAAAGGATACACAAAAGGAATTGAGTGTGTTCTTCATAACATTGAAGAGGAAGAGAAGGAAGAAGCACTGGGACATCACAGCGAGAAGTTGGCGCTTGCTTTCGGGCTCGTTAGTACAGCCCCGGAGACGACGATTAGGATAGTGAAAAACCTTAGAATTATTGGTAAAAGATTGTTGATCAGAGAAGGTGGAACTACTGATGCTTTTGTTACTGAGGTTGCCACTTATAGCTAA

Coding sequence (CDS)

ATGCTTCTTCTTCGACTGAATGGATATGGAACTGGAAGTAACAGAATGAAAAATCTCCTTGTTCTTTTCAAGCCAAGGATTGCCTTCTTCAATTCAACGTCTTCTTCATCATCACCTCAGATTTCGTCTCTGGAAACCCATTTCATCGATCTAATACATGCTTCCGATTCGACCCACAAGCTTCGTCAGATCCATGGTCAACTCTACCGCTGTAACATCTTCTCCAGCAGCCGGGTCGTGACCCAGTTCATCTCTTCGTGTTCTTCGCTAAATTCTGTCGACTATGCGGTTTTGATCTTCCAGCGGTTCGAGTTGAAGAATAGTTTCCTCTTCAATGCATTGATTCGAGGACTTGCTGAAAATTCCAGGTTCGAGAGCTCAATTTCTTACTTTGTTTGCATGCTCAGGTGGAAAATTAGCCCTGATAGGCTTACTTTTCCGTTTGTGCTAAAATCAGCGGCGGCTCTTTCCAATGGTGGCGTTGGGAGTGCTTTACATTCTGGGATTTTGAAATTTGGACTTGAGTTTGATTCTTTTGTGAGGGTTTCGTTGGTGGATATGTACGTGAAAGTTGACGATTTGGGTTCTGCCTTGAAGGTGTTTGATGAAAGTCCTGACAGAATTAAGAAGGGAAATGTGTTGATTTGGAATGTTCTTATTCATGGGTATTGTAGAGTGGGGAATTTGGTTAAAGCTACGGAGCTATTCGAGACAATGCCTGAGAAGGATACAGGTTCTTGGAATAGTTTGATTAATGGCTTCATGAGAAAGGGGCAGTTGGGTCCAGCACACGAACTGTTTGAGAAAATGCCTGAAAAGAATGTGGTTTCTTGGACTACAATGGTGAATGGATTTTCACAGAATGGAGACCCTGAAAAGGCATTGCAATTTTTCTTTTGTATGCTCGAAGAAGGCGCACGGCCGAACGATTACACAATCGTCTCTGCACTTTCAGCTTGTGCAAAACTTGGTGCCTTAGATGCTGGTTTAAGGATCCATAAATACCTTTCAAGCCATGGTTTCAAATTGAATCAAACGATTGGAACTGCAGTTGTGGATATGTATGCAAAATGTGGAAACATTGAGTCTGCAGGAGAGGTGTTTCGTGAAATAAAACAAAAGGGTCTTCTTACTTGGAGTGTTATGATCTGGGGCTGGGCTATCCATGGACATTTTAAGAAATCTATACAATACTTTGAATGGATGAAGTCTGCAGGAACAAAGCCAGATGGGGTGGTGTTTCTAGCTGTTCTTACTGCTTGCTCACATTCTGGACAAGTAGACGATGGACTCGAGTTTTTCGACAGTATGAGGCGAGACTACTTGATTGAGCCTTCTATGAAGCATTACACTCTGATTGTAGACATGCTAGGAAGGGCTGGTAGACTAGATGAAGCTCTAAAGTTCATAAGAGACATGCCTATCAACCCTGATTTTGTGGTCTGGGGTGCTCTATTTTGTGCTTGCAGGGCTCATAAGAACATTAAAATGGCAGAATTAGCATCCGAAAAGCTTCTTGAGCTTGAACCGAAGCATCCGGGGAGTTACGTATTTTTGTCGAATGCATATGCTGCTGTAGGAAGATGGGAAGATGCAGAGAGAGTGAGAGTTTCTATGCGAGATCGAGGTGCACAAAAGGATCCAGGATGGAGCTTCATGGAAGTGGATGATAAGTTACATAGATTTGTGGCTGGTGATAATACTCATAACCGTGCCCAAGAGATATACTCGAAATTAGATGAGATAAATGCAGGTGCCAGGGAAAAAGGATACACAAAAGGAATTGAGTGTGTTCTTCATAACATTGAAGAGGAAGAGAAGGAAGAAGCACTGGGACATCACAGCGAGAAGTTGGCGCTTGCTTTCGGGCTCGTTAGTACAGCCCCGGAGACGACGATTAGGATAGTGAAAAACCTTAGAATTATTGGTAAAAGATTGTTGATCAGAGAAGGTGGAACTACTGATGCTTTTGTTACTGAGGTTGCCACTTATAGCTAA

Protein sequence

MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMPEKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNIESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRIIGKRLLIREGGTTDAFVTEVATYS
Homology
[Close]
BLAST of Carg11081 vs. NCBI nr
Match: KAG7026055.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1344.7 bits (3479), Expect = 0.0e+00
Identity = 665/665 (100.00%), Postives = 665/665 (100.00%), Query Frame = 0 

Query: 1   MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK 60
           MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK
Sbjct: 1   MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK 60

Query: 61  LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE 120
           LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE
Sbjct: 61  LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE 120

Query: 121 NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV 180
           NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV
Sbjct: 121 NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV 180

Query: 181 RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP 240
           RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP
Sbjct: 181 RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP 240

Query: 241 EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC 300
           EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC
Sbjct: 241 EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC 300

Query: 301 MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN 360
           MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN
Sbjct: 301 MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN 360

Query: 361 IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA 420
           IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA
Sbjct: 361 IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA 420

Query: 421 CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV 480
           CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV
Sbjct: 421 CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV 480

Query: 481 VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR 540
           VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR
Sbjct: 481 VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR 540

Query: 541 DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH 600
           DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH
Sbjct: 541 DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH 600

Query: 601 NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRIIGKRLLIREGGTTDAFVTE 660
           NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRIIGKRLLIREGGTTDAFVTE
Sbjct: 601 NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRIIGKRLLIREGGTTDAFVTE 660

Query: 661 VATYS 666
           VATYS
Sbjct: 661 VATYS 665

[Close]
BLAST of Carg11081 vs. NCBI nr
Match: KAG6593716.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1298.5 bits (3359), Expect = 0.0e+00
Identity = 640/641 (99.84%), Postives = 641/641 (100.00%), Query Frame = 0 

Query: 1   MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK 60
           MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK
Sbjct: 1   MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK 60

Query: 61  LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE 120
           LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE
Sbjct: 61  LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE 120

Query: 121 NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV 180
           NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV
Sbjct: 121 NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV 180

Query: 181 RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP 240
           RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP
Sbjct: 181 RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP 240

Query: 241 EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC 300
           EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC
Sbjct: 241 EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC 300

Query: 301 MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN 360
           MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN
Sbjct: 301 MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN 360

Query: 361 IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA 420
           IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA
Sbjct: 361 IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA 420

Query: 421 CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV 480
           CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV
Sbjct: 421 CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV 480

Query: 481 VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR 540
           VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR
Sbjct: 481 VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR 540

Query: 541 DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH 600
           DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH
Sbjct: 541 DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH 600

Query: 601 NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRI 642
           NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLR+
Sbjct: 601 NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRV 641

[Close]
BLAST of Carg11081 vs. NCBI nr
Match: XP_022964045.1 (pentatricopeptide repeat-containing protein At1g04840 [Cucurbita moschata])

HSP 1 Score: 1298.5 bits (3359), Expect = 0.0e+00
Identity = 640/641 (99.84%), Postives = 641/641 (100.00%), Query Frame = 0 

Query: 1   MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK 60
           MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK
Sbjct: 1   MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK 60

Query: 61  LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE 120
           LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE
Sbjct: 61  LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE 120

Query: 121 NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV 180
           NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV
Sbjct: 121 NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV 180

Query: 181 RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP 240
           RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP
Sbjct: 181 RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP 240

Query: 241 EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC 300
           EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC
Sbjct: 241 EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC 300

Query: 301 MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN 360
           MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN
Sbjct: 301 MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN 360

Query: 361 IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA 420
           IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA
Sbjct: 361 IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA 420

Query: 421 CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV 480
           CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV
Sbjct: 421 CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV 480

Query: 481 VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR 540
           VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR
Sbjct: 481 VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR 540

Query: 541 DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH 600
           DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH
Sbjct: 541 DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH 600

Query: 601 NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRI 642
           NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLR+
Sbjct: 601 NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRV 641

[Close]
BLAST of Carg11081 vs. NCBI nr
Match: XP_023513771.1 (pentatricopeptide repeat-containing protein At1g04840 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1267.3 bits (3278), Expect = 0.0e+00
Identity = 626/641 (97.66%), Postives = 635/641 (99.06%), Query Frame = 0 

Query: 1   MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK 60
           MLLLRLN  GTGSNRMKNL VLFKPRIAFFNSTSSSSSPQISS ETHFIDLIHASDSTHK
Sbjct: 1   MLLLRLN--GTGSNRMKNLHVLFKPRIAFFNSTSSSSSPQISSQETHFIDLIHASDSTHK 60

Query: 61  LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE 120
           LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE
Sbjct: 61  LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE 120

Query: 121 NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV 180
           NSRFESSI+YFVCMLRW+ISPDRLTFPFVLKSAAALSNGGVGSALHSGI+KFGLEFDSFV
Sbjct: 121 NSRFESSIAYFVCMLRWEISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFV 180

Query: 181 RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP 240
           RVSLVDMYVKVDDLGSALKVFDESPDRIKK NVLIWNVLIHGYCRVGNLVKATELFETMP
Sbjct: 181 RVSLVDMYVKVDDLGSALKVFDESPDRIKKENVLIWNVLIHGYCRVGNLVKATELFETMP 240

Query: 241 EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC 300
           +KDTGSWNSLINGFMRKGQLGPA+ELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC
Sbjct: 241 KKDTGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC 300

Query: 301 MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN 360
           MLEEGARPNDYTIVSALSACAKLGALDAGLRIH+YLSSHGFKLNQTIGTA+VDMYAKCGN
Sbjct: 301 MLEEGARPNDYTIVSALSACAKLGALDAGLRIHRYLSSHGFKLNQTIGTALVDMYAKCGN 360

Query: 361 IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA 420
           IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKS GTKPDGVVFLAVLTA
Sbjct: 361 IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSTGTKPDGVVFLAVLTA 420

Query: 421 CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV 480
           CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKF+RDMPINPDFV
Sbjct: 421 CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFLRDMPINPDFV 480

Query: 481 VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR 540
           VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR
Sbjct: 481 VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR 540

Query: 541 DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH 600
           DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH
Sbjct: 541 DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH 600

Query: 601 NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRI 642
           NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLR+
Sbjct: 601 NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRV 639

[Close]
BLAST of Carg11081 vs. NCBI nr
Match: XP_023000600.1 (pentatricopeptide repeat-containing protein At1g04840 [Cucurbita maxima])

HSP 1 Score: 1260.4 bits (3260), Expect = 0.0e+00
Identity = 623/640 (97.34%), Postives = 632/640 (98.75%), Query Frame = 0 

Query: 2   LLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHKL 61
           +LL LN  GTGSNRMKNL VLFKPRIAFFNSTSSSSSPQISSLET+FIDLIHASDSTHKL
Sbjct: 1   MLLLLN--GTGSNRMKNLHVLFKPRIAFFNSTSSSSSPQISSLETYFIDLIHASDSTHKL 60

Query: 62  RQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAEN 121
           RQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAEN
Sbjct: 61  RQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAEN 120

Query: 122 SRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFVR 181
           SRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGI+KFGLEFDSFVR
Sbjct: 121 SRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVR 180

Query: 182 VSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMPE 241
           VSLVDMYVKVDDLGSALKVFDESPDRIK+GNVLIWNVLIHGYCRVGNLVKATELFETMP+
Sbjct: 181 VSLVDMYVKVDDLGSALKVFDESPDRIKQGNVLIWNVLIHGYCRVGNLVKATELFETMPK 240

Query: 242 KDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCM 301
           KDTGSWNSLINGFMRKGQLGPA+ELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCM
Sbjct: 241 KDTGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCM 300

Query: 302 LEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNI 361
           LEEGA+PNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNI
Sbjct: 301 LEEGAQPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNI 360

Query: 362 ESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTAC 421
           ESAGEVF EIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKS GTKPDGVVFLAVLTAC
Sbjct: 361 ESAGEVFGEIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSTGTKPDGVVFLAVLTAC 420

Query: 422 SHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVV 481
           SHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVV
Sbjct: 421 SHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVV 480

Query: 482 WGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRD 541
           WGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRD
Sbjct: 481 WGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRD 540

Query: 542 RGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHN 601
           RGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINA AREKGYTKGIECVLHN
Sbjct: 541 RGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINASAREKGYTKGIECVLHN 600

Query: 602 IEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRI 642
           IEEEEKEEALGHHSEKLALAFGL+STAPET IRIVKNLR+
Sbjct: 601 IEEEEKEEALGHHSEKLALAFGLISTAPETMIRIVKNLRV 638

[Close]
BLAST of Carg11081 vs. ExPASy Swiss-Prot
Match: Q9MAT2 (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H64 PE=2 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 2.7e-195
Identity = 341/631 (54.04%), Postives = 451/631 (71.47%), Query Frame = 0 

Query: 16  MKNLLVLFKPRIAFFNSTSSSSSP---QISSLETHFIDLIHASDSTHKLRQIHGQLYRCN 75
           MK+L V+FKP+    +S +    P   Q S  E+HFI LIHA   T  LR +H Q+ R  
Sbjct: 1   MKSLSVIFKPK----SSPAKIYFPADRQASPDESHFISLIHACKDTASLRHVHAQILRRG 60

Query: 76  IFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFV 135
           +  SSRV  Q +S  S L S DY++ IF+  E +N F+ NALIRGL EN+RFESS+ +F+
Sbjct: 61  VL-SSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFI 120

Query: 136 CMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVD 195
            MLR  + PDRLTFPFVLKS + L    +G ALH+  LK  ++ DSFVR+SLVDMY K  
Sbjct: 121 LMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTG 180

Query: 196 DLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMPEKDTGSWNSLIN 255
            L  A +VF+ESPDRIKK ++LIWNVLI+GYCR  ++  AT LF +MPE+++GSW++LI 
Sbjct: 181 QLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIK 240

Query: 256 GFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYT 315
           G++  G+L  A +LFE MPEKNVVSWTT++NGFSQ GD E A+  +F MLE+G +PN+YT
Sbjct: 241 GYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYT 300

Query: 316 IVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNIESAGEVFREIK 375
           I + LSAC+K GAL +G+RIH Y+  +G KL++ IGTA+VDMYAKCG ++ A  VF  + 
Sbjct: 301 IAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN 360

Query: 376 QKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDDGLE 435
            K +L+W+ MI GWA+HG F ++IQ F  M  +G KPD VVFLAVLTAC +S +VD GL 
Sbjct: 361 HKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLN 420

Query: 436 FFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCACRAH 495
           FFDSMR DY IEP++KHY L+VD+LGRAG+L+EA + + +MPINPD   W AL+ AC+AH
Sbjct: 421 FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 480

Query: 496 KNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPGWSF 555
           K  + AE  S+ LLEL+P+  GSY+FL   +A+ G  +D E+ R+S++ R  ++  GWS+
Sbjct: 481 KGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSY 540

Query: 556 MEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEEKEEALG 615
           +E+D +L++F AGD +H   QEI  KLDEI + A +KGY  G +  +H+IEEEEKE   G
Sbjct: 541 IELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTG 600

Query: 616 HHSEKLALAFGLVSTAPETTIRIVKNLRIIG 644
            HSEKLAL  G + TAP TTIRI+KNLRI G
Sbjct: 601 IHSEKLALTLGFLRTAPGTTIRIIKNLRICG 626

[Close]
BLAST of Carg11081 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 3.1e-127
Identity = 251/684 (36.70%), Postives = 376/684 (54.97%), Query Frame = 0 

Query: 30  FNSTSSSSSPQISSLETH-FIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQFISSC- 89
           F+   SSS P   S+  H  + L+H   +   LR IH Q+ +  + +++  +++ I  C 
Sbjct: 17  FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 76

Query: 90  --SSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFVCMLRWKISPDRLT 149
                  + YA+ +F+  +  N  ++N + RG A +S   S++  +VCM+   + P+  T
Sbjct: 77  LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136

Query: 150 FPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESP 209
           FPFVLKS A       G  +H  +LK G + D +V  SL+ MYV+   L  A KVFD+SP
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196

Query: 210 ---------------------------DRIKKGNVLIWNVLIHGYCRVGNLVKATELFET 269
                                      D I   +V+ WN +I GY   GN  +A ELF+ 
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256

Query: 270 M------PEKDT-----------GS---------W-------------NSLINGFMRKGQ 329
           M      P++ T           GS         W             N+LI+ + + G+
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316

Query: 330 LGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYTIVSALSA 389
           L  A  LFE++P K+V+SW T++ G++     ++AL  F  ML  G  PND T++S L A
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376

Query: 390 CAKLGALDAGLRIHKYLSSH--GFKLNQTIGTAVVDMYAKCGNIESAGEVFREIKQKGLL 449
           CA LGA+D G  IH Y+     G     ++ T+++DMYAKCG+IE+A +VF  I  K L 
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436

Query: 450 TWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDDGLEFFDSM 509
           +W+ MI+G+A+HG    S   F  M+  G +PD + F+ +L+ACSHSG +D G   F +M
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496

Query: 510 RRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCACRAHKNIKM 569
            +DY + P ++HY  ++D+LG +G   EA + I  M + PD V+W +L  AC+ H N+++
Sbjct: 497 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 556

Query: 570 AELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPGWSFMEVDD 629
            E  +E L+++EP++PGSYV LSN YA+ GRW +  + R  + D+G +K PG S +E+D 
Sbjct: 557 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616

Query: 630 KLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEEKEEALGHHSEK 642
            +H F+ GD  H R +EIY  L+E+     + G+      VL  +EEE KE AL HHSEK
Sbjct: 617 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEK 676

[Close]
BLAST of Carg11081 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 4.2e-124
Identity = 245/685 (35.77%), Postives = 373/685 (54.45%), Query Frame = 0 

Query: 34  SSSSSPQISSLETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQF--ISSCSSLN 93
           S+ + P  ++  +  I LI    S  +L+Q HG + R   FS     ++   +++ SS  
Sbjct: 19  SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78

Query: 94  SVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFVCML-RWKISPDRLTFPFVL 153
           S++YA  +F      NSF +N LIR  A       SI  F+ M+   +  P++ TFPF++
Sbjct: 79  SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138

Query: 154 KSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESPDRIKK 213
           K+AA +S+  +G +LH   +K  +  D FV  SL+  Y    DL SA KVF      IK+
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF----TTIKE 198

Query: 214 GNVLIWNVLIHG------------------------------------------------ 273
            +V+ WN +I+G                                                
Sbjct: 199 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 258

Query: 274 ----------------------YCRVGNLVKATELFETMPEKDTGSWNSLINGFMRKGQL 333
                                 Y + G++  A  LF+ M EKD  +W ++++G+      
Sbjct: 259 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 318

Query: 334 GPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFF-CMLEEGARPNDYTIVSALSA 393
             A E+   MP+K++V+W  +++ + QNG P +AL  F    L++  + N  T+VS LSA
Sbjct: 319 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 378

Query: 394 CAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNIESAGEVFREIKQKGLLTW 453
           CA++GAL+ G  IH Y+  HG ++N  + +A++ MY+KCG++E + EVF  ++++ +  W
Sbjct: 379 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 438

Query: 454 SVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDDGLEFFDSMRR 513
           S MI G A+HG   +++  F  M+ A  KP+GV F  V  ACSH+G VD+    F  M  
Sbjct: 439 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 498

Query: 514 DYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCACRAHKNIKMAE 573
           +Y I P  KHY  IVD+LGR+G L++A+KFI  MPI P   VWGAL  AC+ H N+ +AE
Sbjct: 499 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 558

Query: 574 LASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPGWSFMEVDDKL 633
           +A  +LLELEP++ G++V LSN YA +G+WE+   +R  MR  G +K+PG S +E+D  +
Sbjct: 559 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 618

Query: 634 HRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEE-KEEALGHHSEKL 644
           H F++GDN H  ++++Y KL E+    +  GY   I  VL  IEEEE KE++L  HSEKL
Sbjct: 619 HEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKL 678

[Close]
BLAST of Carg11081 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 1.8e-119
Identity = 233/615 (37.89%), Postives = 356/615 (57.89%), Query Frame = 0 

Query: 31  NSTSSSSSPQISSLETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQFISSCSSL 90
           N  S S S + +  ET  +  +       +L+QIH ++ +  +   S  +T+F+S C S 
Sbjct: 2   NVISCSFSLEHNLYET--MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISS 61

Query: 91  NSVD---YAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFVCMLRWKISPDRLTFP 150
            S D   YA ++F  F+  ++FL+N +IRG + +   E S+  +  ML      +  TFP
Sbjct: 62  TSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFP 121

Query: 151 FVLKSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESPDR 210
            +LK+ + LS     + +H+ I K G E D                              
Sbjct: 122 SLLKACSNLSAFEETTQIHAQITKLGYEND------------------------------ 181

Query: 211 IKKGNVLIWNVLIHGYCRVGNLVKATELFETMPEKDTGSWNSLINGFMRKGQLGPAHELF 270
                V   N LI+ Y   GN   A  LF+ +PE D  SWNS+I G+++ G++  A  LF
Sbjct: 182 -----VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 241

Query: 271 EKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYTIVSALSACAKLGALD 330
            KM EKN +SWTTM++G+ Q    ++ALQ F  M      P++ ++ +ALSACA+LGAL+
Sbjct: 242 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 301

Query: 331 AGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNIESAGEVFREIKQKGLLTWSVMIWGWA 390
            G  IH YL+    +++  +G  ++DMYAKCG +E A EVF+ IK+K +  W+ +I G+A
Sbjct: 302 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 361

Query: 391 IHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDDGLEFFDSMRRDYLIEPSM 450
            HGH +++I  F  M+  G KP+ + F AVLTACS++G V++G   F SM RDY ++P++
Sbjct: 362 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 421

Query: 451 KHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCACRAHKNIKMAELASEKLLE 510
           +HY  IVD+LGRAG LDEA +FI++MP+ P+ V+WGAL  ACR HKNI++ E   E L+ 
Sbjct: 422 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 481

Query: 511 LEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPGWSFMEVDDKLHRFVAGDN 570
           ++P H G YV  +N +A   +W+ A   R  M+++G  K PG S + ++   H F+AGD 
Sbjct: 482 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDR 541

Query: 571 THNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEEKEEALGH-HSEKLALAFGLVS 630
           +H   ++I SK   +     E GY   +E +L ++ ++++ EA+ H HSEKLA+ +GL+ 
Sbjct: 542 SHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIK 579

Query: 631 TAPETTIRIVKNLRI 642
           T P T IRI+KNLR+
Sbjct: 602 TKPGTIIRIMKNLRV 579

[Close]
BLAST of Carg11081 vs. ExPASy Swiss-Prot
Match: Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.3e-117
Identity = 228/650 (35.08%), Postives = 359/650 (55.23%), Query Frame = 0 

Query: 33  TSSSSSPQISSLETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQFISSCSSLNS 92
           T  S++ ++  ++T    LI  + + + L+QIH  L   ++   + +V   +        
Sbjct: 5   TVPSATSKVQQIKT----LISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ 64

Query: 93  VDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFVCMLRWKISPDRLTFPFVLKS 152
             Y+ L+F   +  N FL+N+LI G   N  F  ++  F+ + +  +     TFP VLK+
Sbjct: 65  TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 124

Query: 153 AAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESPDRIKKGN 212
               S+  +G  LHS ++K G   D     SL+ +Y     L  A K+FDE PDR    +
Sbjct: 125 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----S 184

Query: 213 VLIWNVLIHGYCRVGNLVKATELFETMPEK----------------------DTGSW--- 272
           V+ W  L  GY   G   +A +LF+ M E                       D+G W   
Sbjct: 185 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 244

Query: 273 --------------NSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEK 332
                          +L+N + + G++  A  +F+ M EK++V+W+TM+ G++ N  P++
Sbjct: 245 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 304

Query: 333 ALQFFFCMLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVD 392
            ++ F  ML+E  +P+ ++IV  LS+CA LGALD G      +  H F  N  +  A++D
Sbjct: 305 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 364

Query: 393 MYAKCGNIESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVV 452
           MYAKCG +    EVF+E+K+K ++  +  I G A +GH K S   F   +  G  PDG  
Sbjct: 365 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 424

Query: 453 FLAVLTACSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDM 512
           FL +L  C H+G + DGL FF+++   Y ++ +++HY  +VD+ GRAG LD+A + I DM
Sbjct: 425 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 484

Query: 513 PINPDFVVWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAE 572
           P+ P+ +VWGAL   CR  K+ ++AE   ++L+ LEP + G+YV LSN Y+  GRW++A 
Sbjct: 485 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 544

Query: 573 RVRVSMRDRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTK 632
            VR  M  +G +K PG+S++E++ K+H F+A D +H  + +IY+KL+++    R  G+  
Sbjct: 545 EVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP 604

Query: 633 GIECVLHNIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRIIG 644
             E V  ++EEEEKE  LG+HSEKLA+A GL+ST     IR+VKNLR+ G
Sbjct: 605 TTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCG 646

[Close]
BLAST of Carg11081 vs. ExPASy TrEMBL
Match: A0A6J1HJP9 (pentatricopeptide repeat-containing protein At1g04840 OS=Cucurbita moschata OX=3662 GN=LOC111464188 PE=3 SV=1)

HSP 1 Score: 1298.5 bits (3359), Expect = 0.0e+00
Identity = 640/641 (99.84%), Postives = 641/641 (100.00%), Query Frame = 0 

Query: 1   MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK 60
           MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK
Sbjct: 1   MLLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHK 60

Query: 61  LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE 120
           LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE
Sbjct: 61  LRQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAE 120

Query: 121 NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV 180
           NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV
Sbjct: 121 NSRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFV 180

Query: 181 RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP 240
           RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP
Sbjct: 181 RVSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMP 240

Query: 241 EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC 300
           EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC
Sbjct: 241 EKDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFC 300

Query: 301 MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN 360
           MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN
Sbjct: 301 MLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGN 360

Query: 361 IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA 420
           IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA
Sbjct: 361 IESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTA 420

Query: 421 CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV 480
           CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV
Sbjct: 421 CSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFV 480

Query: 481 VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR 540
           VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR
Sbjct: 481 VWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMR 540

Query: 541 DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH 600
           DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH
Sbjct: 541 DRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLH 600

Query: 601 NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRI 642
           NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLR+
Sbjct: 601 NIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRV 641

[Close]
BLAST of Carg11081 vs. ExPASy TrEMBL
Match: A0A6J1KIT8 (pentatricopeptide repeat-containing protein At1g04840 OS=Cucurbita maxima OX=3661 GN=LOC111494840 PE=3 SV=1)

HSP 1 Score: 1260.4 bits (3260), Expect = 0.0e+00
Identity = 623/640 (97.34%), Postives = 632/640 (98.75%), Query Frame = 0 

Query: 2   LLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHKL 61
           +LL LN  GTGSNRMKNL VLFKPRIAFFNSTSSSSSPQISSLET+FIDLIHASDSTHKL
Sbjct: 1   MLLLLN--GTGSNRMKNLHVLFKPRIAFFNSTSSSSSPQISSLETYFIDLIHASDSTHKL 60

Query: 62  RQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAEN 121
           RQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAEN
Sbjct: 61  RQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAEN 120

Query: 122 SRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFVR 181
           SRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGI+KFGLEFDSFVR
Sbjct: 121 SRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGIVKFGLEFDSFVR 180

Query: 182 VSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMPE 241
           VSLVDMYVKVDDLGSALKVFDESPDRIK+GNVLIWNVLIHGYCRVGNLVKATELFETMP+
Sbjct: 181 VSLVDMYVKVDDLGSALKVFDESPDRIKQGNVLIWNVLIHGYCRVGNLVKATELFETMPK 240

Query: 242 KDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCM 301
           KDTGSWNSLINGFMRKGQLGPA+ELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCM
Sbjct: 241 KDTGSWNSLINGFMRKGQLGPANELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCM 300

Query: 302 LEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNI 361
           LEEGA+PNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNI
Sbjct: 301 LEEGAQPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNI 360

Query: 362 ESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTAC 421
           ESAGEVF EIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKS GTKPDGVVFLAVLTAC
Sbjct: 361 ESAGEVFGEIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSTGTKPDGVVFLAVLTAC 420

Query: 422 SHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVV 481
           SHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVV
Sbjct: 421 SHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVV 480

Query: 482 WGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRD 541
           WGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRD
Sbjct: 481 WGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRD 540

Query: 542 RGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHN 601
           RGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINA AREKGYTKGIECVLHN
Sbjct: 541 RGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINASAREKGYTKGIECVLHN 600

Query: 602 IEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRI 642
           IEEEEKEEALGHHSEKLALAFGL+STAPET IRIVKNLR+
Sbjct: 601 IEEEEKEEALGHHSEKLALAFGLISTAPETMIRIVKNLRV 638

[Close]
BLAST of Carg11081 vs. ExPASy TrEMBL
Match: A0A6J1C9L2 (pentatricopeptide repeat-containing protein At1g04840 OS=Momordica charantia OX=3673 GN=LOC111009584 PE=3 SV=1)

HSP 1 Score: 1137.1 bits (2940), Expect = 0.0e+00
Identity = 552/626 (88.18%), Postives = 591/626 (94.41%), Query Frame = 0 

Query: 16  MKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHKLRQIHGQLYRCNIFS 75
           MK+L VL KP +AFFNS  SSSS Q+ SLETHFIDLIHAS++ HKLRQIH QL+RCNIFS
Sbjct: 1   MKDLHVLLKPSLAFFNSMPSSSSSQVQSLETHFIDLIHASNTAHKLRQIHAQLFRCNIFS 60

Query: 76  SSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFVCML 135
           SSRVVTQFISSCSSLN VDYA+ IFQRFE+KNSFLFNALIRGLAENSRFE SI YFV ML
Sbjct: 61  SSRVVTQFISSCSSLNLVDYAISIFQRFEMKNSFLFNALIRGLAENSRFEGSIYYFVLML 120

Query: 136 RWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVDDLG 195
           +WKISPDRLTFPFVLKSAAALS+GGVG ALH GILKFGLEFDSFVRVSLVDMYVKV+DL 
Sbjct: 121 KWKISPDRLTFPFVLKSAAALSSGGVGRALHGGILKFGLEFDSFVRVSLVDMYVKVEDLS 180

Query: 196 SALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMPEKDTGSWNSLINGFM 255
           SALKVFDESPDRIK G+VLIWNVLIHGYCRVG+LVKATELFETMP+KDTGSWNSLINGFM
Sbjct: 181 SALKVFDESPDRIKNGSVLIWNVLIHGYCRVGDLVKATELFETMPKKDTGSWNSLINGFM 240

Query: 256 RKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYTIVS 315
           RKG LG A ELFE+MPEKNVVSWTTMVNGFSQNGDPEKAL+ F CMLEEGA+PNDYTIVS
Sbjct: 241 RKGDLGRAKELFERMPEKNVVSWTTMVNGFSQNGDPEKALETFSCMLEEGAQPNDYTIVS 300

Query: 316 ALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNIESAGEVFREIKQKG 375
           ALSACAK+GALDAGLRIH YLSS+GF+LN TIGTA+VDMYAKCGNIESAGEVF E K+KG
Sbjct: 301 ALSACAKVGALDAGLRIHNYLSSNGFRLNLTIGTALVDMYAKCGNIESAGEVFCETKEKG 360

Query: 376 LLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDDGLEFFD 435
           LLTWSVMIWGWAIHGHFKK+I YFEWMKS G KPDGVVFLAVLT+CSHSG+V+DGL+FFD
Sbjct: 361 LLTWSVMIWGWAIHGHFKKAILYFEWMKSTGMKPDGVVFLAVLTSCSHSGKVNDGLKFFD 420

Query: 436 SMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCACRAHKNI 495
           SMRRDYLIEPSMKHYTL+VDMLGRAGRLDEAL FIR+MPINPDFVVWGALFCACRAHKNI
Sbjct: 421 SMRRDYLIEPSMKHYTLVVDMLGRAGRLDEALNFIRNMPINPDFVVWGALFCACRAHKNI 480

Query: 496 KMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPGWSFMEV 555
           +MAELASEKLLELEPKHPGSYVFLSNAYAAVGRW+DAERVR+SMRDRGAQKDPGWSF+EV
Sbjct: 481 EMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWDDAERVRISMRDRGAQKDPGWSFIEV 540

Query: 556 DDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEEKEEALGHHS 615
           DDKLHRFVAGD THNRA+EIYS+LDEI+AGAREKGYT GIECVLHNIEEEEKE+ALGHHS
Sbjct: 541 DDKLHRFVAGDKTHNRAREIYSRLDEISAGAREKGYTSGIECVLHNIEEEEKEDALGHHS 600

Query: 616 EKLALAFGLVSTAPETTIRIVKNLRI 642
           EKLALAFGL+ST P TTIRIVKNLR+
Sbjct: 601 EKLALAFGLISTTPGTTIRIVKNLRV 626

[Close]
BLAST of Carg11081 vs. ExPASy TrEMBL
Match: A0A0A0LI86 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G139850 PE=3 SV=1)

HSP 1 Score: 1119.0 bits (2893), Expect = 0.0e+00
Identity = 545/640 (85.16%), Postives = 593/640 (92.66%), Query Frame = 0 

Query: 2   LLLRLNGYGTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHKL 61
           +LLR N  G+GSN MK+L VLF PRIAFF+S  SSSSP IS LETHFIDLIHAS+STHKL
Sbjct: 1   MLLRRN--GSGSNIMKDLHVLFNPRIAFFSSMFSSSSPPISFLETHFIDLIHASNSTHKL 60

Query: 62  RQIHGQLYRCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAEN 121
           RQIHGQLYRCN+FSSSRVVTQFISSCSSLNSVDYA+ IFQRFELKNS+LFNALIRGLAEN
Sbjct: 61  RQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAEN 120

Query: 122 SRFESSISYFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFVR 181
           SRFESSIS+FV ML+WKISPDRLTFPFVLKSAAALSNGGVG ALH GILKFGLEFDSFVR
Sbjct: 121 SRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVR 180

Query: 182 VSLVDMYVKVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMPE 241
           VSLVDMYVKV++LGSALKVFDESP+ +K G+VLIWNVLIHGYCR+G+LVKATELF++MP+
Sbjct: 181 VSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPK 240

Query: 242 KDTGSWNSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCM 301
           KDTGSWNSLINGFM+ G +G A ELF KMPEKNVVSWTTMVNGFSQNGDPEKAL+ FFCM
Sbjct: 241 KDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCM 300

Query: 302 LEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNI 361
           LEEGARPNDYTIVSALSACAK+GALDAGLRIH YLS +GFKLN  IGTA+VDMYAKCGNI
Sbjct: 301 LEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNI 360

Query: 362 ESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTAC 421
           E A +VF E K+KGLL WSVMIWGWAIHGHF+K++QYFEWMK  GTKPD VVFLAVL AC
Sbjct: 361 EHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNAC 420

Query: 422 SHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVV 481
           SHSGQV++GL+FFD+MRR YLIEPSMKHYTL+VDMLGRAGRLDEALKFIR MPI PDFVV
Sbjct: 421 SHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVV 480

Query: 482 WGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRD 541
           WGALFCACR HKN++MAELAS+KLL+LEPKHPGSYVFLSNAYA+VGRW+DAERVRVSMRD
Sbjct: 481 WGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRD 540

Query: 542 RGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHN 601
            GA KDPGWSF+EVD KLHRFVAGDNTHNRA EIYSKLDEI+A AREKGYTK IECVLHN
Sbjct: 541 HGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLDEISASAREKGYTKEIECVLHN 600

Query: 602 IEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRI 642
           IEEEEKEEALG+HSEKLALAFG+VST P TT+RIVKNLR+
Sbjct: 601 IEEEEKEEALGYHSEKLALAFGIVSTRPGTTVRIVKNLRV 638

[Close]
BLAST of Carg11081 vs. ExPASy TrEMBL
Match: A0A5A7SRY4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00910 PE=3 SV=1)

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 537/632 (84.97%), Postives = 585/632 (92.56%), Query Frame = 0 

Query: 10  GTGSNRMKNLLVLFKPRIAFFNSTSSSSSPQISSLETHFIDLIHASDSTHKLRQIHGQLY 69
           GTGSN MK+L VLF PRIAF +S  SSSS +ISSLETHFIDLIHAS+STHKLRQIHGQLY
Sbjct: 7   GTGSNIMKDLHVLFNPRIAFLSSMFSSSSLRISSLETHFIDLIHASNSTHKLRQIHGQLY 66

Query: 70  RCNIFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSIS 129
           RCN+FSSSRVVTQFISSCS LN+VDYAV IFQRFELKNS+LFNALIRGLAENSRFESSIS
Sbjct: 67  RCNVFSSSRVVTQFISSCSLLNAVDYAVSIFQRFELKNSYLFNALIRGLAENSRFESSIS 126

Query: 130 YFVCMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYV 189
           +FV ML+WKISPDRLTFPFVLKSAAALSNGGVG ALH GILKFGL FDSFVRVSLVDMYV
Sbjct: 127 FFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLVFDSFVRVSLVDMYV 186

Query: 190 KVDDLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMPEKDTGSWNS 249
           KV +LGSALKVFDESP+ +K G+VLIWNVLIHGYCR+G+LVKATELF++MP+KDTGSWNS
Sbjct: 187 KVGELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTGSWNS 246

Query: 250 LINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPN 309
           LINGFM+ G +G A ELFEKMPEKNVVSWTTMVNGFSQNGDP+KAL+ FFCMLEEGARPN
Sbjct: 247 LINGFMKMGDMGRAKELFEKMPEKNVVSWTTMVNGFSQNGDPQKALETFFCMLEEGARPN 306

Query: 310 DYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNIESAGEVFR 369
           DYTIVSALSACAK+GALDAGL IH YLS +GFKLN  IGTA+VDM+AKCGNIE A +VF 
Sbjct: 307 DYTIVSALSACAKIGALDAGLSIHNYLSGNGFKLNLVIGTALVDMHAKCGNIEYAEKVFH 366

Query: 370 EIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDD 429
           E K+KGLL WSVMIWGWAIHGHF+K++QYFEWMK  GTKPD VVFLAVL ACSHSGQV++
Sbjct: 367 ETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNE 426

Query: 430 GLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCAC 489
           GL+FFDSMRR YLIEPSMKHYTL+VDMLGRAGRLDEALKFIR MPI PDFVVWGALFCAC
Sbjct: 427 GLKFFDSMRRSYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCAC 486

Query: 490 RAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPG 549
           RAHKN++MAELASEKLL+LEPKHPGSYVFLSNAYA+VGRW+DAERVRVSMRD GA KDPG
Sbjct: 487 RAHKNVEMAELASEKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDSGAHKDPG 546

Query: 550 WSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEEKEE 609
           WSF+EVD KLHRFVAGDNTH+RA EIYS LDEI+A AREKGYTK IECVLHNIEEEEKEE
Sbjct: 547 WSFIEVDHKLHRFVAGDNTHSRAVEIYSMLDEISASAREKGYTKEIECVLHNIEEEEKEE 606

Query: 610 ALGHHSEKLALAFGLVSTAPETTIRIVKNLRI 642
           ALG+HSEKLALAFG++ST P TT+RIVKNLR+
Sbjct: 607 ALGYHSEKLALAFGILSTRPGTTVRIVKNLRV 638

[Close]
BLAST of Carg11081 vs. TAIR 10
Match: AT1G04840.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 683.3 bits (1762), Expect = 1.9e-196
Identity = 341/631 (54.04%), Postives = 451/631 (71.47%), Query Frame = 0 

Query: 16  MKNLLVLFKPRIAFFNSTSSSSSP---QISSLETHFIDLIHASDSTHKLRQIHGQLYRCN 75
           MK+L V+FKP+    +S +    P   Q S  E+HFI LIHA   T  LR +H Q+ R  
Sbjct: 1   MKSLSVIFKPK----SSPAKIYFPADRQASPDESHFISLIHACKDTASLRHVHAQILRRG 60

Query: 76  IFSSSRVVTQFISSCSSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFV 135
           +  SSRV  Q +S  S L S DY++ IF+  E +N F+ NALIRGL EN+RFESS+ +F+
Sbjct: 61  VL-SSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFI 120

Query: 136 CMLRWKISPDRLTFPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVD 195
            MLR  + PDRLTFPFVLKS + L    +G ALH+  LK  ++ DSFVR+SLVDMY K  
Sbjct: 121 LMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTG 180

Query: 196 DLGSALKVFDESPDRIKKGNVLIWNVLIHGYCRVGNLVKATELFETMPEKDTGSWNSLIN 255
            L  A +VF+ESPDRIKK ++LIWNVLI+GYCR  ++  AT LF +MPE+++GSW++LI 
Sbjct: 181 QLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIK 240

Query: 256 GFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYT 315
           G++  G+L  A +LFE MPEKNVVSWTT++NGFSQ GD E A+  +F MLE+G +PN+YT
Sbjct: 241 GYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYT 300

Query: 316 IVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNIESAGEVFREIK 375
           I + LSAC+K GAL +G+RIH Y+  +G KL++ IGTA+VDMYAKCG ++ A  VF  + 
Sbjct: 301 IAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN 360

Query: 376 QKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDDGLE 435
            K +L+W+ MI GWA+HG F ++IQ F  M  +G KPD VVFLAVLTAC +S +VD GL 
Sbjct: 361 HKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLN 420

Query: 436 FFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCACRAH 495
           FFDSMR DY IEP++KHY L+VD+LGRAG+L+EA + + +MPINPD   W AL+ AC+AH
Sbjct: 421 FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 480

Query: 496 KNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPGWSF 555
           K  + AE  S+ LLEL+P+  GSY+FL   +A+ G  +D E+ R+S++ R  ++  GWS+
Sbjct: 481 KGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSY 540

Query: 556 MEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEEKEEALG 615
           +E+D +L++F AGD +H   QEI  KLDEI + A +KGY  G +  +H+IEEEEKE   G
Sbjct: 541 IELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTG 600

Query: 616 HHSEKLALAFGLVSTAPETTIRIVKNLRIIG 644
            HSEKLAL  G + TAP TTIRI+KNLRI G
Sbjct: 601 IHSEKLALTLGFLRTAPGTTIRIIKNLRICG 626

[Close]
BLAST of Carg11081 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 457.2 bits (1175), Expect = 2.2e-128
Identity = 251/684 (36.70%), Postives = 376/684 (54.97%), Query Frame = 0 

Query: 30  FNSTSSSSSPQISSLETH-FIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQFISSC- 89
           F+   SSS P   S+  H  + L+H   +   LR IH Q+ +  + +++  +++ I  C 
Sbjct: 17  FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 76

Query: 90  --SSLNSVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFVCMLRWKISPDRLT 149
                  + YA+ +F+  +  N  ++N + RG A +S   S++  +VCM+   + P+  T
Sbjct: 77  LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136

Query: 150 FPFVLKSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESP 209
           FPFVLKS A       G  +H  +LK G + D +V  SL+ MYV+   L  A KVFD+SP
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196

Query: 210 ---------------------------DRIKKGNVLIWNVLIHGYCRVGNLVKATELFET 269
                                      D I   +V+ WN +I GY   GN  +A ELF+ 
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256

Query: 270 M------PEKDT-----------GS---------W-------------NSLINGFMRKGQ 329
           M      P++ T           GS         W             N+LI+ + + G+
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316

Query: 330 LGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYTIVSALSA 389
           L  A  LFE++P K+V+SW T++ G++     ++AL  F  ML  G  PND T++S L A
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376

Query: 390 CAKLGALDAGLRIHKYLSSH--GFKLNQTIGTAVVDMYAKCGNIESAGEVFREIKQKGLL 449
           CA LGA+D G  IH Y+     G     ++ T+++DMYAKCG+IE+A +VF  I  K L 
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436

Query: 450 TWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDDGLEFFDSM 509
           +W+ MI+G+A+HG    S   F  M+  G +PD + F+ +L+ACSHSG +D G   F +M
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496

Query: 510 RRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCACRAHKNIKM 569
            +DY + P ++HY  ++D+LG +G   EA + I  M + PD V+W +L  AC+ H N+++
Sbjct: 497 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 556

Query: 570 AELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPGWSFMEVDD 629
            E  +E L+++EP++PGSYV LSN YA+ GRW +  + R  + D+G +K PG S +E+D 
Sbjct: 557 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616

Query: 630 KLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEEKEEALGHHSEK 642
            +H F+ GD  H R +EIY  L+E+     + G+      VL  +EEE KE AL HHSEK
Sbjct: 617 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEK 676

[Close]
BLAST of Carg11081 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 446.8 bits (1148), Expect = 3.0e-125
Identity = 245/685 (35.77%), Postives = 373/685 (54.45%), Query Frame = 0 

Query: 34  SSSSSPQISSLETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQF--ISSCSSLN 93
           S+ + P  ++  +  I LI    S  +L+Q HG + R   FS     ++   +++ SS  
Sbjct: 19  SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78

Query: 94  SVDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFVCML-RWKISPDRLTFPFVL 153
           S++YA  +F      NSF +N LIR  A       SI  F+ M+   +  P++ TFPF++
Sbjct: 79  SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138

Query: 154 KSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESPDRIKK 213
           K+AA +S+  +G +LH   +K  +  D FV  SL+  Y    DL SA KVF      IK+
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF----TTIKE 198

Query: 214 GNVLIWNVLIHG------------------------------------------------ 273
            +V+ WN +I+G                                                
Sbjct: 199 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQV 258

Query: 274 ----------------------YCRVGNLVKATELFETMPEKDTGSWNSLINGFMRKGQL 333
                                 Y + G++  A  LF+ M EKD  +W ++++G+      
Sbjct: 259 CSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDY 318

Query: 334 GPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEKALQFFF-CMLEEGARPNDYTIVSALSA 393
             A E+   MP+K++V+W  +++ + QNG P +AL  F    L++  + N  T+VS LSA
Sbjct: 319 EAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSA 378

Query: 394 CAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNIESAGEVFREIKQKGLLTW 453
           CA++GAL+ G  IH Y+  HG ++N  + +A++ MY+KCG++E + EVF  ++++ +  W
Sbjct: 379 CAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVW 438

Query: 454 SVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDDGLEFFDSMRR 513
           S MI G A+HG   +++  F  M+ A  KP+GV F  V  ACSH+G VD+    F  M  
Sbjct: 439 SAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMES 498

Query: 514 DYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCACRAHKNIKMAE 573
           +Y I P  KHY  IVD+LGR+G L++A+KFI  MPI P   VWGAL  AC+ H N+ +AE
Sbjct: 499 NYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 558

Query: 574 LASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPGWSFMEVDDKL 633
           +A  +LLELEP++ G++V LSN YA +G+WE+   +R  MR  G +K+PG S +E+D  +
Sbjct: 559 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 618

Query: 634 HRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEE-KEEALGHHSEKL 644
           H F++GDN H  ++++Y KL E+    +  GY   I  VL  IEEEE KE++L  HSEKL
Sbjct: 619 HEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKL 678

[Close]
BLAST of Carg11081 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 431.4 bits (1108), Expect = 1.3e-120
Identity = 233/615 (37.89%), Postives = 356/615 (57.89%), Query Frame = 0 

Query: 31  NSTSSSSSPQISSLETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQFISSCSSL 90
           N  S S S + +  ET  +  +       +L+QIH ++ +  +   S  +T+F+S C S 
Sbjct: 2   NVISCSFSLEHNLYET--MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISS 61

Query: 91  NSVD---YAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFVCMLRWKISPDRLTFP 150
            S D   YA ++F  F+  ++FL+N +IRG + +   E S+  +  ML      +  TFP
Sbjct: 62  TSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFP 121

Query: 151 FVLKSAAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESPDR 210
            +LK+ + LS     + +H+ I K G E D                              
Sbjct: 122 SLLKACSNLSAFEETTQIHAQITKLGYEND------------------------------ 181

Query: 211 IKKGNVLIWNVLIHGYCRVGNLVKATELFETMPEKDTGSWNSLINGFMRKGQLGPAHELF 270
                V   N LI+ Y   GN   A  LF+ +PE D  SWNS+I G+++ G++  A  LF
Sbjct: 182 -----VYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLF 241

Query: 271 EKMPEKNVVSWTTMVNGFSQNGDPEKALQFFFCMLEEGARPNDYTIVSALSACAKLGALD 330
            KM EKN +SWTTM++G+ Q    ++ALQ F  M      P++ ++ +ALSACA+LGAL+
Sbjct: 242 RKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALE 301

Query: 331 AGLRIHKYLSSHGFKLNQTIGTAVVDMYAKCGNIESAGEVFREIKQKGLLTWSVMIWGWA 390
            G  IH YL+    +++  +G  ++DMYAKCG +E A EVF+ IK+K +  W+ +I G+A
Sbjct: 302 QGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYA 361

Query: 391 IHGHFKKSIQYFEWMKSAGTKPDGVVFLAVLTACSHSGQVDDGLEFFDSMRRDYLIEPSM 450
            HGH +++I  F  M+  G KP+ + F AVLTACS++G V++G   F SM RDY ++P++
Sbjct: 362 YHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTI 421

Query: 451 KHYTLIVDMLGRAGRLDEALKFIRDMPINPDFVVWGALFCACRAHKNIKMAELASEKLLE 510
           +HY  IVD+LGRAG LDEA +FI++MP+ P+ V+WGAL  ACR HKNI++ E   E L+ 
Sbjct: 422 EHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA 481

Query: 511 LEPKHPGSYVFLSNAYAAVGRWEDAERVRVSMRDRGAQKDPGWSFMEVDDKLHRFVAGDN 570
           ++P H G YV  +N +A   +W+ A   R  M+++G  K PG S + ++   H F+AGD 
Sbjct: 482 IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDR 541

Query: 571 THNRAQEIYSKLDEINAGAREKGYTKGIECVLHNIEEEEKEEALGH-HSEKLALAFGLVS 630
           +H   ++I SK   +     E GY   +E +L ++ ++++ EA+ H HSEKLA+ +GL+ 
Sbjct: 542 SHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIK 579

Query: 631 TAPETTIRIVKNLRI 642
           T P T IRI+KNLR+
Sbjct: 602 TKPGTIIRIMKNLRV 579

[Close]
BLAST of Carg11081 vs. TAIR 10
Match: AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 425.2 bits (1092), Expect = 9.4e-119
Identity = 228/650 (35.08%), Postives = 359/650 (55.23%), Query Frame = 0 

Query: 33  TSSSSSPQISSLETHFIDLIHASDSTHKLRQIHGQLYRCNIFSSSRVVTQFISSCSSLNS 92
           T  S++ ++  ++T    LI  + + + L+QIH  L   ++   + +V   +        
Sbjct: 5   TVPSATSKVQQIKT----LISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ 64

Query: 93  VDYAVLIFQRFELKNSFLFNALIRGLAENSRFESSISYFVCMLRWKISPDRLTFPFVLKS 152
             Y+ L+F   +  N FL+N+LI G   N  F  ++  F+ + +  +     TFP VLK+
Sbjct: 65  TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 124

Query: 153 AAALSNGGVGSALHSGILKFGLEFDSFVRVSLVDMYVKVDDLGSALKVFDESPDRIKKGN 212
               S+  +G  LHS ++K G   D     SL+ +Y     L  A K+FDE PDR    +
Sbjct: 125 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR----S 184

Query: 213 VLIWNVLIHGYCRVGNLVKATELFETMPEK----------------------DTGSW--- 272
           V+ W  L  GY   G   +A +LF+ M E                       D+G W   
Sbjct: 185 VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVK 244

Query: 273 --------------NSLINGFMRKGQLGPAHELFEKMPEKNVVSWTTMVNGFSQNGDPEK 332
                          +L+N + + G++  A  +F+ M EK++V+W+TM+ G++ N  P++
Sbjct: 245 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 304

Query: 333 ALQFFFCMLEEGARPNDYTIVSALSACAKLGALDAGLRIHKYLSSHGFKLNQTIGTAVVD 392
            ++ F  ML+E  +P+ ++IV  LS+CA LGALD G      +  H F  N  +  A++D
Sbjct: 305 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 364

Query: 393 MYAKCGNIESAGEVFREIKQKGLLTWSVMIWGWAIHGHFKKSIQYFEWMKSAGTKPDGVV 452
           MYAKCG +    EVF+E+K+K ++  +  I G A +GH K S   F   +  G  PDG  
Sbjct: 365 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 424

Query: 453 FLAVLTACSHSGQVDDGLEFFDSMRRDYLIEPSMKHYTLIVDMLGRAGRLDEALKFIRDM 512
           FL +L  C H+G + DGL FF+++   Y ++ +++HY  +VD+ GRAG LD+A + I DM
Sbjct: 425 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 484

Query: 513 PINPDFVVWGALFCACRAHKNIKMAELASEKLLELEPKHPGSYVFLSNAYAAVGRWEDAE 572
           P+ P+ +VWGAL   CR  K+ ++AE   ++L+ LEP + G+YV LSN Y+  GRW++A 
Sbjct: 485 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 544

Query: 573 RVRVSMRDRGAQKDPGWSFMEVDDKLHRFVAGDNTHNRAQEIYSKLDEINAGAREKGYTK 632
            VR  M  +G +K PG+S++E++ K+H F+A D +H  + +IY+KL+++    R  G+  
Sbjct: 545 EVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP 604

Query: 633 GIECVLHNIEEEEKEEALGHHSEKLALAFGLVSTAPETTIRIVKNLRIIG 644
             E V  ++EEEEKE  LG+HSEKLA+A GL+ST     IR+VKNLR+ G
Sbjct: 605 TTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCG 646

The following BLAST results are available for this feature:
BLAST of Carg11081 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7026055.10.0e+00100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6593716.10.0e+0099.84Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022964045.10.0e+0099.84pentatricopeptide repeat-containing protein At1g04840 [Cucurbita moschata][more]
XP_023513771.10.0e+0097.66pentatricopeptide repeat-containing protein At1g04840 [Cucurbita pepo subsp. pep... [more]
XP_023000600.10.0e+0097.34pentatricopeptide repeat-containing protein At1g04840 [Cucurbita maxima][more]
BLAST of Carg11081 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9MAT22.7e-19554.04Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana OX... [more]
Q9LN013.1e-12736.70Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O823804.2e-12435.77Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9FJY71.8e-11937.89Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9SR821.3e-11735.08Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... [more]
BLAST of Carg11081 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HJP90.0e+0099.84pentatricopeptide repeat-containing protein At1g04840 OS=Cucurbita moschata OX=3... [more]
A0A6J1KIT80.0e+0097.34pentatricopeptide repeat-containing protein At1g04840 OS=Cucurbita maxima OX=366... [more]
A0A6J1C9L20.0e+0088.18pentatricopeptide repeat-containing protein At1g04840 OS=Momordica charantia OX=... [more]
A0A0A0LI860.0e+0085.16DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G1398... [more]
A0A5A7SRY40.0e+0084.97Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Carg11081 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G04840.11.9e-19654.04Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.12.2e-12836.70Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G29760.13.0e-12535.77Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G66520.11.3e-12037.89Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G08820.19.4e-11935.08Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 328..594
e-value: 4.2E-38
score: 133.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 45..162
e-value: 3.4E-9
score: 38.3
coord: 244..327
e-value: 5.2E-23
score: 83.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 163..243
e-value: 7.3E-13
score: 50.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 186..534
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 549..641
e-value: 4.7E-20
score: 71.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 516..543
e-value: 0.7
score: 10.3
coord: 349..376
e-value: 0.0017
score: 18.5
coord: 110..137
e-value: 0.04
score: 14.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 402..458
e-value: 0.0055
score: 16.8
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 212..239
e-value: 1.1E-7
score: 31.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 273..322
e-value: 7.3E-10
score: 38.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 246..276
e-value: 3.8E-4
score: 18.4
coord: 276..309
e-value: 1.7E-6
score: 25.8
coord: 215..242
e-value: 4.2E-6
score: 24.6
coord: 110..142
e-value: 9.2E-4
score: 17.2
coord: 450..473
e-value: 0.003
score: 15.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 274..308
score: 12.309597
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 410..440
score: 8.593717
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 212..246
score: 10.928473
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 107..141
score: 9.613118
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 375..409
score: 9.404853
NoneNo IPR availablePANTHERPTHR24015:SF1865TETRATRICOPEPTIDE REPEAT-LIKE SUPERFAMILY PROTEIN ISOFORM 1coord: 32..643
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 32..643

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg11081-RACarg11081-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding