Carg11079 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11079
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Ferredoxin-like protein
Location	Carg_Chr08: 5657298 .. 5659246 (-)
RNA-Seq Expression	Carg11079
Synteny	Carg11079

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGATGAAGAAGCTCTGTTTGCTCAATTGCTTTGGTTTCTGTTCTGTTTTGCTTGCTGTTCTTGTTTCCTCCAAGTACCATGGTATGATTATTGCTTGATTTTCCTTTTTCTTGCCTGAATCTGACAATGTGATGGGTTTTGATTTGTTTGAGGTTGTGATTCATCTGTTTTGTGAATGGTGGTGTGTTTTGTTGTTTGTATTCAAGCTTGTTGAGAGTGGTCGTAGGGTTGGGCAGTTGTCCGTGAGATTAGTCTAGGTACGTGCAACCGGAGGCGTAATGTTTGAATTATTTGGTCTTTGTTTGGCAAATTCAGGTTGTTGCTTCCTAATGAATAACATAGTTGTGTGTGTTGGTGGATGAAAGCGGCACGTGGACTAATTTAGGGAATGATCGTGGGTTATAATCGAGGAATACTATCTCTATTGGTATGAGGTCTTTTGGGAAGCTCAAAGCAAAGCCATGAGAGCTTATGCTTAAAGTAGACCATATCATATCACTGTGGAGAGTCGTGTTCATCTAACATTGTGATTATAGTTTTCATTTCTTGAAGGAATTGATGTGACATCCTATATCGATTGAAGGAATTGATGCTCAAACGGTTGGAGAGGACGTTGAGCCCTGAAGGGGGGTGGACACCAAGTGGTGTGTCAACGAGGACGCTGGACCTCGAAGGAGAGTGGATTGTGAGATCCCACATCGATTGGACAGAGGAATAAGTGAGAGGATGTTGAGCCCTGAAGGAGGGTGGACACCAAGTGGCGTGTCAGCGAGGACGCTGGACCTCGAAGGAGAGTGGATTGTGAGATCCCACATCGATTGGAGAGAGGAATAAGTGAGAGGACGTTGAGCCCCGAAGGAGGGTGGACACCAAGTGGCGTGTCAGCGAGGACGCAGGACCTCGAAGGAGAGTGGATTGTGAGATCCCACATCGATTGGAGAGAGGAATAACTGCTAGCGAGAAAGCCTTCTAGCAGACGTGTTTTAAAACCTAAGAGGGAGGCCCATGAGAGAAAATTCTACTAGCAGTGGGCTTAAGCTTCAATGAGTAGGAGGGTGGAGCGGGGCATGATGCCGATGCCCTTTCGAGATAATGATTTTTTTTTGGAAGCTTTGTTTTGGCATTATGGGATGGGAGTTGGAGTTGGAGTGTGAGATCCCACATCGATTGGAGAGGAGAACGAAACATTCCTTATAAGGGTGTGGGCACCTCTTTCTTTTCTAGTAGACGACGATAATACGTAATGTATGAACTTGGGCTGTTACAGAAACATTTCCATTTCATTCTTCTTTTGGCTGGATGGATTTTATAGGTTATTCAGTTTGTTCTTCACTCTACAGGAAACCCAGCTAACGATCTTGTCGACATCATCAACAGAAACCGAACCGCTGCAAAGCTCTCTCGTCTAAGCGACAGTGCAGGTCTCGGGTGCATAGCGTTACAATTTGCCAACTTCTGCAAAGGAAACTGCACAAGCAACAACACAGTCAATTGCAATCCATCCTCAGACAACTTCACAGAAGTCTTCGCTCCAGATTGCGGTGTCGAGCTGCCAACTTTCGACACGATAACCGGTCACATTGTAGCATGTCAACCTGAATATCTCGAGCCAACAGAGGCCTTCTCTCGAGCGCTCATTCCCGACAAGAAAACGCTATCCCTATTGTGGAACAAATCTCATACAGAGGTAGGGGTAGGAATGGTTGGGGTCCATAAAGGGCCATTCTTGTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGCTTGGGGATCAAACAAAAGAGAGGATGCTTCAGTGGAAGCAGCGTTGAATGCAGTAGAGCTCACTCCAATGGAGCTTTATGGAACAATGTTGCCATTGTTATGATCTTTTTTATCATCTCTTCCAAGATTTGTTCTATTTCATTCATGGTGATGTAA

mRNA sequence

ATGATGATGAAGAAGCTCTGTTTGCTCAATTGCTTTGGTTTCTGTTCTGTTTTGCTTGCTGTTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCTAACGATCTTGTCGACATCATCAACAGAAACCGAACCGCTGCAAAGCTCTCTCGTCTAAGCGACAGTGCAGGTCTCGGGTGCATAGCGTTACAATTTGCCAACTTCTGCAAAGGAAACTGCACAAGCAACAACACAGTCAATTGCAATCCATCCTCAGACAACTTCACAGAAGTCTTCGCTCCAGATTGCGGTGTCGAGCTGCCAACTTTCGACACGATAACCGGTCACATTGTAGCATGTCAACCTGAATATCTCGAGCCAACAGAGGCCTTCTCTCGAGCGCTCATTCCCGACAAGAAAACGCTATCCCTATTGTGGAACAAATCTCATACAGAGGTAGGGGTAGGAATGGTTGGGGTCCATAAAGGGCCATTCTTGTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGCTTGGGGATCAAACAAAAGAGAGGATGCTTCAGTGGAAGCAGCGTTGAATGCAGTAGAGCTCACTCCAATGGAGCTTTATGGAACAATGTTGCCATTGTTATGATCTTTTTTATCATCTCTTCCAAGATTTGTTCTATTTCATTCATGGTGATGTAA

Coding sequence (CDS)

ATGATGATGAAGAAGCTCTGTTTGCTCAATTGCTTTGGTTTCTGTTCTGTTTTGCTTGCTGTTCTTGTTTCCTCCAAGTACCATGGAAACCCAGCTAACGATCTTGTCGACATCATCAACAGAAACCGAACCGCTGCAAAGCTCTCTCGTCTAAGCGACAGTGCAGGTCTCGGGTGCATAGCGTTACAATTTGCCAACTTCTGCAAAGGAAACTGCACAAGCAACAACACAGTCAATTGCAATCCATCCTCAGACAACTTCACAGAAGTCTTCGCTCCAGATTGCGGTGTCGAGCTGCCAACTTTCGACACGATAACCGGTCACATTGTAGCATGTCAACCTGAATATCTCGAGCCAACAGAGGCCTTCTCTCGAGCGCTCATTCCCGACAAGAAAACGCTATCCCTATTGTGGAACAAATCTCATACAGAGGTAGGGGTAGGAATGGTTGGGGTCCATAAAGGGCCATTCTTGTGGTGTGTTTTGTTCAGTAGTGGGAAGACAAATTCAACATTTGTTCTTGAAAATCATGGCTTGGGGATCAAACAAAAGAGAGGATGCTTCAGTGGAAGCAGCGTTGAATGCAGTAGAGCTCACTCCAATGGAGCTTTATGGAACAATGTTGCCATTGTTATGATCTTTTTTATCATCTCTTCCAAGATTTGTTCTATTTCATTCATGGTGATGTAA

Protein sequence

MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM

Homology

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BLAST of Carg11079 vs. NCBI nr
Match: KAG7026057.1 (hypothetical protein SDJN02_12555, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 468.8 bits (1205), Expect = 2.7e-128
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60
           MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI
Sbjct: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60

Query: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT 120
           ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT
Sbjct: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT 120

Query: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180
           EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG
Sbjct: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180

Query: 181 IKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 230
           IKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM
Sbjct: 181 IKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 229

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BLAST of Carg11079 vs. NCBI nr
Match: KAG6593718.1 (hypothetical protein SDJN03_13194, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.9 bits (1195), Expect = 3.9e-127
Identity = 227/229 (99.13%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60
           MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI
Sbjct: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60

Query: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT 120
           ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT
Sbjct: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT 120

Query: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180
           EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG
Sbjct: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180

Query: 181 IKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 230
           IKQKRGCFSGSSVECSRAHSNGA WNNVAIVMIFFIISSKICSISF VM
Sbjct: 181 IKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTVM 229

[Close]

BLAST of Carg11079 vs. NCBI nr
Match: XP_022964386.1 (uncharacterized protein LOC111464418 isoform X1 [Cucurbita moschata])

HSP 1 Score: 462.6 bits (1189), Expect = 2.0e-126
Identity = 226/229 (98.69%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60
           MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI
Sbjct: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60

Query: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT 120
           ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTIT HIVACQPEYLEPT
Sbjct: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPT 120

Query: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180
           EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG
Sbjct: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180

Query: 181 IKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 230
           IKQKRGCFSGSSVECSRAHSNGA WNNVAIVMIFFIISSKICSISF VM
Sbjct: 181 IKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTVM 229

[Close]

BLAST of Carg11079 vs. NCBI nr
Match: XP_022999943.1 (uncharacterized protein LOC111494268 isoform X3 [Cucurbita maxima])

HSP 1 Score: 455.3 bits (1170), Expect = 3.1e-124
Identity = 220/229 (96.07%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60
           MMMKKLCLLNCFGFCS+LLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLS+SAGLGC+
Sbjct: 1   MMMKKLCLLNCFGFCSLLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSNSAGLGCM 60

Query: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT 120
           ALQFANFCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT
Sbjct: 61  ALQFANFCKGNCTNNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT 120

Query: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180
           EAFSRALIPDKK LSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG
Sbjct: 121 EAFSRALIPDKKMLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180

Query: 181 IKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 230
           IKQKRGCFSGSSVECSRAHSNGA WNNV+IV+IFFIISSKICS SFMVM
Sbjct: 181 IKQKRGCFSGSSVECSRAHSNGAFWNNVSIVIIFFIISSKICSFSFMVM 229

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BLAST of Carg11079 vs. NCBI nr
Match: XP_022999942.1 (uncharacterized protein LOC111494268 isoform X2 [Cucurbita maxima])

HSP 1 Score: 449.5 bits (1155), Expect = 1.7e-122
Identity = 220/233 (94.42%), Postives = 226/233 (97.00%), Query Frame = 0


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYH----GNPANDLVDIINRNRTAAKLSRLSDSAG 60
           MMMKKLCLLNCFGFCS+LLAVLVSSKYH    GNPANDLVDIINRNRTAAKLSRLS+SAG
Sbjct: 1   MMMKKLCLLNCFGFCSLLLAVLVSSKYHVYSTGNPANDLVDIINRNRTAAKLSRLSNSAG 60

Query: 61  LGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEY 120
           LGC+ALQFANFCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEY
Sbjct: 61  LGCMALQFANFCKGNCTNNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEY 120

Query: 121 LEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLEN 180
           LEPTEAFSRALIPDKK LSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLEN
Sbjct: 121 LEPTEAFSRALIPDKKMLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLEN 180

Query: 181 HGLGIKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 230
           HGLGIKQKRGCFSGSSVECSRAHSNGA WNNV+IV+IFFIISSKICS SFMVM
Sbjct: 181 HGLGIKQKRGCFSGSSVECSRAHSNGAFWNNVSIVIIFFIISSKICSFSFMVM 233

[Close]

BLAST of Carg11079 vs. ExPASy TrEMBL
Match: A0A6J1HIR8 (uncharacterized protein LOC111464418 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464418 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 9.5e-127
Identity = 226/229 (98.69%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60
           MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI
Sbjct: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60

Query: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT 120
           ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTIT HIVACQPEYLEPT
Sbjct: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITSHIVACQPEYLEPT 120

Query: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180
           EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG
Sbjct: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180

Query: 181 IKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 230
           IKQKRGCFSGSSVECSRAHSNGA WNNVAIVMIFFIISSKICSISF VM
Sbjct: 181 IKQKRGCFSGSSVECSRAHSNGAFWNNVAIVMIFFIISSKICSISFTVM 229

[Close]

BLAST of Carg11079 vs. ExPASy TrEMBL
Match: A0A6J1KL52 (uncharacterized protein LOC111494268 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111494268 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 1.5e-124
Identity = 220/229 (96.07%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCI 60
           MMMKKLCLLNCFGFCS+LLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLS+SAGLGC+
Sbjct: 1   MMMKKLCLLNCFGFCSLLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSNSAGLGCM 60

Query: 61  ALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT 120
           ALQFANFCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT
Sbjct: 61  ALQFANFCKGNCTNNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPT 120

Query: 121 EAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180
           EAFSRALIPDKK LSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG
Sbjct: 121 EAFSRALIPDKKMLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLG 180

Query: 181 IKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 230
           IKQKRGCFSGSSVECSRAHSNGA WNNV+IV+IFFIISSKICS SFMVM
Sbjct: 181 IKQKRGCFSGSSVECSRAHSNGAFWNNVSIVIIFFIISSKICSFSFMVM 229

[Close]

BLAST of Carg11079 vs. ExPASy TrEMBL
Match: A0A6J1KC53 (uncharacterized protein LOC111494268 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494268 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.3e-123
Identity = 220/233 (94.42%), Postives = 226/233 (97.00%), Query Frame = 0


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYH----GNPANDLVDIINRNRTAAKLSRLSDSAG 60
           MMMKKLCLLNCFGFCS+LLAVLVSSKYH    GNPANDLVDIINRNRTAAKLSRLS+SAG
Sbjct: 1   MMMKKLCLLNCFGFCSLLLAVLVSSKYHVYSTGNPANDLVDIINRNRTAAKLSRLSNSAG 60

Query: 61  LGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEY 120
           LGC+ALQFANFCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEY
Sbjct: 61  LGCMALQFANFCKGNCTNNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEY 120

Query: 121 LEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLEN 180
           LEPTEAFSRALIPDKK LSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLEN
Sbjct: 121 LEPTEAFSRALIPDKKMLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLEN 180

Query: 181 HGLGIKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 230
           HGLGIKQKRGCFSGSSVECSRAHSNGA WNNV+IV+IFFIISSKICS SFMVM
Sbjct: 181 HGLGIKQKRGCFSGSSVECSRAHSNGAFWNNVSIVIIFFIISSKICSFSFMVM 233

[Close]

BLAST of Carg11079 vs. ExPASy TrEMBL
Match: A0A6J1KEI0 (uncharacterized protein LOC111494268 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494268 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 1.9e-122
Identity = 220/236 (93.22%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 1   MMMKKLCLLNCFGFCSVLLAVLVSSKYH-------GNPANDLVDIINRNRTAAKLSRLSD 60
           MMMKKLCLLNCFGFCS+LLAVLVSSKYH       GNPANDLVDIINRNRTAAKLSRLS+
Sbjct: 1   MMMKKLCLLNCFGFCSLLLAVLVSSKYHGYSVYSTGNPANDLVDIINRNRTAAKLSRLSN 60

Query: 61  SAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQ 120
           SAGLGC+ALQFANFCKGNCT+NNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQ
Sbjct: 61  SAGLGCMALQFANFCKGNCTNNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQ 120

Query: 121 PEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFV 180
           PEYLEPTEAFSRALIPDKK LSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFV
Sbjct: 121 PEYLEPTEAFSRALIPDKKMLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFV 180

Query: 181 LENHGLGIKQKRGCFSGSSVECSRAHSNGALWNNVAIVMIFFIISSKICSISFMVM 230
           LENHGLGIKQKRGCFSGSSVECSRAHSNGA WNNV+IV+IFFIISSKICS SFMVM
Sbjct: 181 LENHGLGIKQKRGCFSGSSVECSRAHSNGAFWNNVSIVIIFFIISSKICSFSFMVM 236

[Close]

BLAST of Carg11079 vs. ExPASy TrEMBL
Match: A0A6J1HHP2 (uncharacterized protein LOC111464418 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464418 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.6e-110
Identity = 198/201 (98.51%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 29  GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFT 88
           GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFT
Sbjct: 8   GNPANDLVDIINRNRTAAKLSRLSDSAGLGCIALQFANFCKGNCTSNNTVNCNPSSDNFT 67

Query: 89  EVFAPDCGVELPTFDTITGHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVG 148
           EVFAPDCGVELPTFDTIT HIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVG
Sbjct: 68  EVFAPDCGVELPTFDTITSHIVACQPEYLEPTEAFSRALIPDKKTLSLLWNKSHTEVGVG 127

Query: 149 MVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHSNGALWNNV 208
           MVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHSNGA WNNV
Sbjct: 128 MVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGIKQKRGCFSGSSVECSRAHSNGAFWNNV 187

Query: 209 AIVMIFFIISSKICSISFMVM 230
           AIVMIFFIISSKICSISF VM
Sbjct: 188 AIVMIFFIISSKICSISFTVM 208

[Close]

BLAST of Carg11079 vs. TAIR 10
Match: AT1G02180.1 (ferredoxin-related )

HSP 1 Score: 231.1 bits (588), Expect = 8.9e-61
Identity = 108/195 (55.38%), Postives = 140/195 (71.79%), Query Frame = 0


Query: 2   MMKKLCLLNCFGFCSVLLAVLVSSKYHGNPANDLVDIINRNRTAAKLSRLSDSAGLGCIA 61
           M  ++ +L        L +VL SSK HGN A+++V I+N+NRTA KL +L++S GLGC+A
Sbjct: 1   MKNEISILELILLFLSLSSVLASSKLHGNSAHEMVSILNQNRTARKLGKLNESPGLGCMA 60

Query: 62  LQFANFCKGNCTSNNTVNCNPSSDNFTEVFAPDCGVELPTFDTITGHIVACQPEYLEPTE 121
           LQ+   C+GNC  NNT++C    D+FT+VFAP+CGVELPTF TITGHI+ C  +Y  P  
Sbjct: 61  LQYVELCEGNCNVNNTLSCEHPEDDFTQVFAPNCGVELPTFGTITGHILGCSSKYAAPEV 120

Query: 122 AFSRALIPDKKTLSLLWNKSHTEVGVGMVGVHKGPFLWCVLFSSGKTNSTFVLENHGLGI 181
           AFS  L  D   LS+L N+SHTEVGVGM  +HKG F WC+LFS G  NS+FVLE++G GI
Sbjct: 121 AFSDILFRDSSALSVLRNRSHTEVGVGMARLHKGTFFWCLLFSDGVKNSSFVLEDNGRGI 180

Query: 182 KQKRGCFSGSSVECS 197
           KQ+ GC+SGS+  CS
Sbjct: 181 KQRTGCYSGSAFPCS 195

The following BLAST results are available for this feature:

BLAST of Carg11079 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026057.1	2.7e-128	100.00	hypothetical protein SDJN02_12555, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6593718.1	3.9e-127	99.13	hypothetical protein SDJN03_13194, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022964386.1	2.0e-126	98.69	uncharacterized protein LOC111464418 isoform X1 [Cucurbita moschata]	[more]
XP_022999943.1	3.1e-124	96.07	uncharacterized protein LOC111494268 isoform X3 [Cucurbita maxima]	[more]
XP_022999942.1	1.7e-122	94.42	uncharacterized protein LOC111494268 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg11079 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg11079 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HIR8	9.5e-127	98.69	uncharacterized protein LOC111464418 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KL52	1.5e-124	96.07	uncharacterized protein LOC111494268 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KC53	8.3e-123	94.42	uncharacterized protein LOC111494268 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KEI0	1.9e-122	93.22	uncharacterized protein LOC111494268 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HHP2	1.6e-110	98.51	uncharacterized protein LOC111464418 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Carg11079 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02180.1	8.9e-61	55.38	ferredoxin-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34537	OS08G0459300 PROTEIN	coord: 1..219
None	No IPR available	PANTHER	PTHR34537:SF2	FERREDOXIN-LIKE PROTEIN	coord: 1..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11079-RA	Carg11079-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane