Carg11065 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCATCAGCAAGTTGAAGACTCCAACATTATTGTACCTCCTGTCAGGGTTCATGTCATGGTTATTGATGATGATGCTACTTCTCTTGCTATTGTTTCAAGCTTGCTCAGAGCCTTGAATTATGAAGGTACAACGTTGCTGAAACAAAATTCAAACTTCTTTCTGTTTGTGTTTTGTGTTCTGTCGTTTGTCATGTTTTGTTTTGTTTTCTTTTTTTTTTTTTTTGAAAGAAATAAAAAAAAAAATCTGGGTTGGATCTTGATTAATCCTCTTTGTTTATGCCTTTTCTTTAAAGGGTTAGAGATTTAACAACCAAAAATCTTCAATTTTTACCTTAATTTCATTTCGACATTGATTTCTTGTTTGTATCATCATTAAAACAATATATTTTTGTTAACGTCTTCTAAGTAATCTATCGATACATATTGCATGAACACGTGTTTGGGCGTATCGATACTAACGTTTTTCGGTAGACATAAAATCAAATCTAGAGTAATTTTAACTCATTTAAAAGGGTTTTTTTTCCTCAATTTTTTCATCAAAGATCTTCAAATTCATCGTAATTTTATCAAACCCTAGCTAGAAAATCACTTTAGCTAAAAGGGTAACTTTTAAATTTATGATTAAAAAAATGATTATGAAGATGGGTTTTCAAAATTATATATCAAACAAGGTTTTAGTGTTGTTTTAGAGATGCCCAAATAATGACAACTTAAAAGTGATGATGAAGATGAAGACTGTTTTGAATTACAAATGGAATGGGTTTCTCTTTGCAGGCTACCATGTATGAAATATTCCTTTTTCTTTTTCTTTTTTGTTCTTTTGTTTCTTAATTTTGTTATGAATTTGTGAATCAAAATTTAAAGTATTTTATATTTTGTTTCAATTAACTCTTTGTTGTTCGATGTTCGTTGTTCGAATTTCAGTCTCTTCGTTTTACGACCCGATTCGAGCTTTGTATACACTTCGGGTGGGGAAGCAATCTTTTGACCTAATTTTGACAGCTCTCTACATGCCAAAGATGGATGGTTTTGAGCTAACAAGGAGAGTGAATGAAGAATTCAAGATCCCTGTGATTAGTGAGTGATTTTGAAATCTTTGAATCAAATCATTTAGCTATATTGATTTTTGTTAATGACCATTTTTATATCGATTTTGAAATCAGTGATCTCGACCGACGATCGAGAAAACGTCATGGTTAGAGCTATCGAAGAAGGCGTTGTACTTTACTTATTGAAACCCTTTTCTTCAAATGACCTAAGAAACATTTGGCAATTTGCTATAAGTACCAAATCAAGAAGTATACCAAACTCGAACTTGTATACTCCAGAAACCGGAAGCCATGGGGTTAGATTTCGATCGATTGAATCACAACCAGTCTCGTCTTCGCAAGGAGTAGTGTCGGGAAGAAAGAAGAAGAAGGATTCGAAAGGAAAAAATGGGAATCAAGAGAAAGTTATTGATAAAAAAGAATCAAACCCTATGAAAAAGAAGGCAAAAGTGGTTTGGACAGATTTCCTTCAATATAAATTCCTACATGCTGTTCATTTCATCGGATTAGACAGTAAGAACATCCTTAATCCCATCAAATTTCTCTTTTTTTTTTTTTTTTTGTTCGGTTTTCTTGACAATTTGACATGTTTGGGCAGGAGCTGTTCCAAAGAAAATCCTTGAAGTCATGAATGTTCCTGGCTTGACAAGGGAAAATGTTGCTAGCCATTTACAGGTTCTCGATTTCTTTACAAAATTTCGATGTTTTTTAGCTTTATCGAAATATGAAAAATTGAATCGTCGACCTCAAATAAAGAAATACAAACCGACAAAGTTTATCAGTTAGGGTCTTAGTATAAAATAAATGAAATTCATGTTAAAAGACATATAAATGCATGAAGGGAAATCTGTCTTGTTCTTATGAAGACAAGTTTTTGGAAAAGAAAATGTTGCAAATATGGGTTATCCATTAAAGCTAATCTCTAAATTTAGCAACAAAAATCTTGGTCAACTCAAAAAAAGATTCTCAATTGAGCTTATCTTTTTAATTTCTTCTCTTAAAAAACATTAATTTTTCGAATTATTTGTTCATATCTAATCTATGTTTTTGTTTGTTCAATTGTTTTCAATCAGAAATACAGAATTTTCCTTAGAAAAGTGGCAGAGCGTTGCATGATCTCATCCGACAAGACAACTGAAGAAATCATTTGGTCTAAATTCCTCTCCCGACATGCTTCATTTGTGTTAGAAAAAATCCAACAAAAACGCTCCTTCAATCTCAATTCTTCTCAAAACCCTAATTTCCCTCCTTTTCCCAACCGTGATCAATGTTCAAACCCTAACAATGGCGACCGTTGCCGGTTCACGAACGGACAGTTGAGTTTCGCTAAGAAGCTCCCACTTTATAATATAGGCCACACGGCGAGTTTTACGAACAACGTCGATCCATTGTCAATGAACGTCGACAATAATGCTCAAGCTTTCAACTTTTCTGGATCCCAATTCCAAAATTCTACTCCTTTTCAAGACCCTTATCTCGGTTTGAGCTTCTCTAGTAATAACATTTACCATGGCGGGTCCTCGGTCGGCTTAAACGGAGAAATCTCGACGACCCAGAACAACGTTTCGAACGGAAATTATGTAGGTTTTGATGGAAATTATGTAGGGTTTGGATTTGGAGGAGATCATAACAGCTACGATTGGGGTTTAATGTGCAATAACAATGAGATCAACTTCGGTGGAGCTTCTCAAGGCACAATGAGCCATTCAAATCATGCTCTCGATAATAAGGTATGAACAAAAATTAAACCCTTTTAGCTATTAATTTCAATTGTTCTTGTTCTTCATATAAATTTCATAATTAGTTGAGTTTAATTTGTAAAATCAGGTTAGTGGCCAAGAAGATAATGGATTTTTGCCTTCTCTTTATCCATCGGAGAGCATTGTTCATAATCAAATCCCTAATCAAGTAAGTAATGAAGCAATATTTAATAATAAAAATGTAATTAACATATTTAATCAAGATTTTGAAAGCGTTAATAACTTTAAGAGTCATTATTTGCAGCAACAAGACAGTGTGGGTTTCATGAAAGATCAAAGCCATCAGCTCAATAACATGTATATTACAGATGATGAAAGTTCTACATTTGATCCTTTATCCATTGATGATCAGGCAAGCTTCTTAATTTGA ATGGACCATCAGCAAGTTGAAGACTCCAACATTATTGTACCTCCTGTCAGGGTTCATGTCATGGTTATTGATGATGATGCTACTTCTCTTGCTATTGTTTCAAGCTTGCTCAGAGCCTTGAATTATGAAGTCTCTTCGTTTTACGACCCGATTCGAGCTTTGTATACACTTCGGGTGGGGAAGCAATCTTTTGACCTAATTTTGACAGCTCTCTACATGCCAAAGATGGATGGTTTTGAGCTAACAAGGAGAGTGAATGAAGAATTCAAGATCCCTAAATACAGAATTTTCCTTAGAAAAGTGGCAGAGCGTTGCATGATCTCATCCGACAAGACAACTGAAGAAATCATTTGGTCTAAATTCCTCTCCCGACATGCTTCATTTGTGTTAGAAAAAATCCAACAAAAACGCTCCTTCAATCTCAATTCTTCTCAAAACCCTAATTTCCCTCCTTTTCCCAACCGTGATCAATGTTCAAACCCTAACAATGGCGACCGTTGCCGGTTCACGAACGGACAGTTGAGTTTCGCTAAGAAGCTCCCACTTTATAATATAGGCCACACGGCGAGTTTTACGAACAACGTCGATCCATTGTCAATGAACGTCGACAATAATGCTCAAGCTTTCAACTTTTCTGGATCCCAATTCCAAAATTCTACTCCTTTTCAAGACCCTTATCTCGGTTTGAGCTTCTCTAGTAATAACATTTACCATGGCGGGTCCTCGGTCGGCTTAAACGGAGAAATCTCGACGACCCAGAACAACGTTTCGAACGGAAATTATGTAGGTTTTGATGGAAATTATGTAGGGTTTGGATTTGGAGGAGATCATAACAGCTACGATTGGGGTTTAATGTGCAATAACAATGAGATCAACTTCGGTGGAGCTTCTCAAGGCACAATGAGCCATTCAAATCATGCTCTCGATAATAAGCAACAAGACAGTGTGGGTTTCATGAAAGATCAAAGCCATCAGCTCAATAACATGTATATTACAGATGATGAAAGTTCTACATTTGATCCTTTATCCATTGATGATCAGGCAAGCTTCTTAATTTGA ATGGACCATCAGCAAGTTGAAGACTCCAACATTATTGTACCTCCTGTCAGGGTTCATGTCATGGTTATTGATGATGATGCTACTTCTCTTGCTATTGTTTCAAGCTTGCTCAGAGCCTTGAATTATGAAGTCTCTTCGTTTTACGACCCGATTCGAGCTTTGTATACACTTCGGGTGGGGAAGCAATCTTTTGACCTAATTTTGACAGCTCTCTACATGCCAAAGATGGATGGTTTTGAGCTAACAAGGAGAGTGAATGAAGAATTCAAGATCCCTAAATACAGAATTTTCCTTAGAAAAGTGGCAGAGCGTTGCATGATCTCATCCGACAAGACAACTGAAGAAATCATTTGGTCTAAATTCCTCTCCCGACATGCTTCATTTGTGTTAGAAAAAATCCAACAAAAACGCTCCTTCAATCTCAATTCTTCTCAAAACCCTAATTTCCCTCCTTTTCCCAACCGTGATCAATGTTCAAACCCTAACAATGGCGACCGTTGCCGGTTCACGAACGGACAGTTGAGTTTCGCTAAGAAGCTCCCACTTTATAATATAGGCCACACGGCGAGTTTTACGAACAACGTCGATCCATTGTCAATGAACGTCGACAATAATGCTCAAGCTTTCAACTTTTCTGGATCCCAATTCCAAAATTCTACTCCTTTTCAAGACCCTTATCTCGGTTTGAGCTTCTCTAGTAATAACATTTACCATGGCGGGTCCTCGGTCGGCTTAAACGGAGAAATCTCGACGACCCAGAACAACGTTTCGAACGGAAATTATGTAGGTTTTGATGGAAATTATGTAGGGTTTGGATTTGGAGGAGATCATAACAGCTACGATTGGGGTTTAATGTGCAATAACAATGAGATCAACTTCGGTGGAGCTTCTCAAGGCACAATGAGCCATTCAAATCATGCTCTCGATAATAAGCAACAAGACAGTGTGGGTTTCATGAAAGATCAAAGCCATCAGCTCAATAACATGTATATTACAGATGATGAAAGTTCTACATTTGATCCTTTATCCATTGATGATCAGGCAAGCTTCTTAATTTGA MDHQQVEDSNIIVPPVRVHVMVIDDDATSLAIVSSLLRALNYEVSSFYDPIRALYTLRVGKQSFDLILTALYMPKMDGFELTRRVNEEFKIPKYRIFLRKVAERCMISSDKTTEEIIWSKFLSRHASFVLEKIQQKRSFNLNSSQNPNFPPFPNRDQCSNPNNGDRCRFTNGQLSFAKKLPLYNIGHTASFTNNVDPLSMNVDNNAQAFNFSGSQFQNSTPFQDPYLGLSFSSNNIYHGGSSVGLNGEISTTQNNVSNGNYVGFDGNYVGFGFGGDHNSYDWGLMCNNNEINFGGASQGTMSHSNHALDNKQQDSVGFMKDQSHQLNNMYITDDESSTFDPLSIDDQASFLI Homology
BLAST of Carg11065 vs. NCBI nr
Match: KAG7026071.1 (Two-component response regulator ORR21, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 700.7 bits (1807), Expect = 6.6e-198 Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0
BLAST of Carg11065 vs. NCBI nr
Match: KAG6593732.1 (Two-component response regulator ORR21, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 617.5 bits (1591), Expect = 7.3e-173 Identity = 351/540 (65.00%), Postives = 351/540 (65.00%), Query Frame = 0
BLAST of Carg11065 vs. NCBI nr
Match: XP_023514913.1 (putative two-component response regulator ARR21 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 600.9 bits (1548), Expect = 7.1e-168 Identity = 342/535 (63.93%), Postives = 345/535 (64.49%), Query Frame = 0
BLAST of Carg11065 vs. NCBI nr
Match: XP_022964427.1 (two-component response regulator ORR22-like [Cucurbita moschata]) HSP 1 Score: 596.7 bits (1537), Expect = 1.3e-166 Identity = 340/534 (63.67%), Postives = 342/534 (64.04%), Query Frame = 0
BLAST of Carg11065 vs. NCBI nr
Match: XP_023000182.1 (two-component response regulator ORR24-like [Cucurbita maxima]) HSP 1 Score: 580.9 bits (1496), Expect = 7.6e-162 Identity = 334/535 (62.43%), Postives = 338/535 (63.18%), Query Frame = 0
BLAST of Carg11065 vs. ExPASy Swiss-Prot
Match: Q9LYP5 (Putative two-component response regulator ARR21 OS=Arabidopsis thaliana OX=3702 GN=ARR21 PE=2 SV=3) HSP 1 Score: 65.5 bits (158), Expect = 1.4e-09 Identity = 30/74 (40.54%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of Carg11065 vs. ExPASy Swiss-Prot
Match: P62598 (Two-component response regulator ARR12 OS=Arabidopsis thaliana OX=3702 GN=ARR12 PE=2 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 7.0e-09 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Carg11065 vs. ExPASy Swiss-Prot
Match: B8B3I4 (Two-component response regulator ORR22 OS=Oryza sativa subsp. indica OX=39946 GN=RR22 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 7.0e-09 Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Carg11065 vs. ExPASy Swiss-Prot
Match: Q5SML5 (Two-component response regulator ORR22 OS=Oryza sativa subsp. japonica OX=39947 GN=RR22 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 7.0e-09 Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Carg11065 vs. ExPASy Swiss-Prot
Match: A2XE31 (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN=RR21 PE=3 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 2.0e-08 Identity = 46/173 (26.59%), Postives = 81/173 (46.82%), Query Frame = 0
BLAST of Carg11065 vs. ExPASy TrEMBL
Match: A0A6J1HHS8 (two-component response regulator ORR22-like OS=Cucurbita moschata OX=3662 GN=LOC111464452 PE=4 SV=1) HSP 1 Score: 596.7 bits (1537), Expect = 6.5e-167 Identity = 340/534 (63.67%), Postives = 342/534 (64.04%), Query Frame = 0
BLAST of Carg11065 vs. ExPASy TrEMBL
Match: A0A6J1KCX8 (two-component response regulator ORR24-like OS=Cucurbita maxima OX=3661 GN=LOC111494471 PE=4 SV=1) HSP 1 Score: 580.9 bits (1496), Expect = 3.7e-162 Identity = 334/535 (62.43%), Postives = 338/535 (63.18%), Query Frame = 0
BLAST of Carg11065 vs. ExPASy TrEMBL
Match: A0A5D3DLL4 (Two-component response regulator ARR10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00750 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 1.6e-80 Identity = 201/401 (50.12%), Postives = 245/401 (61.10%), Query Frame = 0
BLAST of Carg11065 vs. ExPASy TrEMBL
Match: A0A1S4E2N1 (uncharacterized protein LOC103499086 OS=Cucumis melo OX=3656 GN=LOC103499086 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 7.3e-78 Identity = 200/417 (47.96%), Postives = 244/417 (58.51%), Query Frame = 0
BLAST of Carg11065 vs. ExPASy TrEMBL
Match: A0A5A7TFD8 (Two-component response regulator ARR14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002510 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 3.4e-67 Identity = 201/516 (38.95%), Postives = 245/516 (47.48%), Query Frame = 0
BLAST of Carg11065 vs. TAIR 10
Match: AT2G25180.1 (response regulator 12 ) HSP 1 Score: 63.2 bits (152), Expect = 5.0e-10 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Carg11065 vs. TAIR 10
Match: AT3G16857.1 (response regulator 1 ) HSP 1 Score: 60.8 bits (146), Expect = 2.5e-09 Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0
BLAST of Carg11065 vs. TAIR 10
Match: AT3G16857.2 (response regulator 1 ) HSP 1 Score: 60.8 bits (146), Expect = 2.5e-09 Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0
BLAST of Carg11065 vs. TAIR 10
Match: AT4G31920.1 (response regulator 10 ) HSP 1 Score: 59.7 bits (143), Expect = 5.5e-09 Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0
BLAST of Carg11065 vs. TAIR 10
Match: AT1G67710.1 (response regulator 11 ) HSP 1 Score: 58.9 bits (141), Expect = 9.3e-09 Identity = 30/78 (38.46%), Postives = 47/78 (60.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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