Carg11035 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11035
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	60S ribosomal protein L37a
Location	Carg_Chr08: 5966988 .. 5968757 (+)
RNA-Seq Expression	Carg11035
Synteny	Carg11035

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCCCGCTAGTTCGCCAAAATGGTAATCCAAATTCCCATCGCCTATTGTTCGTTAATTTCTATCTTCATGTTTGGAGCTGAGGAATCTTTTGAGATTATTTTGTGTATTTCATAGACGAAATTGATTGGATATTTGGTGATAACGTCTCTTGGGCTTTTAACAATGCTCTGTGTTAAGCGATCAAGTTCTTGTTGGTTAGTTTTTTTCGAGAGAAATTTGAAGGGACTAGATTGATGTAGGATTTCCTGAATGTTGTTGATCAGTTTTCTTAATAAGTTCATTATCCTTGTCTAGAGGTTTATGTCTGGCAATATTTTGATATTCAGGACATGAAAGATGAAGGCTAGGCTAGCAGGACATTGGTTTCTATTGATTTAGCACCTAGAAGGCATATGCAAGTGCTGTAGTAAATTCACCAAGATTAATCCTGTTCTACATTTTGGTTTTTTACGGACTTTTATATTGTAGTAAAATTCAAACTAAGGGAAACAATGTTTTTAATCCATTTAGTTATTGCTGGATGCTAGGTAGGGAAATTCAAACTAATGGCAACAATGTTTTCAATCCATTTAGTTATTGCTGGATGTTAGGTAGGGAAGATTAATGTGATAAATATGCTGAATGTCGAATCTTTCTTTTGGACTTCGCTTGTTCTCCTTTTGAACCAGATACCAGAGTTTGTGTTAGTAGTGTTGTCTAGCTATCCAAGGAGTTGACGCAATATATATTCCTAATGGCTTATTCGATCATTAATAATTTTTTATGTCATGAACTCATAAATCAGACTTCTGGAATCTTGCCATAGAATTCTGTTCACCCTTTTTATTTATTCTCCTTTTTCTTCTTGATGGTTGGATCCGTAACTTTCTCATTACCTTTTATGATGCTGTGTAGACAAAGAGAACCAAGAAGGCTGGCATCGTTGGCAAGTATGGTATGTGATTCTATCATTCTTATTCCCAAGATAAGATTGAACTAAAAATGTTGGGAGAGGGAATATGTATAGGATTCTGTTTCTCATAAAAAAAGATTTTGTATAGGATTTTTTGGAATTTGGTGAAAGATTTTGATAGAAAAGAATATTATGATGGTTTCATTGATAGAGAGATACTCTTCACTGGTCTGGAATTTACATTAGTTGATCAAGCATTTTTCTTGTTTGCTAGATGACAACCCTCCCCTTTCTTTGTCGTACTCGTAATTTTATATATAACATATTAAAAATGCTTTCTTGATGATTACAGGCACTCGTTATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTAAGTCAGCACAGCAAGTACTTCTGTGAGTTTTGTGGGAAGGTACAACATTGTTTAAAACGCTCGTTTTGGCGTCCTTGTGAACGTTTATTTGAATCTGTAAATGTGAAACATTTGAGTACTATACGATCTGTCCTTTCAGTATGCGGTGAAGAGGAAGGCTGTGGGAATATGGGGTTGCAAAGATTGCGGTAAAGTGAAGGCAGGAGGGGCTTACACGTTGAAGTAAGGATGCTTGAGATTGCTCTCTTTGTATGTCTTTCTTATTCCCAAACTTGTTTCAATGTTTTGACTATGTATGTTGTTCGTTAATGACAGTACTGCAAGTGCCGTGACTGTGAGGAGTACCATAAGAAGGTTGAGGGAGCAGACAGAAAGCTAGATGAACTACCAGATTTATCATTTCTATCAATTGAGGAGGAGGCATGGAGTAGTTTTGTTGAGGTTTAGTCCCTTTAATTTCGTATATTTTTCCC

mRNA sequence

CTCTCCCGCTAGTTCGCCAAAATGGTAATCCAAATTCCCATCGCCTATTGTTCGTTAATTTCTATCTTCATGTTTGGAGCTGAGGAATCTTTTGAGATTATTTTGTGTATTTCATAGACGAAATTGATTGGATATTTGGTGATAACGTCTCTTGGGCTTTTAACAATGCTCTGTGTTAAGCGATCAAGTTCTTGTTGGTTAGTTTTTTTCGAGAGAAATTTGAAGGGACTAGATTGATGTAGGATTTCCTGAATGTTGTTGATCAGTTTTCTTAATAAGTTCATTATCCTTGTCTAGAGGTTTATGTCTGGCAATATTTTGATATTCAGGACATGAAAGATGAAGGCTAGGCTAGCAGGACATTGGTTTCTATTGATTTAGCACCTAGAAGGCATATGCAAGTGCTGTAGTAAATTCACCAAGATTAATCCTGTTCTACATTTTGGTTTTTTACGGACTTTTATATTGTAGTAAAATTCAAACTAAGGGAAACAATGTTTTTAATCCATTTAGTTATTGCTGGATGCTAGGTAGGGAAATTCAAACTAATGGCAACAATGTTTTCAATCCATTTAGTTATTGCTGGATGTTAGGTAGGGAAGATTAATGTGATAAATATGCTGAATGTCGAATCTTTCTTTTGGACTTCGCTTGTTCTCCTTTTGAACCAGATACCAGAGTTTGTGTTAGTAGTGTTGTCTAGCTATCCAAGGAGTTGACGCAATATATATTCCTAATGGCTTATTCGATCATTAATAATTTTTTATGTCATGAACTCATAAATCAGACTTCTGGAATCTTGCCATAGAATTCTGTTCACCCTTTTTATTTATTCTCCTTTTTCTTCTTGATGGTTGGATCCGTAACTTTCTCATTACCTTTTATGATGCTGTGTAGACAAAGAGAACCAAGAAGGCTGGCATCGTTGGCAAGTATGGCACTCGTTATGGTGCTAGTTTGAGGAAGCAAATTAAGAAGATGGAAGTAAGTCAGCACAGCAAGTACTTCTGTGAGTTTTGTGGGAAGTATGCGGTGAAGAGGAAGGCTGTGGGAATATGGGGTTGCAAAGATTGCGGTAAAGTGAAGGCAGGAGGGGCTTACACGTTGAATACTGCAAGTGCCGTGACTGTGAGGAGTACCATAAGAAGGTTGAGGGAGCAGACAGAAAGCTAGATGAACTACCAGATTTATCATTTCTATCAATTGAGGAGGAGGCATGGAGTAGTTTTGTTGAGGTTTAGTCCCTTTAATTTCGTATATTTTTCCC

Coding sequence (CDS)

ATGGAAGTAAGTCAGCACAGCAAGTACTTCTGTGAGTTTTGTGGGAAGTATGCGGTGAAGAGGAAGGCTGTGGGAATATGGGGTTGCAAAGATTGCGGTAAAGTGAAGGCAGGAGGGGCTTACACGTTGAATACTGCAAGTGCCGTGACTGTGAGGAGTACCATAAGAAGGTTGAGGGAGCAGACAGAAAGCTAG

Protein sequence

MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Homology

[Close]

BLAST of Carg11035 vs. NCBI nr
Match: RXI00911.1 (hypothetical protein DVH24_001145 [Malus domestica] >TQD91193.1 hypothetical protein C1H46_023207 [Malus baccata])

HSP 1 Score: 133.3 bits (334), Expect = 7.6e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 34 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 93

Query: 61 QTES 65
          QTES
Sbjct: 94 QTES 97

[Close]

BLAST of Carg11035 vs. NCBI nr
Match: TMW95992.1 (hypothetical protein EJD97_008077 [Solanum chilense])

HSP 1 Score: 133.3 bits (334), Expect = 7.6e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]

BLAST of Carg11035 vs. NCBI nr
Match: PHU08411.1 (60S ribosomal protein L37a [Capsicum chinense])

HSP 1 Score: 133.3 bits (334), Expect = 7.6e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
           MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 44  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 103

Query: 61  QTES 65
           QTES
Sbjct: 104 QTES 107

[Close]

BLAST of Carg11035 vs. NCBI nr
Match: MBA0680301.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 133.3 bits (334), Expect = 7.6e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
           MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 41  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 100

Query: 61  QTES 65
           QTES
Sbjct: 101 QTES 104

[Close]

BLAST of Carg11035 vs. NCBI nr
Match: PPS00936.1 (hypothetical protein GOBAR_AA19715 [Gossypium barbadense])

HSP 1 Score: 133.3 bits (334), Expect = 7.6e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 31 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 90

Query: 61 QTES 65
          QTES
Sbjct: 91 QTES 94

[Close]

BLAST of Carg11035 vs. ExPASy Swiss-Prot
Match: Q9XHE4 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.4e-30
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACGKVKAGGAYTLNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]

BLAST of Carg11035 vs. ExPASy Swiss-Prot
Match: P0DKK1 (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-29
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTE+
Sbjct: 89 QTEA 92

[Close]

BLAST of Carg11035 vs. ExPASy Swiss-Prot
Match: P0DKK2 (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-29
Identity = 61/64 (95.31%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTE+
Sbjct: 89 QTEA 92

[Close]

BLAST of Carg11035 vs. ExPASy Swiss-Prot
Match: Q9SRK6 (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-29
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]

BLAST of Carg11035 vs. ExPASy Swiss-Prot
Match: Q8RXU5 (60S ribosomal protein L37a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37AC PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 7.1e-29
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTE 64
          Q E
Sbjct: 89 QIE 91

[Close]

BLAST of Carg11035 vs. ExPASy TrEMBL
Match: A0A1U7XSD1 (60S ribosomal protein L37a OS=Nicotiana sylvestris OX=4096 GN=LOC104239566 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]

BLAST of Carg11035 vs. ExPASy TrEMBL
Match: A0A6J1ICH2 (60S ribosomal protein L37a OS=Cucurbita maxima OX=3661 GN=LOC111471808 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]

BLAST of Carg11035 vs. ExPASy TrEMBL
Match: K4CND1 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101251802 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]

BLAST of Carg11035 vs. ExPASy TrEMBL
Match: A0A1U8LTA9 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=LOC107929672 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]

BLAST of Carg11035 vs. ExPASy TrEMBL
Match: A0A1U8IV94 (60S ribosomal protein L37a isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107900799 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
           MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE
Sbjct: 46  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 105

Query: 61  QTES 65
           QTES
Sbjct: 106 QTES 109

[Close]

BLAST of Carg11035 vs. TAIR 10
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 128.6 bits (322), Expect = 1.7e-30
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTES 65
          QTES
Sbjct: 89 QTES 92

[Close]

BLAST of Carg11035 vs. TAIR 10
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 127.1 bits (318), Expect = 5.1e-30
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 1  MEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 60
          MEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLRE
Sbjct: 29 MEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLRE 88

Query: 61 QTE 64
          Q E
Sbjct: 89 QIE 91

The following BLAST results are available for this feature:

BLAST of Carg11035 vs. NCBI nr


Match Name	E-value	Identity	Description
RXI00911.1	7.6e-28	100.00	hypothetical protein DVH24_001145 [Malus domestica] >TQD91193.1 hypothetical pro...	[more]
TMW95992.1	7.6e-28	100.00	hypothetical protein EJD97_008077 [Solanum chilense]	[more]
PHU08411.1	7.6e-28	100.00	60S ribosomal protein L37a [Capsicum chinense]	[more]
MBA0680301.1	7.6e-28	100.00	hypothetical protein [Gossypium aridum]	[more]
PPS00936.1	7.6e-28	100.00	hypothetical protein GOBAR_AA19715 [Gossypium barbadense]	[more]

BLAST of Carg11035 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XHE4	8.4e-30	98.44	60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1	[more]
P0DKK1	1.1e-29	95.31	60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g06...	[more]
P0DKK2	1.1e-29	95.31	60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g05...	[more]
Q9SRK6	2.5e-29	93.75	Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB...	[more]
Q8RXU5	7.1e-29	95.24	60S ribosomal protein L37a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL37AC PE=3 SV=...	[more]

BLAST of Carg11035 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U7XSD1	3.7e-28	100.00	60S ribosomal protein L37a OS=Nicotiana sylvestris OX=4096 GN=LOC104239566 PE=3 ...	[more]
A0A6J1ICH2	3.7e-28	100.00	60S ribosomal protein L37a OS=Cucurbita maxima OX=3661 GN=LOC111471808 PE=3 SV=1	[more]
K4CND1	3.7e-28	100.00	Uncharacterized protein OS=Solanum lycopersicum OX=4081 GN=101251802 PE=3 SV=1	[more]
A0A1U8LTA9	3.7e-28	100.00	60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=LOC107929672 PE=3 SV...	[more]
A0A1U8IV94	3.7e-28	100.00	60S ribosomal protein L37a isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107900...	[more]

BLAST of Carg11035 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10950.1	1.7e-30	93.75	Zinc-binding ribosomal protein family protein	[more]
AT3G60245.1	5.1e-30	95.24	Zinc-binding ribosomal protein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002674	Ribosomal protein L37ae	PFAM	PF01780	Ribosomal_L37ae	coord: 1..60 e-value: 1.7E-25 score: 88.9
IPR011331	Ribosomal protein L37ae/L37e	GENE3D	2.20.25.30		coord: 1..64 e-value: 2.6E-28 score: 99.9
None	No IPR available	PANTHER	PTHR48149:SF2	60S RIBOSOMAL PROTEIN L37A	coord: 1..64
None	No IPR available	PANTHER	PTHR48149	60S RIBOSOMAL PROTEIN L37A-2	coord: 1..64
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 1..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11035-RA	Carg11035-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome