Carg11032 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg11032
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-type E3 ubiquitin transferase
Location	Carg_Chr08: 5978241 .. 5979329 (-)
RNA-Seq Expression	Carg11032
Synteny	Carg11032

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCATCGGAATCTCGGATCCCTCTCCGCCGTTCAATCCGTTCAACTTCAAGGACTGTTCTCAACAAAGTTGCACCGCCTTCTGTCCGCAGTGGTGCGCCTTCTTGTTCCCGCCGCCTCCGCCGTTCTTCGGCCTCGACGATAGTGACGATTCCAGTACGTTCTTCTCGCCACTTATAGTCGCGGTGATCGGGATCTTGGCGAGCGCGTTTGTTCTCGTCACTTACTACGCGATCGTCTCGAAATATTGCCGACGGAGTGTTGGCGACGGCGGAGGCGGAGGACCGGAGGAGAGTTTCGAGACGAATCGAGCGATTAACGAAACGCGGAGGTCTAGTGCGGGATCTGGATTGGATGAGGCGCTGATTAAATCGATCTCGGTTTACAAGTTCAAGAAGGGCGAAGGATTGATCGAAGGAAGCGATTGCTCTGTTTGTTTGAGTGAATTTCAAGAGAATGAGAGTTTGCGATTGTTGCCTAAATGTAGTCACGCTTTTCACCTCCCCTGTATTGATACTTGGCTGAAATCCAATTCGAGTTGCCCTCTCTGTCGCAGCAATATCGCTTCAACGAATCCTCCTCCTCAGGAGACTCCACCACCGCCCGTGACGGCGCTAGGTTACCGCCACAGCAGCGACGCCGCTGTGGTCGTCGTCCAAGATTTATCCGCAAACGTAAGCCAGGAATCCGTCGTAGTTGAAATCGTAAGCGATTCAACTAATCAAGAACAAGAAAATCCGAATCCGAGTCCAAATCCTAGAAGTTTCGATCAAGGAGACGGAAGAACAGAGAGAAGAGAAGAATCCGTCCATTCGATTAGATCAGTTTCAGAAGATCATCACTCCTCTCCATGTCCAGGCGAGAATCTCTCTGTTGCGGATGTATTGAACATCAACCACGAAGAAGACGAAGAAATTGAAGCTCTGGATTCATCCATGGCAGCCGGAATCGGTCCCTCAAACGGCAACAACAAAGAAACAGAAAAATCCAGAAACAAAAACGGCGTACTGAGAATGTCGATTTCATCTGGAATTTTCTCGTTCACAAGGTATACAAAAGGGAAGAACTCGAATTCGCCAAATTAA

mRNA sequence

ATGGAATCCATCGGAATCTCGGATCCCTCTCCGCCGTTCAATCCGTTCAACTTCAAGGACTGTTCTCAACAAAGTTGCACCGCCTTCTGTCCGCAGTGGTGCGCCTTCTTGTTCCCGCCGCCTCCGCCGTTCTTCGGCCTCGACGATAGTGACGATTCCAGTACGTTCTTCTCGCCACTTATAGTCGCGGTGATCGGGATCTTGGCGAGCGCGTTTGTTCTCGTCACTTACTACGCGATCGTCTCGAAATATTGCCGACGGAGTGTTGGCGACGGCGGAGGCGGAGGACCGGAGGAGAGTTTCGAGACGAATCGAGCGATTAACGAAACGCGGAGGTCTAGTGCGGGATCTGGATTGGATGAGGCGCTGATTAAATCGATCTCGGTTTACAAGTTCAAGAAGGGCGAAGGATTGATCGAAGGAAGCGATTGCTCTGTTTGTTTGAGTGAATTTCAAGAGAATGAGAGTTTGCGATTGTTGCCTAAATGTAGTCACGCTTTTCACCTCCCCTGTATTGATACTTGGCTGAAATCCAATTCGAGTTGCCCTCTCTGTCGCAGCAATATCGCTTCAACGAATCCTCCTCCTCAGGAGACTCCACCACCGCCCGTGACGGCGCTAGGTTACCGCCACAGCAGCGACGCCGCTGTGGTCGTCGTCCAAGATTTATCCGCAAACGTAAGCCAGGAATCCGTCGTAGTTGAAATCGTAAGCGATTCAACTAATCAAGAACAAGAAAATCCGAATCCGAGTCCAAATCCTAGAAGTTTCGATCAAGGAGACGGAAGAACAGAGAGAAGAGAAGAATCCGTCCATTCGATTAGATCAGTTTCAGAAGATCATCACTCCTCTCCATGTCCAGGCGAGAATCTCTCTGTTGCGGATGTATTGAACATCAACCACGAAGAAGACGAAGAAATTGAAGCTCTGGATTCATCCATGGCAGCCGGAATCGGTCCCTCAAACGGCAACAACAAAGAAACAGAAAAATCCAGAAACAAAAACGGCGTACTGAGAATGTCGATTTCATCTGGAATTTTCTCGTTCACAAGGTATACAAAAGGGAAGAACTCGAATTCGCCAAATTAA

Coding sequence (CDS)

ATGGAATCCATCGGAATCTCGGATCCCTCTCCGCCGTTCAATCCGTTCAACTTCAAGGACTGTTCTCAACAAAGTTGCACCGCCTTCTGTCCGCAGTGGTGCGCCTTCTTGTTCCCGCCGCCTCCGCCGTTCTTCGGCCTCGACGATAGTGACGATTCCAGTACGTTCTTCTCGCCACTTATAGTCGCGGTGATCGGGATCTTGGCGAGCGCGTTTGTTCTCGTCACTTACTACGCGATCGTCTCGAAATATTGCCGACGGAGTGTTGGCGACGGCGGAGGCGGAGGACCGGAGGAGAGTTTCGAGACGAATCGAGCGATTAACGAAACGCGGAGGTCTAGTGCGGGATCTGGATTGGATGAGGCGCTGATTAAATCGATCTCGGTTTACAAGTTCAAGAAGGGCGAAGGATTGATCGAAGGAAGCGATTGCTCTGTTTGTTTGAGTGAATTTCAAGAGAATGAGAGTTTGCGATTGTTGCCTAAATGTAGTCACGCTTTTCACCTCCCCTGTATTGATACTTGGCTGAAATCCAATTCGAGTTGCCCTCTCTGTCGCAGCAATATCGCTTCAACGAATCCTCCTCCTCAGGAGACTCCACCACCGCCCGTGACGGCGCTAGGTTACCGCCACAGCAGCGACGCCGCTGTGGTCGTCGTCCAAGATTTATCCGCAAACGTAAGCCAGGAATCCGTCGTAGTTGAAATCGTAAGCGATTCAACTAATCAAGAACAAGAAAATCCGAATCCGAGTCCAAATCCTAGAAGTTTCGATCAAGGAGACGGAAGAACAGAGAGAAGAGAAGAATCCGTCCATTCGATTAGATCAGTTTCAGAAGATCATCACTCCTCTCCATGTCCAGGCGAGAATCTCTCTGTTGCGGATGTATTGAACATCAACCACGAAGAAGACGAAGAAATTGAAGCTCTGGATTCATCCATGGCAGCCGGAATCGGTCCCTCAAACGGCAACAACAAAGAAACAGAAAAATCCAGAAACAAAAACGGCGTACTGAGAATGTCGATTTCATCTGGAATTTTCTCGTTCACAAGGTATACAAAAGGGAAGAACTCGAATTCGCCAAATTAA

Protein sequence

MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPLIVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLDEALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNSSCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDSTNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNINHEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNSPN

Homology

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BLAST of Carg11032 vs. NCBI nr
Match: KAG7026103.1 (RING-H2 finger protein ATL51, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 718.8 bits (1854), Expect = 2.4e-203
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60
           MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL
Sbjct: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60

Query: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120
           IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD
Sbjct: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120

Query: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180
           EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS
Sbjct: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180

Query: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240
           SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS
Sbjct: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240

Query: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300
           TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN
Sbjct: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300

Query: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360
           HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS
Sbjct: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360

Query: 361 PN 363
           PN
Sbjct: 361 PN 362

[Close]

BLAST of Carg11032 vs. NCBI nr
Match: XP_022964349.1 (RING-H2 finger protein ATL52-like [Cucurbita moschata])

HSP 1 Score: 716.5 bits (1848), Expect = 1.2e-202
Identity = 361/362 (99.72%), Postives = 361/362 (99.72%), Query Frame = 0


Query: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60
           MESIGISDPSPPFNPFNFKDCSQQ CTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL
Sbjct: 1   MESIGISDPSPPFNPFNFKDCSQQICTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60

Query: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120
           IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD
Sbjct: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120

Query: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180
           EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS
Sbjct: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180

Query: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240
           SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS
Sbjct: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240

Query: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300
           TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN
Sbjct: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300

Query: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360
           HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS
Sbjct: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360

Query: 361 PN 363
           PN
Sbjct: 361 PN 362

[Close]

BLAST of Carg11032 vs. NCBI nr
Match: KAG6593770.1 (RING-H2 finger protein ATL51, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 714.9 bits (1844), Expect = 3.5e-202
Identity = 360/362 (99.45%), Postives = 361/362 (99.72%), Query Frame = 0


Query: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60
           MESIGISDPSPPFNPFNFKDCSQQ CTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL
Sbjct: 1   MESIGISDPSPPFNPFNFKDCSQQICTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60

Query: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120
           IVAVIGILASAFVLVTYYAIVSKYC+RSVGDGGGGGPEESFETNRAINETRRSSAGSGLD
Sbjct: 61  IVAVIGILASAFVLVTYYAIVSKYCQRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120

Query: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180
           EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS
Sbjct: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180

Query: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240
           SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS
Sbjct: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240

Query: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300
           TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN
Sbjct: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300

Query: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360
           HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS
Sbjct: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360

Query: 361 PN 363
           PN
Sbjct: 361 PN 362

[Close]

BLAST of Carg11032 vs. NCBI nr
Match: XP_023000254.1 (RING-H2 finger protein ATL52-like [Cucurbita maxima])

HSP 1 Score: 694.5 bits (1791), Expect = 4.8e-196
Identity = 352/362 (97.24%), Postives = 355/362 (98.07%), Query Frame = 0


Query: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60
           M+SIGISDPSPPFNPFNFKDCSQQ CTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL
Sbjct: 1   MDSIGISDPSPPFNPFNFKDCSQQICTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60

Query: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120
           IVAVIGILASAFVLVTYYAIVSKYCRRSV DGGGGGPEESFETNRAINETRRSSAGSGLD
Sbjct: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVSDGGGGGPEESFETNRAINETRRSSAGSGLD 120

Query: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180
           EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS
Sbjct: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180

Query: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240
           SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS
Sbjct: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240

Query: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300
           TNQEQEN    PNPRSFDQGDGRTERREES+HSIRSVSEDHHSSPCPGENLSVADVL+IN
Sbjct: 241 TNQEQEN----PNPRSFDQGDGRTERREESIHSIRSVSEDHHSSPCPGENLSVADVLSIN 300

Query: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360
           HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKN NS
Sbjct: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNPNS 358

Query: 361 PN 363
           PN
Sbjct: 361 PN 358

[Close]

BLAST of Carg11032 vs. NCBI nr
Match: XP_023513580.1 (RING-H2 finger protein ATL52-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 691.8 bits (1784), Expect = 3.1e-195
Identity = 350/362 (96.69%), Postives = 354/362 (97.79%), Query Frame = 0


Query: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60
           M+SIGISDPSPPFNPFNFKDCSQQ CTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL
Sbjct: 1   MDSIGISDPSPPFNPFNFKDCSQQICTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60

Query: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120
           IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD
Sbjct: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120

Query: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180
           EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENE+LRLLPKCSHAFHLPCIDTWLKSNS
Sbjct: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENENLRLLPKCSHAFHLPCIDTWLKSNS 180

Query: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240
           SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSD AVVVVQDLSANVSQESVVVEIVSDS
Sbjct: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDTAVVVVQDLSANVSQESVVVEIVSDS 240

Query: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300
           TNQEQEN    PNPRSFDQG GRTERREES+HSIRSVSEDHHS+PCPGENLSVADVLNIN
Sbjct: 241 TNQEQEN----PNPRSFDQGHGRTERREESIHSIRSVSEDHHSAPCPGENLSVADVLNIN 300

Query: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360
           HEEDEEIEALDSSMAAGIGPSN NNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS
Sbjct: 301 HEEDEEIEALDSSMAAGIGPSNANNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 358

Query: 361 PN 363
           PN
Sbjct: 361 PN 358

[Close]

BLAST of Carg11032 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 6.8e-60
Identity = 147/368 (39.95%), Postives = 213/368 (57.88%), Query Frame = 0


Query: 12  PFNPF-NFKDCSQQSCTAFCPQWCAFLFPPPPPFFGL-DDSDDSSTFFSPLIVAVIGILA 71
           P++P+ ++ DCSQ  C  +CPQWC  +FPPPPP F L DDS  SS+ FSPL++A+IGIL 
Sbjct: 7   PWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILT 66

Query: 72  SAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRR-SSAGSGLDEALIKSIS 131
           SA +LV+YY ++SKYC R            +       + T+R S+ G GL+E++IKSI+
Sbjct: 67  SALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSIT 126

Query: 132 VYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNSSCPLCRSN 191
           VYK+K G+G ++GSDCSVCLSEF+ENESLRLLPKC+HAFHLPCIDTWLKS+S+CPLCR+ 
Sbjct: 127 VYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAF 186

Query: 192 IASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQ--------ESVVV--EIVS 251
           +   N P           +  + +S      V +++ N++         +SVVV  ++  
Sbjct: 187 VTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEI 246

Query: 252 DSTNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLN 311
            S N +  +    P  R       R  + E+S+   RSVS +       G  +S+ADVL 
Sbjct: 247 GSRNSDARSELQLPEER-------RETKDEDSLPIRRSVSLN------SGVVVSIADVLR 306

Query: 312 INHEEDEEIEALDSSMAA-----GIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYT 362
              +E+ E   + +S        G G +    +  ++S   +G    S+S+G F F+RY 
Sbjct: 307 EIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLSTGRFIFSRYD 361

[Close]

BLAST of Carg11032 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 220.7 bits (561), Expect = 2.7e-56
Identity = 141/369 (38.21%), Postives = 202/369 (54.74%), Query Frame = 0


Query: 17  NFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPLIVAVIGILASAFVLVT 76
           +++DCSQ  C+ +CPQWC  +FPPPP F+  D+ D SS+ FSPL++A+IGILASAF+LV+
Sbjct: 16  SYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVS 75

Query: 77  YYAIVSKYCRRSVGDG------------------GGGGPEESFETNRAINETRRSSAGSG 136
           YY ++SKYC R   +                   G      +  TN   N+T     G G
Sbjct: 76  YYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNP--NQTIGGGGGDG 135

Query: 137 LDEALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKS 196
           LDE+LIKSI+VYK++K +G +E SDCSVCLSEFQENESLRLLPKC+HAFH+PCIDTWLKS
Sbjct: 136 LDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKS 195

Query: 197 NSSCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVV---E 256
           +S+CPLCR+ I +++          V  +   +      +V ++ S +   +SVVV   +
Sbjct: 196 HSNCPLCRAFIVTSS---------AVEIVDLTNQQ----IVTENNSISTGDDSVVVVNLD 255

Query: 257 IVSDSTNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVAD 316
           + +  +  E  N   +P P          ERR  S++S              G  +S+AD
Sbjct: 256 LENSRSRNETVNEGSTPKPPEMQDSRDGEERRSASLNS-------------GGGVVSIAD 315

Query: 317 VLNINHEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNK-NGVLRMSISSGIFSFTR--Y 362
           +L    E+DEE   + +S     G        +  + N+ NG+    + S + +  R  Y
Sbjct: 316 ILR-EIEDDEESAGVGTSRWVEEGEGEKTPPPSGSAANQTNGISNFLVRSSMAAMKRSGY 355

[Close]

BLAST of Carg11032 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 201.1 bits (510), Expect = 2.2e-50
Identity = 139/361 (38.50%), Postives = 191/361 (52.91%), Query Frame = 0


Query: 6   ISDPSPPFNPFN-FKDCSQQSCTAFCPQWCAFLFPPPPPF--FGLDDSDDSSTFFSPLIV 65
           ++  +P + P+   +DCSQ  C+ +CPQWC F+FPPPPPF   G    D S   FSPL++
Sbjct: 1   MASSAPAWVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVI 60

Query: 66  AVIGILASAFVLVTYYAIVSKYC----------------RRSVGDGGGGGPEESFETNRA 125
           A+IG+LASAF+LV+YY  +SKYC                  + G G G G       +R+
Sbjct: 61  AIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRS 120

Query: 126 INETRRSSAGSGLDEALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHA 185
            +E+   S  SGLDE LI  I+V K+++G+G +  +DCSVCL EF + ESLRLLP+CSHA
Sbjct: 121 -HESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHA 180

Query: 186 FHLPCIDTWLKSNSSCPLCRSNIASTN----PPPQETPPPPVTALGYRHSSDAAVVVVQD 245
           FH  CIDTWLKS+S+CPLCR+NI         P  E   P  T     H     VVVV D
Sbjct: 181 FHQQCIDTWLKSHSNCPLCRANITFVTVGLASPEPEGCAPGETGGDNTHE----VVVVMD 240

Query: 246 LSANVSQESVVVEIVSDSTNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSE-DH 305
              N+ +E    E VS ++  + ++ +        ++ +G  E REE     R  S  D 
Sbjct: 241 GLENLCEEQ--QEAVSRASTADDDH-DAKDVAEGMEEANGAAEIREEGSPPKRGASSFDL 300

Query: 306 HSSPCPGENLSVADVLNINHEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMS 343
           H        + +ADVL     EDE   A +S + AG G         E S+ + G  R +
Sbjct: 301 HRD----NRMCIADVLQ-ESMEDELTAARESGLLAG-GAGTSRRCHGENSKGRGGRSRRA 347

[Close]

BLAST of Carg11032 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 3.5e-40
Identity = 92/204 (45.10%), Postives = 127/204 (62.25%), Query Frame = 0


Query: 7   SDPSP-PFNPF-NFKDCSQQSCTAFCPQWCAFL-FPPPPPFFG--LDDSDDSSTFFSPLI 66
           SDP+P  +N + N +DC+Q  C+ FCPQWC ++ F PPP  +   L+D   S+   SPL+
Sbjct: 3   SDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSPLV 62

Query: 67  VAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRA-----INETRR---- 126
           +A+ GI A+AF+L  YY +VSKYC     +      E + E+ R+     +N   R    
Sbjct: 63  IAIFGIFATAFLLAAYYTLVSKYCANDTTN------EAASESGRSDIILDVNSPERGDQD 122

Query: 127 -----SSAGSGLDEALIKSISVYKFKKGEG--LIEGSDCSVCLSEFQENESLRLLPKCSH 186
                 S+ +GLD+ LIK I  +K KK +    I G+DCS+CL EF E+ESLRLLPKC+H
Sbjct: 123 DPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNH 182

Query: 187 AFHLPCIDTWLKSNSSCPLCRSNI 190
            FH+ CID WLKS+S+CPLCR+ I
Sbjct: 183 TFHVVCIDRWLKSHSNCPLCRAKI 200

[Close]

BLAST of Carg11032 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 1.3e-26
Identity = 79/223 (35.43%), Postives = 122/223 (54.71%), Query Frame = 0


Query: 3   SIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPP-----FFGLDDSDDSSTFF 62
           S G+ DP  P+N +   D    + +   P W +   P P P        L   D SS+  
Sbjct: 24  SNGVCDPICPYNCYPEPD--YYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 83

Query: 63  SPLIVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGG-----------PEESFETNRA 122
           +  I+ + G + +  +L+T + +V+K+   SV     G             EE F+    
Sbjct: 84  AISIITITGAVLA--ILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQ 143

Query: 123 INETRRSSAGSGLDEALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHA 182
           ++        +GL +++I SI++  +K+G+GLIE +DC VCL+EF+E+ESLRLLPKC+HA
Sbjct: 144 VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHA 203

Query: 183 FHLPCIDTWLKSNSSCPLCRSNIASTN-PPPQETPPPPVTALG 209
           FH+ CIDTWL S+++CPLCR+ IA  +   P+ + P  VT  G
Sbjct: 204 FHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGG 242

[Close]

BLAST of Carg11032 vs. ExPASy TrEMBL
Match: A0A6J1HMW7 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464384 PE=3 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 5.8e-203
Identity = 361/362 (99.72%), Postives = 361/362 (99.72%), Query Frame = 0


Query: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60
           MESIGISDPSPPFNPFNFKDCSQQ CTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL
Sbjct: 1   MESIGISDPSPPFNPFNFKDCSQQICTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60

Query: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120
           IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD
Sbjct: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120

Query: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180
           EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS
Sbjct: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180

Query: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240
           SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS
Sbjct: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240

Query: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300
           TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN
Sbjct: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300

Query: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360
           HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS
Sbjct: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360

Query: 361 PN 363
           PN
Sbjct: 361 PN 362

[Close]

BLAST of Carg11032 vs. ExPASy TrEMBL
Match: A0A6J1KJE3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111494536 PE=3 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 2.3e-196
Identity = 352/362 (97.24%), Postives = 355/362 (98.07%), Query Frame = 0


Query: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60
           M+SIGISDPSPPFNPFNFKDCSQQ CTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL
Sbjct: 1   MDSIGISDPSPPFNPFNFKDCSQQICTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60

Query: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120
           IVAVIGILASAFVLVTYYAIVSKYCRRSV DGGGGGPEESFETNRAINETRRSSAGSGLD
Sbjct: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVSDGGGGGPEESFETNRAINETRRSSAGSGLD 120

Query: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180
           EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS
Sbjct: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180

Query: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240
           SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS
Sbjct: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240

Query: 241 TNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLNIN 300
           TNQEQEN    PNPRSFDQGDGRTERREES+HSIRSVSEDHHSSPCPGENLSVADVL+IN
Sbjct: 241 TNQEQEN----PNPRSFDQGDGRTERREESIHSIRSVSEDHHSSPCPGENLSVADVLSIN 300

Query: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNSNS 360
           HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKN NS
Sbjct: 301 HEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYTKGKNPNS 358

Query: 361 PN 363
           PN
Sbjct: 361 PN 358

[Close]

BLAST of Carg11032 vs. ExPASy TrEMBL
Match: A0A6J1H2X8 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111459995 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 9.0e-156
Identity = 290/366 (79.23%), Postives = 316/366 (86.34%), Query Frame = 0


Query: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60
           M+S+GI DPSPPFNPFNF DCSQ+ CTAFCPQWCA  F PPPP FGLDDSDDS TFFSPL
Sbjct: 1   MDSVGIPDPSPPFNPFNFNDCSQELCTAFCPQWCALPF-PPPPLFGLDDSDDSDTFFSPL 60

Query: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120
           IVAVIGILASAFVLVTYYAIVSKYCRR V DGGG  P E+FE +R +N+TR+SSAG GL+
Sbjct: 61  IVAVIGILASAFVLVTYYAIVSKYCRRRVDDGGGAEPVENFEADRVVNDTRQSSAGPGLN 120

Query: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180
           EAL+KSISV+KFKKGEGLIE SDC++CLSEFQENESLRLLPKCSHAFHL CIDTWLKSNS
Sbjct: 121 EALLKSISVFKFKKGEGLIEESDCAICLSEFQENESLRLLPKCSHAFHLACIDTWLKSNS 180

Query: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240
           SCP CRSNI  TNPPP ETPPP VT LGYRHSSDAAVVVVQDLS NVSQE VVVEIV+DS
Sbjct: 181 SCPFCRSNITPTNPPPPETPPPSVTVLGYRHSSDAAVVVVQDLSENVSQEVVVVEIVTDS 240

Query: 241 TNQEQ--ENPNPSPNPRSFDQGDGRTER-REESVHSIRSVSEDHHSSPCPGENLSVADVL 300
           TN++Q   NPNP+PNP S D+GDGRTER REES+ SIRSVSEDH SSPCP   LSVAD+L
Sbjct: 241 TNRDQGSPNPNPNPNPPSVDRGDGRTERNREESIRSIRSVSEDHQSSPCPVRILSVADIL 300

Query: 301 NINHEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVL----RMSISSGIFSFTRYT 360
           +IN EEDEE+EA++SSMAAG GPSN + KETEKSRN+N VL    RMSI SGIFSF RY 
Sbjct: 301 SINEEEDEEVEAMNSSMAAGSGPSNNDGKETEKSRNRNSVLNSAMRMSIPSGIFSFQRYV 360

[Close]

BLAST of Carg11032 vs. ExPASy TrEMBL
Match: A0A6J1L482 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111498996 PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 1.1e-153
Identity = 284/364 (78.02%), Postives = 313/364 (85.99%), Query Frame = 0


Query: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60
           M+S+GI DPSPPFNPFNF DCSQ+ CTAFCPQWCAF F PPPP FGLDDSD S TFFSPL
Sbjct: 1   MDSVGIPDPSPPFNPFNFNDCSQKLCTAFCPQWCAFPF-PPPPLFGLDDSDKSDTFFSPL 60

Query: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRRSSAGSGLD 120
           IVAVIGILASAFVLVTYYAIVSKYCRR V DGGG  P E+FE +R  N+TR+SSAG GL+
Sbjct: 61  IVAVIGILASAFVLVTYYAIVSKYCRRRVDDGGGAEPVENFEADRVANDTRQSSAGPGLN 120

Query: 121 EALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNS 180
           EALIKSISV+KFKKGEGL+E SDC++CLSEFQENESLRLLPKCSHAFHL CIDTWLKSNS
Sbjct: 121 EALIKSISVFKFKKGEGLVEESDCAICLSEFQENESLRLLPKCSHAFHLACIDTWLKSNS 180

Query: 181 SCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEIVSDS 240
           SCP CRSNI  TNPPP ETPPP VT LGYRHSSDAAVVVVQDLS NVSQE VVVEIV+DS
Sbjct: 181 SCPFCRSNITPTNPPPPETPPPSVTVLGYRHSSDAAVVVVQDLSENVSQEVVVVEIVTDS 240

Query: 241 TNQEQENPNPSPNPRSFDQGDGRTER-REESVHSIRSVSEDHHSSPCPGENLSVADVLNI 300
           TN++Q +PNP+PNP S D+GDGRTE+ REES+ SIRSVSEDH SSPCP   LSVAD+L+I
Sbjct: 241 TNRDQGSPNPNPNPPSVDRGDGRTEKNREESIRSIRSVSEDHQSSPCPVRILSVADILSI 300

Query: 301 NHEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVL----RMSISSGIFSFTRYTKG 360
           + EEDEE+EA++S MAA  GPSN + KETEKSRN+N VL    RMSI SG+FSF RY KG
Sbjct: 301 DEEEDEEVEAMNSPMAADTGPSNNDGKETEKSRNRNSVLNSAMRMSIPSGVFSFQRYAKG 360

[Close]

BLAST of Carg11032 vs. ExPASy TrEMBL
Match: A0A6J1DSH1 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111022765 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.3e-149
Identity = 289/376 (76.86%), Postives = 316/376 (84.04%), Query Frame = 0


Query: 1   MESIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPL 60
           M+S+GI DPSPPFNPFN KDCSQ  CTAFCPQWC ++FPPPPPFFGLDDSDDS TFFSPL
Sbjct: 1   MDSVGIPDPSPPFNPFNLKDCSQGICTAFCPQWCRYVFPPPPPFFGLDDSDDSGTFFSPL 60

Query: 61  IVAVIGILASAFVLVTYYAIVSKYCRRSV---GDGGGGGPEESFETNRAINETRR-SSAG 120
           IVAVIGILASAFVLVTYYAIVSKYCRR V   G G GGGP + FET+RA+N+ RR S AG
Sbjct: 61  IVAVIGILASAFVLVTYYAIVSKYCRRRVDSGGGGAGGGPGDYFETDRAMNDARRPSGAG 120

Query: 121 SGLDEALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWL 180
            GLDEALIKSISV+KFKK EGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHL CIDTWL
Sbjct: 121 PGLDEALIKSISVFKFKKNEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLVCIDTWL 180

Query: 181 KSNSSCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVVEI 240
           KSNSSCPLCR NIASTNP P ETPPP VTALGYRH SDAAVVVVQD S NVSQE+VVVEI
Sbjct: 181 KSNSSCPLCRCNIASTNPNPPETPPPSVTALGYRHRSDAAVVVVQDPSENVSQEAVVVEI 240

Query: 241 ----VSDSTNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHS--SPCPGEN 300
               +S+ +NQ+Q   N   NP S +QGDG TERREE+V SIRSVSED  S  SPC G N
Sbjct: 241 IGHSISNPSNQDQGGSN--SNPPSSEQGDGGTERREETVRSIRSVSEDQQSSDSPCLGRN 300

Query: 301 LSVADVLNINHEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNKNGVL----RMSISSGI 360
           LSVAD+L+I+H+EDEE+EA+DSSMAAGIGPSN + KET KSR +NGVL    RMSI SGI
Sbjct: 301 LSVADILSISHDEDEEVEAVDSSMAAGIGPSNDDGKETGKSRIRNGVLNSAMRMSIPSGI 360

Query: 361 FSFTRYTKGKNSNSPN 363
           FSF ++ KGK+SN PN
Sbjct: 361 FSFAKHAKGKSSNLPN 374

[Close]

BLAST of Carg11032 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 232.6 bits (592), Expect = 4.9e-61
Identity = 147/368 (39.95%), Postives = 213/368 (57.88%), Query Frame = 0


Query: 12  PFNPF-NFKDCSQQSCTAFCPQWCAFLFPPPPPFFGL-DDSDDSSTFFSPLIVAVIGILA 71
           P++P+ ++ DCSQ  C  +CPQWC  +FPPPPP F L DDS  SS+ FSPL++A+IGIL 
Sbjct: 7   PWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILT 66

Query: 72  SAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRAINETRR-SSAGSGLDEALIKSIS 131
           SA +LV+YY ++SKYC R            +       + T+R S+ G GL+E++IKSI+
Sbjct: 67  SALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNESMIKSIT 126

Query: 132 VYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNSSCPLCRSN 191
           VYK+K G+G ++GSDCSVCLSEF+ENESLRLLPKC+HAFHLPCIDTWLKS+S+CPLCR+ 
Sbjct: 127 VYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAF 186

Query: 192 IASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQ--------ESVVV--EIVS 251
           +   N P           +  + +S      V +++ N++         +SVVV  ++  
Sbjct: 187 VTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEI 246

Query: 252 DSTNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVADVLN 311
            S N +  +    P  R       R  + E+S+   RSVS +       G  +S+ADVL 
Sbjct: 247 GSRNSDARSELQLPEER-------RETKDEDSLPIRRSVSLN------SGVVVSIADVLR 306

Query: 312 INHEEDEEIEALDSSMAA-----GIGPSNGNNKETEKSRNKNGVLRMSISSGIFSFTRYT 362
              +E+ E   + +S        G G +    +  ++S   +G    S+S+G F F+RY 
Sbjct: 307 EIEDEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLSTGRFIFSRYD 361

[Close]

BLAST of Carg11032 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-57
Identity = 141/369 (38.21%), Postives = 202/369 (54.74%), Query Frame = 0


Query: 17  NFKDCSQQSCTAFCPQWCAFLFPPPPPFFGLDDSDDSSTFFSPLIVAVIGILASAFVLVT 76
           +++DCSQ  C+ +CPQWC  +FPPPP F+  D+ D SS+ FSPL++A+IGILASAF+LV+
Sbjct: 16  SYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVS 75

Query: 77  YYAIVSKYCRRSVGDG------------------GGGGPEESFETNRAINETRRSSAGSG 136
           YY ++SKYC R   +                   G      +  TN   N+T     G G
Sbjct: 76  YYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNP--NQTIGGGGGDG 135

Query: 137 LDEALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKS 196
           LDE+LIKSI+VYK++K +G +E SDCSVCLSEFQENESLRLLPKC+HAFH+PCIDTWLKS
Sbjct: 136 LDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKS 195

Query: 197 NSSCPLCRSNIASTNPPPQETPPPPVTALGYRHSSDAAVVVVQDLSANVSQESVVV---E 256
           +S+CPLCR+ I +++          V  +   +      +V ++ S +   +SVVV   +
Sbjct: 196 HSNCPLCRAFIVTSS---------AVEIVDLTNQQ----IVTENNSISTGDDSVVVVNLD 255

Query: 257 IVSDSTNQEQENPNPSPNPRSFDQGDGRTERREESVHSIRSVSEDHHSSPCPGENLSVAD 316
           + +  +  E  N   +P P          ERR  S++S              G  +S+AD
Sbjct: 256 LENSRSRNETVNEGSTPKPPEMQDSRDGEERRSASLNS-------------GGGVVSIAD 315

Query: 317 VLNINHEEDEEIEALDSSMAAGIGPSNGNNKETEKSRNK-NGVLRMSISSGIFSFTR--Y 362
           +L    E+DEE   + +S     G        +  + N+ NG+    + S + +  R  Y
Sbjct: 316 ILR-EIEDDEESAGVGTSRWVEEGEGEKTPPPSGSAANQTNGISNFLVRSSMAAMKRSGY 355

[Close]

BLAST of Carg11032 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 167.2 bits (422), Expect = 2.5e-41
Identity = 92/204 (45.10%), Postives = 127/204 (62.25%), Query Frame = 0


Query: 7   SDPSP-PFNPF-NFKDCSQQSCTAFCPQWCAFL-FPPPPPFFG--LDDSDDSSTFFSPLI 66
           SDP+P  +N + N +DC+Q  C+ FCPQWC ++ F PPP  +   L+D   S+   SPL+
Sbjct: 3   SDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSPLV 62

Query: 67  VAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGGPEESFETNRA-----INETRR---- 126
           +A+ GI A+AF+L  YY +VSKYC     +      E + E+ R+     +N   R    
Sbjct: 63  IAIFGIFATAFLLAAYYTLVSKYCANDTTN------EAASESGRSDIILDVNSPERGDQD 122

Query: 127 -----SSAGSGLDEALIKSISVYKFKKGEG--LIEGSDCSVCLSEFQENESLRLLPKCSH 186
                 S+ +GLD+ LIK I  +K KK +    I G+DCS+CL EF E+ESLRLLPKC+H
Sbjct: 123 DPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNH 182

Query: 187 AFHLPCIDTWLKSNSSCPLCRSNI 190
            FH+ CID WLKS+S+CPLCR+ I
Sbjct: 183 TFHVVCIDRWLKSHSNCPLCRAKI 200

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BLAST of Carg11032 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 9.2e-28
Identity = 79/223 (35.43%), Postives = 122/223 (54.71%), Query Frame = 0


Query: 3   SIGISDPSPPFNPFNFKDCSQQSCTAFCPQWCAFLFPPPPP-----FFGLDDSDDSSTFF 62
           S G+ DP  P+N +   D    + +   P W +   P P P        L   D SS+  
Sbjct: 24  SNGVCDPICPYNCYPEPD--YYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 83

Query: 63  SPLIVAVIGILASAFVLVTYYAIVSKYCRRSVGDGGGGG-----------PEESFETNRA 122
           +  I+ + G + +  +L+T + +V+K+   SV     G             EE F+    
Sbjct: 84  AISIITITGAVLA--ILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQ 143

Query: 123 INETRRSSAGSGLDEALIKSISVYKFKKGEGLIEGSDCSVCLSEFQENESLRLLPKCSHA 182
           ++        +GL +++I SI++  +K+G+GLIE +DC VCL+EF+E+ESLRLLPKC+HA
Sbjct: 144 VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHA 203

Query: 183 FHLPCIDTWLKSNSSCPLCRSNIASTN-PPPQETPPPPVTALG 209
           FH+ CIDTWL S+++CPLCR+ IA  +   P+ + P  VT  G
Sbjct: 204 FHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGG 242

[Close]

BLAST of Carg11032 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 120.2 bits (300), Expect = 3.5e-27
Identity = 78/184 (42.39%), Postives = 106/184 (57.61%), Query Frame = 0


Query: 25  SCTAFCP-QWCAFLFPPPPPFFGLDDSDDSSTFFSPLIVAVIG-ILASAFVLVTYYAIVS 84
           SC  F   ++C   +PPPPP           +   P  + V+G I+   F++   Y  ++
Sbjct: 11  SCLQFKDLRFCFRQYPPPPP---PPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHIT 70

Query: 85  KYCR---RSVGDGGGGGPEESFET-NRAINETRR--SSAGSGLDEALIKSISVYKFKKGE 144
           +  R    SV  G     E+  ET  R  ++          GL  + I SI+V  FKKGE
Sbjct: 71  QQRRISAASVTPGDTNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGE 130

Query: 145 GLIEGSDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSNSSCPLCRSNI-ASTNPP 200
           G+I+G++CSVCL+EF+E+ESLRLLPKCSHAFHL CIDTWL S+ +CPLCR+ +   T PP
Sbjct: 131 GIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEPP 190

The following BLAST results are available for this feature:

BLAST of Carg11032 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026103.1	2.4e-203	100.00	RING-H2 finger protein ATL51, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022964349.1	1.2e-202	99.72	RING-H2 finger protein ATL52-like [Cucurbita moschata]	[more]
KAG6593770.1	3.5e-202	99.45	RING-H2 finger protein ATL51, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023000254.1	4.8e-196	97.24	RING-H2 finger protein ATL52-like [Cucurbita maxima]	[more]
XP_023513580.1	3.1e-195	96.69	RING-H2 finger protein ATL52-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg11032 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF64	6.8e-60	39.95	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	2.7e-56	38.21	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q7XLY8	2.2e-50	38.50	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
P0C041	3.5e-40	45.10	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q8LFY8	1.3e-26	35.43	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]

BLAST of Carg11032 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HMW7	5.8e-203	99.72	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464384...	[more]
A0A6J1KJE3	2.3e-196	97.24	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111494536 P...	[more]
A0A6J1H2X8	9.0e-156	79.23	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111459995...	[more]
A0A6J1L482	1.1e-153	78.02	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111498996 P...	[more]
A0A6J1DSH1	1.3e-149	76.86	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11102276...	[more]

BLAST of Carg11032 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	4.9e-61	39.95	RING/U-box superfamily protein	[more]
AT3G03550.1	1.9e-57	38.21	RING/U-box superfamily protein	[more]
AT4G17905.1	2.5e-41	45.10	RING/U-box superfamily protein	[more]
AT1G72220.1	9.2e-28	35.43	RING/U-box superfamily protein	[more]
AT5G10380.1	3.5e-27	42.39	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 144..185 e-value: 6.2E-8 score: 42.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 143..186 e-value: 1.3E-13 score: 51.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 144..186 score: 13.079398
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 119..193 e-value: 2.9E-22 score: 79.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..258
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..337
None	No IPR available	PANTHER	PTHR45676:SF108	E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE	coord: 6..245
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 143..186 e-value: 6.5396E-18 score: 74.6457
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 138..192
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 6..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11032-RA	Carg11032-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane