Carg11027 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAACAGCATACGACGGCCGGGAAACAGAGGCCTGAATCCAAATCGTATATGAAAAACGAGTGCAATTCTCTTCGGGTAAGTTTCATTTTAAAATACGAAGATTTCTGTATTTCTATTTGTTTGATAATCAATTAGGGCTCGGGGAATTTGCGAGATCGATCTTCCGACGTCAGAATTTTCGTAGCGGGAAATTTAGAAGTTGAAGAAGATGAATATCTTCAGATTGGCTGGGGATATGACTCATTTGGCTAGCATTTTGGTTTTGCTCCTCAAAATTCATACTATCAAGTCTTGTGCAGGTTCGATTTCTTTCTCTGGTTTTCTTTGTTGTTTGTGTAGTTTTAGCTTTTGGCGTTGTTTTGCCGCTTGTGAACTTTGTGAACTCTGTCGTGAATTGTTGATTTCGTTGAATATGATGATTTGTTGATTCTCATTTTGTTGAATGAGGGTAGAATTTGACGAATGTTTTGTTTGGAGGGGGGTTTCGCGTTGGTTTGTTCTTGATTTTCCTGTTCTTTAGGTAATTTGATTCCTGTTACAGAACAGTAAAGTTAGGTTTCAATTTAAGCCTGATGTTTAACTGAAAGTCCAAGTATCTGAAACCTACCTATGTGATCACATCGATTGGAGAGGGTTACAAGTGTCAACGAGGACGCTAGGCCCCGAAGGGAGTGGATTGTAAGATCCTACATTGGTTGGAGAGGGGAACGAGTGTCAATGAGGACGCTAGGCCCCGAAGGGGGTGGATTGTAAGATCCCACATCGGCTGGAGAGGGGAACGAGTGTCACAAGGACGCTCAGCCTCGACGGGGGTTGATTGTAAGATCCCACATCGGTTGGAGAGGAGAATGAGTGTCAACGAGGACGCTAGGTCCCGAAGGGGGTGGATTGTAAGATCACACATCGGTTAGAGAGGGGAACGAATGTCAACGAGAACGCTAGGCCCCGAAGGGGGTGGATTGTAAGATCCCACATTGGTTGAAGAGGGGAACAAGTGCTAGTGAGGATGATAGGCCCCGAAGGGAAGTGGATTGTAAGATCTCACATCGGTTGGAGAGGGGAACAAGTGCCAGCGAGGAGGATGTACCTCAAAGGGGGTGGATTGTAAGATCACACATCAGTTGGAGAGAAGAACGAGTGTCAGCGAGGACCCTGGCCCCGAAGGTAGTTGAATTATAAGATCTCACATCAGTTGGAGAGGAGAACAAAGCATTCTTTATAAGAGTGTGGAAATCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAAGGGAAGTCGGAAAGGGAAAGCCCAAAGAGGGCAATCTACTAGCAGTAGGCTATTACAAATGCAGATTACACGAGTTTAAGTGCAAGCTTAATGTCTTTGGTTGAATGAACCCCCCACATTCTAGAGCATTTGACAAAAGTAAAAGGGATGTGAATGCGTTGAGATCTCATGGAGGCTGGCTGCTTAGTATATTAAAATCTTACGAGTTTCTTAACAAACGAATGTCGTAGGGTCAATCAAATAGTTATCCATGAGCTTAACGAAGGTAAGAGTACGCTAGTTGGGACCCGAACGCATATTTGTAGGGAAAAAAGGGATTATAAATTTGTGAAATGTGGGTCACTTTGCTTTTGATTGTTTCAGCATTAAACATGTCTTGTTGGTTCTATATGTTTGAACTCTCTTCTGACTGGAGCTGCCATGTCTACTAGCATTAACATGTCTGAATCTTTGTATTGATCCTGCAGGCATTTCTTTGAGGACTCAAGAACTTTACGCCTTGGTTTTCATTACTCGATATTTGGACATATTTGACGGATTTTCATCAATATACAATTCTATAATGAAATTAATATTCCTGGGGAGTTCTCTTTCCATTGTTTGGTACATGCGACGACACAAAGTCGTGCGTAGATCATACGACAAGGACCAGGACACATTTCGCAATCAATATATTGTGTTGCCTTGTCTACTGTTGGCACTGGTTTTTAATCATAAGTTTACGTTTAAAGAGGTACATATCTTATTCCTCTTGCATTGGATCATATCACAACTTAGAATGGAGTTCATCAAAGGAAGATATAGATGTAGCTTTGCATCATTTTCTGTTGATGTTCTATGTTAATGAATGGAAATGGGTAGGTTATGTGGACGTTTTCCCTATATCTCGAAGCTGTTGCCATTCTTCCTCAATTGGTGTTGCTACAAAGGACAAGGAATATCGACAACTTAACGGGACAATACGTCTTCCTTCTCGGGTAAAGCCTTCGCTCAATATCTTGTCATGTACATTACATTTTGATGCTAAATTGCATATGATATTGAGGGATTCTAAGCCAGGATATTATGTTCCATTGAAGGTGCATCGTGTTTTTGTCTTTTACCTCGTGTTTCGTGACACGTTTAAGCTTAATGTCTAATTTATCTGCAGATTATGTTGTGAAAGTTCTCATACCAAATCAATGCTTAGTTTGAATATTAGAGTCATGTTCTTTCTCCTTGATACAAGCCTTTGTGTTGGCTTGGTCACTTTGTCAGGGTAAGCATCTAGATTTTTTAGGACGGTTTTTCGAAAGCCTTCTGATTTTGGTTTGTTGTTTATACCTCGATTTTTGTTTTCTTGACGAATTTTTCTGAATTCGATTCATCAAAAGTTACTTGATCCATTTAAATCCATTCGAAGATACCAGTATTTGGCAAAAGCTTGAATCCGTTCTAGTTTTCATTTAAACTTAAGCCTTTGAACATACATTCATCACGTCTATTTCCTGATCTTTTCAGCTCGTACCGTGCATTGTACATATTGAATTGGGTCTACCGCTACTTCACCGAGCCAAGATTCGTTCGTTGGACAAGTATGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGCGCCCACACTCACACACAGACACACAGGCAGTCATTACCAATGAACTGAATTAGCTACTAATTGTCGAACGAATTCGCTGTTGCAGCTTGGATAGCTGGTTTCGTGCAAACGTTGCTGTATGCGGATTTCTTCTACTACTATATCGTAAGGTAAATTCTACAACTTAATGATATGATACTGTGTGTTGATGATATATATATATATATATATATATATGTCCTAAATCCTTCAATCCTTGGATGATTTGCTCCTTTTTAACTGATGTCTATCAGCTGGAAGAACAACGTGAAGCTTGAGTTACCAGCTTAGCTTTAGAGTTGTGTCTATAAAATAAAAGCTTTGGTAGAAGGGACGCAATAGTTGATGACCTGAGT TAAACAGCATACGACGGCCGGGAAACAGAGGCCTGAATCCAAATCGTATATGAAAAACGAGTGCAATTCTCTTCGGGTAAGTTTCATTTTAAAATACGAAGATTTCTGTATTTCTATTTGTTTGATAATCAATTAGGGCTCGGGGAATTTGCGAGATCGATCTTCCGACGTCAGAATTTTCGTAGCGGGAAATTTAGAAGTTGAAGAAGATGAATATCTTCAGATTGGCTGGGGATATGACTCATTTGGCTAGCATTTTGGTTTTGCTCCTCAAAATTCATACTATCAAGTCTTGTGCAGGCATTTCTTTGAGGACTCAAGAACTTTACGCCTTGGTTTTCATTACTCGATATTTGGACATATTTGACGGATTTTCATCAATATACAATTCTATAATGAAATTAATATTCCTGGGGAGTTCTCTTTCCATTGTTTGGTACATGCGACGACACAAAGTCGTGCGTAGATCATACGACAAGGACCAGGACACATTTCGCAATCAATATATTGTGTTGCCTTGTCTACTGTTGGCACTGGTTTTTAATCATAAGTTTACGTTTAAAGAGGTTATGTGGACGTTTTCCCTATATCTCGAAGCTGTTGCCATTCTTCCTCAATTGGTGTTGCTACAAAGGACAAGGAATATCGACAACTTAACGGGACAATACGTCTTCCTTCTCGGCTCGTACCGTGCATTGTACATATTGAATTGGGTCTACCGCTACTTCACCGAGCCAAGATTCGTTCGTTGGACAACTTGGATAGCTGGTTTCGTGCAAACGTTGCTGTATGCGGATTTCTTCTACTACTATATCGTAAGCTGGAAGAACAACGTGAAGCTTGAGTTACCAGCTTAGCTTTAGAGTTGTGTCTATAAAATAAAAGCTTTGGTAGAAGGGACGCAATAGTTGATGACCTGAGT ATGAATATCTTCAGATTGGCTGGGGATATGACTCATTTGGCTAGCATTTTGGTTTTGCTCCTCAAAATTCATACTATCAAGTCTTGTGCAGGCATTTCTTTGAGGACTCAAGAACTTTACGCCTTGGTTTTCATTACTCGATATTTGGACATATTTGACGGATTTTCATCAATATACAATTCTATAATGAAATTAATATTCCTGGGGAGTTCTCTTTCCATTGTTTGGTACATGCGACGACACAAAGTCGTGCGTAGATCATACGACAAGGACCAGGACACATTTCGCAATCAATATATTGTGTTGCCTTGTCTACTGTTGGCACTGGTTTTTAATCATAAGTTTACGTTTAAAGAGGTTATGTGGACGTTTTCCCTATATCTCGAAGCTGTTGCCATTCTTCCTCAATTGGTGTTGCTACAAAGGACAAGGAATATCGACAACTTAACGGGACAATACGTCTTCCTTCTCGGCTCGTACCGTGCATTGTACATATTGAATTGGGTCTACCGCTACTTCACCGAGCCAAGATTCGTTCGTTGGACAACTTGGATAGCTGGTTTCGTGCAAACGTTGCTGTATGCGGATTTCTTCTACTACTATATCGTAAGCTGGAAGAACAACGTGAAGCTTGAGTTACCAGCTTAG MNIFRLAGDMTHLASILVLLLKIHTIKSCAGISLRTQELYALVFITRYLDIFDGFSSIYNSIMKLIFLGSSLSIVWYMRRHKVVRRSYDKDQDTFRNQYIVLPCLLLALVFNHKFTFKEVMWTFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFLLGSYRALYILNWVYRYFTEPRFVRWTTWIAGFVQTLLYADFFYYYIVSWKNNVKLELPA Homology
BLAST of Carg11027 vs. NCBI nr
Match: KAG7026108.1 (ER lumen protein-retaining receptor [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 427.9 bits (1099), Expect = 5.0e-116 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Carg11027 vs. NCBI nr
Match: KAG6593777.1 (ER lumen protein-retaining receptor, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 427.6 bits (1098), Expect = 6.6e-116 Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Carg11027 vs. NCBI nr
Match: XP_022999866.1 (ER lumen protein-retaining receptor-like [Cucurbita maxima] >XP_022999867.1 ER lumen protein-retaining receptor-like [Cucurbita maxima] >XP_022999868.1 ER lumen protein-retaining receptor-like [Cucurbita maxima]) HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115 Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Carg11027 vs. NCBI nr
Match: XP_022964264.1 (ER lumen protein-retaining receptor-like [Cucurbita moschata] >XP_022964265.1 ER lumen protein-retaining receptor-like [Cucurbita moschata] >XP_022964266.1 ER lumen protein-retaining receptor-like [Cucurbita moschata]) HSP 1 Score: 424.9 bits (1091), Expect = 4.2e-115 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Carg11027 vs. NCBI nr
Match: XP_023513912.1 (ER lumen protein-retaining receptor-like [Cucurbita pepo subsp. pepo] >XP_023513913.1 ER lumen protein-retaining receptor-like [Cucurbita pepo subsp. pepo] >XP_023513914.1 ER lumen protein-retaining receptor-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 423.3 bits (1087), Expect = 1.2e-114 Identity = 212/215 (98.60%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Carg11027 vs. ExPASy Swiss-Prot
Match: Q9ZTN2 (ER lumen protein-retaining receptor OS=Petunia hybrida OX=4102 GN=ERD2 PE=2 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 2.1e-104 Identity = 183/215 (85.12%), Postives = 199/215 (92.56%), Query Frame = 0
BLAST of Carg11027 vs. ExPASy Swiss-Prot
Match: Q8VWI1 (ER lumen protein-retaining receptor B OS=Arabidopsis thaliana OX=3702 GN=ERD2B PE=1 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 4.9e-98 Identity = 172/215 (80.00%), Postives = 193/215 (89.77%), Query Frame = 0
BLAST of Carg11027 vs. ExPASy Swiss-Prot
Match: P35402 (ER lumen protein-retaining receptor A OS=Arabidopsis thaliana OX=3702 GN=ERD2A PE=2 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 3.9e-87 Identity = 152/215 (70.70%), Postives = 181/215 (84.19%), Query Frame = 0
BLAST of Carg11027 vs. ExPASy Swiss-Prot
Match: O76767 (ER lumen protein-retaining receptor OS=Drosophila melanogaster OX=7227 GN=KdelR PE=2 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 1.4e-57 Identity = 113/215 (52.56%), Postives = 159/215 (73.95%), Query Frame = 0
BLAST of Carg11027 vs. ExPASy Swiss-Prot
Match: Q611C8 (ER lumen protein-retaining receptor OS=Caenorhabditis briggsae OX=6238 GN=erd-2 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 7.9e-56 Identity = 110/202 (54.46%), Postives = 148/202 (73.27%), Query Frame = 0
BLAST of Carg11027 vs. ExPASy TrEMBL
Match: A0A6J1KBZ0 (ER lumen protein-retaining receptor OS=Cucurbita maxima OX=3661 GN=LOC111494212 PE=3 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 7.1e-116 Identity = 214/215 (99.53%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Carg11027 vs. ExPASy TrEMBL
Match: A0A6J1HIF6 (ER lumen protein-retaining receptor OS=Cucurbita moschata OX=3662 GN=LOC111464334 PE=3 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 2.1e-115 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Carg11027 vs. ExPASy TrEMBL
Match: A0A6J1KVF5 (ER lumen protein-retaining receptor-like OS=Cucurbita maxima OX=3661 GN=LOC111499065 PE=3 SV=1) HSP 1 Score: 396.7 bits (1018), Expect = 6.0e-107 Identity = 196/215 (91.16%), Postives = 206/215 (95.81%), Query Frame = 0
BLAST of Carg11027 vs. ExPASy TrEMBL
Match: A0A0A0LI81 (ER lumen protein-retaining receptor OS=Cucumis sativus OX=3659 GN=Csa_2G139800 PE=3 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.3e-106 Identity = 196/215 (91.16%), Postives = 205/215 (95.35%), Query Frame = 0
BLAST of Carg11027 vs. ExPASy TrEMBL
Match: A0A6J1H4T8 (ER lumen protein-retaining receptor-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460406 PE=3 SV=1) HSP 1 Score: 394.4 bits (1012), Expect = 3.0e-106 Identity = 195/215 (90.70%), Postives = 205/215 (95.35%), Query Frame = 0
BLAST of Carg11027 vs. TAIR 10
Match: AT3G25040.1 (endoplasmic reticulum retention defective 2B ) HSP 1 Score: 358.6 bits (919), Expect = 3.5e-99 Identity = 172/215 (80.00%), Postives = 193/215 (89.77%), Query Frame = 0
BLAST of Carg11027 vs. TAIR 10
Match: AT1G29330.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 322.4 bits (825), Expect = 2.8e-88 Identity = 152/215 (70.70%), Postives = 181/215 (84.19%), Query Frame = 0
BLAST of Carg11027 vs. TAIR 10
Match: AT3G25160.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 111.3 bits (277), Expect = 9.7e-25 Identity = 74/227 (32.60%), Postives = 124/227 (54.63%), Query Frame = 0
BLAST of Carg11027 vs. TAIR 10
Match: AT4G38790.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23 Identity = 82/229 (35.81%), Postives = 125/229 (54.59%), Query Frame = 0
BLAST of Carg11027 vs. TAIR 10
Match: AT1G75760.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22 Identity = 74/215 (34.42%), Postives = 119/215 (55.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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