Carg10975 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10975
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	60S ribosomal protein L14-2-like
Location	Carg_Chr08: 6342671 .. 6344434 (+)
RNA-Seq Expression	Carg10975
Synteny	Carg10975

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCGTCTCCCCTCTATCGCGCCGCTGCTCTCACAGTTGCTTACGTCAAACAAGCCGCGAAAATGGTGAGATTCTCTCTGCAAATCGCGTCTTCTTTTTCTTTTAACTCTACATTCATCATGATCGTTTCAATCTGTTCATTTTGGTCATTGGTTGTGCTTGTTTAGCCGTTTAAGAGGTATGTCGAGATCGGAAGGGTTGCCCTCGTCAACTATGGTGAAGACTACGGAAAGCTCGTTGTCATCGTTGATGTTATCGACCAGAATCGGGTAGGCATTCGTTTCCTGTAATCAAGTTTTTATGTAGTGTTATAGTTCGTTCTGGTTTTCTAAGTACTACATAATTGCTACGTTGTACTCGTATTGAACTGTTTTTGTGTTGTTATTATGCTTTCTGAATATCATTTTTAGGTTTGACATTTGAAATTATGAAAGTTTGATTTTTCTTTAAGAACTTGATAGTGGTGGTTGTCATTTCTTCTCGATCATTCTCCATTAGTTGATTCAAGTGTTCTTTTAATTTATGCAACTTGGTGTTTTGTTGCTTATCTACAGAAGTATTATTTTTATATTCTGTAGTAATTTGCAACCTTTTTTTCTTTTAGAATGATAGTTCTATCAATTTGGTTTTTTAATCTCTCATTGATTAGTCTCTTTATGGAAAATTTTGTTAAATCATTTGCATGAGCTTGACTAGCTAATTTTTGTGTTTTCCAGGCTCTGGTTGATGCCCCTGATATGGAGCGATCTCAAATGAACTTTAAGAGACTCTCCCTGACAGATATCAAAATTGATATTAAAAGGGTCCCTAAGAAGAAGGAGCTGATTGAAGCCATGAAAGCTGGGGGTATGCTGCAATTTGTTATGAGCGTTTACTTTTAGTTTTATTTGCTTGTGCTTAAGTGTTTTTCTATCCATTCAGATGTTCAGAAGAAATGGGAAGATAGTTCATGGGGCAGAAAATTGATTGTTAAGAAGAGAAGAGCCTCTCTCAACGACTTCGACAGGTTCAAGCTTATGTTGGCCAAGATTAAGGTTTGTTCTGATTATCTTCTTTTTCATTTTCCTGATTTTTTTTTTAAAAATTCAAGTGCTAATATCCTTATGGGCTTTGATTGATTTATGCAGAGGGCAGGATTGGTTAGGCAAGAGCTTTCGAAGTTGAAGAAGGCCGAGGCCTAGAGGTTCATTTTTTCAATGGATTTTCCCATTTTGCTGTCAACTTTCTTTAACATCTATAAGTCGTTGATTTATAGATCCAAACTTTTTGTAGCAGTATCATTGCCTTTTAAGTCATTGTGTTCAACTTCGTCCATTTTTAATCTTAATACGCCAATTTCTTATTTGGATTTCAATTGTTATCACTTTATCATCCTCTTTGTAAAAGGCCCTTATGATTAATTGGCTTGAATGCGAATTCTCGTCTTTCATTTGTTGGGGAAAGTGATACTAGAAAGGTGAGAGTTCCTGAGTTGTTATGAGTTAATGGTTAGGAATCTCAACTCTCTACCCTTGTATGTTATTGTGCATAGGTTCTTATGGCTTTATCTTGGACTTTCTAGGTTCTTACGGCTTTATCTTGGACTTTCTAGGTTCTTACGTTTATCTTGGACTTTTCTAGCGGCTTTATCTTGGACTTTCCTAGGTTCTTACGGCTTTATCTTGGACTTTCTAGGTTCTTACGGCTTTATCTTGGACTTTCTAGGTTCTTACGGCTTTATCTTGGACTTTCTAGGTTCTTACGGCTTTATCTTGGACTTTCTAGG

mRNA sequence

TCCGTCTCCCCTCTATCGCGCCGCTGCTCTCACAGTTGCTTACGTCAAACAAGCCGCGAAAATGCCGTTTAAGAGGTATGTCGAGATCGGAAGGGTTGCCCTCGTCAACTATGGTGAAGACTACGGAAAGCTCGTTGTCATCGTTGATGTTATCGACCAGAATCGGGCTCTGGTTGATGCCCCTGATATGGAGCGATCTCAAATGAACTTTAAGAGACTCTCCCTGACAGATATCAAAATTGATATTAAAAGGGTCCCTAAGAAGAAGGAGCTGATTGAAGCCATGAAAGCTGGGGATGTTCAGAAGAAATGGGAAGATAGTTCATGGGGCAGAAAATTGATTGTTAAGAAGAGAAGAGCCTCTCTCAACGACTTCGACAGGTTCAAGCTTATGTTGGCCAAGATTAAGAGGGCAGGATTGGTTAGGCAAGAGCTTTCGAAGTTGAAGAAGGCCGAGGCCTAGAGGTTCATTTTTTCAATGGATTTTCCCATTTTGCTGTCAACTTTCTTTAACATCTATAAGTCGTTGATTTATAGATCCAAACTTTTTGTAGCAGTATCATTGCCTTTTAAGTCATTGTGTTCAACTTCGTCCATTTTTAATCTTAATACGCCAATTTCTTATTTGGATTTCAATTGTTATCACTTTATCATCCTCTTTGTAAAAGGCCCTTATGATTAATTGGCTTGAATGCGAATTCTCGTCTTTCATTTGTTGGGGAAAGTGATACTAGAAAGGTGAGAGTTCCTGAGTTGTTATGAGTTAATGGTTAGGAATCTCAACTCTCTACCCTTGTATGTTATTGTGCATAGGTTCTTATGGCTTTATCTTGGACTTTCTAGGTTCTTACGGCTTTATCTTGGACTTTCTAGGTTCTTACGGCTTTATCTTGGACTTTCTAGGTTCTTACGGCTTTATCTTGGACTTTCTAGGTTCTTACGGCTTTATCTTGGACTTTCTAGG

Coding sequence (CDS)

ATGCCGTTTAAGAGGTATGTCGAGATCGGAAGGGTTGCCCTCGTCAACTATGGTGAAGACTACGGAAAGCTCGTTGTCATCGTTGATGTTATCGACCAGAATCGGGCTCTGGTTGATGCCCCTGATATGGAGCGATCTCAAATGAACTTTAAGAGACTCTCCCTGACAGATATCAAAATTGATATTAAAAGGGTCCCTAAGAAGAAGGAGCTGATTGAAGCCATGAAAGCTGGGGATGTTCAGAAGAAATGGGAAGATAGTTCATGGGGCAGAAAATTGATTGTTAAGAAGAGAAGAGCCTCTCTCAACGACTTCGACAGGTTCAAGCTTATGTTGGCCAAGATTAAGAGGGCAGGATTGGTTAGGCAAGAGCTTTCGAAGTTGAAGAAGGCCGAGGCCTAG

Protein sequence

MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGLVRQELSKLKKAEA

Homology

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BLAST of Carg10975 vs. NCBI nr
Match: XP_022959508.1 (60S ribosomal protein L14-2-like [Cucurbita moschata] >XP_022963995.1 60S ribosomal protein L14-2-like [Cucurbita moschata] >XP_023000562.1 60S ribosomal protein L14-2-like [Cucurbita maxima] >XP_023513560.1 60S ribosomal protein L14-2-like [Cucurbita pepo subsp. pepo] >XP_023547638.1 60S ribosomal protein L14-2-like [Cucurbita pepo subsp. pepo] >KAG7013478.1 60S ribosomal protein L14-2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7026159.1 60S ribosomal protein L14-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 254.2 bits (648), Expect = 6.1e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VRQELSKLKKAEA
Sbjct: 121 VRQELSKLKKAEA 133

[Close]

BLAST of Carg10975 vs. NCBI nr
Match: KAG6574906.1 (Kinesin-like protein KIN-10A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.2 bits (648), Expect = 6.1e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 851 MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 910

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 911 DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 970

Query: 121 VRQELSKLKKAEA 134
           VRQELSKLKKAEA
Sbjct: 971 VRQELSKLKKAEA 983

[Close]

BLAST of Carg10975 vs. NCBI nr
Match: KAG6593830.1 (Kinesin-like protein KIN-10A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.2 bits (648), Expect = 6.1e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 842 MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 901

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 902 DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 961

Query: 121 VRQELSKLKKAEA 134
           VRQELSKLKKAEA
Sbjct: 962 VRQELSKLKKAEA 974

[Close]

BLAST of Carg10975 vs. NCBI nr
Match: XP_023006320.1 (60S ribosomal protein L14-2-like [Cucurbita maxima])

HSP 1 Score: 252.3 bits (643), Expect = 2.3e-63
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VRQELSKLKKAEA
Sbjct: 121 VRQELSKLKKAEA 133

[Close]

BLAST of Carg10975 vs. NCBI nr
Match: BAA83469.1 (Csf-1, partial [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 8.9e-63
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELSKLKKAEA 134
           VRQEL+KLKKAEA
Sbjct: 126 VRQELAKLKKAEA 138

[Close]

BLAST of Carg10975 vs. ExPASy Swiss-Prot
Match: Q9T043 (60S ribosomal protein L14-2 OS=Arabidopsis thaliana OX=3702 GN=RPL14B PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.2e-55
Identity = 111/130 (85.38%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDMER QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLKK
Sbjct: 121 VRQELAKLKK 130

[Close]

BLAST of Carg10975 vs. ExPASy Swiss-Prot
Match: Q9SIM4 (60S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-54
Identity = 110/130 (84.62%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDMER QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLK+
Sbjct: 121 VRQELAKLKR 130

[Close]

BLAST of Carg10975 vs. ExPASy Swiss-Prot
Match: P55844 (Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.6e-54
Identity = 108/133 (81.20%), Postives = 122/133 (91.73%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKR+VEIGRVAL+NYG+DYG+LVVIVDVIDQ RALVDAPDMERS +NFKRLSLTD+KI
Sbjct: 1   MPFKRFVEIGRVALINYGKDYGRLVVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKK+LI+A++A DV+ KW  SSWGRKLIVKK RA+LNDFDRFK+MLAKIKRA  
Sbjct: 61  DIKRVPKKKDLIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAG 120

Query: 121 VRQELSKLKKAEA 134
           VRQEL+KLKK  A
Sbjct: 121 VRQELAKLKKTAA 133

[Close]

BLAST of Carg10975 vs. ExPASy Swiss-Prot
Match: O46160 (60S ribosomal protein L14 OS=Lumbricus rubellus OX=35632 GN=RPL14 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.1e-26
Identity = 67/133 (50.38%), Postives = 87/133 (65.41%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAP--DMERSQMNFKRLSLTDI 60
           M F+R+VEIGRVA   YG D GKLV IVDVIDQNRALVD P   + R  MNFK L LT++
Sbjct: 1   MSFRRFVEIGRVARAVYGPDQGKLVAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNL 60

Query: 61  KIDIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRA 120
           K       K   + +A +  ++ KKWE+S   +K+  K++R +L DF+RFKLM AK  R 
Sbjct: 61  KAKFPHSAKTGVVKKAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARN 120

Query: 121 GLVRQELSKLKKA 132
            L++ E  KL+KA
Sbjct: 121 RLIKIEFGKLRKA 133

[Close]

BLAST of Carg10975 vs. ExPASy Swiss-Prot
Match: Q7XYA7 (60S ribosomal protein L14 OS=Griffithsia japonica OX=83288 GN=RPL14 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-25
Identity = 64/132 (48.48%), Postives = 92/132 (69.70%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPD--MERSQMNFKRLSLTDI 60
           M F R+VE GRVALV+YGE   KLVVIVD++DQNR LVD+P   ++R  +N KR++LT I
Sbjct: 1   MTFTRFVEAGRVALVSYGEHLNKLVVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSI 60

Query: 61  KI-DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKR 120
           K+ DI R     E+     A  V + +  S WG+KL  +++RA+L+DF RFK+M+A++K+
Sbjct: 61  KVDDIARGAPVAEVKSKYTAAKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKK 120

Query: 121 AGLVRQELSKLK 130
           +  +  EL+KLK
Sbjct: 121 SKAINAELAKLK 132

[Close]

BLAST of Carg10975 vs. ExPASy TrEMBL
Match: A0A6J1HJJ9 (60S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111464148 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VRQELSKLKKAEA
Sbjct: 121 VRQELSKLKKAEA 133

[Close]

BLAST of Carg10975 vs. ExPASy TrEMBL
Match: A0A6J1KDZ6 (60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111494804 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VRQELSKLKKAEA
Sbjct: 121 VRQELSKLKKAEA 133

[Close]

BLAST of Carg10975 vs. ExPASy TrEMBL
Match: A0A6J1KZT6 (60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111499090 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63
Identity = 132/133 (99.25%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VRQELSKLKKAEA
Sbjct: 121 VRQELSKLKKAEA 133

[Close]

BLAST of Carg10975 vs. ExPASy TrEMBL
Match: A0A0A0LIH9 (Ribosomal_L14e domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G173070 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.3e-63
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 61  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120

Query: 121 VRQELSKLKKAEA 134
           VRQEL+KLKKAEA
Sbjct: 121 VRQELAKLKKAEA 133

[Close]

BLAST of Carg10975 vs. ExPASy TrEMBL
Match: Q9SXL9 (Csf-1 protein (Fragment) OS=Cucumis sativus OX=3659 GN=Csf-1 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.3e-63
Identity = 129/133 (96.99%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           MPFKRYVEIGR+AL+NYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI
Sbjct: 6   MPFKRYVEIGRIALINYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 65

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DIKRVPKKKELIEAMKAGDVQKKWE+SSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL
Sbjct: 66  DIKRVPKKKELIEAMKAGDVQKKWENSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 125

Query: 121 VRQELSKLKKAEA 134
           VRQEL+KLKKAEA
Sbjct: 126 VRQELAKLKKAEA 138

[Close]

BLAST of Carg10975 vs. TAIR 10
Match: AT4G27090.1 (Ribosomal protein L14 )

HSP 1 Score: 215.7 bits (548), Expect = 2.3e-56
Identity = 111/130 (85.38%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKRYVEIGRVALVNYGED+GKLVVIVDV+DQNRALVDAPDMER QMNFKRLSLTDI I
Sbjct: 1   MGFKRYVEIGRVALVNYGEDHGKLVVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIK+AG+
Sbjct: 61  DINRVPKKKALIEAMEKADVKNKWEKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGV 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLKK
Sbjct: 121 VRQELAKLKK 130

[Close]

BLAST of Carg10975 vs. TAIR 10
Match: AT2G20450.1 (Ribosomal protein L14 )

HSP 1 Score: 213.8 bits (543), Expect = 8.6e-56
Identity = 110/130 (84.62%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   MPFKRYVEIGRVALVNYGEDYGKLVVIVDVIDQNRALVDAPDMERSQMNFKRLSLTDIKI 60
           M FKR+VEIGRVALVNYGEDYGKLVVIVDV+DQNRALVDAPDMER QMN KRLSLTDI I
Sbjct: 1   MGFKRFVEIGRVALVNYGEDYGKLVVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVI 60

Query: 61  DIKRVPKKKELIEAMKAGDVQKKWEDSSWGRKLIVKKRRASLNDFDRFKLMLAKIKRAGL 120
           DI RVPKKK LIEAM+  DV+ KWE SSWGRKLIV+KRRA+LNDFDRFK+MLAKIKRAG+
Sbjct: 61  DINRVPKKKVLIEAMEKADVKNKWEKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGI 120

Query: 121 VRQELSKLKK 131
           VRQEL+KLK+
Sbjct: 121 VRQELAKLKR 130

The following BLAST results are available for this feature:

BLAST of Carg10975 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959508.1	6.1e-64	100.00	60S ribosomal protein L14-2-like [Cucurbita moschata] >XP_022963995.1 60S riboso...	[more]
KAG6574906.1	6.1e-64	100.00	Kinesin-like protein KIN-10A, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6593830.1	6.1e-64	100.00	Kinesin-like protein KIN-10A, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023006320.1	2.3e-63	99.25	60S ribosomal protein L14-2-like [Cucurbita maxima]	[more]
BAA83469.1	8.9e-63	96.99	Csf-1, partial [Cucumis sativus]	[more]

BLAST of Carg10975 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9T043	3.2e-55	85.38	60S ribosomal protein L14-2 OS=Arabidopsis thaliana OX=3702 GN=RPL14B PE=1 SV=1	[more]
Q9SIM4	1.2e-54	84.62	60S ribosomal protein L14-1 OS=Arabidopsis thaliana OX=3702 GN=RPL14A PE=2 SV=1	[more]
P55844	4.6e-54	81.20	Probable 60S ribosomal protein L14 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
O46160	3.1e-26	50.38	60S ribosomal protein L14 OS=Lumbricus rubellus OX=35632 GN=RPL14 PE=3 SV=1	[more]
Q7XYA7	5.8e-25	48.48	60S ribosomal protein L14 OS=Griffithsia japonica OX=83288 GN=RPL14 PE=2 SV=1	[more]

BLAST of Carg10975 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJJ9	3.0e-64	100.00	60S ribosomal protein L14-2-like OS=Cucurbita moschata OX=3662 GN=LOC111464148 P...	[more]
A0A6J1KDZ6	3.0e-64	100.00	60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111494804 PE=...	[more]
A0A6J1KZT6	1.1e-63	99.25	60S ribosomal protein L14-2-like OS=Cucurbita maxima OX=3661 GN=LOC111499090 PE=...	[more]
A0A0A0LIH9	4.3e-63	96.99	Ribosomal_L14e domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G173...	[more]
Q9SXL9	4.3e-63	96.99	Csf-1 protein (Fragment) OS=Cucumis sativus OX=3659 GN=Csf-1 PE=2 SV=1	[more]

BLAST of Carg10975 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27090.1	2.3e-56	85.38	Ribosomal protein L14	[more]
AT2G20450.1	8.6e-56	84.62	Ribosomal protein L14	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 1..84 e-value: 4.7E-38 score: 131.2
IPR002784	Ribosomal protein L14e domain	PFAM	PF01929	Ribosomal_L14e	coord: 45..117 e-value: 3.5E-25 score: 88.3
None	No IPR available	GENE3D	6.10.250.2270		coord: 92..127 e-value: 2.0E-11 score: 45.4
None	No IPR available	PANTHER	PTHR11127:SF11	RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED	coord: 1..132
IPR039660	Ribosomal protein L14	PANTHER	PTHR11127	60S RIBOSOMAL PROTEIN L14	coord: 1..132
IPR041985	Ribosomal protein L14, KOW motif	CDD	cd06088	KOW_RPL14	coord: 7..77 e-value: 1.71093E-20 score: 77.1306
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 5..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10975-RA	Carg10975-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003774	cytoskeletal motor activity
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome