Carg10922 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10922
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	MYB transcription factor
Location	Carg_Chr05: 11322755 .. 11323782 (-)
RNA-Seq Expression	Carg10922
Synteny	Carg10922

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGAGTAAAGAGATGAAGCAACAGCTGAAGAAAAATTTGTGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGCGAAGGGAATTGGGCGACTGTCTCCCAGGAATCAGGTAAGAAATTTGGCTACAAAAATGTCTAATAACCAATATAAAATGCGCCAGTCATTTCTATATCCGCTATATTCATCTTTCTCAGAACTCTATAGCACGATGGATGGATCTTTTAAAAATGTTACACATATATCAGGAATTAGAGTTTTCATTCATGTGTGACTGTGTGTGAGCTTTCCTCCCTTGCCTCTCAGGTTTGATGCGAGGTGGGAAAAGCTGCAGGCTAAGATGGAAGAATTACCTCAGGCCTAATATAAAACGTGGGGAGATGTCCAAAGAGGAAGAGGATCTAATTATCCGTATGCACAAACTTTTAGGCAACAGGTCAGTTTGTATTGCTTTAACCTCTCAAAAGCTTAATCCATACTTACAGTAAAGAGAGACAACTTGCTGAATGTTTGAATATTTTCAACGTGTTACTTCTTGAATCAGATGGTCATTGATTGCTGGTCGGCTTCCTGGTCGAACTGATAATGAGGTGAAGAACTACTGGAATACCCATTTGAACAAGAATGGCCTGCAAGATAAAAGAAAAGCTAATGACTCAAACAGCCACAAGAAAAATGACAACGACAACGACGATGATGTGAATAATAAGAAGCAGAAGAAAGTTATCAATCAGACTGGTTATCCTCAGCCACCAATATGCATTGACAACGGGATAAATTTGGCTCATGATACACAGAGAAGAAACCAGGAAGAGAACAGAGAAGTTACAGAACCTTGGAATATGGATGACATAACAAGTTCTCATTATAATATAAACTCTCCAATAGTACCTGCAAATGACGCGACATTTAATTTTGACGACGAGCATTACTTTGACCACCTCGATCCCTTCTTCCTGTTAGAAGCATTTGGATGCAGTAGTGTTCATGCATCACTGGATAACATGTAA

mRNA sequence

ATGGAGGAGAGTAAAGAGATGAAGCAACAGCTGAAGAAAAATTTGTGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGCGAAGGGAATTGGGCGACTGTCTCCCAGGAATCAGGTTTGATGCGAGGTGGGAAAAGCTGCAGGCTAAGATGGAAGAATTACCTCAGGCCTAATATAAAACGTGGGGAGATGTCCAAAGAGGAAGAGGATCTAATTATCCGTATGCACAAACTTTTAGGCAACAGATGGTCATTGATTGCTGGTCGGCTTCCTGGTCGAACTGATAATGAGGTGAAGAACTACTGGAATACCCATTTGAACAAGAATGGCCTGCAAGATAAAAGAAAAGCTAATGACTCAAACAGCCACAAGAAAAATGACAACGACAACGACGATGATGTGAATAATAAGAAGCAGAAGAAAGTTATCAATCAGACTGGTTATCCTCAGCCACCAATATGCATTGACAACGGGATAAATTTGGCTCATGATACACAGAGAAGAAACCAGGAAGAGAACAGAGAAGTTACAGAACCTTGGAATATGGATGACATAACAAGTTCTCATTATAATATAAACTCTCCAATAGTACCTGCAAATGACGCGACATTTAATTTTGACGACGAGCATTACTTTGACCACCTCGATCCCTTCTTCCTGTTAGAAGCATTTGGATGCAGTAGTGTTCATGCATCACTGGATAACATGTAA

Coding sequence (CDS)

ATGGAGGAGAGTAAAGAGATGAAGCAACAGCTGAAGAAAAATTTGTGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGCGAAGGGAATTGGGCGACTGTCTCCCAGGAATCAGGTTTGATGCGAGGTGGGAAAAGCTGCAGGCTAAGATGGAAGAATTACCTCAGGCCTAATATAAAACGTGGGGAGATGTCCAAAGAGGAAGAGGATCTAATTATCCGTATGCACAAACTTTTAGGCAACAGATGGTCATTGATTGCTGGTCGGCTTCCTGGTCGAACTGATAATGAGGTGAAGAACTACTGGAATACCCATTTGAACAAGAATGGCCTGCAAGATAAAAGAAAAGCTAATGACTCAAACAGCCACAAGAAAAATGACAACGACAACGACGATGATGTGAATAATAAGAAGCAGAAGAAAGTTATCAATCAGACTGGTTATCCTCAGCCACCAATATGCATTGACAACGGGATAAATTTGGCTCATGATACACAGAGAAGAAACCAGGAAGAGAACAGAGAAGTTACAGAACCTTGGAATATGGATGACATAACAAGTTCTCATTATAATATAAACTCTCCAATAGTACCTGCAAATGACGCGACATTTAATTTTGACGACGAGCATTACTTTGACCACCTCGATCCCTTCTTCCTGTTAGAAGCATTTGGATGCAGTAGTGTTCATGCATCACTGGATAACATGTAA

Protein sequence

MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENREVTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDNM

Homology

[Close]

BLAST of Carg10922 vs. NCBI nr
Match: KAG7030370.1 (Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 496.5 bits (1277), Expect = 1.3e-136
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180
           KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE
Sbjct: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180

Query: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240
           VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN
Sbjct: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240

Query: 241 M 242
           M
Sbjct: 241 M 241

[Close]

BLAST of Carg10922 vs. NCBI nr
Match: KAG6599384.1 (Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 496.5 bits (1277), Expect = 1.3e-136
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 0


Query: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 13  MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 72

Query: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 73  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 132

Query: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180
           KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE
Sbjct: 133 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 192

Query: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240
           VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN
Sbjct: 193 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 252

Query: 241 M 242
           M
Sbjct: 253 M 253

[Close]

BLAST of Carg10922 vs. NCBI nr
Match: XP_022946431.1 (transcription factor MYB82 [Cucurbita moschata])

HSP 1 Score: 488.4 bits (1256), Expect = 3.5e-134
Identity = 238/241 (98.76%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180
           KANDSNSHKKND+DNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEE RE
Sbjct: 121 KANDSNSHKKNDDDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEEKRE 180

Query: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240
           VTEPWNMDDITSSHYNINSPIVPANDATFNFDDE YFDHLDPFFLLEAFGCSSVHASLDN
Sbjct: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEPYFDHLDPFFLLEAFGCSSVHASLDN 240

Query: 241 M 242
           M
Sbjct: 241 M 241

[Close]

BLAST of Carg10922 vs. NCBI nr
Match: XP_023545990.1 (transcription factor MYB82 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 483.4 bits (1243), Expect = 1.1e-132
Identity = 236/241 (97.93%), Postives = 238/241 (98.76%), Query Frame = 0


Query: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180
           KANDSNSHKKND+DNDDDVNNKKQKKVINQT YPQPPICIDNG NLAHDTQRRNQEENRE
Sbjct: 121 KANDSNSHKKNDDDNDDDVNNKKQKKVINQTCYPQPPICIDNGKNLAHDTQRRNQEENRE 180

Query: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240
           VT+PWNMDDITSSHYNINSPIVPANDATFNFDDE YFDHLDPFFLLEAFGCSSVHASLDN
Sbjct: 181 VTDPWNMDDITSSHYNINSPIVPANDATFNFDDEPYFDHLDPFFLLEAFGCSSVHASLDN 240

Query: 241 M 242
           M
Sbjct: 241 M 241

[Close]

BLAST of Carg10922 vs. NCBI nr
Match: XP_022999279.1 (transcription factor MYB82 [Cucurbita maxima])

HSP 1 Score: 479.2 bits (1232), Expect = 2.1e-131
Identity = 235/241 (97.51%), Postives = 236/241 (97.93%), Query Frame = 0


Query: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180
           KANDSNSH KND+DNDDDVNNKKQKKVINQT YPQPPICIDNGINLAHDTQRRNQEENRE
Sbjct: 121 KANDSNSHMKNDDDNDDDVNNKKQKKVINQTCYPQPPICIDNGINLAHDTQRRNQEENRE 180

Query: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240
           VTEPWNMDDITSSHYNINSPIV ANDATFNFDDE YFDHLDP FLLEAFGCSSVHASLDN
Sbjct: 181 VTEPWNMDDITSSHYNINSPIVHANDATFNFDDEPYFDHLDPLFLLEAFGCSSVHASLDN 240

Query: 241 M 242
           M
Sbjct: 241 M 241

[Close]

BLAST of Carg10922 vs. ExPASy Swiss-Prot
Match: Q9LTF7 (Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.1e-49
Identity = 92/121 (76.03%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 5   KEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNI 64
           +E K  +K+ LWKPEED+IL++YVETHGEGNWA +S+ SGL RGGKSCRLRWKNYLRPNI
Sbjct: 6   EEGKSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNI 65

Query: 65  KRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKAND 124
           KRG MS +E+DLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK     ++ A +
Sbjct: 66  KRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQNAPE 125

Query: 125 S 126
           S
Sbjct: 126 S 126

[Close]

BLAST of Carg10922 vs. ExPASy Swiss-Prot
Match: Q96276 (Transcription factor MYB23 OS=Arabidopsis thaliana OX=3702 GN=MYB23 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.9e-38
Identity = 74/116 (63.79%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 8   KQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           + + KK LW  EED IL +YV THG+G+W  +++++GL R GKSCRLRW NYL PN+ RG
Sbjct: 9   EHEYKKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRG 68

Query: 68  EMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKN-GLQDKRKA 123
             + +EEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+K  GL D   A
Sbjct: 69  NFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGLGDHSTA 124

[Close]

BLAST of Carg10922 vs. ExPASy Swiss-Prot
Match: Q9FJA2 (Transcription factor TT2 OS=Arabidopsis thaliana OX=3702 GN=TT2 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.4e-37
Identity = 74/128 (57.81%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 8   KQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           +++L +  W   ED ILR+Y+ THGEG W+T+  ++GL R GKSCRLRWKNYLRP IKRG
Sbjct: 11  REELNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRG 70

Query: 68  EMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKANDSNS 127
            +S +EE+LIIR+H LLGNRWSLIAGRLPGRTDNE+KN+WN++L K   + + K      
Sbjct: 71  NISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPKTQTKQPKRIK 130

Query: 128 HKKNDNDN 136
           H  N+ +N
Sbjct: 131 HSTNNENN 138

[Close]

BLAST of Carg10922 vs. ExPASy Swiss-Prot
Match: A0A4D6Q411 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.1e-37
Identity = 69/106 (65.09%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 8   KQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           K+ + +  W   ED IL  Y++THGEG W ++ + +GL R GKSCRLRW NYLRP IKRG
Sbjct: 9   KEGMNRGAWASMEDKILVTYIKTHGEGKWRSLPKRAGLKRCGKSCRLRWLNYLRPGIKRG 68

Query: 68  EMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK 114
            +S++EEDLIIR+H LLGNRWSLIAGRLPGRTDNE+KNYWNT+L +
Sbjct: 69  NISEDEEDLIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGR 114

[Close]

BLAST of Carg10922 vs. ExPASy Swiss-Prot
Match: Q38850 (Transcription repressor MYB5 OS=Arabidopsis thaliana OX=3702 GN=MYB5 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.2e-37
Identity = 79/151 (52.32%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 8   KQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           K  +K+  W  EED IL ++++  GEG W ++ + +GL+R GKSCRLRW NYLRP++KRG
Sbjct: 20  KMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRG 79

Query: 68  EMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKANDSNS 127
            ++ +EEDLI+R+H+LLGNRWSLIAGR+PGRTDNE+KNYWNTHL K  L   R+  D  +
Sbjct: 80  GITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLL---RQGIDPQT 139

Query: 128 HKKNDNDNDDDVNNKKQKKVINQTGYPQPPI 159
           HK  D +N     +K +++V     YP  PI
Sbjct: 140 HKPLDANN----IHKPEEEVSGGQKYPLEPI 163

[Close]

BLAST of Carg10922 vs. ExPASy TrEMBL
Match: A0A6J1G3P0 (transcription factor MYB82 OS=Cucurbita moschata OX=3662 GN=LOC111450489 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.7e-134
Identity = 238/241 (98.76%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180
           KANDSNSHKKND+DNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEE RE
Sbjct: 121 KANDSNSHKKNDDDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEEKRE 180

Query: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240
           VTEPWNMDDITSSHYNINSPIVPANDATFNFDDE YFDHLDPFFLLEAFGCSSVHASLDN
Sbjct: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEPYFDHLDPFFLLEAFGCSSVHASLDN 240

Query: 241 M 242
           M
Sbjct: 241 M 241

[Close]

BLAST of Carg10922 vs. ExPASy TrEMBL
Match: A0A6J1KGL3 (transcription factor MYB82 OS=Cucurbita maxima OX=3661 GN=LOC111493699 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.0e-131
Identity = 235/241 (97.51%), Postives = 236/241 (97.93%), Query Frame = 0


Query: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180
           KANDSNSH KND+DNDDDVNNKKQKKVINQT YPQPPICIDNGINLAHDTQRRNQEENRE
Sbjct: 121 KANDSNSHMKNDDDNDDDVNNKKQKKVINQTCYPQPPICIDNGINLAHDTQRRNQEENRE 180

Query: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240
           VTEPWNMDDITSSHYNINSPIV ANDATFNFDDE YFDHLDP FLLEAFGCSSVHASLDN
Sbjct: 181 VTEPWNMDDITSSHYNINSPIVHANDATFNFDDEPYFDHLDPLFLLEAFGCSSVHASLDN 240

Query: 241 M 242
           M
Sbjct: 241 M 241

[Close]

BLAST of Carg10922 vs. ExPASy TrEMBL
Match: A0A5D3BGT2 (Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00730 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 211/241 (87.55%), Postives = 220/241 (91.29%), Query Frame = 0


Query: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESK MKQQ KKNLWKPEED ILR+YVETHGEGNWATVSQESGLMRG KSCRLRWKNYL
Sbjct: 1   MEESKAMKQQPKKNLWKPEEDFILRSYVETHGEGNWATVSQESGLMRGAKSCRLRWKNYL 60

Query: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRG MSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180
           KAN+SNS KKND++N DD NNKKQKKVINQT YPQPP+  DNG +LAHD QRRNQEENRE
Sbjct: 121 KANNSNSCKKNDDNNSDDGNNKKQKKVINQTCYPQPPLYRDNGADLAHDIQRRNQEENRE 180

Query: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240
              P NMDDITSSHYNINSP++PAN+ TFNFDDE YFDHLDPFFL EAFGCSSV ASLDN
Sbjct: 181 KQNPSNMDDITSSHYNINSPMIPANNTTFNFDDEPYFDHLDPFFLFEAFGCSSVDASLDN 240

Query: 241 M 242
           M
Sbjct: 241 M 241

[Close]

BLAST of Carg10922 vs. ExPASy TrEMBL
Match: A0A1S3C427 (transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103496778 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.3e-115
Identity = 211/241 (87.55%), Postives = 220/241 (91.29%), Query Frame = 0


Query: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESK MKQQ KKNLWKPEED ILR+YVETHGEGNWATVSQESGLMRG KSCRLRWKNYL
Sbjct: 1   MEESKAMKQQPKKNLWKPEEDFILRSYVETHGEGNWATVSQESGLMRGAKSCRLRWKNYL 60

Query: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRG MSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180
           KAN+SNS KKND++N DD NNKKQKKVINQT YPQPP+  DNG +LAHD QRRNQEENRE
Sbjct: 121 KANNSNSCKKNDDNNSDDGNNKKQKKVINQTCYPQPPLYRDNGADLAHDIQRRNQEENRE 180

Query: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240
              P NMDDITSSHYNINSP++PAN+ TFNFDDE YFDHLDPFFL EAFGCSSV ASLDN
Sbjct: 181 KQNPSNMDDITSSHYNINSPMIPANNTTFNFDDEPYFDHLDPFFLFEAFGCSSVDASLDN 240

Query: 241 M 242
           M
Sbjct: 241 M 241

[Close]

BLAST of Carg10922 vs. ExPASy TrEMBL
Match: A0A6J1FGK0 (transcription factor WER-like OS=Cucurbita moschata OX=3662 GN=LOC111443992 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 2.5e-114
Identity = 209/241 (86.72%), Postives = 220/241 (91.29%), Query Frame = 0


Query: 1   MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60
           MEESK MKQQ KKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL
Sbjct: 1   MEESKAMKQQAKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYL 60

Query: 61  RPNIKRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120
           RPNIKRG MSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR
Sbjct: 61  RPNIKRGGMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKR 120

Query: 121 KANDSNSHKKNDNDNDDDVNNKKQKKVINQTGYPQPPICIDNGINLAHDTQRRNQEENRE 180
           K N+S+S KK D   +DD NNKKQKKVINQT YPQP +C DN  N AHD QRRNQEENRE
Sbjct: 121 KVNESSSCKKKD---EDDGNNKKQKKVINQTSYPQPQMCSDNWANQAHDIQRRNQEENRE 180

Query: 181 VTEPWNMDDITSSHYNINSPIVPANDATFNFDDEHYFDHLDPFFLLEAFGCSSVHASLDN 240
           VT+ WNMDDITSSHYNIN P+VPAN+ATFNFDDE +F+HLDPFFL+EAFGCSSV ASL+N
Sbjct: 181 VTDLWNMDDITSSHYNINCPMVPANNATFNFDDEPHFNHLDPFFLIEAFGCSSVDASLEN 238

Query: 241 M 242
           M
Sbjct: 241 M 238

[Close]

BLAST of Carg10922 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 )

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-50
Identity = 92/121 (76.03%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 5   KEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNI 64
           +E K  +K+ LWKPEED+IL++YVETHGEGNWA +S+ SGL RGGKSCRLRWKNYLRPNI
Sbjct: 6   EEGKSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNI 65

Query: 65  KRGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKAND 124
           KRG MS +E+DLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNK     ++ A +
Sbjct: 66  KRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQNAPE 125

Query: 125 S 126
           S
Sbjct: 126 S 126

[Close]

BLAST of Carg10922 vs. TAIR 10
Match: AT5G40330.1 (myb domain protein 23 )

HSP 1 Score: 159.5 bits (402), Expect = 3.5e-39
Identity = 74/116 (63.79%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 8   KQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           + + KK LW  EED IL +YV THG+G+W  +++++GL R GKSCRLRW NYL PN+ RG
Sbjct: 9   EHEYKKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRG 68

Query: 68  EMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKN-GLQDKRKA 123
             + +EEDLIIR+HKLLGNRWSLIA R+PGRTDN+VKNYWNTHL+K  GL D   A
Sbjct: 69  NFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGLGDHSTA 124

[Close]

BLAST of Carg10922 vs. TAIR 10
Match: AT5G35550.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-38
Identity = 74/128 (57.81%), Postives = 96/128 (75.00%), Query Frame = 0


Query: 8   KQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           +++L +  W   ED ILR+Y+ THGEG W+T+  ++GL R GKSCRLRWKNYLRP IKRG
Sbjct: 11  REELNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRG 70

Query: 68  EMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKANDSNS 127
            +S +EE+LIIR+H LLGNRWSLIAGRLPGRTDNE+KN+WN++L K   + + K      
Sbjct: 71  NISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPKTQTKQPKRIK 130

Query: 128 HKKNDNDN 136
           H  N+ +N
Sbjct: 131 HSTNNENN 138

[Close]

BLAST of Carg10922 vs. TAIR 10
Match: AT3G13540.1 (myb domain protein 5 )

HSP 1 Score: 155.2 bits (391), Expect = 6.6e-38
Identity = 79/151 (52.32%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 8   KQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIKRG 67
           K  +K+  W  EED IL ++++  GEG W ++ + +GL+R GKSCRLRW NYLRP++KRG
Sbjct: 20  KMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRG 79

Query: 68  EMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQDKRKANDSNS 127
            ++ +EEDLI+R+H+LLGNRWSLIAGR+PGRTDNE+KNYWNTHL K  L   R+  D  +
Sbjct: 80  GITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLL---RQGIDPQT 139

Query: 128 HKKNDNDNDDDVNNKKQKKVINQTGYPQPPI 159
           HK  D +N     +K +++V     YP  PI
Sbjct: 140 HKPLDANN----IHKPEEEVSGGQKYPLEPI 163

[Close]

BLAST of Carg10922 vs. TAIR 10
Match: AT4G05100.1 (myb domain protein 74 )

HSP 1 Score: 153.3 bits (386), Expect = 2.5e-37
Identity = 69/112 (61.61%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 6   EMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGLMRGGKSCRLRWKNYLRPNIK 65
           E K  LKK  W PEED  L +Y+  HG GNW T+ + +GL R GKSCRLRW NYLRP+IK
Sbjct: 8   EKKNGLKKGPWTPEEDQKLIDYINIHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIK 67

Query: 66  RGEMSKEEEDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKNGLQ 118
           RG  S EEE+ II++H ++GN+WS IA RLPGRTDNE+KNYWNTH+ K  L+
Sbjct: 68  RGRFSFEEEETIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLK 119

The following BLAST results are available for this feature:

BLAST of Carg10922 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030370.1	1.3e-136	100.00	Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6599384.1	1.3e-136	100.00	Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946431.1	3.5e-134	98.76	transcription factor MYB82 [Cucurbita moschata]	[more]
XP_023545990.1	1.1e-132	97.93	transcription factor MYB82 [Cucurbita pepo subsp. pepo]	[more]
XP_022999279.1	2.1e-131	97.51	transcription factor MYB82 [Cucurbita maxima]	[more]

BLAST of Carg10922 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTF7	2.1e-49	76.03	Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1	[more]
Q96276	4.9e-38	63.79	Transcription factor MYB23 OS=Arabidopsis thaliana OX=3702 GN=MYB23 PE=1 SV=1	[more]
Q9FJA2	1.4e-37	57.81	Transcription factor TT2 OS=Arabidopsis thaliana OX=3702 GN=TT2 PE=1 SV=1	[more]
A0A4D6Q411	4.1e-37	65.09	Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB1 PE=2 ...	[more]
Q38850	9.2e-37	52.32	Transcription repressor MYB5 OS=Arabidopsis thaliana OX=3702 GN=MYB5 PE=1 SV=1	[more]

BLAST of Carg10922 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3P0	1.7e-134	98.76	transcription factor MYB82 OS=Cucurbita moschata OX=3662 GN=LOC111450489 PE=4 SV...	[more]
A0A6J1KGL3	1.0e-131	97.51	transcription factor MYB82 OS=Cucurbita maxima OX=3661 GN=LOC111493699 PE=4 SV=1	[more]
A0A5D3BGT2	2.3e-115	87.55	Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3C427	2.3e-115	87.55	transcription factor WER-like OS=Cucumis melo OX=3656 GN=LOC103496778 PE=4 SV=1	[more]
A0A6J1FGK0	2.5e-114	86.72	transcription factor WER-like OS=Cucurbita moschata OX=3662 GN=LOC111443992 PE=4...	[more]

BLAST of Carg10922 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52600.1	1.5e-50	76.03	myb domain protein 82	[more]
AT5G40330.1	3.5e-39	63.79	myb domain protein 23	[more]
AT5G35550.1	1.0e-38	57.81	Duplicated homeodomain-like superfamily protein	[more]
AT3G13540.1	6.6e-38	52.32	myb domain protein 5	[more]
AT4G05100.1	2.5e-37	61.61	myb domain protein 74	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 65..113 e-value: 3.1E-17 score: 73.2 coord: 12..62 e-value: 5.3E-12 score: 55.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 8..60 score: 10.51063
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 61..111 score: 10.661592
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..60 e-value: 7.52418E-10 score: 51.037
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 68..111 e-value: 2.99991E-12 score: 57.5854
None	No IPR available	GENE3D	1.10.10.60		coord: 4..66 e-value: 2.5E-17 score: 64.4
None	No IPR available	GENE3D	1.10.10.60		coord: 68..134 e-value: 1.1E-20 score: 75.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..141
None	No IPR available	PANTHER	PTHR47999	TRANSCRIPTION FACTOR MYB8-RELATED-RELATED	coord: 4..228
None	No IPR available	PANTHER	PTHR47999:SF21	TUBER-SPECIFIC AND SUCROSE-RESPONSIVE ELEMENT BINDING FACTOR	coord: 4..228
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 66..111 e-value: 1.3E-14 score: 54.1 coord: 14..60 e-value: 6.9E-13 score: 48.6
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 8..60 score: 17.274033
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 61..115 score: 24.668684
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10922-RA	Carg10922-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity