Carg10913 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10913
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	methyl-CpG-binding domain-containing protein 11-like
Location	Carg_Chr05: 11382754 .. 11387448 (-)
RNA-Seq Expression	Carg10913
Synteny	Carg10913

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAGAGAGAGAAAGAAGCATTGACAAACTATTAGCCGTAAATCTATTTCCTTCGGCTGTTTGTGTTATGTTCAACAGAAGCTGAGAAAGAACCCAGAAACCCAGGTAAGCCACTCTCCTCTCTAACCTTTTTTCTTCCTTTTTCTTTCAGTAATTTCTTGTTCTGATCTATTTTTAGTGAAATTCTTCATCATTGCTCCTTCTCTGTAGGTGAAAAATGGCGGCATCAGTGGAGAAAGACACTGTGAATGAGGAGGTCGTGTCCGTCGAACTCCCTGCTCCTCCTGGCTGGAAGAAAAAGGTAACCGATTCCTTTTTTCTGGAGCTTCAATTTTTGTTTCAATCTGTTTTTGTTACTCAATTTTGCTCTGAATTACGAATTATCGACTGGGATTCTGTTGTCCCCTGATTTTAGGGTTTCTTTGGTGGTAGTTCACTGATTTCGTAACTAGGGCTTTTTTGGACGGTTGAATTATCAAATTTCTTGCTTAATTCCCCTTTTGGAGAATTATTTGCAAACTGTTGGTCTCTGGTGTTCATTTAACTTCGTTTTTTGAATTTTGGATATCGTGATTTCGTTGTGCTTGTATACCTGAATCCTGGACTAGTTTTCGTTCCCTTCAGCGATAATGCTTTGTAAAGTTCTTTGCATTATCTGGTGAGTATCAGGGCTGCCACTGCTTAGGCATCTGAGGGGTGGGATCTTGTATATCATATGGGTCATTTCCTTGCTCATATTGATAATTTCTTTTTCTAATTTTTATGGATTCCCCCCGCCCCACAAGTGTATATTTATGTGTGCATATTTCGTATCTAATCAGTTGCTGATATTGTGGATCGAATACCAGCCACAAATCCATTTGATAGGATTCCCACCCCCCCAAATTTAAATTATCTCTTCAGTTGACTATTAGTGATCTAACTGACTACCCTTCCATAAGATCCTTCCATTTAGCAGCACCTTAGGTTGACATAGCCTTAAAGTTAAGAGCGAGGTTGAAACAAAGAAAGGCTTACGGTGGATACATAGGCACCTAGAGACGAGGGAGGGCGTAGTAAGCGACAAAATGTTTCGGAGAGTTGAAAATAAGCGTAGATCTGGAGATTACCGAATAGGTCAAAGAGTTCCTAAGATAGAATGTAAGCCAAAACTCTCACAGCAATTTTACACATGATTTGAGTAAGAAGTGGATTAATTATCTCGGATGCTACATATTAGCCTCTTGGGGGTTGCGTATTGCCTTGTATGTGTAGATTTGAAGTTGGATTTTATTTTCAGAATTGGAATAAATTGGATATGTTCAAGGGAATGTCTGAGTATAATATTGAGATGTTGGATGTCTATAGTTGTTTCTGTATATCTCTTTTCTTGCTATTACCAAACTCAATTGTTTGGCATATAGATGAAATTGCTTCTCTTTTGGGCAGCTCCAGATGTTGGTTTCTATTATGGAAGGAAGTAGTATTTGAGAGGGATTATGGATTAAAGACGAGAAAAAGGGGAAGAGTGAGATTTTAGGAGGATGTTTGTTTTGAGGAAGGAAGTTTGAACATTAATATGGCAAATTTATCAGGGAGATGTGGAATGTTCAACACTTTGGTCGGATGTGATAAGCCCTAATACATTTCATTTATTGCTCACTAATTAGTTTTGTTAGTTGGTACATTTGTTCTGTAGTATCGGTGACTAAACAAGATTCCATTGCTTTATAAGTAGTTAGAACTCTATATTTTCTGATAGTCCGTATAGATAATTTCCTGTCATTTTGATCAGTATCATCCAAATAACTGTGAGATCCCACATCGGTCGGTGAGGAGAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTAACATATGCGTTTTAAAATCGTGAGGCTGACGACAATACGTAACGGGCCAAAGTGGATAATATCTGCTAGCGATGGACTTGGGCTATTACAAATGGTATCAGAGCCAGACACCAAGCGGTGTGCCAGCGAGGACGCTGGGCTCCCAAGGGGGGTGGATTGTGAGATCCCACATCGGTTAGAAAAGAGAACAAAGCATTTCTTATAAGAGTGTGGAAAAACCTTTCCCTAACAAACATGTTTTAAAATCATGAGTTTGACGGCGATACGTAACGGGCTTAGTGAACAATATCTGCTAGAGGCTTGGGCTGTTACAATAACAAATTATCTATGTGATCAATTAAATTTCGTACTTCTGGAAAGACTTTTAACACTTGTGGAAAAAAGAGGAAGACATTGGCAAGGTGACGGGAGTGAATTTCAGCAACGGGATTTGGAAGTATGTTATAGATGGTGGCCAGTTTGAGTGTGTTACTACATGGAGAGTTGTGGTAGGAGGTAGGGTCAACGATCTTTGGACCAGCCTTCTCTTTTGTACTCTTACCTTACATTTTCTTCTAGAAACAATAAATGCCTTTATCATGATGGTTCCAGACTAGTTCAAAATTGAAATCAAATTCAAACATGAAATCTTGACTAGATGCAATGGAGAAAATGGTGAACCGAGGGCCGAAATCACCAGAGCTAGAGATGATGCGGGTTTAAAGGAAATTTCATGATCAGTGAAGTATAGAGATTATGATGTACTTATGGGAACTCTTTTTAAGGGGAAAAAAAAAAAGAGGAATGCTCGAGCACCGATGGAAAGAGAAACACCCACCGAGAGTCGATGGGGGTATAATTTCCTAGGATGAATGATGGGTCAATTGGAATAGTCCGAAAGAGTCAAATGGGATCAATACGAAAAGCTTGAATTCATGAGTTGGTGGAATACATATTTAATATAATAGATCATGACGGTTGGTTACTTTGAGTTGAATGATACTTGTCGAATGACTTGATGAAGAAGAAGTTGGAACTTGGAAAGGTAAGAGTTATGTGTGGAAGGTGATGCAGTTGCTTGATATGGTGTCAAGAATGCCTATGCAGAATCCGAAATGGGTTTAATCACCAAAGGTTGGTTGTAGCTATCAATCTGTTTTGGTCTGATGAAAGGTAACTCTTGCCGGAAGCTAATCCGAGAGAGAACACCTTTAGTGTTGGATCTTTCTTCACAACTGGCTACCAATTAGGAACAAGAGTCTTGGTTCGGGGTGTGAACAAAAGCATATATTAAATGAGGTGATTTCCTTCCCTTACCCTTCGAAAAATCCTTATGCCCTTATCTACATCTCCAACTTCAAAAAGCTAGCAGCAAGATATACTAAAATCCAATACAAGATCCCACATCAGTTGGAGAGGAGAACGAACCATTCCTTATAAGGGTGTGGAAACCTCTCTCTAACAGACGTGTTTTAAAACCGTGAGGCTGACGGTGATACGTAACGGGCCAAAGCGGATAATATCTGCTAGCTGTGGGCTAGGATGTTATAAATGGTATCAGAGGCAAACACCGAGTGGTGTGCCAGTGAGGATGTTGAGCTCCCAATGGGGGTGGATTCTGAAATCCCACATCAGTTGGAGAGGAGAACGAAACATTCCTTATAAAGGTGTGAACATTTAATTTATTGACGGTCCTTCGCTCACTCTTTCAATGGAGAACTTATAAATCTATATTATCAAGTACTAACCTACCTATGAGGTCCACCTTAACCATTATATTTACACAATTATTTAACTTCTAATATCTTATATTGATAACAATATATTTGTGTGTGTATGTATGTATGGGTTGCTGGTTTATTGGTTGCAACTGATTGAACGGTATGAATATTTGGCAGTTCTTCCCTAAGCAAGGTAATTCCCCTAAGAAATATGAGGTCATCTTCATAACTCCGACAGGCGAGGAGTTCAGCAACAAAAGAAAGTTGGATCAGTACCTGAAGTCACACCCTGGTGGCCCAGCATCAGCTGAATTTGATTGGGGCACGGGTGAGACGCCGAGGAGGTCAGCAAGGATAAGTGAAAAGGCTAAAGTGATTTCACCAATGGAGAGTGAGCACCCAAAGAGAAAAAGAACTTCGGTGTCCAAGAAAGGTCTTAAAGAAATAGAAACTGAACCAGCAGAAGTTCTGGAGGAGAAGAAAGAAGTTGACAACCAAGATGCTGGAAAAGATGAGAGCATAGCTGATGCTGAGGTAAAGGATGATGATAAGAACGAAACAAAAGATGAAGCTGCCGAAGCAGATCCACCAAAGCCCGACGACCAGTTGAATGCAGATAATGATGCTGATATAAAGGATGCTGATAAGAAGGAAAACCAAGACGAGAAGGAAACGAAAGATGAAGCTGCCGAAGCAGAGCCACCGAAACCTGATGACCAGTTGAATGCAGATAATGATGCTGAAAAACAAGAACATAAGATAACTAGTGAATCCGAACAAGAAAAATTGGAAAGAAACCTCAATGAGAAGGAACCCGAAAGCTCGAAACTAAACCTCAATGAGAATCTGGAAGGAGCAAAGCATGACGAAAAGATCGAGCAACCACAAGTTGAGGAGAAGAATGATAGTACTTTGGGGTGAAACTGTCAAACCTGACACTCTTCTATCTGATAGACAAGAAAAGGAACAAGAGAATCAAAAACCTTATGAACAGGATATTGAACTAGAAGGAGAAATCAAGGACAAAGCAGCTGCAACTGAAGAGAAGAATGAGAAACATACTGAGACAAACAAGAGCATAGAAGCCACTGAAAATGGTAGCCACAGGAATGATGCTGGTGAGGTAAAGCCTTGA

mRNA sequence

GAGAGAGAGAGAGAAAGAAGCATTGACAAACTATTAGCCGTAAATCTATTTCCTTCGGCTGTTTGTGTTATGTTCAACAGAAGCTGAGAAAGAACCCAGAAACCCAGGTGAAAAATGGCGGCATCAGTGGAGAAAGACACTGTGAATGAGGAGGTCGTGTCCGTCGAACTCCCTGCTCCTCCTGGCTGGAAGAAAAAGTTCTTCCCTAAGCAAGGTAATTCCCCTAAGAAATATGAGGTCATCTTCATAACTCCGACAGGCGAGGAGTTCAGCAACAAAAGAAAGTTGGATCAGTACCTGAAGTCACACCCTGGTGGCCCAGCATCAGCTGAATTTGATTGGGGCACGGGTGAGACGCCGAGGAGGTCAGCAAGGATAAGTGAAAAGGCTAAAGTGATTTCACCAATGGAGAGTGAGCACCCAAAGAGAAAAAGAACTTCGGTGTCCAAGAAAGGTCTTAAAGAAATAGAAACTGAACCAGCAGAAGTTCTGGAGGAGAAGAAAGAAGTTGACAACCAAGATGCTGGAAAAGATGAGAGCATAGCTGATGCTGAGGTAAAGGATGATGATAAGAACGAAACAAAAGATGAAGCTGCCGAAGCAGATCCACCAAAGCCCGACGACCAGTTGAATGCAGATAATGATGCTGATATAAAGGATGCTGATAAGAAGGAAAACCAAGACGAGAAGGAAACGAAAGATGAAGCTGCCGAAGCAGAGCCACCGAAACCTGATGACCAGTTGAATGCAGATAATGATGCTGAAAAACAAGAACATAAGATAACTAGTGAATCCGAACAAGAAAAATTGGAAAGAAACCTCAATGAGAAGGAACCCGAAAGCTCGAAACTAAACCTCAATGAGAATCTGGAAGGAGCAAAGCATGACGAAAAGATCGAGCAACCACAAGATATTGAACTAGAAGGAGAAATCAAGGACAAAGCAGCTGCAACTGAAGAGAAGAATGAGAAACATACTGAGACAAACAAGAGCATAGAAGCCACTGAAAATGGTAGCCACAGGAATGATGCTGGTGAGGTAAAGCCTTGA

Coding sequence (CDS)

ATGGCGGCATCAGTGGAGAAAGACACTGTGAATGAGGAGGTCGTGTCCGTCGAACTCCCTGCTCCTCCTGGCTGGAAGAAAAAGTTCTTCCCTAAGCAAGGTAATTCCCCTAAGAAATATGAGGTCATCTTCATAACTCCGACAGGCGAGGAGTTCAGCAACAAAAGAAAGTTGGATCAGTACCTGAAGTCACACCCTGGTGGCCCAGCATCAGCTGAATTTGATTGGGGCACGGGTGAGACGCCGAGGAGGTCAGCAAGGATAAGTGAAAAGGCTAAAGTGATTTCACCAATGGAGAGTGAGCACCCAAAGAGAAAAAGAACTTCGGTGTCCAAGAAAGGTCTTAAAGAAATAGAAACTGAACCAGCAGAAGTTCTGGAGGAGAAGAAAGAAGTTGACAACCAAGATGCTGGAAAAGATGAGAGCATAGCTGATGCTGAGGTAAAGGATGATGATAAGAACGAAACAAAAGATGAAGCTGCCGAAGCAGATCCACCAAAGCCCGACGACCAGTTGAATGCAGATAATGATGCTGATATAAAGGATGCTGATAAGAAGGAAAACCAAGACGAGAAGGAAACGAAAGATGAAGCTGCCGAAGCAGAGCCACCGAAACCTGATGACCAGTTGAATGCAGATAATGATGCTGAAAAACAAGAACATAAGATAACTAGTGAATCCGAACAAGAAAAATTGGAAAGAAACCTCAATGAGAAGGAACCCGAAAGCTCGAAACTAAACCTCAATGAGAATCTGGAAGGAGCAAAGCATGACGAAAAGATCGAGCAACCACAAGATATTGAACTAGAAGGAGAAATCAAGGACAAAGCAGCTGCAACTGAAGAGAAGAATGAGAAACATACTGAGACAAACAAGAGCATAGAAGCCACTGAAAATGGTAGCCACAGGAATGATGCTGGTGAGGTAAAGCCTTGA

Protein sequence

MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIETEPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESSKLNLNENLEGAKHDEKIEQPQDIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP

Homology

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BLAST of Carg10913 vs. NCBI nr
Match: KAG7030379.1 (Methyl-CpG-binding domain-containing protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 568.2 bits (1463), Expect = 4.5e-158
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60
           MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ
Sbjct: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60

Query: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120
           YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET
Sbjct: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120

Query: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180
           EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI
Sbjct: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180

Query: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240
           KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE
Sbjct: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240

Query: 241 PESSKLNLNENLEGAKHDEKIEQPQDIELEGEIKDKAAATEEKNEKHTETNKSIEATENG 300
           PESSKLNLNENLEGAKHDEKIEQPQDIELEGEIKDKAAATEEKNEKHTETNKSIEATENG
Sbjct: 241 PESSKLNLNENLEGAKHDEKIEQPQDIELEGEIKDKAAATEEKNEKHTETNKSIEATENG 300

Query: 301 SHRNDAGEVKP 312
           SHRNDAGEVKP
Sbjct: 301 SHRNDAGEVKP 311

[Close]

BLAST of Carg10913 vs. NCBI nr
Match: XP_023545855.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548.9 bits (1413), Expect = 2.8e-152
Identity = 310/346 (89.60%), Postives = 311/346 (89.88%), Query Frame = 0


Query: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60
           MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ
Sbjct: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60

Query: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120
           YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET
Sbjct: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120

Query: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180
           EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI
Sbjct: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180

Query: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240
           KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE
Sbjct: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240

Query: 241 PESSKLNLNENLEGAKHDEKIEQP-----------------------------------Q 300
           PESSKLNLNENLEGAKHDE+IEQP                                   Q
Sbjct: 241 PESSKLNLNENLEGAKHDEQIEQPQVEEKNDSNLGETVKPDTLLSDRQEKEQENQKPYEQ 300

Query: 301 DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 312
           DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP
Sbjct: 301 DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 346

[Close]

BLAST of Carg10913 vs. NCBI nr
Match: XP_022946072.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 546.6 bits (1407), Expect = 1.4e-151
Identity = 308/346 (89.02%), Postives = 310/346 (89.60%), Query Frame = 0


Query: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60
           MAASVEKDTVNEE+VSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ
Sbjct: 1   MAASVEKDTVNEEIVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60

Query: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120
           YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET
Sbjct: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120

Query: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180
           EPAEV EEKKEVDNQDAGKDE+IADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI
Sbjct: 121 EPAEVREEKKEVDNQDAGKDETIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180

Query: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240
           KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE
Sbjct: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240

Query: 241 PESSKLNLNENLEGAKHDEKIEQP-----------------------------------Q 300
           PESSKLNLNENLEGAKHDEKIEQP                                   Q
Sbjct: 241 PESSKLNLNENLEGAKHDEKIEQPQVEEKNDSTLGETVKPDTLLSDRQEKEQENQKPCEQ 300

Query: 301 DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 312
           DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP
Sbjct: 301 DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 346

[Close]

BLAST of Carg10913 vs. NCBI nr
Match: KAG6599394.1 (Methyl-CpG-binding domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 546.2 bits (1406), Expect = 1.8e-151
Identity = 309/346 (89.31%), Postives = 310/346 (89.60%), Query Frame = 0


Query: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60
           MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ
Sbjct: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60

Query: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120
           YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET
Sbjct: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120

Query: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180
           EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI
Sbjct: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180

Query: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240
           KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE
Sbjct: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240

Query: 241 PESSKLNLNENLEGAKHDEKIEQP-----------------------------------Q 300
           P+SSKLNLNENLEGAKHDEKIEQP                                   Q
Sbjct: 241 PKSSKLNLNENLEGAKHDEKIEQPQVEEKNDSTLGETVKPDTLLSDRQEKEQENQKPYEQ 300

Query: 301 DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 312
            IELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP
Sbjct: 301 GIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 346

[Close]

BLAST of Carg10913 vs. NCBI nr
Match: XP_022999167.1 (methyl-CpG-binding domain-containing protein 11-like [Cucurbita maxima])

HSP 1 Score: 537.7 bits (1384), Expect = 6.5e-149
Identity = 305/346 (88.15%), Postives = 308/346 (89.02%), Query Frame = 0


Query: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60
           MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ
Sbjct: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60

Query: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120
           YLKSHPG PASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET
Sbjct: 61  YLKSHPGCPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120

Query: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180
           EPAEVLEEKKEVDNQDAGK ESIADAEVKDDDKN+T+DEAAEADPPKPDDQLNADNDADI
Sbjct: 121 EPAEVLEEKKEVDNQDAGKHESIADAEVKDDDKNKTEDEAAEADPPKPDDQLNADNDADI 180

Query: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240
           KDADKKENQD+KETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE
Sbjct: 181 KDADKKENQDKKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240

Query: 241 PESSKLNLNENLEGAKHDEKIEQP-----------------------------------Q 300
           PESSKLNLNENLEGAKHDEKIEQP                                   Q
Sbjct: 241 PESSKLNLNENLEGAKHDEKIEQPQVEEKNDSNLGETVKPDTLLSDRQEKEQENQKPYEQ 300

Query: 301 DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 312
           DIELEGEI DKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP
Sbjct: 301 DIELEGEINDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 346

[Close]

BLAST of Carg10913 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-29
Identity = 109/306 (35.62%), Postives = 171/306 (55.88%), Query Frame = 0


Query: 12  EEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPAS 71
           +E+VS+ELPAP  WKK F+PK+  +P+K E++F+ PTGEE S++++L+QYLK+HPG P  
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 72  AEFDWGTGETPRRSARISEKAKVISPMESEHP--KRKRTSVSKKGLKEIETEPAEVLEEK 131
           +EF+W TGETPRRS+RIS+K K  +P   + P  K++R+S++KK  K    E AE  EE 
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSSLTKKDNK----EAAEKNEEA 124

Query: 132 KEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQ 191
              +N D  KD    +AE + + + E   E AEA+          +N+ +  +A+K   +
Sbjct: 125 AVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAE--------KENNEGEKTEAEKVNKE 184

Query: 192 DE-----KETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESS 251
            E     KE + E AEAE  K  ++  A+N   K+   +  + E  +++ +  EK+  S 
Sbjct: 185 GEKTEAGKEGQTEIAEAEKEKEGEKAEAEN---KEAEVVRDKKESMEVDTSELEKKAGSG 244

Query: 252 KLNLNENLEGAKHDEKIEQPQDIELE--GEIKDKAAATEEKNEKHTETNKSIEATENGSH 309
                   EGA+   K+E  +D E++   E+  +A   ++  E+ TE   S+    NG  
Sbjct: 245 --------EGAEEPSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQ 287

[Close]

BLAST of Carg10913 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.4e-23
Identity = 102/273 (37.36%), Postives = 135/273 (49.45%), Query Frame = 0


Query: 12  EEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPAS 71
           EEVVSVELPAP  WKK F+P +  S KK EV+F+ PTGEE SN+++L+QYLKSHPG PA 
Sbjct: 5   EEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAI 64

Query: 72  AEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIETEPAE-VLEEKK 131
           AEFDW T  TPRRSARISEK K     + E PK++  + S    K+ E E +E   EE  
Sbjct: 65  AEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENS 124

Query: 132 EVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQD 191
            V + +    E IA+ E   D     + E                        D KEN  
Sbjct: 125 HVKDTEMNPPEGIAENENVTDKNGSGETERVN---------------------DAKENIV 184

Query: 192 EKETKDEAAEAEPPK--PDDQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESSKLNL 251
            +ET + A   E  +   +  L++ +D  K+  K       EK   ++ +K  E+S    
Sbjct: 185 AEETPNAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKK 244

Query: 252 NENLEGAKHDEKIEQPQDIELEGEIKDKAAATE 282
           N   E   H+E       +  E E K+K A  E
Sbjct: 245 NSEAETRNHEE-----NGLTTEAEGKEKTAEGE 251

[Close]

BLAST of Carg10913 vs. ExPASy TrEMBL
Match: A0A6J1G2N9 (methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111450270 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 6.8e-152
Identity = 308/346 (89.02%), Postives = 310/346 (89.60%), Query Frame = 0


Query: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60
           MAASVEKDTVNEE+VSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ
Sbjct: 1   MAASVEKDTVNEEIVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60

Query: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120
           YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET
Sbjct: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120

Query: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180
           EPAEV EEKKEVDNQDAGKDE+IADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI
Sbjct: 121 EPAEVREEKKEVDNQDAGKDETIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180

Query: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240
           KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE
Sbjct: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240

Query: 241 PESSKLNLNENLEGAKHDEKIEQP-----------------------------------Q 300
           PESSKLNLNENLEGAKHDEKIEQP                                   Q
Sbjct: 241 PESSKLNLNENLEGAKHDEKIEQPQVEEKNDSTLGETVKPDTLLSDRQEKEQENQKPCEQ 300

Query: 301 DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 312
           DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP
Sbjct: 301 DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 346

[Close]

BLAST of Carg10913 vs. ExPASy TrEMBL
Match: A0A6J1KA38 (methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111493630 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.1e-149
Identity = 305/346 (88.15%), Postives = 308/346 (89.02%), Query Frame = 0


Query: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60
           MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ
Sbjct: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60

Query: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120
           YLKSHPG PASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET
Sbjct: 61  YLKSHPGCPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120

Query: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180
           EPAEVLEEKKEVDNQDAGK ESIADAEVKDDDKN+T+DEAAEADPPKPDDQLNADNDADI
Sbjct: 121 EPAEVLEEKKEVDNQDAGKHESIADAEVKDDDKNKTEDEAAEADPPKPDDQLNADNDADI 180

Query: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240
           KDADKKENQD+KETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE
Sbjct: 181 KDADKKENQDKKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240

Query: 241 PESSKLNLNENLEGAKHDEKIEQP-----------------------------------Q 300
           PESSKLNLNENLEGAKHDEKIEQP                                   Q
Sbjct: 241 PESSKLNLNENLEGAKHDEKIEQPQVEEKNDSNLGETVKPDTLLSDRQEKEQENQKPYEQ 300

Query: 301 DIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 312
           DIELEGEI DKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP
Sbjct: 301 DIELEGEINDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 346

[Close]

BLAST of Carg10913 vs. ExPASy TrEMBL
Match: A0A5D3BH67 (Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00350 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.4e-112
Identity = 246/345 (71.30%), Postives = 261/345 (75.65%), Query Frame = 0


Query: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60
           MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSP+K+EVIF TPTGEE +NKRKLDQ
Sbjct: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQ 60

Query: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120
           YLK+HPGGPA+AEFDWGTGETPRRSARISEKAK   PMESEHPKRKRTSVSKK LKE E 
Sbjct: 61  YLKAHPGGPAAAEFDWGTGETPRRSARISEKAKASPPMESEHPKRKRTSVSKKDLKETEA 120

Query: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180
           EP EVLEEKKEVDN DAGKDES+ADAEV                                
Sbjct: 121 EP-EVLEEKKEVDNPDAGKDESMADAEV-------------------------------- 180

Query: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240
           KDA+KKEN DEKETK+EAAEAEPPKPDDQLNADN+AEKQEHKIT+ES QEKLE NLNEKE
Sbjct: 181 KDANKKENIDEKETKNEAAEAEPPKPDDQLNADNEAEKQEHKITNESNQEKLEGNLNEKE 240

Query: 241 PESSKLNLNENLEGAKHDEKIEQP----------------------------------QD 300
           PESSKLNLNENLEGAKH+EKIEQP                                  Q+
Sbjct: 241 PESSKLNLNENLEGAKHEEKIEQPQVEKNDGNFAEAVKPDTLVSDKQENALENQNPNQQE 300

Query: 301 IELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 312
           IELEGEIKDKA A EEK+EKHTETNK+IE TENG+HRN  GEVKP
Sbjct: 301 IELEGEIKDKAGAAEEKSEKHTETNKTIEVTENGNHRNGTGEVKP 312

[Close]

BLAST of Carg10913 vs. ExPASy TrEMBL
Match: A0A1S3C687 (methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=LOC103497143 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.4e-112
Identity = 246/345 (71.30%), Postives = 261/345 (75.65%), Query Frame = 0


Query: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60
           MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSP+K+EVIF TPTGEE +NKRKLDQ
Sbjct: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPRKHEVIFTTPTGEEINNKRKLDQ 60

Query: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120
           YLK+HPGGPA+AEFDWGTGETPRRSARISEKAK   PMESEHPKRKRTSVSKK LKE E 
Sbjct: 61  YLKAHPGGPAAAEFDWGTGETPRRSARISEKAKASPPMESEHPKRKRTSVSKKDLKETEA 120

Query: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180
           EP EVLEEKKEVDN DAGKDES+ADAEV                                
Sbjct: 121 EP-EVLEEKKEVDNPDAGKDESMADAEV-------------------------------- 180

Query: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240
           KDA+KKEN DEKETK+EAAEAEPPKPDDQLNADN+AEKQEHKIT+ES QEKLE NLNEKE
Sbjct: 181 KDANKKENIDEKETKNEAAEAEPPKPDDQLNADNEAEKQEHKITNESNQEKLEGNLNEKE 240

Query: 241 PESSKLNLNENLEGAKHDEKIEQP----------------------------------QD 300
           PESSKLNLNENLEGAKH+EKIEQP                                  Q+
Sbjct: 241 PESSKLNLNENLEGAKHEEKIEQPQVEKNDGNFAEAVKPDTLVSDKQENALENQNPNQQE 300

Query: 301 IELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 312
           IELEGEIKDKA A EEK+EKHTETNK+IE TENG+HRN  GEVKP
Sbjct: 301 IELEGEIKDKAGAAEEKSEKHTETNKTIEVTENGNHRNGTGEVKP 312

[Close]

BLAST of Carg10913 vs. ExPASy TrEMBL
Match: A0A6J1CQ83 (methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111013157 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 7.6e-103
Identity = 234/347 (67.44%), Postives = 261/347 (75.22%), Query Frame = 0


Query: 1   MAASVEKDTVNEEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQ 60
           MAASV+KD+ NEEVVS ELPAPPGWKKKFFPKQG SPKK EVIF TPTGEE +NKRKL+Q
Sbjct: 1   MAASVQKDSANEEVVSFELPAPPGWKKKFFPKQGKSPKKQEVIFTTPTGEEINNKRKLEQ 60

Query: 61  YLKSHPGGPASAEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 120
           YLK+HPGGPASAEFDWGTGETPRRSARISEKAK   PMESEHPKRKRTSVS+K LKE E 
Sbjct: 61  YLKAHPGGPASAEFDWGTGETPRRSARISEKAKATPPMESEHPKRKRTSVSRKDLKETEA 120

Query: 121 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADI 180
           EP EVLEE KEV++QDAGK ESIADAEVK+DDK E +DE                 + ++
Sbjct: 121 EP-EVLEEMKEVNDQDAGKYESIADAEVKNDDKMENQDE----------------KETEV 180

Query: 181 KDADKKENQDEKETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKE 240
           KD    ENQDE++TKDEAA AE  K D+QLNADN+AE  EHKIT+ES+QEKLERNLNEKE
Sbjct: 181 KD----ENQDEEKTKDEAAVAEAAKSDNQLNADNNAE--EHKITAESDQEKLERNLNEKE 240

Query: 241 PESSKLNLNENLEGAKHDEKIEQP------------------------------------ 300
           P+SSKLNLNENLEGAKH+EKIEQP                                    
Sbjct: 241 PDSSKLNLNENLEGAKHEEKIEQPQIEEKNDSNLGETAKPDTVISDVKESELEEKQKPNQ 300

Query: 301 QDIELEGEIKDKAAATEEKNEKHTETNKSIEATENGSHRNDAGEVKP 312
           QDIELEGEI+DKAAA  E +EKHTETN++ E TENG+H+NDAGEVKP
Sbjct: 301 QDIELEGEIEDKAAAALENSEKHTETNQTKEVTENGNHKNDAGEVKP 324

[Close]

BLAST of Carg10913 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 )

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-30
Identity = 109/306 (35.62%), Postives = 171/306 (55.88%), Query Frame = 0


Query: 12  EEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPAS 71
           +E+VS+ELPAP  WKK F+PK+  +P+K E++F+ PTGEE S++++L+QYLK+HPG P  
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVI 64

Query: 72  AEFDWGTGETPRRSARISEKAKVISPMESEHP--KRKRTSVSKKGLKEIETEPAEVLEEK 131
           +EF+W TGETPRRS+RIS+K K  +P   + P  K++R+S++KK  K    E AE  EE 
Sbjct: 65  SEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSSLTKKDNK----EAAEKNEEA 124

Query: 132 KEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQ 191
              +N D  KD    +AE + + + E   E AEA+          +N+ +  +A+K   +
Sbjct: 125 AVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAE--------KENNEGEKTEAEKVNKE 184

Query: 192 DE-----KETKDEAAEAEPPKPDDQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESS 251
            E     KE + E AEAE  K  ++  A+N   K+   +  + E  +++ +  EK+  S 
Sbjct: 185 GEKTEAGKEGQTEIAEAEKEKEGEKAEAEN---KEAEVVRDKKESMEVDTSELEKKAGSG 244

Query: 252 KLNLNENLEGAKHDEKIEQPQDIELE--GEIKDKAAATEEKNEKHTETNKSIEATENGSH 309
                   EGA+   K+E  +D E++   E+  +A   ++  E+ TE   S+    NG  
Sbjct: 245 --------EGAEEPSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQ 287

[Close]

BLAST of Carg10913 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 )

HSP 1 Score: 110.2 bits (274), Expect = 3.1e-24
Identity = 102/273 (37.36%), Postives = 135/273 (49.45%), Query Frame = 0


Query: 12  EEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPAS 71
           EEVVSVELPAP  WKK F+P +  S KK EV+F+ PTGEE SN+++L+QYLKSHPG PA 
Sbjct: 5   EEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAI 64

Query: 72  AEFDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIETEPAE-VLEEKK 131
           AEFDW T  TPRRSARISEK K     + E PK++  + S    K+ E E +E   EE  
Sbjct: 65  AEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENS 124

Query: 132 EVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDADIKDADKKENQD 191
            V + +    E IA+ E   D     + E                        D KEN  
Sbjct: 125 HVKDTEMNPPEGIAENENVTDKNGSGETERVN---------------------DAKENIV 184

Query: 192 EKETKDEAAEAEPPK--PDDQLNADNDAEKQEHKITSESEQEKLERNLNEKEPESSKLNL 251
            +ET + A   E  +   +  L++ +D  K+  K       EK   ++ +K  E+S    
Sbjct: 185 AEETPNAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKK 244

Query: 252 NENLEGAKHDEKIEQPQDIELEGEIKDKAAATE 282
           N   E   H+E       +  E E K+K A  E
Sbjct: 245 NSEAETRNHEE-----NGLTTEAEGKEKTAEGE 251

[Close]

BLAST of Carg10913 vs. TAIR 10
Match: AT1G15340.2 (methyl-CPG-binding domain 10 )

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-08
Identity = 92/335 (27.46%), Postives = 156/335 (46.57%), Query Frame = 0


Query: 12  EEVVSVELPAPPGWKKKFFPKQGNSPKKYEVIFITPTGEEFSNKRKLDQYLKSHPGGPAS 71
           +E+VS+ELPAP  WKK F+PK+  +P+K E++F+ PTGEE S++++L+QYLK +      
Sbjct: 5   DELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKDNKEAAEK 64

Query: 72  AE-----------FDWGTGETPRRSARISEKAKVISPMESEHPKRKRTSVSKKGLKEIET 131
            E            D  T        +  E    I+  E E+ + ++T   K   +  +T
Sbjct: 65  NEEAAVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKT 124

Query: 132 EPAEVLEEKKEVDNQDAGKDESIADAEVKDDDKNETKDEAAEADPPKPDDQLNADNDAD- 191
           E  +  E + E+   +  K+   A+AE K+ +    K E+ E D  + + +  +   A+ 
Sbjct: 125 EAGK--EGQTEIAEAEKEKEGEKAEAENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEE 184

Query: 192 ------IKDADKKENQD-------EKETKDEAAE----------AEPPKPDDQLNADNDA 251
                 +KD + KE Q+       EK+  +E  E           E      + N D DA
Sbjct: 185 PSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQNVTLGEPNLDADA 244

Query: 252 EKQEHKITSESEQEKLERNLNEKEPESSKLNLNENLEGAKHDEKIEQPQDIELEGEIKDK 310
           E  + K + E +++  E   N KE ++ + +  +  E A + E   Q  D++     K +
Sbjct: 245 EADKGKESKEYDEKTTEAEAN-KENDTQESD-EKKTEAAANKENETQESDVK-----KTE 304

The following BLAST results are available for this feature:

BLAST of Carg10913 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030379.1	4.5e-158	100.00	Methyl-CpG-binding domain-containing protein 10 [Cucurbita argyrosperma subsp. a...	[more]
XP_023545855.1	2.8e-152	89.60	methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo...	[more]
XP_022946072.1	1.4e-151	89.02	methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata]	[more]
KAG6599394.1	1.8e-151	89.31	Methyl-CpG-binding domain-containing protein 10, partial [Cucurbita argyrosperma...	[more]
XP_022999167.1	6.5e-149	88.15	methyl-CpG-binding domain-containing protein 11-like [Cucurbita maxima]	[more]

BLAST of Carg10913 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI36	1.8e-29	35.62	Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LW00	4.4e-23	37.36	Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg10913 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2N9	6.8e-152	89.02	methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1KA38	3.1e-149	88.15	methyl-CpG-binding domain-containing protein 11-like OS=Cucurbita maxima OX=3661...	[more]
A0A5D3BH67	1.4e-112	71.30	Methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo var. makuwa...	[more]
A0A1S3C687	1.4e-112	71.30	methyl-CpG-binding domain-containing protein 11-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1CQ83	7.6e-103	67.44	methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3...	[more]

BLAST of Carg10913 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15340.1	1.3e-30	35.62	methyl-CPG-binding domain 10	[more]
AT3G15790.1	3.1e-24	37.36	methyl-CPG-binding domain 11	[more]
AT1G15340.2	1.1e-08	27.46	methyl-CPG-binding domain 10	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 277..297
None	No IPR available	GENE3D	3.30.890.10		coord: 2..114 e-value: 1.0E-12 score: 50.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..311
None	No IPR available	PANTHER	PTHR33729:SF6	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE	coord: 2..306
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 16..79 e-value: 1.1E-10 score: 41.1
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 11..81 score: 14.366103
IPR039622	Methyl-CpG-binding domain-containing protein 10/11	PANTHER	PTHR33729	METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 2..306
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 12..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10913-RA	Carg10913-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding