Carg10908 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTATGGCAGATCTCTCAGGGGCTGTCGCCGTCGTGCTTTCCTTCCGCCACCGTAAATCCGCCGCCTCAGTTTCTTCCGGTGAGCAAAAACCACCAATTTTTTGTTTTATAATTTTATTTTCTATTTATTTTTTGGATTTTTTTTCCCCCTTGAAGTGGTGAAGAAGAAGAAGGGAAGAAAAAGAGTTCACTTTGCTGATGATTCAGCTGTTTGCAGTACTGAAGAGTTGCAGAGAAAAAACGGCTTAATTTTGGGGCCTTCGCCGCCGGTGGGTAGAGCTCCGCCACCGTCTTTGACGAGCCACGGTGGAGGAGGCAGCGGAATGCCGGCGAATAGGGTGGCGCTGTACAACGGAATCTTAAGGGATCGTTTGGTTCACAGGATGGCATATTCTCTTTAA ATGGCTATGGCAGATCTCTCAGGGGCTGTCGCCGTCGTGCTTTCCTTCCGCCACCGTAAATCCGCCGCCTCAGTTTCTTCCGTGGTGAAGAAGAAGAAGGGAAGAAAAAGAGTTCACTTTGCTGATGATTCAGCTGTTTGCAGTACTGAAGAGTTGCAGAGAAAAAACGGCTTAATTTTGGGGCCTTCGCCGCCGGTGGGTAGAGCTCCGCCACCGTCTTTGACGAGCCACGGTGGAGGAGGCAGCGGAATGCCGGCGAATAGGGTGGCGCTGTACAACGGAATCTTAAGGGATCGTTTGGTTCACAGGATGGCATATTCTCTTTAA ATGGCTATGGCAGATCTCTCAGGGGCTGTCGCCGTCGTGCTTTCCTTCCGCCACCGTAAATCCGCCGCCTCAGTTTCTTCCGTGGTGAAGAAGAAGAAGGGAAGAAAAAGAGTTCACTTTGCTGATGATTCAGCTGTTTGCAGTACTGAAGAGTTGCAGAGAAAAAACGGCTTAATTTTGGGGCCTTCGCCGCCGGTGGGTAGAGCTCCGCCACCGTCTTTGACGAGCCACGGTGGAGGAGGCAGCGGAATGCCGGCGAATAGGGTGGCGCTGTACAACGGAATCTTAAGGGATCGTTTGGTTCACAGGATGGCATATTCTCTTTAA MAMADLSGAVAVVLSFRHRKSAASVSSVVKKKKGRKRVHFADDSAVCSTEELQRKNGLILGPSPPVGRAPPPSLTSHGGGGSGMPANRVALYNGILRDRLVHRMAYSL Homology
BLAST of Carg10908 vs. NCBI nr
Match: KAG7030384.1 (hypothetical protein SDJN02_08731, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.4 bits (529), Expect = 3.1e-50 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of Carg10908 vs. NCBI nr
Match: XP_022946911.1 (uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata]) HSP 1 Score: 200.7 bits (509), Expect = 6.5e-48 Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Carg10908 vs. NCBI nr
Match: KAG6599399.1 (hypothetical protein SDJN03_09177, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 200.7 bits (509), Expect = 6.5e-48 Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Carg10908 vs. NCBI nr
Match: XP_022946910.1 (uncharacterized protein LOC111450851 isoform X1 [Cucurbita moschata]) HSP 1 Score: 195.3 bits (495), Expect = 2.7e-46 Identity = 106/117 (90.60%), Postives = 106/117 (90.60%), Query Frame = 0
BLAST of Carg10908 vs. NCBI nr
Match: XP_038890799.1 (uncharacterized protein LOC120080255 [Benincasa hispida]) HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30 Identity = 82/114 (71.93%), Postives = 86/114 (75.44%), Query Frame = 0
BLAST of Carg10908 vs. ExPASy TrEMBL
Match: A0A6J1G4X1 (uncharacterized protein LOC111450851 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450851 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48 Identity = 107/109 (98.17%), Postives = 107/109 (98.17%), Query Frame = 0
BLAST of Carg10908 vs. ExPASy TrEMBL
Match: A0A6J1G5C3 (uncharacterized protein LOC111450851 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450851 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46 Identity = 106/117 (90.60%), Postives = 106/117 (90.60%), Query Frame = 0
BLAST of Carg10908 vs. ExPASy TrEMBL
Match: A0A1S3C5Q6 (uncharacterized protein LOC103497202 OS=Cucumis melo OX=3656 GN=LOC103497202 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.8e-25 Identity = 77/116 (66.38%), Postives = 84/116 (72.41%), Query Frame = 0
BLAST of Carg10908 vs. ExPASy TrEMBL
Match: A0A0A0LIY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006280 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 8.4e-25 Identity = 72/115 (62.61%), Postives = 87/115 (75.65%), Query Frame = 0
BLAST of Carg10908 vs. ExPASy TrEMBL
Match: A0A5A7V7G5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00290 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 3.2e-16 Identity = 61/109 (55.96%), Postives = 67/109 (61.47%), Query Frame = 0
BLAST of Carg10908 vs. TAIR 10
Match: AT3G15760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04 Identity = 37/87 (42.53%), Postives = 48/87 (55.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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