Carg10867 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTCTTTCCGAGCCGACGCTCATTGTTAGCCTGAGAATCTCAGTGTTGGGGTTCGAATCAAGCTCAAAGACGCGGGCGTGATTTCCATTTCGTGGCATCCATGGAAGAAATACTCATTTGGAATCGTCGCAACCATCTCGACTTCCGATCTCGCTTCTGTAAGTTCATTCTCTTCCTCGGTTATGTCATTTTATTCCGCTTATCGTGCATTGTGGAGCTCTATTTGAACGAAATTTGAAAATCTTGTTACTCGGCTTGATTTAGTTTCTTATTCGACTTGATTCTGTCATCTTTAGGCTTTTGAATCGTTCTTAGATTTTGATAATGCTTCTCGTAAGCTAGGATCGATGGAAACAGAATTAAGTTTTTAATTTCTTGGATTTTGAAATCATTCCTAAAAGGTAATCATAAACAAAAAGAACTAAGATAAGAACATTGTTTAAGCTTCGTAGATTTAGAACATAATCTATTTTTTTAATATAAATTATTGGTATATTCGTAGTTTAATATGGTATTAGAATAGAAGATTAAACATACAAATCCCTGAAATATAATTTTCTCCTGATCAATATATTAAGCTCTCATGTACCAAGTTGGCTCTGTAATCAAGTCAGTGTTTGAGCTCACATACAAAAGGTAAAATGCCCCAAACACATTAAGTTAAGCCTTTTGGTTTAGTTTCAATATAACTTTCCTGTGCAAGAAAATTGGCTTTGATTCTTGCCTGCTTTCAGTATTTGATTTGTAATAATTTAAAGATGGTGAATGATCCACACATTGGGCAGCTTTGGCCTGCCAACGAAATCCATGAATCTTTCATTTGGTTGCTTGCGAGTCATTTTGAGCCCTCTTCTGGTTACTTTAGTGTAGAGCTATAAAATGCCAATATCATCTCTCATTGTCAAGCGATCCTTCTGAAAAAGATGACTGCGAAGAAAAGAAGAAAGGGGAAGAGAGACTGGCGAGCCTGAGCTGTACAAATGTTGAATGCTGAGTTAAGTATCCTCTGTTAATGTGACTTTCTATCCTGAAAATGGTGATTGAGAATGACAATATCTTGGTTGTTATTTGGAGTACCGCTTGAAACTGAATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTTGCAGTTTTGTTCAATCGATTTGCTGCAGATTGGTAAGCTTCTGTTAACATTGTCTTACATTAGTTTGCTCCATTCTTATGCCTTATAAGTGTTTCACAACTTTTAAGATTACCAAATGGTATAGAGTCGTTAGAACATGATGAAATAATCTTTAATCAAAAGATGGATGGATGTTATAAAGAGATGATCGAGGAGTTGTGAGGAACTCTAGTGATGTTTGGGCCATTGACAGGCTCTATGTTTCTCTTTGGGTGTCGATGACGACGGTTTTTTGTAATTACTCGATAGGTCTCATTTTACATGACTGGAACTCCTTTCTTTTGCTGGGCCTCCTTTTGTGGGTTTGTTTTTTTGGATGCCCTTGCACTCTTTCAGTTTTTCTCAATGAAAGTTCGGTTTCTTGTAAACTAAAAAAAATCAAATGATGGAAGTAGTCTAATAGAACGGCTAAGCTGATTCAGCATTTTGTTTTTTCTTTCATTTTTATTCGAATTTAATACTCCATGAGTTTGTAGGAATCCCAATAACTGAAATGTAATGTATGTCATGTATGAAGGCCCATCCCTGTTGTCATGTATGGTAAAGCTATCAAACAAAACAAGGGCATTCTGATATTGAAGTGTCATATTAGATCCAAAATTGTGTTTGCCCGCCCTTTGCCAATGGATAACCATTGAAAGTTCTGATCTATCTGTTTCTCTCTAGCACTCTATGGGGTAAATCAGTATGAACTTTTTAGCTATTGGATCAGTATAATTCCATGGGGCCTCTTTTCTTCATAATTTGGAACTGTTCTAGCAAATTCACCGACTCCTGAGAATGATTCACTTCAATTATTGAGTGGAGTGGGAGTATCTGATCCTCCATGATCAGTGGATATGAAAAGAACCTCTTGATGTGGATGAGTTTTGTCACAGTTCTACAGTCTCAAAAGCATCAAATAACCTTAGTTTTGAACTTCAGTTACTGCCCTTCAGATATTGTGCTTAGTGGAAATTATATATTTTGTACGACATATTGCTTTGACCCGTTACGTATTGTCGTTAGCCTCACAGTTTTAAAATGCGTCTGCTAGGGAAAGGTTTCCATACCCCTATCAGGAATGTTTCGTTCCCATCTCAAACCGATGTGAGATCTCAGGGGACCAGCGTCCTAGCTGGCACACCGCTCAGTGTCTGACTCTGATACCATTTGTAACATGTCAAACCCACCACTAGCAGATATTGTGCGTTTTGACCTATTACGTATCACCGTCAGCCTCATGATTTTAAAACGCATCTACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTCCCTTTTCCAACCGATGGGAGATCTCATATATTTAGTCCTCCTTTCTGATTTGTATTCAAGTTGTGGAAGATATTGATATTATATCCTAGAATGACCACATCATTATAATTATTGATACTAAACAAATAGAACTTAGCCAGATTCCTCTTTTTGACATAAGAGATAGCGTGGGCTTTTTTTGTATGGTTGCTTTCACTAAGGACAAACCGAGGAGAATAAAAGATATCACCTCTTGAATTGCACTATAACTACTTCTAGCCTCACGCACTAGTTGAGGATAAATCTCTTAATACTGATCATATTTATATTGTGATTAACAGAGCTCTTTCTCTTTTAAATACTTGAGTTACCATACTTCTTGCAGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGAGTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACGTCATCGGCATGGATGAAACGATCAAAATCAATGCCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAAGGGCCTGT TTTTTTTTCTTTCCGAGCCGACGCTCATTGTTAGCCTGAGAATCTCAGTGTTGGGGTTCGAATCAAGCTCAAAGACGCGGGCGTGATTTCCATTTCGTGGCATCCATGGAAGAAATACTCATTTGGAATCGTCGCAACCATCTCGACTTCCGATCTCGCTTCTGTAAGTTCATTCTCTTCCTCGGTTATGTCATTTTATTCCGCTTATCGTGCATTGTGGAGCTCTATTTGAACGAAATTTGAAAATCTTGTTACTCGGCTTGATTTAGTTTCTTATTCGACTTGATTCTGTCATCTTTAGGCTTTTGAATCGTTCTTAGATTTTGATAATGCTTCTCGTAAGCTAGGATCGATGGAAACAGAATTAAGTTTTTAATTTCTTGGATTTTGAAATCATTCCTAAAAGGTAATCATAAACAAAAAGAACTAAGATAAGAACATTGTTTAAGCTTCGTAGATTTAGAACATAATCTATTTTTTTAATATAAATTATTGGTATATTCGTAGTTTAATATGGTATTAGAATAGAAGATTAAACATACAAATCCCTGAAATATAATTTTCTCCTGATCAATATATTAAGCTCTCATGTACCAAGTTGGCTCTGTAATCAAGTCAGTGTTTGAGCTCACATACAAAAGGTAAAATGCCCCAAACACATTAAGTTAAGCCTTTTGGTTTAGTTTCAATATAACTTTCCTGTGCAAGAAAATTGGCTTTGATTCTTGCCTGCTTTCAGTATTTGATTTGTAATAATTTAAAGATGGTGAATGATCCACACATTGGGCAGCTTTGGCCTGCCAACGAAATCCATGAATCTTTCATTTGGTTGCTTGCGAGTCATTTTGAGCCCTCTTCTGGTTACTTTAGTGTAGAGCTATAAAATGCCAATATCATCTCTCATTGTCAAGCGATCCTTCTGAAAAAGATGACTGCGAAGAAAAGAAGAAAGGGGAAGAGAGACTGGCGAGCCTGAGCTGTACAAATGTTGAATGCTGAGTTAAGTATCCTCTGTTAATGTGACTTTCTATCCTGAAAATGGTGATTGAGAATGACAATATCTTGGTTGTTATTTGGAGTACCGCTTGAAACTGAATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTTGCAGTTTTGTTCAATCGATTTGCTGCAGATTGGCCCATCCCTGTTGTCATGTATGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGAGTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACGTCATCGGCATGGATGAAACGATCAAAATCAATGCCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAAGGGCCTGT ATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTTGCAGTTTTGTTCAATCGATTTGCTGCAGATTGGCCCATCCCTGTTGTCATGTATGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGAGTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACGTCATCGGCATGGATGAAACGATCAAAATCAATGCCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAA MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRLQFCSIDLLQIGPSLLSCMSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPADHPVASLSSKESLGSS Homology
BLAST of Carg10867 vs. NCBI nr
Match: KAG7030425.1 (hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 270.0 bits (689), Expect = 1.1e-68 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of Carg10867 vs. NCBI nr
Match: XP_022946647.1 (uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946649.1 uncharacterized protein LOC111450652 [Cucurbita moschata]) HSP 1 Score: 204.1 bits (518), Expect = 7.5e-49 Identity = 109/127 (85.83%), Postives = 111/127 (87.40%), Query Frame = 0
BLAST of Carg10867 vs. NCBI nr
Match: KAG6599447.1 (hypothetical protein SDJN03_09225, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164.5 bits (415), Expect = 6.5e-37 Identity = 85/91 (93.41%), Postives = 87/91 (95.60%), Query Frame = 0
BLAST of Carg10867 vs. NCBI nr
Match: KAG7021282.1 (hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35 Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of Carg10867 vs. NCBI nr
Match: KAG6586427.1 (hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150.6 bits (379), Expect = 9.8e-33 Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of Carg10867 vs. ExPASy TrEMBL
Match: A0A6J1G498 (uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC111450652 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 3.6e-49 Identity = 109/127 (85.83%), Postives = 111/127 (87.40%), Query Frame = 0
BLAST of Carg10867 vs. ExPASy TrEMBL
Match: A0A5A7V1X5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001200 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.6e-31 Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Carg10867 vs. ExPASy TrEMBL
Match: A0A0A0LKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 3.4e-31 Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Carg10867 vs. ExPASy TrEMBL
Match: A0A5D3CHP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00230 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 7.6e-31 Identity = 73/82 (89.02%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of Carg10867 vs. ExPASy TrEMBL
Match: A0A6A1UK22 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006893 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 2.4e-16 Identity = 54/76 (71.05%), Postives = 59/76 (77.63%), Query Frame = 0
BLAST of Carg10867 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related ) HSP 1 Score: 48.1 bits (113), Expect = 6.4e-06 Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0
BLAST of Carg10867 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 1.9e-05 Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of Carg10867 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). ) HSP 1 Score: 46.6 bits (109), Expect = 1.9e-05 Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of Carg10867 vs. TAIR 10
Match: AT3G56500.1 (serine-rich protein-related ) HSP 1 Score: 42.0 bits (97), Expect = 4.6e-04 Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 0
BLAST of Carg10867 vs. TAIR 10
Match: AT5G55980.1 (serine-rich protein-related ) HSP 1 Score: 42.0 bits (97), Expect = 4.6e-04 Identity = 33/74 (44.59%), Postives = 41/74 (55.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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