Carg10867 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg10867
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPeroxiredoxins prx-1 prx-2 prx-3
LocationCarg_Chr05: 11685952 .. 11689097 (-)
RNA-Seq ExpressionCarg10867
SyntenyCarg10867
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTCTTTCCGAGCCGACGCTCATTGTTAGCCTGAGAATCTCAGTGTTGGGGTTCGAATCAAGCTCAAAGACGCGGGCGTGATTTCCATTTCGTGGCATCCATGGAAGAAATACTCATTTGGAATCGTCGCAACCATCTCGACTTCCGATCTCGCTTCTGTAAGTTCATTCTCTTCCTCGGTTATGTCATTTTATTCCGCTTATCGTGCATTGTGGAGCTCTATTTGAACGAAATTTGAAAATCTTGTTACTCGGCTTGATTTAGTTTCTTATTCGACTTGATTCTGTCATCTTTAGGCTTTTGAATCGTTCTTAGATTTTGATAATGCTTCTCGTAAGCTAGGATCGATGGAAACAGAATTAAGTTTTTAATTTCTTGGATTTTGAAATCATTCCTAAAAGGTAATCATAAACAAAAAGAACTAAGATAAGAACATTGTTTAAGCTTCGTAGATTTAGAACATAATCTATTTTTTTAATATAAATTATTGGTATATTCGTAGTTTAATATGGTATTAGAATAGAAGATTAAACATACAAATCCCTGAAATATAATTTTCTCCTGATCAATATATTAAGCTCTCATGTACCAAGTTGGCTCTGTAATCAAGTCAGTGTTTGAGCTCACATACAAAAGGTAAAATGCCCCAAACACATTAAGTTAAGCCTTTTGGTTTAGTTTCAATATAACTTTCCTGTGCAAGAAAATTGGCTTTGATTCTTGCCTGCTTTCAGTATTTGATTTGTAATAATTTAAAGATGGTGAATGATCCACACATTGGGCAGCTTTGGCCTGCCAACGAAATCCATGAATCTTTCATTTGGTTGCTTGCGAGTCATTTTGAGCCCTCTTCTGGTTACTTTAGTGTAGAGCTATAAAATGCCAATATCATCTCTCATTGTCAAGCGATCCTTCTGAAAAAGATGACTGCGAAGAAAAGAAGAAAGGGGAAGAGAGACTGGCGAGCCTGAGCTGTACAAATGTTGAATGCTGAGTTAAGTATCCTCTGTTAATGTGACTTTCTATCCTGAAAATGGTGATTGAGAATGACAATATCTTGGTTGTTATTTGGAGTACCGCTTGAAACTGAATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTTGCAGTTTTGTTCAATCGATTTGCTGCAGATTGGTAAGCTTCTGTTAACATTGTCTTACATTAGTTTGCTCCATTCTTATGCCTTATAAGTGTTTCACAACTTTTAAGATTACCAAATGGTATAGAGTCGTTAGAACATGATGAAATAATCTTTAATCAAAAGATGGATGGATGTTATAAAGAGATGATCGAGGAGTTGTGAGGAACTCTAGTGATGTTTGGGCCATTGACAGGCTCTATGTTTCTCTTTGGGTGTCGATGACGACGGTTTTTTGTAATTACTCGATAGGTCTCATTTTACATGACTGGAACTCCTTTCTTTTGCTGGGCCTCCTTTTGTGGGTTTGTTTTTTTGGATGCCCTTGCACTCTTTCAGTTTTTCTCAATGAAAGTTCGGTTTCTTGTAAACTAAAAAAAATCAAATGATGGAAGTAGTCTAATAGAACGGCTAAGCTGATTCAGCATTTTGTTTTTTCTTTCATTTTTATTCGAATTTAATACTCCATGAGTTTGTAGGAATCCCAATAACTGAAATGTAATGTATGTCATGTATGAAGGCCCATCCCTGTTGTCATGTATGGTAAAGCTATCAAACAAAACAAGGGCATTCTGATATTGAAGTGTCATATTAGATCCAAAATTGTGTTTGCCCGCCCTTTGCCAATGGATAACCATTGAAAGTTCTGATCTATCTGTTTCTCTCTAGCACTCTATGGGGTAAATCAGTATGAACTTTTTAGCTATTGGATCAGTATAATTCCATGGGGCCTCTTTTCTTCATAATTTGGAACTGTTCTAGCAAATTCACCGACTCCTGAGAATGATTCACTTCAATTATTGAGTGGAGTGGGAGTATCTGATCCTCCATGATCAGTGGATATGAAAAGAACCTCTTGATGTGGATGAGTTTTGTCACAGTTCTACAGTCTCAAAAGCATCAAATAACCTTAGTTTTGAACTTCAGTTACTGCCCTTCAGATATTGTGCTTAGTGGAAATTATATATTTTGTACGACATATTGCTTTGACCCGTTACGTATTGTCGTTAGCCTCACAGTTTTAAAATGCGTCTGCTAGGGAAAGGTTTCCATACCCCTATCAGGAATGTTTCGTTCCCATCTCAAACCGATGTGAGATCTCAGGGGACCAGCGTCCTAGCTGGCACACCGCTCAGTGTCTGACTCTGATACCATTTGTAACATGTCAAACCCACCACTAGCAGATATTGTGCGTTTTGACCTATTACGTATCACCGTCAGCCTCATGATTTTAAAACGCATCTACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTCCCTTTTCCAACCGATGGGAGATCTCATATATTTAGTCCTCCTTTCTGATTTGTATTCAAGTTGTGGAAGATATTGATATTATATCCTAGAATGACCACATCATTATAATTATTGATACTAAACAAATAGAACTTAGCCAGATTCCTCTTTTTGACATAAGAGATAGCGTGGGCTTTTTTTGTATGGTTGCTTTCACTAAGGACAAACCGAGGAGAATAAAAGATATCACCTCTTGAATTGCACTATAACTACTTCTAGCCTCACGCACTAGTTGAGGATAAATCTCTTAATACTGATCATATTTATATTGTGATTAACAGAGCTCTTTCTCTTTTAAATACTTGAGTTACCATACTTCTTGCAGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGAGTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACGTCATCGGCATGGATGAAACGATCAAAATCAATGCCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAAGGGCCTGT

mRNA sequence

TTTTTTTTCTTTCCGAGCCGACGCTCATTGTTAGCCTGAGAATCTCAGTGTTGGGGTTCGAATCAAGCTCAAAGACGCGGGCGTGATTTCCATTTCGTGGCATCCATGGAAGAAATACTCATTTGGAATCGTCGCAACCATCTCGACTTCCGATCTCGCTTCTGTAAGTTCATTCTCTTCCTCGGTTATGTCATTTTATTCCGCTTATCGTGCATTGTGGAGCTCTATTTGAACGAAATTTGAAAATCTTGTTACTCGGCTTGATTTAGTTTCTTATTCGACTTGATTCTGTCATCTTTAGGCTTTTGAATCGTTCTTAGATTTTGATAATGCTTCTCGTAAGCTAGGATCGATGGAAACAGAATTAAGTTTTTAATTTCTTGGATTTTGAAATCATTCCTAAAAGGTAATCATAAACAAAAAGAACTAAGATAAGAACATTGTTTAAGCTTCGTAGATTTAGAACATAATCTATTTTTTTAATATAAATTATTGGTATATTCGTAGTTTAATATGGTATTAGAATAGAAGATTAAACATACAAATCCCTGAAATATAATTTTCTCCTGATCAATATATTAAGCTCTCATGTACCAAGTTGGCTCTGTAATCAAGTCAGTGTTTGAGCTCACATACAAAAGGTAAAATGCCCCAAACACATTAAGTTAAGCCTTTTGGTTTAGTTTCAATATAACTTTCCTGTGCAAGAAAATTGGCTTTGATTCTTGCCTGCTTTCAGTATTTGATTTGTAATAATTTAAAGATGGTGAATGATCCACACATTGGGCAGCTTTGGCCTGCCAACGAAATCCATGAATCTTTCATTTGGTTGCTTGCGAGTCATTTTGAGCCCTCTTCTGGTTACTTTAGTGTAGAGCTATAAAATGCCAATATCATCTCTCATTGTCAAGCGATCCTTCTGAAAAAGATGACTGCGAAGAAAAGAAGAAAGGGGAAGAGAGACTGGCGAGCCTGAGCTGTACAAATGTTGAATGCTGAGTTAAGTATCCTCTGTTAATGTGACTTTCTATCCTGAAAATGGTGATTGAGAATGACAATATCTTGGTTGTTATTTGGAGTACCGCTTGAAACTGAATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTTGCAGTTTTGTTCAATCGATTTGCTGCAGATTGGCCCATCCCTGTTGTCATGTATGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGAGTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACGTCATCGGCATGGATGAAACGATCAAAATCAATGCCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAAGGGCCTGT

Coding sequence (CDS)

ATGCTCTTTTCTCATGATTGTTGCAGGCTGTTATTGGTTGTGTACTATATACCAAATAACTTAATCTCTGATGAACAACAAGTACAGAATTGCCGTTTGCAGTTTTGTTCAATCGATTTGCTGCAGATTGGCCCATCCCTGTTGTCATGTATGTCTGCAGATATGGCCTCTGATGGCAGCCTTAGCGTTGTGGTTTCCACATCTCCTAAACATGGCAACAGAGATGCTGAGACCGTGAGGTCGAGTTCGCCGAAAGGCCAGTGTTTATGCTCACCCACGATGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACGTCATCGGCATGGATGAAACGATCAAAATCAATGCCTGCCGACCACCCTGTGGCTTCTCTTTCTTCCAAAGAATCTCTTGGATCATCCTAA

Protein sequence

MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRLQFCSIDLLQIGPSLLSCMSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPADHPVASLSSKESLGSS
Homology
BLAST of Carg10867 vs. NCBI nr
Match: KAG7030425.1 (hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270.0 bits (689), Expect = 1.1e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0

Query: 1   MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRLQFCSIDLLQIGPSLLSCMSADMASDGS 60
           MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRLQFCSIDLLQIGPSLLSCMSADMASDGS
Sbjct: 1   MLFSHDCCRLLLVVYYIPNNLISDEQQVQNCRLQFCSIDLLQIGPSLLSCMSADMASDGS 60

Query: 61  LSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 120
           LSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA
Sbjct: 61  LSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 120

Query: 121 DHPVASLSSKESLGSS 137
           DHPVASLSSKESLGSS
Sbjct: 121 DHPVASLSSKESLGSS 136

BLAST of Carg10867 vs. NCBI nr
Match: XP_022946647.1 (uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946649.1 uncharacterized protein LOC111450652 [Cucurbita moschata])

HSP 1 Score: 204.1 bits (518), Expect = 7.5e-49
Identity = 109/127 (85.83%), Postives = 111/127 (87.40%), Query Frame = 0

Query: 10  LLLVVYYIPNNLISDEQQVQNCRLQFCSIDLLQIGPSLLSCMSADMASDGSLSVVVSTSP 69
           LLLVVYYIPNNLISDEQQVQNCR  F          S+   +SADMASDGSLSVVVSTSP
Sbjct: 6   LLLVVYYIPNNLISDEQQVQNCRCSFVQ--------SICCRLSADMASDGSLSVVVSTSP 65

Query: 70  KHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPADHPVASLSS 129
           KHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPADHPVASLSS
Sbjct: 66  KHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSS 124

Query: 130 KESLGSS 137
           KESLGSS
Sbjct: 126 KESLGSS 124

BLAST of Carg10867 vs. NCBI nr
Match: KAG6599447.1 (hypothetical protein SDJN03_09225, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164.5 bits (415), Expect = 6.5e-37
Identity = 85/91 (93.41%), Postives = 87/91 (95.60%), Query Frame = 0

Query: 46  SLLSCMSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHR 105
           S+   +SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHR
Sbjct: 14  SICCRLSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHR 73

Query: 106 STSSAWMKRSKSMPADHPVASLSSKESLGSS 137
           S SSAWMKRSKSMPADHPVASLSSKESLGSS
Sbjct: 74  SMSSAWMKRSKSMPADHPVASLSSKESLGSS 104

BLAST of Carg10867 vs. NCBI nr
Match: KAG7021282.1 (hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 83/104 (79.81%), Postives = 91/104 (87.50%), Query Frame = 0

Query: 33  LQFCSIDLLQIGPSLLSCMSADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSP 92
           LQF +  +L + P +L   SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSP
Sbjct: 5   LQFPAAPMLTVRPEILGVRSADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSP 64

Query: 93  TMHQGSFRCRLHRSTSSAWMKRSKSMPADHPVASLSSKESLGSS 137
           TMHQGSFRCRLHRSTSSAWMKRSKSMPA+ PVASLS KE+LGSS
Sbjct: 65  TMHQGSFRCRLHRSTSSAWMKRSKSMPANKPVASLSPKETLGSS 108

BLAST of Carg10867 vs. NCBI nr
Match: KAG6586427.1 (hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150.6 bits (379), Expect = 9.8e-33
Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = 0

Query: 52  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAW 111
           SADMAS+GSLSVVVS SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAW
Sbjct: 57  SADMASNGSLSVVVSASPKHDNRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAW 116

Query: 112 MKRSKSMPADHPVASLSSKESLGSS 137
           MKRSKSMPA+ PVASLS KE+LGSS
Sbjct: 117 MKRSKSMPANKPVASLSPKETLGSS 141

BLAST of Carg10867 vs. ExPASy TrEMBL
Match: A0A6J1G498 (uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC111450652 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.6e-49
Identity = 109/127 (85.83%), Postives = 111/127 (87.40%), Query Frame = 0

Query: 10  LLLVVYYIPNNLISDEQQVQNCRLQFCSIDLLQIGPSLLSCMSADMASDGSLSVVVSTSP 69
           LLLVVYYIPNNLISDEQQVQNCR  F          S+   +SADMASDGSLSVVVSTSP
Sbjct: 6   LLLVVYYIPNNLISDEQQVQNCRCSFVQ--------SICCRLSADMASDGSLSVVVSTSP 65

Query: 70  KHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPADHPVASLSS 129
           KHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRS SSAWMKRSKSMPADHPVASLSS
Sbjct: 66  KHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAWMKRSKSMPADHPVASLSS 124

Query: 130 KESLGSS 137
           KESLGSS
Sbjct: 126 KESLGSS 124

BLAST of Carg10867 vs. ExPASy TrEMBL
Match: A0A5A7V1X5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001200 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.6e-31
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0

Query: 55  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 114
           MASDGSL V VSTSPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 115 SKSMPADHPVASLSSKESLGSS 137
           SKSMPA++PVASLS K SLGSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

BLAST of Carg10867 vs. ExPASy TrEMBL
Match: A0A0A0LKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.4e-31
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0

Query: 55  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 114
           MASDGSLSV VSTSPKH NRDAETVRS+SPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 115 SKSMPADHPVASLSSKESLGSS 137
           SKSMP ++PVASLS KESL SS
Sbjct: 61  SKSMPTNNPVASLSPKESLESS 82

BLAST of Carg10867 vs. ExPASy TrEMBL
Match: A0A5D3CHP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00230 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 7.6e-31
Identity = 73/82 (89.02%), Postives = 77/82 (93.90%), Query Frame = 0

Query: 55  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 114
           MASDGSL V VS+SPKH NRDAET+RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 115 SKSMPADHPVASLSSKESLGSS 137
           SKSMPA++PVASLS K SLGSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

BLAST of Carg10867 vs. ExPASy TrEMBL
Match: A0A6A1UK22 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006893 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.4e-16
Identity = 54/76 (71.05%), Postives = 59/76 (77.63%), Query Frame = 0

Query: 55  MASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 114
           MAS GS  + VST+PK G  +A T  S SPKGQCLCSPT H+GSFRCRLHRS SSAWMKR
Sbjct: 1   MASRGS-QLSVSTTPKSGKGEAVTGASDSPKGQCLCSPTTHKGSFRCRLHRS-SSAWMKR 60

Query: 115 SKSMPADHPVASLSSK 131
           SKSMPA   VA+LS K
Sbjct: 61  SKSMPASSSVAALSPK 74

BLAST of Carg10867 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 48.1 bits (113), Expect = 6.4e-06
Identity = 21/42 (50.00%), Postives = 28/42 (66.67%), Query Frame = 0

Query: 80  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPAD 122
           +SSS +  CLC+PT H GSFRCR HR  +   M R  S+P++
Sbjct: 57  KSSSVRQNCLCAPTTHPGSFRCRYHRRNAGLGMSRGTSVPSN 98

BLAST of Carg10867 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-05
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0

Query: 80  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 121
           ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 36  QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

BLAST of Carg10867 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 46.6 bits (109), Expect = 1.9e-05
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0

Query: 80  RSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPA 121
           ++S  K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 36  QTSMTKTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

BLAST of Carg10867 vs. TAIR 10
Match: AT3G56500.1 (serine-rich protein-related )

HSP 1 Score: 42.0 bits (97), Expect = 4.6e-04
Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 0

Query: 85  KGQCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSMPADHPVAS 127
           K  C+C+PT H+GSFRCRLHRS++++    +  +    P+ S
Sbjct: 62  KTVCICAPTKHEGSFRCRLHRSSATSHGAATAELHLPKPLLS 103

BLAST of Carg10867 vs. TAIR 10
Match: AT5G55980.1 (serine-rich protein-related )

HSP 1 Score: 42.0 bits (97), Expect = 4.6e-04
Identity = 33/74 (44.59%), Postives = 41/74 (55.41%), Query Frame = 0

Query: 62  SVVVSTSPKHGNRDAETVRSSSPKG---QCLCSPTMHQGSFRCRLHRSTSSAWMKRSKSM 121
           S V S S  + +   +  RSSS K     CLCSPT H GSFRCR HR  S   + R+ S+
Sbjct: 35  STVESKSQDNNSPSLKRWRSSSGKSTRLNCLCSPTTHAGSFRCRYHRVDS---LTRAGSI 94

Query: 122 PADHPVASLSSKES 133
            ++  V  LSSK S
Sbjct: 95  GSNLAVL-LSSKSS 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7030425.11.1e-68100.00hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022946647.17.5e-4985.83uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 unchar... [more]
KAG6599447.16.5e-3793.41hypothetical protein SDJN03_09225, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7021282.11.6e-3579.81hypothetical protein SDJN02_17970, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6586427.19.8e-3390.59hypothetical protein SDJN03_19160, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1G4983.6e-4985.83uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC1114506... [more]
A0A5A7V1X52.6e-3190.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LKU33.4e-3190.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1[more]
A0A5D3CHP37.6e-3189.02Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6A1UK222.4e-1671.05Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR0G006893 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G13227.16.4e-0650.00serine-rich protein-related [more]
AT1G67910.11.9e-0556.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G67910.21.9e-0556.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G56500.14.6e-0442.86serine-rich protein-related [more]
AT5G55980.14.6e-0444.59serine-rich protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..136
NoneNo IPR availablePANTHERPTHR33132OSJNBB0118P14.9 PROTEINcoord: 53..129
NoneNo IPR availablePANTHERPTHR33132:SF37SERINE-RICH PROTEIN-LIKE PROTEINcoord: 53..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg10867-RACarg10867-RAmRNA