Carg10854 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10854
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SPEAR1-like
Location	Carg_Chr05: 11753202 .. 11754433 (+)
RNA-Seq Expression	Carg10854
Synteny	Carg10854

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGTGGCTATTTTGGGGAGATGAATATGGGGAATAATAATATTGATAAGAGGAGAAGTGGGTCGCCGTCGGCGGCGGCGGCGGTGGCGACGGTGGTGAGGAGAGGGAGGAAGGGAGGCGGTGGAGAGAAGCCGAAGCAGCCGCAGAGAGGGTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGTTGTGCGGCTTACGGCCACCCGTATCCAAATCTCTCCGCCGTAAATCTCTCCCTCTCTCTCTCTCTCTCTAAGAAGAGAGATTAAAAATAATATTTCTTCTTATGATTTAGGGTTTCTTTTGTGTTCATGTAGAGCGATGACATGAGAATTGAAACGGCGTCGTCTTCATCTCCTTCCTATGGCTTCCGCCAAAACTTTATGGTAACTCTCTCTCTCTCTCTCTAAACTCCTTCTCTCTCTAGAATTTCATAGAAATAAAAATATTTTATTACCAACAAATATTTGAATTTATGAACTCCCATAAATAAAAACGTTTAATTGGTAAATCTCTGTATGAATTCAAACCGAACGTTTTAATACTAAGTTACACTCATATTAACAGATCCCGAGAAAAGATTTAATTTATGATCTCAAAAATTAAAAATTAAAAATAAAAGATTTCCTTTAAATAAATCACATTAATCCTAAAAAATAAATGGATAAAATTCGTAACAATTTGATAATTATTGAATAAATTTATTTATTTATTTAATTTTAATTATAATTTTATTTGTTTATTTTTACTTTAAATGGATTCCCAGGGATATGGTGATTCTCAGCCAACAACCTCTCTAAGGTAACGTAAGATTTATTTATCCATCGTAATTACATTATTATTATTATTTGTAAATTTAGATATTTAATTTACTATTAATTGCTAATTATTTATTAATTTGTGATAATTTAGATGGGACCCAACTCATACATTCTTGGAGACCCAACATTTCGGGCAACCAAACATGACCGGACACCTTTTCAATACTCATGTACAGGTCAGTTAATATATTTTTCTCTTTAAATTAACTTAATTTTAATGTAATTTCCCACAAATTTATATGAAAAAAAAATCTAATTTTCATAATTCGAAAAAAATGCAGGATTCAATTCACGGGAACATAAATGTAAAATACGGGGGTGATTCAATGAGATCAAGCAGCCAGAATTCTGAATCGAGTGAACTGGATTTGGAGCTTAGATTGTCAATTTAA

mRNA sequence

ATGGGGAGTGGCTATTTTGGGGAGATGAATATGGGGAATAATAATATTGATAAGAGGAGAAGTGGGTCGCCGTCGGCGGCGGCGGCGGTGGCGACGGTGGTGAGGAGAGGGAGGAAGGGAGGCGGTGGAGAGAAGCCGAAGCAGCCGCAGAGAGGGTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGTTGTGCGGCTTACGGCCACCCGTATCCAAATCTCTCCGCCAGCGATGACATGAGAATTGAAACGGCGTCGTCTTCATCTCCTTCCTATGGCTTCCGCCAAAACTTTATGGGATATGGTGATTCTCAGCCAACAACCTCTCTAAGATGGGACCCAACTCATACATTCTTGGAGACCCAACATTTCGGGCAACCAAACATGACCGGACACCTTTTCAATACTCATGTACAGGATTCAATTCACGGGAACATAAATGTAAAATACGGGGGTGATTCAATGAGATCAAGCAGCCAGAATTCTGAATCGAGTGAACTGGATTTGGAGCTTAGATTGTCAATTTAA

Coding sequence (CDS)

ATGGGGAGTGGCTATTTTGGGGAGATGAATATGGGGAATAATAATATTGATAAGAGGAGAAGTGGGTCGCCGTCGGCGGCGGCGGCGGTGGCGACGGTGGTGAGGAGAGGGAGGAAGGGAGGCGGTGGAGAGAAGCCGAAGCAGCCGCAGAGAGGGTTGGGAGTTGCTCAGTTGGAGAAGATCAGATTGCATGGCGAAATGGGTTGTGCGGCTTACGGCCACCCGTATCCAAATCTCTCCGCCAGCGATGACATGAGAATTGAAACGGCGTCGTCTTCATCTCCTTCCTATGGCTTCCGCCAAAACTTTATGGGATATGGTGATTCTCAGCCAACAACCTCTCTAAGATGGGACCCAACTCATACATTCTTGGAGACCCAACATTTCGGGCAACCAAACATGACCGGACACCTTTTCAATACTCATGTACAGGATTCAATTCACGGGAACATAAATGTAAAATACGGGGGTGATTCAATGAGATCAAGCAGCCAGAATTCTGAATCGAGTGAACTGGATTTGGAGCTTAGATTGTCAATTTAA

Protein sequence

MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEKIRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPTHTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI

Homology

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BLAST of Carg10854 vs. NCBI nr
Match: KAG6599460.1 (Protein SPEAR1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030438.1 Protein SPEAR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.8 bits (930), Expect = 1.7e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT 120
           IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT
Sbjct: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT 120

Query: 121 HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI 180
           HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI
Sbjct: 121 HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI 180

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BLAST of Carg10854 vs. NCBI nr
Match: XP_022946617.1 (protein SPEAR1-like [Cucurbita moschata])

HSP 1 Score: 359.8 bits (922), Expect = 1.4e-95
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGSGYFGEMNMGNN IDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEMNMGNNYIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT 120
           IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT
Sbjct: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT 120

Query: 121 HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI 180
           HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI
Sbjct: 121 HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI 180

[Close]

BLAST of Carg10854 vs. NCBI nr
Match: XP_023522169.1 (protein SPEAR1-like [Cucurbita pepo subsp. pepo] >XP_023547325.1 protein SPEAR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.1 bits (858), Expect = 3.7e-88
Identity = 173/191 (90.58%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRK-GGGGEKPKQPQRGLGVAQLE 60
           MGSGYFGEMNMGNNNIDKRRSGSPS+AAAVATVVRRGRK GGGGEKPKQPQRGLGVAQLE
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGSPSSAAAVATVVRRGRKGGGGGEKPKQPQRGLGVAQLE 60

Query: 61  KIRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFM----------GYGDS 120
           KIRLHGEMGCAAYGH YPNLSASDDMRIETASSSSPSYGF QNFM          GYGDS
Sbjct: 61  KIRLHGEMGCAAYGHLYPNLSASDDMRIETASSSSPSYGFHQNFMGMGEHERGSFGYGDS 120

Query: 121 QPTTSLRWDPTHTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSES 180
           QP TSLRWDPTHTFLETQHFGQPNMTGHLFNTH+QDSIHGNINVKYG DSM SSSQNSES
Sbjct: 121 QPITSLRWDPTHTFLETQHFGQPNMTGHLFNTHLQDSIHGNINVKYGSDSMTSSSQNSES 180

[Close]

BLAST of Carg10854 vs. NCBI nr
Match: XP_022999538.1 (protein SPEAR3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 320.5 bits (820), Expect = 9.4e-84
Identity = 163/180 (90.56%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGSGYFGEMNMGNNNIDKRRSGS       A VVRRGRKGGGGEKPKQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGS-------AAVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT 120
           IRLHGEMGCAAYGHPYP LSASDDMRIETASSSSPSYGF QNFMG GDSQPTTSLRWDP+
Sbjct: 61  IRLHGEMGCAAYGHPYPYLSASDDMRIETASSSSPSYGFHQNFMGCGDSQPTTSLRWDPS 120

Query: 121 HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI 180
           HTFLET HFGQPNMTGHLFNTHVQDSI GNINVKYG DSMR S QNSESSELDLELRLSI
Sbjct: 121 HTFLETHHFGQPNMTGHLFNTHVQDSIQGNINVKYGSDSMRLSRQNSESSELDLELRLSI 173

[Close]

BLAST of Carg10854 vs. NCBI nr
Match: XP_022999537.1 (protein SPEAR3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 2.0e-81
Identity = 163/190 (85.79%), Postives = 164/190 (86.32%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGSGYFGEMNMGNNNIDKRRSGS       A VVRRGRKGGGGEKPKQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGS-------AAVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGY----------GDSQ 120
           IRLHGEMGCAAYGHPYP LSASDDMRIETASSSSPSYGF QNFMG           GDSQ
Sbjct: 61  IRLHGEMGCAAYGHPYPYLSASDDMRIETASSSSPSYGFHQNFMGMGEHERGSLRCGDSQ 120

Query: 121 PTTSLRWDPTHTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESS 180
           PTTSLRWDP+HTFLET HFGQPNMTGHLFNTHVQDSI GNINVKYG DSMR S QNSESS
Sbjct: 121 PTTSLRWDPSHTFLETHHFGQPNMTGHLFNTHVQDSIQGNINVKYGSDSMRLSRQNSESS 180

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BLAST of Carg10854 vs. ExPASy Swiss-Prot
Match: Q84X40 (Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-24
Identity = 78/187 (41.71%), Postives = 112/187 (59.89%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGS +FG  N+  ++     S SP+++++ +   RRG+K  G EKPKQPQRGLGVAQLEK
Sbjct: 1   MGSTFFGRPNVVGSS---PPSSSPTSSSS-SPATRRGKK-NGSEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPS-----YGFRQNFM--GYGDSQPTT 120
           IRLHGEM C ++    P+L   +D+R++   SS PS     YGF  N M   + D     
Sbjct: 61  IRLHGEMSCNSFNSYNPSLYPQEDVRMQGGYSSIPSQSSAPYGFYPNMMMGVHRDQYDRA 120

Query: 121 SLRWDPTHTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELD 180
           ++ W+P++  LE+QH  +PN+T H  N   +D        K  G  ++ S  +SE+ E+D
Sbjct: 121 TMSWNPSYGILESQHSLEPNITRHFLN---EDPSSTTRRSKSLGSGIQHSG-SSENQEVD 178

[Close]

BLAST of Carg10854 vs. ExPASy Swiss-Prot
Match: Q6IDB0 (Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.7e-24
Identity = 83/210 (39.52%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGS +FG   MG ++     S S S A       +RG+   G +KPKQPQRGLGVAQLEK
Sbjct: 1   MGSSFFGRPKMGGSSSSSPTSSSSSPA-------KRGKNKNGSDKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSAS---DDMRIE----TASSSSPS------------YGFRQ 120
           IRLHGE  C ++ + YP+   S   +D+RI+    +  SSSPS            YGF  
Sbjct: 61  IRLHGEYNCNSF-NTYPSYHPSTYQEDVRIQGGYPSIPSSSPSFSYASSSPPPAPYGFHP 120

Query: 121 NFM-------------GYGDSQPTTSLRWDPTHTFLETQHFGQPNMTGHLFNTHVQDSIH 179
           N M              YGDSQP  +  W+P++  LE+QHF +PN T H  +   +    
Sbjct: 121 NMMMNANNDQYERTTIRYGDSQPHRAPSWNPSYGILESQHFVEPNTTRHFLHEDQR---- 180

[Close]

BLAST of Carg10854 vs. ExPASy TrEMBL
Match: A0A6J1G472 (protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111450631 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 6.8e-96
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGSGYFGEMNMGNN IDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEMNMGNNYIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT 120
           IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT
Sbjct: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT 120

Query: 121 HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI 180
           HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI
Sbjct: 121 HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI 180

[Close]

BLAST of Carg10854 vs. ExPASy TrEMBL
Match: A0A6J1KJZ3 (protein SPEAR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 163/180 (90.56%), Postives = 164/180 (91.11%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGSGYFGEMNMGNNNIDKRRSGS       A VVRRGRKGGGGEKPKQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGS-------AAVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT 120
           IRLHGEMGCAAYGHPYP LSASDDMRIETASSSSPSYGF QNFMG GDSQPTTSLRWDP+
Sbjct: 61  IRLHGEMGCAAYGHPYPYLSASDDMRIETASSSSPSYGFHQNFMGCGDSQPTTSLRWDPS 120

Query: 121 HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI 180
           HTFLET HFGQPNMTGHLFNTHVQDSI GNINVKYG DSMR S QNSESSELDLELRLSI
Sbjct: 121 HTFLETHHFGQPNMTGHLFNTHVQDSIQGNINVKYGSDSMRLSRQNSESSELDLELRLSI 173

[Close]

BLAST of Carg10854 vs. ExPASy TrEMBL
Match: A0A6J1KB48 (protein SPEAR3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.5e-82
Identity = 163/190 (85.79%), Postives = 164/190 (86.32%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGSGYFGEMNMGNNNIDKRRSGS       A VVRRGRKGGGGEKPKQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEMNMGNNNIDKRRSGS-------AAVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGY----------GDSQ 120
           IRLHGEMGCAAYGHPYP LSASDDMRIETASSSSPSYGF QNFMG           GDSQ
Sbjct: 61  IRLHGEMGCAAYGHPYPYLSASDDMRIETASSSSPSYGFHQNFMGMGEHERGSLRCGDSQ 120

Query: 121 PTTSLRWDPTHTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESS 180
           PTTSLRWDP+HTFLET HFGQPNMTGHLFNTHVQDSI GNINVKYG DSMR S QNSESS
Sbjct: 121 PTTSLRWDPSHTFLETHHFGQPNMTGHLFNTHVQDSIQGNINVKYGSDSMRLSRQNSESS 180

[Close]

BLAST of Carg10854 vs. ExPASy TrEMBL
Match: A0A1S3C7M3 (protein SPEAR1 OS=Cucumis melo OX=3656 GN=LOC103497912 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 6.2e-65
Identity = 150/209 (71.77%), Postives = 160/209 (76.56%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGSGYFGEM    NNI+KRRSGSP+AA       RRGRKGGGGEKPKQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEM----NNIEKRRSGSPAAAGG-----RRGRKGGGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIET------------ASSSSP-SYGFRQNFMG-- 120
           IRLHGEMGCAAY H YPNLSA DDMR++T            +SSSSP SYGF QNFMG  
Sbjct: 61  IRLHGEMGCAAYSHFYPNLSAGDDMRMQTTTPSNFSYSSTQSSSSSPNSYGFHQNFMGMG 120

Query: 121 --------YGDSQPTT--SLRWDPTHTFLETQHFGQPNMTGHLFNTHVQDS-IHGNINVK 180
                   YGDSQ TT  SLRWDP++TFLETQHFGQPNM+GHLFN+HVQDS IH N+N K
Sbjct: 121 EYERGSFRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNSHVQDSIIHNNMNTK 180

[Close]

BLAST of Carg10854 vs. ExPASy TrEMBL
Match: A0A0A0LFV0 (SPOROCYTELESS-like EAR-containing protein 1 OS=Cucumis sativus OX=3659 GN=SPEAR1 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 5.3e-64
Identity = 150/210 (71.43%), Postives = 158/210 (75.24%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGSGYFGEM    NNI+KRRSGSPSAA       RRGRKGGGGEKPKQPQRGLGVAQLEK
Sbjct: 1   MGSGYFGEM----NNIEKRRSGSPSAAGG-----RRGRKGGGGEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIET-------------ASSSSP-SYGFRQNFMG- 120
           IRLHGEMGCAAY H YPNLSA DD R++T             +S+SSP SYGF QNFMG 
Sbjct: 61  IRLHGEMGCAAYSHFYPNLSAGDDRRMQTTTTPNFSYSSTHESSASSPNSYGFHQNFMGM 120

Query: 121 ---------YGDSQPTT--SLRWDPTHTFLETQHFGQPNMTGHLFNTHVQDS-IHGNINV 180
                    YGDSQ TT  SLRWDP++TFLETQHFGQPNM+GHLFN HVQDS IH NIN 
Sbjct: 121 GEYERGSFRYGDSQLTTTSSLRWDPSNTFLETQHFGQPNMSGHLFNPHVQDSMIHKNINT 180

[Close]

BLAST of Carg10854 vs. TAIR 10
Match: AT2G20080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 9.6e-26
Identity = 78/187 (41.71%), Postives = 112/187 (59.89%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGS +FG  N+  ++     S SP+++++ +   RRG+K  G EKPKQPQRGLGVAQLEK
Sbjct: 1   MGSTFFGRPNVVGSS---PPSSSPTSSSS-SPATRRGKK-NGSEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPS-----YGFRQNFM--GYGDSQPTT 120
           IRLHGEM C ++    P+L   +D+R++   SS PS     YGF  N M   + D     
Sbjct: 61  IRLHGEMSCNSFNSYNPSLYPQEDVRMQGGYSSIPSQSSAPYGFYPNMMMGVHRDQYDRA 120

Query: 121 SLRWDPTHTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELD 180
           ++ W+P++  LE+QH  +PN+T H  N   +D        K  G  ++ S  +SE+ E+D
Sbjct: 121 TMSWNPSYGILESQHSLEPNITRHFLN---EDPSSTTRRSKSLGSGIQHSG-SSENQEVD 178

[Close]

BLAST of Carg10854 vs. TAIR 10
Match: AT4G28840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20080.1); Has 71 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 4.8e-25
Identity = 83/210 (39.52%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGS +FG   MG ++     S S S A       +RG+   G +KPKQPQRGLGVAQLEK
Sbjct: 1   MGSSFFGRPKMGGSSSSSPTSSSSSPA-------KRGKNKNGSDKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSAS---DDMRIE----TASSSSPS------------YGFRQ 120
           IRLHGE  C ++ + YP+   S   +D+RI+    +  SSSPS            YGF  
Sbjct: 61  IRLHGEYNCNSF-NTYPSYHPSTYQEDVRIQGGYPSIPSSSPSFSYASSSPPPAPYGFHP 120

Query: 121 NFM-------------GYGDSQPTTSLRWDPTHTFLETQHFGQPNMTGHLFNTHVQDSIH 179
           N M              YGDSQP  +  W+P++  LE+QHF +PN T H  +   +    
Sbjct: 121 NMMMNANNDQYERTTIRYGDSQPHRAPSWNPSYGILESQHFVEPNTTRHFLHEDQR---- 180

[Close]

BLAST of Carg10854 vs. TAIR 10
Match: AT2G20080.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-19
Identity = 69/180 (38.33%), Postives = 99/180 (55.00%), Query Frame = 0


Query: 1   MGSGYFGEMNMGNNNIDKRRSGSPSAAAAVATVVRRGRKGGGGEKPKQPQRGLGVAQLEK 60
           MGS +FG  N+  ++     S SP+++++ +   RRG+K  G EKPKQPQRGLGVAQLEK
Sbjct: 1   MGSTFFGRPNVVGSS---PPSSSPTSSSS-SPATRRGKK-NGSEKPKQPQRGLGVAQLEK 60

Query: 61  IRLHGEMGCAAYGHPYPNLSASDDMRIETASSSSPSYGFRQNFMGYGDSQPTTSLRWDPT 120
           IRLHGEM C ++    P+L               P  G  +      D     ++ W+P+
Sbjct: 61  IRLHGEMSCNSFNSYNPSL--------------YPQMGVHR------DQYDRATMSWNPS 120

Query: 121 HTFLETQHFGQPNMTGHLFNTHVQDSIHGNINVKYGGDSMRSSSQNSESSELDLELRLSI 180
           +  LE+QH  +PN+T H  N   +D        K  G  ++ S  +SE+ E+DLELRLS+
Sbjct: 121 YGILESQHSLEPNITRHFLN---EDPSSTTRRSKSLGSGIQHSG-SSENQEVDLELRLSL 151

The following BLAST results are available for this feature:

BLAST of Carg10854 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599460.1	1.7e-96	100.00	Protein SPEAR1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030438.1 Pr...	[more]
XP_022946617.1	1.4e-95	99.44	protein SPEAR1-like [Cucurbita moschata]	[more]
XP_023522169.1	3.7e-88	90.58	protein SPEAR1-like [Cucurbita pepo subsp. pepo] >XP_023547325.1 protein SPEAR1-...	[more]
XP_022999538.1	9.4e-84	90.56	protein SPEAR3-like isoform X2 [Cucurbita maxima]	[more]
XP_022999537.1	2.0e-81	85.79	protein SPEAR3-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg10854 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84X40	1.3e-24	41.71	Protein SPEAR1 OS=Arabidopsis thaliana OX=3702 GN=SPEAR1 PE=1 SV=1	[more]
Q6IDB0	6.7e-24	39.52	Protein SPEAR3 OS=Arabidopsis thaliana OX=3702 GN=SPEAR3 PE=1 SV=1	[more]

BLAST of Carg10854 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G472	6.8e-96	99.44	protein SPEAR1-like OS=Cucurbita moschata OX=3662 GN=LOC111450631 PE=4 SV=1	[more]
A0A6J1KJZ3	4.6e-84	90.56	protein SPEAR3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 ...	[more]
A0A6J1KB48	9.5e-82	85.79	protein SPEAR3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493868 PE=4 ...	[more]
A0A1S3C7M3	6.2e-65	71.77	protein SPEAR1 OS=Cucumis melo OX=3656 GN=LOC103497912 PE=4 SV=1	[more]
A0A0A0LFV0	5.3e-64	71.43	SPOROCYTELESS-like EAR-containing protein 1 OS=Cucumis sativus OX=3659 GN=SPEAR1...	[more]

BLAST of Carg10854 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20080.1	9.6e-26	41.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G28840.1	4.8e-25	39.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20080.2	1.3e-19	38.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..174
None	No IPR available	PANTHER	PTHR33388:SF18	PROTEIN SPEAR1	coord: 1..180
IPR040356	SPEAR family	PANTHER	PTHR33388	OS01G0212500 PROTEIN	coord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10854-RA	Carg10854-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity