Carg10842 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10842
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr05: 11835848 .. 11836477 (+)
RNA-Seq Expression	Carg10842
Synteny	Carg10842

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTGAGCCGATTCGGCCGGCAGTGAAGAAGAAGCTATGGAACGTGTTGAGAGCGGTTGTGTTCATGTTGAGGAAAGGGCTAAGCAAAAGCAAGATTGTGTTCGATCTTCATTTAATGCTCAAACGAAGCAAAATCGCAGGAAAAGCGATGGCAAATCTCGTGGAATTTCATCACGGATCTGCTTTCAGTTGCCAAACGATTGACATCGCCAATTCCTACATCTCAACGCGCGATTACGAATTCAGTTGCAGTAACAGTCCTGCGTATCCGTTCCGTTACTTCAACAAACATCGAAAACACCAAAACCGCCATTATTTCCCCAAATCTTACCGCTACGACGATTTCTCCACCGTTACGGCCGTCCAGAGAGTTCTTGATATTCTTCATAGCGATCAGAAATCTGAGGCGTCGCCGTTAGTGCCGTTACCTGGATTTGGAAAGAGTCCGCTAGTTGTACGGCAGTTGCGTGTTACAGATTCACCGTTTTCTCTCAAGGACGACAGTGACAGTCAGATCGTCGATAAAGCGGCCGAGGAATTCATCAAGAAGTTCTACACAGATCTACGGCTGGAGAAAAGCTTAGCAGCTTATGAATCGCCGTTTCGGAACACACTGTGCCGATGA

mRNA sequence

ATGGAAATTGAGCCGATTCGGCCGGCAGTGAAGAAGAAGCTATGGAACGTGTTGAGAGCGGTTGTGTTCATGTTGAGGAAAGGGCTAAGCAAAAGCAAGATTGTGTTCGATCTTCATTTAATGCTCAAACGAAGCAAAATCGCAGGAAAAGCGATGGCAAATCTCGTGGAATTTCATCACGGATCTGCTTTCAGTTGCCAAACGATTGACATCGCCAATTCCTACATCTCAACGCGCGATTACGAATTCAGTTGCAGTAACAGTCCTGCGTATCCGTTCCGTTACTTCAACAAACATCGAAAACACCAAAACCGCCATTATTTCCCCAAATCTTACCGCTACGACGATTTCTCCACCGTTACGGCCGTCCAGAGAGTTCTTGATATTCTTCATAGCGATCAGAAATCTGAGGCGTCGCCGTTAGTGCCGTTACCTGGATTTGGAAAGAGTCCGCTAGTTGTACGGCAGTTGCGTGTTACAGATTCACCGTTTTCTCTCAAGGACGACAGTGACAGTCAGATCGTCGATAAAGCGGCCGAGGAATTCATCAAGAAGTTCTACACAGATCTACGGCTGGAGAAAAGCTTAGCAGCTTATGAATCGCCGTTTCGGAACACACTGTGCCGATGA

Coding sequence (CDS)

ATGGAAATTGAGCCGATTCGGCCGGCAGTGAAGAAGAAGCTATGGAACGTGTTGAGAGCGGTTGTGTTCATGTTGAGGAAAGGGCTAAGCAAAAGCAAGATTGTGTTCGATCTTCATTTAATGCTCAAACGAAGCAAAATCGCAGGAAAAGCGATGGCAAATCTCGTGGAATTTCATCACGGATCTGCTTTCAGTTGCCAAACGATTGACATCGCCAATTCCTACATCTCAACGCGCGATTACGAATTCAGTTGCAGTAACAGTCCTGCGTATCCGTTCCGTTACTTCAACAAACATCGAAAACACCAAAACCGCCATTATTTCCCCAAATCTTACCGCTACGACGATTTCTCCACCGTTACGGCCGTCCAGAGAGTTCTTGATATTCTTCATAGCGATCAGAAATCTGAGGCGTCGCCGTTAGTGCCGTTACCTGGATTTGGAAAGAGTCCGCTAGTTGTACGGCAGTTGCGTGTTACAGATTCACCGTTTTCTCTCAAGGACGACAGTGACAGTCAGATCGTCGATAAAGCGGCCGAGGAATTCATCAAGAAGTTCTACACAGATCTACGGCTGGAGAAAAGCTTAGCAGCTTATGAATCGCCGTTTCGGAACACACTGTGCCGATGA

Protein sequence

MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHHGSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTVTAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKAAEEFIKKFYTDLRLEKSLAAYESPFRNTLCR

Homology

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BLAST of Carg10842 vs. NCBI nr
Match: XP_023545626.1 (uncharacterized protein LOC111805003 [Cucurbita pepo subsp. pepo] >KAG6599473.1 hypothetical protein SDJN03_09251, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030450.1 hypothetical protein SDJN02_08797, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415.2 bits (1066), Expect = 3.3e-112
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH
Sbjct: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTV 120
           GSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTV
Sbjct: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTV 120

Query: 121 TAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKAAE 180
           TAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKAAE
Sbjct: 121 TAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKAAE 180

Query: 181 EFIKKFYTDLRLEKSLAAYESPFRNTLCR 210
           EFIKKFYTDLRLEKSLAAYESPFRNTLCR
Sbjct: 181 EFIKKFYTDLRLEKSLAAYESPFRNTLCR 209

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BLAST of Carg10842 vs. NCBI nr
Match: XP_022998953.1 (uncharacterized protein LOC111493479 [Cucurbita maxima])

HSP 1 Score: 413.3 bits (1061), Expect = 1.2e-111
Identity = 207/209 (99.04%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           MEIEPIRPAVKKKLWNVLRAVVFMLRKGL+KSKIVFDLHLMLKRSK+AGKAMANLVEFHH
Sbjct: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLNKSKIVFDLHLMLKRSKLAGKAMANLVEFHH 60

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTV 120
           GSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTV
Sbjct: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTV 120

Query: 121 TAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKAAE 180
           TAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKAAE
Sbjct: 121 TAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKAAE 180

Query: 181 EFIKKFYTDLRLEKSLAAYESPFRNTLCR 210
           EFIKKFYTDLRLEKSLAAYESPFRNTLCR
Sbjct: 181 EFIKKFYTDLRLEKSLAAYESPFRNTLCR 209

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BLAST of Carg10842 vs. NCBI nr
Match: XP_008458717.1 (PREDICTED: uncharacterized protein LOC103498040 [Cucumis melo] >KAA0061533.1 uncharacterized protein E6C27_scaffold41G00940 [Cucumis melo var. makuwa] >TYK10740.1 uncharacterized protein E5676_scaffold332G00510 [Cucumis melo var. makuwa])

HSP 1 Score: 379.0 bits (972), Expect = 2.6e-101
Identity = 194/212 (91.51%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           ME+EPIRPAVKKKLWNVLRAVVFMLRKGLSKSKI FDLHLMLKRSKIAGKA+ANLVEFHH
Sbjct: 1   MEMEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKITFDLHLMLKRSKIAGKAIANLVEFHH 60

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSP---AYPFRYFNKHRKHQNRHYFPKSYRYDDF 120
           GSAFSCQTIDIANSYISTRDYEFSCSNSP   AYPFRYFNK  K + +HYFPKSYRYDDF
Sbjct: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPANTAYPFRYFNK--KLRKQHYFPKSYRYDDF 120

Query: 121 STVTAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDK 180
           STVTAVQRVLDILH+DQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDD DSQ+VDK
Sbjct: 121 STVTAVQRVLDILHTDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDGDSQLVDK 180

Query: 181 AAEEFIKKFYTDLRLEKSLAAYESPFRNTLCR 210
           AAEEFIKKFYTDLRLE+SLAA+ESP+RNTLCR
Sbjct: 181 AAEEFIKKFYTDLRLERSLAAFESPYRNTLCR 210

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BLAST of Carg10842 vs. NCBI nr
Match: XP_004150847.2 (uncharacterized protein LOC101210555 [Cucumis sativus] >KGN60589.1 hypothetical protein Csa_019428 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 4.4e-101
Identity = 194/212 (91.51%), Postives = 202/212 (95.28%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           ME+EPIRPAVKKKLWNVLRAVVFMLRKGLSKSKI FDLHLMLKRSKIAGKA+ANLVEFHH
Sbjct: 1   MEMEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKITFDLHLMLKRSKIAGKAIANLVEFHH 60

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSP---AYPFRYFNKHRKHQNRHYFPKSYRYDDF 120
           GSAFSCQTIDIANSYISTRDYEFSCSNSP   AYPFRYFNK  K + +HYFPKSYRYDDF
Sbjct: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPANTAYPFRYFNK--KLRKQHYFPKSYRYDDF 120

Query: 121 STVTAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDK 180
           STVTAVQRVLDILH+DQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDD DSQ VDK
Sbjct: 121 STVTAVQRVLDILHTDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDGDSQFVDK 180

Query: 181 AAEEFIKKFYTDLRLEKSLAAYESPFRNTLCR 210
           AAEEFIKKFYTDLRLE+SLAA+ESP+RNTLCR
Sbjct: 181 AAEEFIKKFYTDLRLERSLAAFESPYRNTLCR 210

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BLAST of Carg10842 vs. NCBI nr
Match: XP_038877425.1 (uncharacterized protein LOC120069707 [Benincasa hispida])

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-99
Identity = 192/211 (91.00%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           ME+EPIRPAVKKKLWNVLRAVVFMLRKGLSKSKI FDLHLMLKRSKIAGKA+ANLVEFHH
Sbjct: 1   MEMEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIAFDLHLMLKRSKIAGKAIANLVEFHH 60

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSP--AYPFRYFNKHRKHQNRHYFPKSYRYDDFS 120
           GSAFSCQTIDIANSYISTRDYEFSCSNSP  AYPFRYFNK  K + +HYFPKSYRYDDFS
Sbjct: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPATAYPFRYFNK--KLRKQHYFPKSYRYDDFS 120

Query: 121 TVTAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKA 180
           TVTAVQRVLDILH+DQKSEASPLV LPGFGKSPLVVRQLRVTDSPFSLKDD DSQ VDKA
Sbjct: 121 TVTAVQRVLDILHTDQKSEASPLVSLPGFGKSPLVVRQLRVTDSPFSLKDDGDSQFVDKA 180

Query: 181 AEEFIKKFYTDLRLEKSLAAYESPFRNTLCR 210
           AEEFIKKFYTDLRLE+S AA+ESP+RNTLCR
Sbjct: 181 AEEFIKKFYTDLRLERSSAAFESPYRNTLCR 209

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BLAST of Carg10842 vs. ExPASy TrEMBL
Match: A0A6J1KI86 (uncharacterized protein LOC111493479 OS=Cucurbita maxima OX=3661 GN=LOC111493479 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.0e-112
Identity = 207/209 (99.04%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           MEIEPIRPAVKKKLWNVLRAVVFMLRKGL+KSKIVFDLHLMLKRSK+AGKAMANLVEFHH
Sbjct: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLNKSKIVFDLHLMLKRSKLAGKAMANLVEFHH 60

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTV 120
           GSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTV
Sbjct: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTV 120

Query: 121 TAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKAAE 180
           TAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKAAE
Sbjct: 121 TAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKAAE 180

Query: 181 EFIKKFYTDLRLEKSLAAYESPFRNTLCR 210
           EFIKKFYTDLRLEKSLAAYESPFRNTLCR
Sbjct: 181 EFIKKFYTDLRLEKSLAAYESPFRNTLCR 209

[Close]

BLAST of Carg10842 vs. ExPASy TrEMBL
Match: A0A5A7V077 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00510 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 194/212 (91.51%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           ME+EPIRPAVKKKLWNVLRAVVFMLRKGLSKSKI FDLHLMLKRSKIAGKA+ANLVEFHH
Sbjct: 1   MEMEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKITFDLHLMLKRSKIAGKAIANLVEFHH 60

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSP---AYPFRYFNKHRKHQNRHYFPKSYRYDDF 120
           GSAFSCQTIDIANSYISTRDYEFSCSNSP   AYPFRYFNK  K + +HYFPKSYRYDDF
Sbjct: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPANTAYPFRYFNK--KLRKQHYFPKSYRYDDF 120

Query: 121 STVTAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDK 180
           STVTAVQRVLDILH+DQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDD DSQ+VDK
Sbjct: 121 STVTAVQRVLDILHTDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDGDSQLVDK 180

Query: 181 AAEEFIKKFYTDLRLEKSLAAYESPFRNTLCR 210
           AAEEFIKKFYTDLRLE+SLAA+ESP+RNTLCR
Sbjct: 181 AAEEFIKKFYTDLRLERSLAAFESPYRNTLCR 210

[Close]

BLAST of Carg10842 vs. ExPASy TrEMBL
Match: A0A1S3C8H8 (uncharacterized protein LOC103498040 OS=Cucumis melo OX=3656 GN=LOC103498040 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 194/212 (91.51%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           ME+EPIRPAVKKKLWNVLRAVVFMLRKGLSKSKI FDLHLMLKRSKIAGKA+ANLVEFHH
Sbjct: 1   MEMEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKITFDLHLMLKRSKIAGKAIANLVEFHH 60

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSP---AYPFRYFNKHRKHQNRHYFPKSYRYDDF 120
           GSAFSCQTIDIANSYISTRDYEFSCSNSP   AYPFRYFNK  K + +HYFPKSYRYDDF
Sbjct: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPANTAYPFRYFNK--KLRKQHYFPKSYRYDDF 120

Query: 121 STVTAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDK 180
           STVTAVQRVLDILH+DQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDD DSQ+VDK
Sbjct: 121 STVTAVQRVLDILHTDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDGDSQLVDK 180

Query: 181 AAEEFIKKFYTDLRLEKSLAAYESPFRNTLCR 210
           AAEEFIKKFYTDLRLE+SLAA+ESP+RNTLCR
Sbjct: 181 AAEEFIKKFYTDLRLERSLAAFESPYRNTLCR 210

[Close]

BLAST of Carg10842 vs. ExPASy TrEMBL
Match: A0A0A0LHW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000960 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.1e-101
Identity = 194/212 (91.51%), Postives = 202/212 (95.28%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           ME+EPIRPAVKKKLWNVLRAVVFMLRKGLSKSKI FDLHLMLKRSKIAGKA+ANLVEFHH
Sbjct: 1   MEMEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKITFDLHLMLKRSKIAGKAIANLVEFHH 60

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSP---AYPFRYFNKHRKHQNRHYFPKSYRYDDF 120
           GSAFSCQTIDIANSYISTRDYEFSCSNSP   AYPFRYFNK  K + +HYFPKSYRYDDF
Sbjct: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPANTAYPFRYFNK--KLRKQHYFPKSYRYDDF 120

Query: 121 STVTAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDK 180
           STVTAVQRVLDILH+DQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDD DSQ VDK
Sbjct: 121 STVTAVQRVLDILHTDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDGDSQFVDK 180

Query: 181 AAEEFIKKFYTDLRLEKSLAAYESPFRNTLCR 210
           AAEEFIKKFYTDLRLE+SLAA+ESP+RNTLCR
Sbjct: 181 AAEEFIKKFYTDLRLERSLAAFESPYRNTLCR 210

[Close]

BLAST of Carg10842 vs. ExPASy TrEMBL
Match: A0A6J1DPK7 (uncharacterized protein LOC111021911 OS=Momordica charantia OX=3673 GN=LOC111021911 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.4e-99
Identity = 188/211 (89.10%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           MEIE  RPAVKKKLWNV+RA+VFMLRKGLSKSKIV DLHLM+K+SKI GKA+ANLVEFHH
Sbjct: 4   MEIEANRPAVKKKLWNVVRAIVFMLRKGLSKSKIVLDLHLMIKQSKIVGKAIANLVEFHH 63

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNS--PAYPFRYFNKHRKHQNRHYFPKSYRYDDFS 120
           GSAFSCQTIDIANSYISTRDYEFSCSNS  PAYPFRYFNK RKHQN HYF KSYRYDDFS
Sbjct: 64  GSAFSCQTIDIANSYISTRDYEFSCSNSPAPAYPFRYFNKLRKHQNHHYFSKSYRYDDFS 123

Query: 121 TVTAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSDSQIVDKA 180
           TVTAV RVLDILHSDQKSEASPLVPLPGFGKSP  VRQLRVTDSPFSLKDD DSQ VDKA
Sbjct: 124 TVTAVHRVLDILHSDQKSEASPLVPLPGFGKSPRSVRQLRVTDSPFSLKDDGDSQFVDKA 183

Query: 181 AEEFIKKFYTDLRLEKSLAAYESPFRNTLCR 210
           AEEFIKKFYTDLRLE+SLA +ESP+RNTLCR
Sbjct: 184 AEEFIKKFYTDLRLERSLATFESPYRNTLCR 214

[Close]

BLAST of Carg10842 vs. TAIR 10
Match: AT1G52140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-23
Identity = 77/205 (37.56%), Postives = 115/205 (56.10%), Query Frame = 0


Query: 10  VKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHHGSAFSCQTI 69
           + KKLWN++R +++M+RKG+SK+K++ D +  LKR K            H GS  S    
Sbjct: 7   ISKKLWNIVRFLLYMIRKGVSKNKLIADFNATLKRGK--NLMFHQRRRVHAGSTASAALN 66

Query: 70  DIANSYISTRDYEFSCSNSPAYPFRY----FNKHRKHQNRHYFPKSYRYDDFSTVTAVQR 129
             + +  S ++YEFSCSN+P Y F +    F + + H N     ++ +  D   V A + 
Sbjct: 67  ATSATASSRQEYEFSCSNTPNYSFPFSNMAFMRKKSHNNLFTCGQTPQTLD-DDVAAARA 126

Query: 130 VLDILHS-DQKSEASP------LVP-LPGFGKSPLVVRQLRVTDSPFSL---KDDSDSQI 189
           VL++L+   +K   +P      L P  PGFG++PL VR LRVTDSPF L     D  +  
Sbjct: 127 VLELLNGVGEKGNVTPADLTVALSPYFPGFGQTPL-VRPLRVTDSPFPLTPENGDVANGH 186

Query: 190 VDKAAEEFIKKFYTDLRLEKSLAAY 200
           VDKAA++FIKKFY +L  +K +  +
Sbjct: 187 VDKAADDFIKKFYKNLNQQKKMIEF 207

[Close]

BLAST of Carg10842 vs. TAIR 10
Match: AT4G29110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 99.8 bits (247), Expect = 2.8e-21
Identity = 79/214 (36.92%), Postives = 118/214 (55.14%), Query Frame = 0


Query: 1   MEIEPIRPAVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH 60
           ME+E       K+LW V+R V  +L+ G  K+K++ DL+LMLKR     KA+ NL     
Sbjct: 12  MEMEQNAQVAAKRLWKVVRIVFCVLKTGTVKNKLMLDLNLMLKR---GNKAITNL----R 71

Query: 61  GSAFSCQTIDIANSYISTRDYEFSCSNSPAYPFRYFNKHRKHQNRHYFPKSYRYDDFSTV 120
             + S  + D+++S    RDY+         PF + +K ++  +       Y  ++ +  
Sbjct: 72  RRSSSTGSHDVSSS-SRVRDYD---------PFAFISKRKRRVH-----GGYDNEEDAVE 131

Query: 121 TAVQRVLDIL-HSDQKSEA------SPLVPLPGFGKSPLVVRQLRVTDSPFSLKDDSD-S 180
            AV++V ++L  +D+K+ A      SPL+  P        VRQLRVTDSPF L D  D  
Sbjct: 132 AAVKKVFELLGENDKKTVATESARESPLIMSP-------AVRQLRVTDSPFPLDDGGDHD 191

Query: 181 QIVDKAAEEFIKKFYTDLRLEKSLA-AYESPFRN 206
            +VDKAAEEFIKKFY +L+L+K +  A ESP+ +
Sbjct: 192 HVVDKAAEEFIKKFYKNLKLQKKMTNALESPYHD 196

[Close]

BLAST of Carg10842 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.9 bits (237), Expect = 4.1e-20
Identity = 81/211 (38.39%), Postives = 113/211 (53.55%), Query Frame = 0


Query: 9   AVKKKLWNVLRAVVFMLRKGLSKSKIVFDLHLMLKRSKIAGKAMANLVEFHH-----GSA 68
           ++ KKL N++R V++ML KG+SK K++ D +  LKR K       NL+ FH+     GSA
Sbjct: 6   SISKKLGNIVRFVLYMLHKGISKQKLLADFNATLKRGK-------NLM-FHNRRRVPGSA 65

Query: 69  FSCQTIDIANSYISTRDYEFSCSNSPAY--PFRYFNKHRKHQNRHYFPKSYRYDDFSTVT 128
            +              +YEFSCS++P Y  PF      +K  +   F            T
Sbjct: 66  VASH---------PQNEYEFSCSDTPNYTFPFNMAAFKKKSHHNSLFSCGQAPPTLDDDT 125

Query: 129 AVQR-VLDILHS----DQKSEA--------SPLVP-LPGFGKSPLVVRQLRVTDSPFSLK 188
           +V R VL++L+S    DQ S          + L P LPGFG+S   VR LRVTDSPF L+
Sbjct: 126 SVSRAVLELLNSGGDHDQGSNTPAFSIEALTALSPYLPGFGRSTSSVRPLRVTDSPFPLR 185

Query: 189 DDSD--SQIVDKAAEEFIKKFYTDLRLEKSL 197
           ++ D  +  VDKAA+EFIKKFY +L  +K +
Sbjct: 186 EEGDVANGHVDKAADEFIKKFYKNLYQQKKM 199

[Close]

BLAST of Carg10842 vs. TAIR 10
Match: AT4G32860.1 (unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 9.8e-06
Identity = 59/216 (27.31%), Postives = 96/216 (44.44%), Query Frame = 0


Query: 2   EIEPIRPAVKKKLWNVLRAVVFMLRK--GLSKSKIV--FDLHLMLKRSKIAGKAMANLVE 61
           ++E       KKL ++ + ++F ++K    S+ K++   D HL+ KR KI  K++   V 
Sbjct: 6   DMEVCSTVTTKKLSSLAKLILFTIQKVSDASRHKLLTTLDPHLLAKRGKILRKSLNEAVS 65

Query: 62  FHHGSAFSCQTI---DIANSYIS----TRDYEFSCSNSPAYPFRYF----NKHRKHQNRH 121
             H S  +C+     D+ +S+IS      +YEFSCS++P  P R +    +K R+    H
Sbjct: 66  TSH-SRITCRPSDHQDVRSSFISPVPLQLEYEFSCSSTP--PRRSYATTVSKGRRSNGSH 125

Query: 122 YFP--KSYRYDDFSTVTAVQRVLDILHSDQKSEASPLVPLPGFGKSPLVVRQLRVTDSPF 181
             P     +   +     + +V D +     + A                    V     
Sbjct: 126 NRPLINKRQRQAYIRYNTLPKVRDSIWDRHVAAA--------------------VFPDVA 185

Query: 182 SLKDDSDSQIVDKAAEEFIKKFYTDLRLEKSLAAYE 201
           S     +S  VD+AAEEFI+ FY  LRL+K + A E
Sbjct: 186 SSTGTMESCHVDRAAEEFIQSFYRQLRLQKWMMAQE 198

The following BLAST results are available for this feature:

BLAST of Carg10842 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545626.1	3.3e-112	100.00	uncharacterized protein LOC111805003 [Cucurbita pepo subsp. pepo] >KAG6599473.1 ...	[more]
XP_022998953.1	1.2e-111	99.04	uncharacterized protein LOC111493479 [Cucurbita maxima]	[more]
XP_008458717.1	2.6e-101	91.51	PREDICTED: uncharacterized protein LOC103498040 [Cucumis melo] >KAA0061533.1 unc...	[more]
XP_004150847.2	4.4e-101	91.51	uncharacterized protein LOC101210555 [Cucumis sativus] >KGN60589.1 hypothetical ...	[more]
XP_038877425.1	1.4e-99	91.00	uncharacterized protein LOC120069707 [Benincasa hispida]	[more]

BLAST of Carg10842 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg10842 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KI86	6.0e-112	99.04	uncharacterized protein LOC111493479 OS=Cucurbita maxima OX=3661 GN=LOC111493479...	[more]
A0A5A7V077	1.3e-101	91.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C8H8	1.3e-101	91.51	uncharacterized protein LOC103498040 OS=Cucumis melo OX=3656 GN=LOC103498040 PE=...	[more]
A0A0A0LHW0	2.1e-101	91.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000960 PE=4 SV=1	[more]
A0A6J1DPK7	3.4e-99	89.10	uncharacterized protein LOC111021911 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]

BLAST of Carg10842 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52140.1	2.3e-23	37.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G29110.1	2.8e-21	36.92	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT3G16330.1	4.1e-20	38.39	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G32860.1	9.8e-06	27.31	unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 175..194 e-value: 3.7E-7 score: 29.6
None	No IPR available	PANTHER	PTHR33265:SF26	AVR9/CF-9 RAPIDLY ELICITED PROTEIN	coord: 4..204
None	No IPR available	PANTHER	PTHR33265	AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED	coord: 4..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10842-RA	Carg10842-RA	mRNA