Carg10828 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10828
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Profilin
Location	Carg_Chr05: 11899911 .. 11901957 (-)
RNA-Seq Expression	Carg10828
Synteny	Carg10828

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAAAATAATTAATTAATTCCCGCCTTTCTCTCCTGCCCTATTTATTTCCATTTTAGTCGAAGACAAGGCGAAAGAACGAACCGAGCCTCATCCTTTACCGGAAGAACTTCAAGAGAAAGCTCAGCAATCTGCGAAGAACAAACGCGATCACCGATCCAATTTCCATATCAAAATGTCGTGGCAAACATATGTCGATGACCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACCGCCGCTGCCATTATAGGCCACGATGGCAGCGTCTGGGCTCAGAGCACCTCATTTCCTCAGGTTTGGATCTGATTTTTCAAGTTTTGTATTCGTTTTCAACTTGTGGATTGGATGTTTTAGCATTAGTGCAGTTTAGGGCGTTAATTCGGCATTTCGTATGTGGATTACACGCGTTTGTTTGTTTTTCATATGTATCGTGATATTTGATCGTATTGAGGAAAGATAGGTTTAGCCATTGGTTATGTGTAAATGCTGATTTGTTCGTATTGTCCGTTTATTCGACTGGTTGTCTATTGATTGATTTTTGGATGTTTCGTGGTAATTATCTGGTTGTTGCTCGATAGAGCTAGAGCTTAAATTTTGATGGAGAGGTAACTTAAGCTATTCAAGTCTTGTTCTCTCTCTGGTAATGGAAATTGTGTCACTAATAGGGTGGAAAATGGTTGAATCGTTGTCATAATTGTTTTTATCAATGTGTATTCTAATTTAAATCATTAAATGTTGATTCCAAGAGGATTCTGATTGATTCCTTTTGTCGTTGAGTTCATTTATGGGATGGATTAATGGTTCTGATTCATGTGTAATAACTAAAGGTTGATTCCAAGAGGATTCTAGTTGAGTTTCTCATCACGAATTCTTAATTGTAGTGCAAGCCTGAGGAGATCACTGGTATCATGAAGGATTTTGATGAACCTGGTTATCTTGCACCTACTGGATTACACCTTGCAGGTACAAAGTACATGGTTATCCAAGGCGAGCCTGGAGCAGTCATCCGTGGAAAGAAGGTAGTACTTACATTACATAACTCAATAACATAATAAGATCTTTCGTCAAGTAATAATAACTATTAGACACCGAATTTTGAAATGTTCAGAAGTGACTGCTAAAACTTAATCAATTGATCTTCGTCTAAAGAAATATCCTTTGATCTTGGAAAATTATTGCTGCCTCTTATTTTCTTGAGGCCAGAGGTTCAAATTCTCATTATGATATCAAATGGTACGAGTTTAGCATAGTTTTTGGTTTGTACACATCACATATTAAATGATTTCTATTATGATTGTATCATGAGAATGATAGCTATGTTGTGATGAGCATGGTGGAGTATATCAATCTATGGATTAAAGTCCGTTAAATTTCTATTGTGTTGGATTGTTGTGACAGGGCTCTGGAGGAATTACCATAAAGAAATCTCAACTGTTTTTTGGATTATTGATTATTCCTCTGTTTCATTTGTCCATAAGGTTCTCTTTTGAAATGGTCAAAAGTGATTGCTAAAACTTGATCAATTGATTTTCTTCTAAAGAAATATCATTTGATCCTGGAAATTTATAGCTGCCAACTATTTTCTTGAGGCTGGAGGTTCAAATTCTCATTATGATTTCACATTTATATCAAATGTTATGAGTTATAGCATAGTTTTTGGCTTGAACACATTACATATTAAATGATTTCTATTATGATTGTATCATCAGAATGATAGCTATGTTGTGATAAACATGGTGGAGTATATCAATCTATGGATTAAAGTCCGTTAAAATTCTCTTGTGTTGGATTGTTGTGACAGGGGTCTGGAGGAATTACCATAAAGAAGACTGGGCAAGCTCTAGTTTTTGGCATTTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTTGGCGATTACCTCGTCGATCAGGGTCTGTAGGCTTTCTAAGTATCGAAATTTTGGCCTACAATTATTCTTTTTCCTTGTTTCTTTTTGTGTTTGTTTGGTTCCAAGTTTGCATATGCTTCATTCTTGAGCCTC

mRNA sequence

ATAAAAATAATTAATTAATTCCCGCCTTTCTCTCCTGCCCTATTTATTTCCATTTTAGTCGAAGACAAGGCGAAAGAACGAACCGAGCCTCATCCTTTACCGGAAGAACTTCAAGAGAAAGCTCAGCAATCTGCGAAGAACAAACGCGATCACCGATCCAATTTCCATATCAAAATGTCGTGGCAAACATATGTCGATGACCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACCGCCGCTGCCATTATAGGCCACGATGGCAGCGTCTGGGCTCAGAGCACCTCATTTCCTCAGTGCAAGCCTGAGGAGATCACTGGTATCATGAAGGATTTTGATGAACCTGGTTATCTTGCACCTACTGGATTACACCTTGCAGGTACAAAGTACATGGTTATCCAAGGCGAGCCTGGAGCAGTCATCCGTGGAAAGAAGGGGTCTGGAGGAATTACCATAAAGAAGACTGGGCAAGCTCTAGTTTTTGGCATTTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTTGGCGATTACCTCGTCGATCAGGGTCTGTAGGCTTTCTAAGTATCGAAATTTTGGCCTACAATTATTCTTTTTCCTTGTTTCTTTTTGTGTTTGTTTGGTTCCAAGTTTGCATATGCTTCATTCTTGAGCCTC

Coding sequence (CDS)

ATGTCGTGGCAAACATATGTCGATGACCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACCGCCGCTGCCATTATAGGCCACGATGGCAGCGTCTGGGCTCAGAGCACCTCATTTCCTCAGTGCAAGCCTGAGGAGATCACTGGTATCATGAAGGATTTTGATGAACCTGGTTATCTTGCACCTACTGGATTACACCTTGCAGGTACAAAGTACATGGTTATCCAAGGCGAGCCTGGAGCAGTCATCCGTGGAAAGAAGGGGTCTGGAGGAATTACCATAAAGAAGACTGGGCAAGCTCTAGTTTTTGGCATTTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTTGGCGATTACCTCGTCGATCAGGGTCTGTAG

Protein sequence

MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPGYLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGL

Homology

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BLAST of Carg10828 vs. NCBI nr
Match: XP_022946036.1 (profilin-4 [Cucurbita moschata] >XP_022999542.1 profilin-4 [Cucurbita maxima] >KAG6599488.1 hypothetical protein SDJN03_09266, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030464.1 hypothetical protein SDJN02_08811 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.4 bits (729), Expect = 2.5e-73
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLVDQGL
Sbjct: 121 VERLGDYLVDQGL 133

[Close]

BLAST of Carg10828 vs. NCBI nr
Match: XP_023547012.1 (profilin-4 [Cucurbita pepo subsp. pepo] >XP_023547256.1 profilin-4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.2 bits (718), Expect = 4.7e-72
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQ KPEEITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQYKPEEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLVDQGL
Sbjct: 121 VERLGDYLVDQGL 133

[Close]

BLAST of Carg10828 vs. NCBI nr
Match: KAG7021308.1 (hypothetical protein SDJN02_17997 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 277.7 bits (709), Expect = 5.2e-71
Identity = 127/133 (95.49%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQS +FPQCKP+EITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSAAFPQCKPQEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGLH+AGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFG+YEEPVTPGQCNMV
Sbjct: 61  HLAPTGLHIAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGLYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLVDQGL
Sbjct: 121 VERLGDYLVDQGL 133

[Close]

BLAST of Carg10828 vs. NCBI nr
Match: XP_022937497.1 (profilin [Cucurbita moschata] >XP_022966003.1 profilin [Cucurbita maxima] >XP_023538010.1 profilin [Cucurbita pepo subsp. pepo] >KAG6586453.1 hypothetical protein SDJN03_19186, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 277.7 bits (709), Expect = 5.2e-71
Identity = 127/133 (95.49%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQS +FPQCKP+EITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSAAFPQCKPQEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGLH+AGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFG+YEEPVTPGQCNMV
Sbjct: 61  HLAPTGLHIAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGLYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLVDQGL
Sbjct: 121 VERLGDYLVDQGL 133

[Close]

BLAST of Carg10828 vs. NCBI nr
Match: XP_022154694.1 (profilin-4 [Momordica charantia])

HSP 1 Score: 273.5 bits (698), Expect = 9.8e-70
Identity = 126/133 (94.74%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHLTA+AI+GHDGSVWAQS+SFPQ KP+EITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGLHL GTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  HLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLVDQGL
Sbjct: 121 VERLGDYLVDQGL 133

[Close]

BLAST of Carg10828 vs. ExPASy Swiss-Prot
Match: A4KA45 (Profilin-4 OS=Corylus avellana OX=13451 PE=1 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 4.6e-70
Identity = 122/133 (91.73%), Postives = 128/133 (96.24%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVD+HLMCDIDGQGQ L A+AI+GHDGSVWAQS+SFPQ KPEEITGIMKDFDEPG
Sbjct: 1   MSWQTYVDEHLMCDIDGQGQQLAASAIVGHDGSVWAQSSSFPQLKPEEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGLHL GTKYMVIQGE GAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  HLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYL+DQGL
Sbjct: 121 VERLGDYLIDQGL 133

[Close]

BLAST of Carg10828 vs. ExPASy Swiss-Prot
Match: O49894 (Profilin OS=Mercurialis annua OX=3986 PE=1 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 4.6e-70
Identity = 120/133 (90.23%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHL AA+I+GHDGS+WAQS SFPQ KPEEITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLAAASIVGHDGSIWAQSASFPQLKPEEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGL++AGTKYMVIQGE GAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  HLAPTGLYIAGTKYMVIQGESGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYL++QG+
Sbjct: 121 VERLGDYLIEQGM 133

[Close]

BLAST of Carg10828 vs. ExPASy Swiss-Prot
Match: A4KA44 (Profilin-3 OS=Corylus avellana OX=13451 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 3.9e-69
Identity = 121/133 (90.98%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQ YVD+HLMCDIDGQGQ L A+AI+GHDGSVWAQS+SFPQ KPEEITGIMKDFDEPG
Sbjct: 1   MSWQAYVDEHLMCDIDGQGQQLAASAIVGHDGSVWAQSSSFPQLKPEEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGLHL GTKYMVIQGE GAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  HLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLV+QGL
Sbjct: 121 VERLGDYLVEQGL 133

[Close]

BLAST of Carg10828 vs. ExPASy Swiss-Prot
Match: A4KA39 (Profilin-1 OS=Corylus avellana OX=13451 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 8.6e-69
Identity = 120/133 (90.23%), Postives = 127/133 (95.49%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQ YVD+HLMCDIDGQGQ L A+AI+GHDGSVWAQS+SFPQ KPEEITGIMKDFDEPG
Sbjct: 1   MSWQAYVDEHLMCDIDGQGQQLAASAIVGHDGSVWAQSSSFPQLKPEEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGLHL GTKYMVIQGE GAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  HLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYL++QGL
Sbjct: 121 VERLGDYLLEQGL 133

[Close]

BLAST of Carg10828 vs. ExPASy Swiss-Prot
Match: A4KA40 (Profilin-2 OS=Corylus avellana OX=13451 PE=1 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-68
Identity = 120/133 (90.23%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQ YVD+HLMCDIDGQGQ L A+AI+GHDGSVWAQS+SFPQ KPEEITGIMKDFDEPG
Sbjct: 1   MSWQAYVDEHLMCDIDGQGQQLAASAIVGHDGSVWAQSSSFPQLKPEEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGLHL GTKYMVIQGE GAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  HLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYL +QGL
Sbjct: 121 VERLGDYLAEQGL 133

[Close]

BLAST of Carg10828 vs. ExPASy TrEMBL
Match: A0A6J1KB52 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493871 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.2e-73
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLVDQGL
Sbjct: 121 VERLGDYLVDQGL 133

[Close]

BLAST of Carg10828 vs. ExPASy TrEMBL
Match: A0A6J1G2J8 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450246 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.2e-73
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLVDQGL
Sbjct: 121 VERLGDYLVDQGL 133

[Close]

BLAST of Carg10828 vs. ExPASy TrEMBL
Match: A0A6J1HQL6 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111465721 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.5e-71
Identity = 127/133 (95.49%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQS +FPQCKP+EITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSAAFPQCKPQEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGLH+AGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFG+YEEPVTPGQCNMV
Sbjct: 61  HLAPTGLHIAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGLYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLVDQGL
Sbjct: 121 VERLGDYLVDQGL 133

[Close]

BLAST of Carg10828 vs. ExPASy TrEMBL
Match: A0A6J1FBD0 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111443889 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.5e-71
Identity = 127/133 (95.49%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQS +FPQCKP+EITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSAAFPQCKPQEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGLH+AGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFG+YEEPVTPGQCNMV
Sbjct: 61  HLAPTGLHIAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGLYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLVDQGL
Sbjct: 121 VERLGDYLVDQGL 133

[Close]

BLAST of Carg10828 vs. ExPASy TrEMBL
Match: A0A6J1DMX1 (Profilin OS=Momordica charantia OX=3673 GN=LOC111021890 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.7e-70
Identity = 126/133 (94.74%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCDIDGQGQHLTA+AI+GHDGSVWAQS+SFPQ KP+EITGIMKDFDEPG
Sbjct: 1   MSWQTYVDDHLMCDIDGQGQHLTASAIVGHDGSVWAQSSSFPQFKPQEITGIMKDFDEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGLHL GTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV
Sbjct: 61  HLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYLVDQGL
Sbjct: 121 VERLGDYLVDQGL 133

[Close]

BLAST of Carg10828 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 247.3 bits (630), Expect = 7.0e-66
Identity = 113/134 (84.33%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDI-DGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEP 60
           MSWQ YVD+HLMCD+ DGQG HLTAAAIIGHDGSVWAQS +FPQ KP+EIT IMKDFDEP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GYLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNM 120
           G+LAPTG+ LAG KYMVIQGEP AVIRGKKG+GGITIKKTGQ++VFG+YEEPVTPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 VVERLGDYLVDQGL 134
           VVERLGDYL++QGL
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of Carg10828 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 243.8 bits (621), Expect = 7.7e-65
Identity = 112/134 (83.58%), Postives = 124/134 (92.54%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDI-DGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEP 60
           MSWQTYVD+HLMCD+ DGQG HLTAAAI+GHDGSVWAQS +FPQ K +E + IMKDFDEP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GYLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNM 120
           G+LAPTGL +AG KYMVIQGEPGAVIRGKKG+GGITIKKTGQ+ VFGIYEEPVTPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 VVERLGDYLVDQGL 134
           VVERLGDYL++QGL
Sbjct: 121 VVERLGDYLLEQGL 134

[Close]

BLAST of Carg10828 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 220.3 bits (560), Expect = 9.2e-58
Identity = 101/133 (75.94%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQ+YVDDHLMCD+  +G HLTAAAI+G DGSVWAQS  FPQ KP+EI GI KDF+EPG
Sbjct: 1   MSWQSYVDDHLMCDV--EGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGL L G KYMVIQGE GAVIRGKKG GG+TIKKT QALVFG Y+EP+T GQCN+V
Sbjct: 61  FLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYL++  L
Sbjct: 121 VERLGDYLIESEL 131

[Close]

BLAST of Carg10828 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 215.7 bits (548), Expect = 2.3e-56
Identity = 101/133 (75.94%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQTYVDDHLMCD+   G  LTAAAI+G DGSVWAQS +FPQ KPEEI GI  DF  PG
Sbjct: 38  MSWQTYVDDHLMCDV--AGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPG 97

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
            LAPTGL L G KYMVIQGEP AVIRGKKG+GG+TIKKT  ALVFGIY+EP+TPGQCNMV
Sbjct: 98  TLAPTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMV 157

Query: 121 VERLGDYLVDQGL 134
           VE LG+YL++ GL
Sbjct: 158 VENLGEYLIESGL 168

[Close]

BLAST of Carg10828 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 215.3 bits (547), Expect = 2.9e-56
Identity = 99/133 (74.44%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSTSFPQCKPEEITGIMKDFDEPG 60
           MSWQ+YVDDHLMC++  +G HLT AAI G DGSVWAQS++FPQ KP EI GI KDF+E G
Sbjct: 1   MSWQSYVDDHLMCEV--EGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAG 60

Query: 61  YLAPTGLHLAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMV 120
           +LAPTGL L G KYMV+QGE GAVIRGKKG GG+TIKKT QALVFGIY+EP+T GQCN+V
Sbjct: 61  HLAPTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLV 120

Query: 121 VERLGDYLVDQGL 134
           VERLGDYL++ GL
Sbjct: 121 VERLGDYLIESGL 131

The following BLAST results are available for this feature:

BLAST of Carg10828 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946036.1	2.5e-73	100.00	profilin-4 [Cucurbita moschata] >XP_022999542.1 profilin-4 [Cucurbita maxima] >K...	[more]
XP_023547012.1	4.7e-72	99.25	profilin-4 [Cucurbita pepo subsp. pepo] >XP_023547256.1 profilin-4 [Cucurbita pe...	[more]
KAG7021308.1	5.2e-71	95.49	hypothetical protein SDJN02_17997 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022937497.1	5.2e-71	95.49	profilin [Cucurbita moschata] >XP_022966003.1 profilin [Cucurbita maxima] >XP_02...	[more]
XP_022154694.1	9.8e-70	94.74	profilin-4 [Momordica charantia]	[more]

BLAST of Carg10828 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4KA45	4.6e-70	91.73	Profilin-4 OS=Corylus avellana OX=13451 PE=1 SV=1	[more]
O49894	4.6e-70	90.23	Profilin OS=Mercurialis annua OX=3986 PE=1 SV=1	[more]
A4KA44	3.9e-69	90.98	Profilin-3 OS=Corylus avellana OX=13451 PE=1 SV=1	[more]
A4KA39	8.6e-69	90.23	Profilin-1 OS=Corylus avellana OX=13451 PE=1 SV=1	[more]
A4KA40	1.1e-68	90.23	Profilin-2 OS=Corylus avellana OX=13451 PE=1 SV=1	[more]

BLAST of Carg10828 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KB52	1.2e-73	100.00	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493871 PE=3 SV=1	[more]
A0A6J1G2J8	1.2e-73	100.00	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450246 PE=3 SV=1	[more]
A0A6J1HQL6	2.5e-71	95.49	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111465721 PE=3 SV=1	[more]
A0A6J1FBD0	2.5e-71	95.49	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111443889 PE=3 SV=1	[more]
A0A6J1DMX1	4.7e-70	94.74	Profilin OS=Momordica charantia OX=3673 GN=LOC111021890 PE=3 SV=1	[more]

BLAST of Carg10828 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19770.1	7.0e-66	84.33	profilin 5	[more]
AT4G29340.1	7.7e-65	83.58	profilin 4	[more]
AT2G19760.1	9.2e-58	75.94	profilin 1	[more]
AT5G56600.1	2.3e-56	75.94	profilin 3	[more]
AT4G29350.1	2.9e-56	74.44	profilin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 54..68 score: 80.73 coord: 73..82 score: 96.73 coord: 119..132 score: 83.64 coord: 29..42 score: 81.95 coord: 106..119 score: 87.01 coord: 1..14 score: 88.18 coord: 86..101 score: 87.05
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 66..80 score: 70.83 coord: 42..62 score: 58.33 coord: 3..12 score: 76.25 coord: 102..115 score: 66.43 coord: 115..132 score: 73.06 coord: 23..32 score: 72.25
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..133 e-value: 3.0E-62 score: 222.8
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..132 e-value: 1.5E-42 score: 144.8
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..133
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..132 e-value: 1.52387E-56 score: 170.199
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..133 e-value: 8.2E-59 score: 199.4
None	No IPR available	PANTHER	PTHR11604:SF37	PROFILIN	coord: 1..133
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10828-RA	Carg10828-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding