Carg10782 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10782
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	stress-response A/B barrel domain-containing protein UP3-like
Location	Carg_Chr05: 12099303 .. 12100076 (+)
RNA-Seq Expression	Carg10782
Synteny	Carg10782

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATCACTTGCACTCCGTACGATCTCCACTCTTCCTTCCAGTTCTAGGCATCTCCGCCTCCGCCCAAACCATCGCCCCTCCTTCAGGCCCTTCTCCGTCAACATGTCTACACACACTCCGCCAATCGAACACGTCGTCCTCTTCAAGGTTAAAGATGGCGTCGATTCCTCTAAGGTAAACGACATGCTCACTGGCCTCAATTCCTTAACCTCCCTCGAACAAGTCCTCCATCTCACCGCCGCCCCCGTCCTCCGCAACTGCTCCTCCGCCTCCAACTTCACTCACCTCCTTCATAGCCGCTACCCTTCCAAGGAGGATCTCTCCAGCTACTCCGCCCACTCCGCCCACGTGGATGTTGTCAAGCAATTTGTTCTTCCTATCTGCGATGACATCATGGCCGTCGATTGGGTCGCCGATGCTTTGCAAGGCCCCGTTGCCGCACCTCCTGGCTCTGCCCTTAGAATCACCTTCCTCAAACTCAAGGAGAATCTGGCGGAGGAAGTTAAGAACGAGATCTTGGAGGTCATCGCAGGTCTGAGGGAGAAATTGGGGCCCAATGTCCAGTTGACGGTGGGCGAGAACTTTTCCCCGGGCAGAGCCAAGGGGTATTCGATCGCTTCGATTGCCATTTTCCCGGGGCCGAAGGAGTTGGAAGCGGCATCTTCAGACCCAGAAATGGTTGAATTGCATAAAGAGAAGGTCAGGGAGCATTTGGAGAGTGTGATTGTGGTGGATTACGTGGTTCCGCCAGCGCAAACCGCGAGTCTCTAA

mRNA sequence

ATGCTATCACTTGCACTCCGTACGATCTCCACTCTTCCTTCCAGTTCTAGGCATCTCCGCCTCCGCCCAAACCATCGCCCCTCCTTCAGGCCCTTCTCCGTCAACATGTCTACACACACTCCGCCAATCGAACACGTCGTCCTCTTCAAGGTTAAAGATGGCGTCGATTCCTCTAAGGTAAACGACATGCTCACTGGCCTCAATTCCTTAACCTCCCTCGAACAAGTCCTCCATCTCACCGCCGCCCCCGTCCTCCGCAACTGCTCCTCCGCCTCCAACTTCACTCACCTCCTTCATAGCCGCTACCCTTCCAAGGAGGATCTCTCCAGCTACTCCGCCCACTCCGCCCACGTGGATGTTGTCAAGCAATTTGTTCTTCCTATCTGCGATGACATCATGGCCGTCGATTGGGTCGCCGATGCTTTGCAAGGCCCCGTTGCCGCACCTCCTGGCTCTGCCCTTAGAATCACCTTCCTCAAACTCAAGGAGAATCTGGCGGAGGAAGTTAAGAACGAGATCTTGGAGGTCATCGCAGGTCTGAGGGAGAAATTGGGGCCCAATGTCCAGTTGACGGTGGGCGAGAACTTTTCCCCGGGCAGAGCCAAGGGGTATTCGATCGCTTCGATTGCCATTTTCCCGGGGCCGAAGGAGTTGGAAGCGGCATCTTCAGACCCAGAAATGGTTGAATTGCATAAAGAGAAGGTCAGGGAGCATTTGGAGAGTGTGATTGTGGTGGATTACGTGGTTCCGCCAGCGCAAACCGCGAGTCTCTAA

Coding sequence (CDS)

ATGCTATCACTTGCACTCCGTACGATCTCCACTCTTCCTTCCAGTTCTAGGCATCTCCGCCTCCGCCCAAACCATCGCCCCTCCTTCAGGCCCTTCTCCGTCAACATGTCTACACACACTCCGCCAATCGAACACGTCGTCCTCTTCAAGGTTAAAGATGGCGTCGATTCCTCTAAGGTAAACGACATGCTCACTGGCCTCAATTCCTTAACCTCCCTCGAACAAGTCCTCCATCTCACCGCCGCCCCCGTCCTCCGCAACTGCTCCTCCGCCTCCAACTTCACTCACCTCCTTCATAGCCGCTACCCTTCCAAGGAGGATCTCTCCAGCTACTCCGCCCACTCCGCCCACGTGGATGTTGTCAAGCAATTTGTTCTTCCTATCTGCGATGACATCATGGCCGTCGATTGGGTCGCCGATGCTTTGCAAGGCCCCGTTGCCGCACCTCCTGGCTCTGCCCTTAGAATCACCTTCCTCAAACTCAAGGAGAATCTGGCGGAGGAAGTTAAGAACGAGATCTTGGAGGTCATCGCAGGTCTGAGGGAGAAATTGGGGCCCAATGTCCAGTTGACGGTGGGCGAGAACTTTTCCCCGGGCAGAGCCAAGGGGTATTCGATCGCTTCGATTGCCATTTTCCCGGGGCCGAAGGAGTTGGAAGCGGCATCTTCAGACCCAGAAATGGTTGAATTGCATAAAGAGAAGGTCAGGGAGCATTTGGAGAGTGTGATTGTGGTGGATTACGTGGTTCCGCCAGCGCAAACCGCGAGTCTCTAA

Protein sequence

MLSLALRTISTLPSSSRHLRLRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKVNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDVVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGLREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLESVIVVDYVVPPAQTASL

Homology

[Close]

BLAST of Carg10782 vs. NCBI nr
Match: XP_023521400.1 (stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo subsp. pepo] >XP_023546924.1 stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo subsp. pepo] >KAG6599531.1 Stress-response A/B barrel domain-containing protein UP3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030509.1 Stress-response A/B barrel domain-containing protein UP3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 496.9 bits (1278), Expect = 1.1e-136
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MLSLALRTISTLPSSSRHLRLRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV 60
           MLSLALRTISTLPSSSRHLRLRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV
Sbjct: 1   MLSLALRTISTLPSSSRHLRLRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV 60

Query: 61  NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV 120
           NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV
Sbjct: 61  NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV 120

Query: 121 VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL 180
           VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL
Sbjct: 121 VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL 180

Query: 181 REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE 240
           REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE
Sbjct: 181 REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE 240

Query: 241 SVIVVDYVVPPAQTASL 258
           SVIVVDYVVPPAQTASL
Sbjct: 241 SVIVVDYVVPPAQTASL 257

[Close]

BLAST of Carg10782 vs. NCBI nr
Match: XP_022946739.1 (stress-response A/B barrel domain-containing protein UP3-like [Cucurbita moschata])

HSP 1 Score: 491.5 bits (1264), Expect = 4.4e-135
Identity = 255/257 (99.22%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MLSLALRTISTLPSSSRHLRLRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV 60
           MLSLALRTIS LPSSSRHLRLRPNHRPSFRPFSVNMSTHT PIEHVVLFKVKDGVDSSKV
Sbjct: 1   MLSLALRTISMLPSSSRHLRLRPNHRPSFRPFSVNMSTHTTPIEHVVLFKVKDGVDSSKV 60

Query: 61  NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV 120
           NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV
Sbjct: 61  NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV 120

Query: 121 VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL 180
           VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL
Sbjct: 121 VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL 180

Query: 181 REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE 240
           REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE
Sbjct: 181 REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE 240

Query: 241 SVIVVDYVVPPAQTASL 258
           SVIVVDYVVPPAQTASL
Sbjct: 241 SVIVVDYVVPPAQTASL 257

[Close]

BLAST of Carg10782 vs. NCBI nr
Match: XP_022999224.1 (stress-response A/B barrel domain-containing protein UP3-like [Cucurbita maxima])

HSP 1 Score: 491.1 bits (1263), Expect = 5.8e-135
Identity = 254/257 (98.83%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MLSLALRTISTLPSSSRHLRLRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV 60
           MLSLALRTISTLPSSSRHLR RP+HRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV
Sbjct: 1   MLSLALRTISTLPSSSRHLRPRPHHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV 60

Query: 61  NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV 120
           NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV
Sbjct: 61  NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV 120

Query: 121 VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL 180
           VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLA+EVKNEILEVIAGL
Sbjct: 121 VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAQEVKNEILEVIAGL 180

Query: 181 REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE 240
           REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE
Sbjct: 181 REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE 240

Query: 241 SVIVVDYVVPPAQTASL 258
           SVIVVDYVVPPAQTASL
Sbjct: 241 SVIVVDYVVPPAQTASL 257

[Close]

BLAST of Carg10782 vs. NCBI nr
Match: XP_023523005.1 (stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 431.8 bits (1109), Expect = 4.2e-117
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 36  MSTHTPPIEHVVLFKVKDGVDSSKVNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFT 95
           MSTHTPPIEHVVLFKVKDGVDSSKVNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFT
Sbjct: 1   MSTHTPPIEHVVLFKVKDGVDSSKVNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFT 60

Query: 96  HLLHSRYPSKEDLSSYSAHSAHVDVVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALR 155
           HLLHSRYPSKEDLSSYSAHSAHVDVVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALR
Sbjct: 61  HLLHSRYPSKEDLSSYSAHSAHVDVVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALR 120

Query: 156 ITFLKLKENLAEEVKNEILEVIAGLREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGP 215
           ITFLKLKENLAEEVKNEILEVIAGLREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGP
Sbjct: 121 ITFLKLKENLAEEVKNEILEVIAGLREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGP 180

Query: 216 KELEAASSDPEMVELHKEKVREHLESVIVVDYVVPPAQTASL 258
           KELEAASSDPEMVELHKEKVREHLESVIVVDYVVPPAQTASL
Sbjct: 181 KELEAASSDPEMVELHKEKVREHLESVIVVDYVVPPAQTASL 222

[Close]

BLAST of Carg10782 vs. NCBI nr
Match: XP_038889133.1 (stress-response A/B barrel domain-containing protein UP3 [Benincasa hispida])

HSP 1 Score: 409.1 bits (1050), Expect = 2.9e-110
Identity = 218/258 (84.50%), Postives = 231/258 (89.53%), Query Frame = 0


Query: 1   MLSLALRTISTLPSSSRHLRLRP-NHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSK 60
           MLS ALR+ STLPS+SRHLRLR  N  PSFRPFSVNMS HT PIEHVVLFKVKDG+DSSK
Sbjct: 1   MLSSALRSFSTLPSTSRHLRLRRLNPSPSFRPFSVNMSAHTQPIEHVVLFKVKDGLDSSK 60

Query: 61  VNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVD 120
           VNDMLTGLN L SL+QVLH+TA P+LRN SS+S FTHLLHSRY SKEDLS YSAH AH +
Sbjct: 61  VNDMLTGLNGLISLDQVLHITAGPILRNRSSSSTFTHLLHSRYSSKEDLSIYSAHPAHTN 120

Query: 121 VVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAG 180
           VVKQFVLPICDDIMAVDWVADAL+GP+ AP GSALR+TFLKLKENL EEVK+EILEVIAG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALKGPIVAPSGSALRLTFLKLKENLGEEVKSEILEVIAG 180

Query: 181 LREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHL 240
           LREKLGPNVQLTVGENFSP RAKG+SIASIAIFPGP ELEAA SD EMVEL KEKVREHL
Sbjct: 181 LREKLGPNVQLTVGENFSPARAKGFSIASIAIFPGPNELEAAVSDQEMVELQKEKVREHL 240

Query: 241 ESVIVVDYVVPPAQTASL 258
           ESVIVVDYVVP  QTASL
Sbjct: 241 ESVIVVDYVVP--QTASL 256

[Close]

BLAST of Carg10782 vs. ExPASy Swiss-Prot
Match: Q9SIP1 (Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana OX=3702 GN=UP3 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.5e-65
Identity = 140/252 (55.56%), Postives = 178/252 (70.63%), Query Frame = 0


Query: 8   TISTLPSSSRHLRLRPNHRPSFRPFSVNMSTHTPP---IEHVVLFKVKDGVDSSKVNDML 67
           TIST   S  +LRL P      R FSV MS+ TP    IEH+VLFK KD  DS+K+  M+
Sbjct: 17  TISTTKHSRINLRLLPR-----RSFSV-MSSSTPQSQIIEHIVLFKTKDDADSTKITSMI 76

Query: 68  TGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDVVKQF 127
             LN+L  L+QVLH++ +P L   SSA+ FTH+LHSRY SKEDL+SY+AH  HV VVK+ 
Sbjct: 77  NNLNALAYLDQVLHISTSP-LHRISSATAFTHVLHSRYESKEDLASYAAHPDHVRVVKES 136

Query: 128 VLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGLREKL 187
           VLPICDDIMAVDW+AD + G VA  PGS  ++T LKLKE++A+E K+EI  VI GL EK 
Sbjct: 137 VLPICDDIMAVDWIADRIPGTVAPLPGSVAKLTLLKLKEDVADEAKSEITGVIKGLSEKF 196

Query: 188 GPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLESVIV 247
               Q+TVGENFSP RAKG+SIASIA F    E+EA  +  E+V   K+KVR++++S IV
Sbjct: 197 PGIDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQKDKVRDYVDSTIV 256

Query: 248 VDYVVPPAQTAS 257
           V++VVP +  +S
Sbjct: 257 VEFVVPSSSQSS 261

[Close]

BLAST of Carg10782 vs. ExPASy Swiss-Prot
Match: Q9SYD8 (Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thaliana OX=3702 GN=DABB1 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.9e-44
Identity = 104/210 (49.52%), Postives = 145/210 (69.05%), Query Frame = 0


Query: 43  IEHVVLFKVK-DGVDSSKVNDMLTGLNSLTSLEQVLHLTAAPVLR-NCSSASNFTHLLHS 102
           +EHVVLFK+  D VDS K+N M+ G+N L +L+QVLHL    + R   ++AS+FTH+LHS
Sbjct: 5   VEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVLHS 64

Query: 103 RYPSKEDLSSYSAHSAHVDVVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLK 162
           RY SKEDL++Y+ H  HV VVK+    I +DIMAVDW+A+     +A P GS  +IT LK
Sbjct: 65  RYRSKEDLNAYAIHPDHVRVVKESE-SIREDIMAVDWIAEQAPEALAPPLGSIGKITLLK 124

Query: 163 LKENLAEEVKNEILEVIAGLREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEA 222
           LKEN+ EE K EI+EV   ++EK     Q+TVGENFSPGR+K +SI SI+ F    E+EA
Sbjct: 125 LKENVMEEAKLEIMEV---MKEKFEGIDQITVGENFSPGRSKDFSIGSISYFRDLGEIEA 184

Query: 223 ASSDPEMVELHKEKVREHLESVIVVDYVVP 251
                + ++L  +K+R++++  IVV++ VP
Sbjct: 185 VD---DQMKLQNDKIRDYVDDTIVVEFNVP 207

[Close]

BLAST of Carg10782 vs. ExPASy Swiss-Prot
Match: Q9LUV2 (Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana OX=3702 GN=HS1 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.0e-05
Identity = 30/99 (30.30%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 42  PIEHVVLFKVKDGVDSSKVNDMLTGLNSLTSL---EQVLHLTAAPVLRNCSSASNFTHLL 101
           P++HV+L   KDGV   K+ +++ G  +L +L    +  H      + N      +TH+ 
Sbjct: 7   PVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLH--QGYTHIF 66

Query: 102 HSRYPSKEDLSSYSAHSAHVDVVKQFVLPICDDIMAVDW 138
            S + SKE ++ Y AH AHV+    F L   D ++ +D+
Sbjct: 67  ESTFESKEAVAEYIAHPAHVEFATIF-LGSLDKVLVIDY 102

[Close]

BLAST of Carg10782 vs. ExPASy TrEMBL
Match: A0A6J1G4Q8 (stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita moschata OX=3662 GN=LOC111450717 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135
Identity = 255/257 (99.22%), Postives = 255/257 (99.22%), Query Frame = 0


Query: 1   MLSLALRTISTLPSSSRHLRLRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV 60
           MLSLALRTIS LPSSSRHLRLRPNHRPSFRPFSVNMSTHT PIEHVVLFKVKDGVDSSKV
Sbjct: 1   MLSLALRTISMLPSSSRHLRLRPNHRPSFRPFSVNMSTHTTPIEHVVLFKVKDGVDSSKV 60

Query: 61  NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV 120
           NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV
Sbjct: 61  NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV 120

Query: 121 VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL 180
           VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL
Sbjct: 121 VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL 180

Query: 181 REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE 240
           REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE
Sbjct: 181 REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE 240

Query: 241 SVIVVDYVVPPAQTASL 258
           SVIVVDYVVPPAQTASL
Sbjct: 241 SVIVVDYVVPPAQTASL 257

[Close]

BLAST of Carg10782 vs. ExPASy TrEMBL
Match: A0A6J1KGF6 (stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita maxima OX=3661 GN=LOC111493663 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 2.8e-135
Identity = 254/257 (98.83%), Postives = 256/257 (99.61%), Query Frame = 0


Query: 1   MLSLALRTISTLPSSSRHLRLRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV 60
           MLSLALRTISTLPSSSRHLR RP+HRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV
Sbjct: 1   MLSLALRTISTLPSSSRHLRPRPHHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSKV 60

Query: 61  NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV 120
           NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV
Sbjct: 61  NDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDV 120

Query: 121 VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGL 180
           VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLA+EVKNEILEVIAGL
Sbjct: 121 VKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAQEVKNEILEVIAGL 180

Query: 181 REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE 240
           REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE
Sbjct: 181 REKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLE 240

Query: 241 SVIVVDYVVPPAQTASL 258
           SVIVVDYVVPPAQTASL
Sbjct: 241 SVIVVDYVVPPAQTASL 257

[Close]

BLAST of Carg10782 vs. ExPASy TrEMBL
Match: A0A0A0LET1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000190 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 2.0e-109
Identity = 212/258 (82.17%), Postives = 231/258 (89.53%), Query Frame = 0


Query: 1   MLSLALRTISTLPSSSRHLR-LRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSK 60
           MLS ALRT++TLPS+SR+LR LR N  PS RPFSV MS HT PIEH+VLFKVK+G+DSSK
Sbjct: 25  MLSSALRTLTTLPSTSRNLRLLRLNPCPSSRPFSVKMSAHTQPIEHIVLFKVKEGIDSSK 84

Query: 61  VNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVD 120
           VNDML GLN L SL+QVLHLTA P+LRN SS+S+FTHLLHSRYPSKEDLS YSAH AH++
Sbjct: 85  VNDMLNGLNGLISLDQVLHLTAGPILRNRSSSSSFTHLLHSRYPSKEDLSIYSAHPAHMN 144

Query: 121 VVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAG 180
           VVKQFVLPICDDIMAVDWVADALQG +  PPGSALR+TFLKLKENL +EVK +ILEVIAG
Sbjct: 145 VVKQFVLPICDDIMAVDWVADALQGSLVPPPGSALRVTFLKLKENLGDEVKGQILEVIAG 204

Query: 181 LREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHL 240
           LREKLGPNVQLTVGENFSP RAKG+SIASIAI PGP ELEAA+SD EMVEL KEKVREHL
Sbjct: 205 LREKLGPNVQLTVGENFSPARAKGFSIASIAILPGPNELEAAASDKEMVELQKEKVREHL 264

Query: 241 ESVIVVDYVVPPAQTASL 258
           ESVIVVDYVVPP QTASL
Sbjct: 265 ESVIVVDYVVPPPQTASL 282

[Close]

BLAST of Carg10782 vs. ExPASy TrEMBL
Match: A0A5D3CI21 (Stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001200 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.2e-107
Identity = 212/258 (82.17%), Postives = 228/258 (88.37%), Query Frame = 0


Query: 1   MLSLALRTISTLPSSSRHL-RLRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSK 60
           MLS ALRT STLP SSR+L RLR N   S RPFSVNMS HT PIEH+VLFKVKDG+DSSK
Sbjct: 1   MLSSALRTWSTLPFSSRNLRRLRLNPCHSSRPFSVNMSAHTQPIEHIVLFKVKDGLDSSK 60

Query: 61  VNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVD 120
           VNDML GLN L SL+QVLHLTA P+LRN SS S FTHLLHSRYPSKEDLS YSAH AH++
Sbjct: 61  VNDMLNGLNGLNSLDQVLHLTAGPILRNRSS-STFTHLLHSRYPSKEDLSIYSAHPAHMN 120

Query: 121 VVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAG 180
           VVKQFVLPICDDIMAVDWVADALQGP+   PGSALR+TFLKLKENL +EVK +ILEVIAG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALQGPLVPSPGSALRVTFLKLKENLGDEVKGQILEVIAG 180

Query: 181 LREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHL 240
           +REKLGPNVQLTVG+NFSP RAKG+SIASIAIFPGP ELEAA+SD EMVEL KEKVREHL
Sbjct: 181 MREKLGPNVQLTVGDNFSPARAKGFSIASIAIFPGPNELEAAASDKEMVELQKEKVREHL 240

Query: 241 ESVIVVDYVVPPAQTASL 258
           ESVIVVDYVVPP +TASL
Sbjct: 241 ESVIVVDYVVPPPKTASL 257

[Close]

BLAST of Carg10782 vs. ExPASy TrEMBL
Match: A0A1S3CBB4 (stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo OX=3656 GN=LOC103498768 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.2e-107
Identity = 212/258 (82.17%), Postives = 228/258 (88.37%), Query Frame = 0


Query: 1   MLSLALRTISTLPSSSRHL-RLRPNHRPSFRPFSVNMSTHTPPIEHVVLFKVKDGVDSSK 60
           MLS ALRT STLP SSR+L RLR N   S RPFSVNMS HT PIEH+VLFKVKDG+DSSK
Sbjct: 1   MLSSALRTWSTLPFSSRNLRRLRLNPCHSSRPFSVNMSAHTQPIEHIVLFKVKDGLDSSK 60

Query: 61  VNDMLTGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVD 120
           VNDML GLN L SL+QVLHLTA P+LRN SS S FTHLLHSRYPSKEDLS YSAH AH++
Sbjct: 61  VNDMLNGLNGLNSLDQVLHLTAGPILRNRSS-STFTHLLHSRYPSKEDLSIYSAHPAHMN 120

Query: 121 VVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAG 180
           VVKQFVLPICDDIMAVDWVADALQGP+   PGSALR+TFLKLKENL +EVK +ILEVIAG
Sbjct: 121 VVKQFVLPICDDIMAVDWVADALQGPLVPSPGSALRVTFLKLKENLGDEVKGQILEVIAG 180

Query: 181 LREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHL 240
           +REKLGPNVQLTVG+NFSP RAKG+SIASIAIFPGP ELEAA+SD EMVEL KEKVREHL
Sbjct: 181 MREKLGPNVQLTVGDNFSPARAKGFSIASIAIFPGPNELEAAASDKEMVELQKEKVREHL 240

Query: 241 ESVIVVDYVVPPAQTASL 258
           ESVIVVDYVVPP +TASL
Sbjct: 241 ESVIVVDYVVPPPKTASL 257

[Close]

BLAST of Carg10782 vs. TAIR 10
Match: AT2G31670.1 (Stress responsive alpha-beta barrel domain protein )

HSP 1 Score: 248.4 bits (633), Expect = 6.1e-66
Identity = 140/252 (55.56%), Postives = 178/252 (70.63%), Query Frame = 0


Query: 8   TISTLPSSSRHLRLRPNHRPSFRPFSVNMSTHTPP---IEHVVLFKVKDGVDSSKVNDML 67
           TIST   S  +LRL P      R FSV MS+ TP    IEH+VLFK KD  DS+K+  M+
Sbjct: 17  TISTTKHSRINLRLLPR-----RSFSV-MSSSTPQSQIIEHIVLFKTKDDADSTKITSMI 76

Query: 68  TGLNSLTSLEQVLHLTAAPVLRNCSSASNFTHLLHSRYPSKEDLSSYSAHSAHVDVVKQF 127
             LN+L  L+QVLH++ +P L   SSA+ FTH+LHSRY SKEDL+SY+AH  HV VVK+ 
Sbjct: 77  NNLNALAYLDQVLHISTSP-LHRISSATAFTHVLHSRYESKEDLASYAAHPDHVRVVKES 136

Query: 128 VLPICDDIMAVDWVADALQGPVAAPPGSALRITFLKLKENLAEEVKNEILEVIAGLREKL 187
           VLPICDDIMAVDW+AD + G VA  PGS  ++T LKLKE++A+E K+EI  VI GL EK 
Sbjct: 137 VLPICDDIMAVDWIADRIPGTVAPLPGSVAKLTLLKLKEDVADEAKSEITGVIKGLSEKF 196

Query: 188 GPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEAASSDPEMVELHKEKVREHLESVIV 247
               Q+TVGENFSP RAKG+SIASIA F    E+EA  +  E+V   K+KVR++++S IV
Sbjct: 197 PGIDQITVGENFSPARAKGFSIASIAYFKDLSEMEAVDAQKELVNSQKDKVRDYVDSTIV 256

Query: 248 VDYVVPPAQTAS 257
           V++VVP +  +S
Sbjct: 257 VEFVVPSSSQSS 261

[Close]

BLAST of Carg10782 vs. TAIR 10
Match: AT1G51360.1 (dimeric A/B barrel domainS-protein 1 )

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-45
Identity = 104/210 (49.52%), Postives = 145/210 (69.05%), Query Frame = 0


Query: 43  IEHVVLFKVK-DGVDSSKVNDMLTGLNSLTSLEQVLHLTAAPVLR-NCSSASNFTHLLHS 102
           +EHVVLFK+  D VDS K+N M+ G+N L +L+QVLHL    + R   ++AS+FTH+LHS
Sbjct: 5   VEHVVLFKLNDDDVDSGKINSMVNGINELVNLDQVLHLYCGSIHRLITTTASDFTHVLHS 64

Query: 103 RYPSKEDLSSYSAHSAHVDVVKQFVLPICDDIMAVDWVADALQGPVAAPPGSALRITFLK 162
           RY SKEDL++Y+ H  HV VVK+    I +DIMAVDW+A+     +A P GS  +IT LK
Sbjct: 65  RYRSKEDLNAYAIHPDHVRVVKESE-SIREDIMAVDWIAEQAPEALAPPLGSIGKITLLK 124

Query: 163 LKENLAEEVKNEILEVIAGLREKLGPNVQLTVGENFSPGRAKGYSIASIAIFPGPKELEA 222
           LKEN+ EE K EI+EV   ++EK     Q+TVGENFSPGR+K +SI SI+ F    E+EA
Sbjct: 125 LKENVMEEAKLEIMEV---MKEKFEGIDQITVGENFSPGRSKDFSIGSISYFRDLGEIEA 184

Query: 223 ASSDPEMVELHKEKVREHLESVIVVDYVVP 251
                + ++L  +K+R++++  IVV++ VP
Sbjct: 185 VD---DQMKLQNDKIRDYVDDTIVVEFNVP 207

[Close]

BLAST of Carg10782 vs. TAIR 10
Match: AT3G17210.1 (heat stable protein 1 )

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-06
Identity = 30/99 (30.30%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 42  PIEHVVLFKVKDGVDSSKVNDMLTGLNSLTSL---EQVLHLTAAPVLRNCSSASNFTHLL 101
           P++HV+L   KDGV   K+ +++ G  +L +L    +  H      + N      +TH+ 
Sbjct: 7   PVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLH--QGYTHIF 66

Query: 102 HSRYPSKEDLSSYSAHSAHVDVVKQFVLPICDDIMAVDW 138
            S + SKE ++ Y AH AHV+    F L   D ++ +D+
Sbjct: 67  ESTFESKEAVAEYIAHPAHVEFATIF-LGSLDKVLVIDY 102

The following BLAST results are available for this feature:

BLAST of Carg10782 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521400.1	1.1e-136	100.00	stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo su...	[more]
XP_022946739.1	4.4e-135	99.22	stress-response A/B barrel domain-containing protein UP3-like [Cucurbita moschat...	[more]
XP_022999224.1	5.8e-135	98.83	stress-response A/B barrel domain-containing protein UP3-like [Cucurbita maxima]	[more]
XP_023523005.1	4.2e-117	100.00	stress-response A/B barrel domain-containing protein UP3-like [Cucurbita pepo su...	[more]
XP_038889133.1	2.9e-110	84.50	stress-response A/B barrel domain-containing protein UP3 [Benincasa hispida]	[more]

BLAST of Carg10782 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIP1	8.5e-65	55.56	Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana...	[more]
Q9SYD8	4.9e-44	49.52	Stress-response A/B barrel domain-containing protein DABB1 OS=Arabidopsis thalia...	[more]
Q9LUV2	2.0e-05	30.30	Stress-response A/B barrel domain-containing protein HS1 OS=Arabidopsis thaliana...	[more]

BLAST of Carg10782 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4Q8	2.1e-135	99.22	stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita mosch...	[more]
A0A6J1KGF6	2.8e-135	98.83	stress-response A/B barrel domain-containing protein UP3-like OS=Cucurbita maxim...	[more]
A0A0A0LET1	2.0e-109	82.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000190 PE=4 SV=1	[more]
A0A5D3CI21	7.2e-107	82.17	Stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo var. ma...	[more]
A0A1S3CBB4	7.2e-107	82.17	stress-response A/B barrel domain-containing protein UP3 OS=Cucumis melo OX=3656...	[more]

BLAST of Carg10782 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31670.1	6.1e-66	55.56	Stress responsive alpha-beta barrel domain protein	[more]
AT1G51360.1	3.5e-45	49.52	dimeric A/B barrel domainS-protein 1	[more]
AT3G17210.1	1.4e-06	30.30	heat stable protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013097	Stress responsive alpha-beta barrel	SMART	SM00886	Dabb_2	coord: 43..139 e-value: 5.7E-20 score: 82.4 coord: 153..249 e-value: 0.0034 score: 26.6
IPR013097	Stress responsive alpha-beta barrel	PFAM	PF07876	Dabb	coord: 43..138 e-value: 2.6E-19 score: 69.6 coord: 155..249 e-value: 4.6E-13 score: 49.6
IPR013097	Stress responsive alpha-beta barrel	PROSITE	PS51502	S_R_A_B_BARREL	coord: 43..137 score: 23.672958
IPR013097	Stress responsive alpha-beta barrel	PROSITE	PS51502	S_R_A_B_BARREL	coord: 153..247 score: 19.177402
None	No IPR available	GENE3D	3.30.70.100		coord: 150..249 e-value: 4.8E-13 score: 51.4 coord: 34..142 e-value: 7.7E-22 score: 79.7
None	No IPR available	PANTHER	PTHR33178:SF3	STRESS-RESPONSE A/B BARREL DOMAIN-CONTAINING PROTEIN UP3	coord: 29..256
IPR044662	Stress-response A/B barrel domain-containing protein HS1/DABB1-like	PANTHER	PTHR33178	FAMILY NOT NAMED	coord: 29..256
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	54909	Dimeric alpha+beta barrel	coord: 41..143
IPR011008	Dimeric alpha-beta barrel	SUPERFAMILY	54909	Dimeric alpha+beta barrel	coord: 152..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10782-RA	Carg10782-RA	mRNA