Carg10610 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10610
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ethylene-responsive transcription factor ERF011-like
Location	Carg_Chr01: 12308932 .. 12309366 (+)
RNA-Seq Expression	Carg10610
Synteny	Carg10610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGACAAGTTTGCTCGGGTGTAAGTTCATCGACAGAGAAGAGGAAGCAAAGGCATCAACAACAGAAGCAATACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTAGCGGAAATCAGAGAACCCAACAAGCGTTCCAGGATTTGGCTTGGTTCTTACACAACTCCGGTCGCTGCCGCCAGGGCTTACGACACCGCCGTTTTCTACCTCCGAGGCCCCTCCGCCCGGCTGAATTTCCCGGAATCGATTTTCGAAGAGGACCAACTGCAGGATGTGTCAGCCGCCTCCATACGAAAAAGAGCCACCGAAATCGGCGCTAGGGTTGACGCCATCCAAACCTCTCTACTTGCCTCTAATTCAAACTCTCAAATTTCGGAGAAGCCTGATTTAAACCAGTACCCCAACCCCGAAAGCTCAGACGACGATTAA

mRNA sequence

ATGGAAGGACAAGTTTGCTCGGGTGTAAGTTCATCGACAGAGAAGAGGAAGCAAAGGCATCAACAACAGAAGCAATACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTAGCGGAAATCAGAGAACCCAACAAGCGTTCCAGGATTTGGCTTGGTTCTTACACAACTCCGGTCGCTGCCGCCAGGGCTTACGACACCGCCGTTTTCTACCTCCGAGGCCCCTCCGCCCGGCTGAATTTCCCGGAATCGATTTTCGAAGAGGACCAACTGCAGGATGTGTCAGCCGCCTCCATACGAAAAAGAGCCACCGAAATCGGCGCTAGGGTTGACGCCATCCAAACCTCTCTACTTGCCTCTAATTCAAACTCTCAAATTTCGGAGAAGCCTGATTTAAACCAGTACCCCAACCCCGAAAGCTCAGACGACGATTAA

Coding sequence (CDS)

ATGGAAGGACAAGTTTGCTCGGGTGTAAGTTCATCGACAGAGAAGAGGAAGCAAAGGCATCAACAACAGAAGCAATACAGAGGAATAAGGATGAGGAAGTGGGGGAAGTGGGTAGCGGAAATCAGAGAACCCAACAAGCGTTCCAGGATTTGGCTTGGTTCTTACACAACTCCGGTCGCTGCCGCCAGGGCTTACGACACCGCCGTTTTCTACCTCCGAGGCCCCTCCGCCCGGCTGAATTTCCCGGAATCGATTTTCGAAGAGGACCAACTGCAGGATGTGTCAGCCGCCTCCATACGAAAAAGAGCCACCGAAATCGGCGCTAGGGTTGACGCCATCCAAACCTCTCTACTTGCCTCTAATTCAAACTCTCAAATTTCGGAGAAGCCTGATTTAAACCAGTACCCCAACCCCGAAAGCTCAGACGACGATTAA

Protein sequence

MEGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLASNSNSQISEKPDLNQYPNPESSDDD

Homology

[Close]

BLAST of Carg10610 vs. NCBI nr
Match: XP_022941539.1 (ethylene-responsive transcription factor ERF011-like [Cucurbita moschata] >XP_022941540.1 ethylene-responsive transcription factor ERF011-like [Cucurbita moschata] >XP_023523572.1 ethylene-responsive transcription factor ERF011-like [Cucurbita pepo subsp. pepo] >XP_023523573.1 ethylene-responsive transcription factor ERF011-like [Cucurbita pepo subsp. pepo] >KAG6608460.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037796.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.5 bits (711), Expect = 3.3e-71
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MEGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA 60
           MEGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA
Sbjct: 1   MEGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA 60

Query: 61  AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS 120
           AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS
Sbjct: 61  AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS 120

Query: 121 NSNSQISEKPDLNQYPNPESSDDD 145
           NSNSQISEKPDLNQYPNPESSDDD
Sbjct: 121 NSNSQISEKPDLNQYPNPESSDDD 144

[Close]

BLAST of Carg10610 vs. NCBI nr
Match: XP_022982286.1 (ethylene-responsive transcription factor ERF011-like [Cucurbita maxima])

HSP 1 Score: 277.3 bits (708), Expect = 7.3e-71
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MEGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA 60
           MEGQVCSGVSSSTEKRKQRHQQ+KQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA
Sbjct: 55  MEGQVCSGVSSSTEKRKQRHQQEKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA 114

Query: 61  AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS 120
           AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS
Sbjct: 115 AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS 174

Query: 121 NSNSQISEKPDLNQYPNPESSDDD 145
           NSNSQISEKPDLNQYPNPESSDDD
Sbjct: 175 NSNSQISEKPDLNQYPNPESSDDD 198

[Close]

BLAST of Carg10610 vs. NCBI nr
Match: XP_038897082.1 (ethylene-responsive transcription factor ERF011-like [Benincasa hispida])

HSP 1 Score: 235.0 bits (598), Expect = 4.2e-58
Identity = 124/149 (83.22%), Postives = 135/149 (90.60%), Query Frame = 0


Query: 1   MEGQVCSGVSSSTEKRKQRH-----QQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60
           MEG+VCS V+SS  KRKQRH     QQ+K YRGIRMRKWGKWVAEIREPNKRSRIWLGSY
Sbjct: 1   MEGEVCSAVNSS-PKRKQRHSQNHLQQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60

Query: 61  TTPVAAARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQT 120
           TTPVAAARAYDTAVFYLRGP+ARLNFPE +FE DQL D+SAASIRKRATE+GARVDAIQT
Sbjct: 61  TTPVAAARAYDTAVFYLRGPTARLNFPELMFEADQLHDMSAASIRKRATEVGARVDAIQT 120

Query: 121 SLLASNSNSQISEKPDLNQYPNPESSDDD 145
           SL ASNS +QIS+KPDLN+YPNPE+SDDD
Sbjct: 121 SLNASNSGTQISDKPDLNEYPNPETSDDD 148

[Close]

BLAST of Carg10610 vs. NCBI nr
Match: XP_008452588.1 (PREDICTED: ethylene-responsive transcription factor ERF011-like [Cucumis melo] >KAA0064410.1 ethylene-responsive transcription factor ERF011-like protein [Cucumis melo var. makuwa] >TYK20177.1 ethylene-responsive transcription factor ERF011-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 233.8 bits (595), Expect = 9.3e-58
Identity = 122/151 (80.79%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MEGQVCSGVSSSTEKRKQRH------QQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGS 60
           MEG+VCS V+SS+ KRKQRH      QQ+K YRGIRMRKWGKWVAEIREPNKRSRIWLGS
Sbjct: 1   MEGEVCSSVNSSSPKRKQRHDDQNHLQQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGS 60

Query: 61  YTTPVAAARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQ 120
           YTTPVAAARAYDTAVFYLRGP+ARLNFP+ +FE DQL D+SAASIRKRATE+GARVDAIQ
Sbjct: 61  YTTPVAAARAYDTAVFYLRGPTARLNFPDLMFETDQLHDMSAASIRKRATEVGARVDAIQ 120

Query: 121 TSLLASNS-NSQISEKPDLNQYPNPESSDDD 145
           TSL ASNS  +Q+S+KPDLN+YPNPE+SDDD
Sbjct: 121 TSLHASNSAGTQVSDKPDLNEYPNPETSDDD 151

[Close]

BLAST of Carg10610 vs. NCBI nr
Match: XP_004141277.1 (ethylene-responsive transcription factor ERF011 [Cucumis sativus] >KGN55226.1 hypothetical protein Csa_011974 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 6.0e-57
Identity = 124/150 (82.67%), Postives = 136/150 (90.67%), Query Frame = 0


Query: 1   MEGQVCSGVSSSTEKRKQRH-----QQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60
           MEG+VCS V+SS+ KRKQRH     QQQK YRGIRMRKWGKWVAEIREPNKRSRIWLGSY
Sbjct: 1   MEGEVCS-VNSSSPKRKQRHDQNHLQQQKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60

Query: 61  TTPVAAARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQT 120
           TTPVAAARAYDTAVFYLRGP+ARLNFP+ +FE DQL D+SAASIRKRATE+GARVDAIQT
Sbjct: 61  TTPVAAARAYDTAVFYLRGPTARLNFPDLMFETDQLHDMSAASIRKRATEVGARVDAIQT 120

Query: 121 SLLASNS-NSQISEKPDLNQYPNPESSDDD 145
           SL ASNS  +QIS+KPDLN+YPNPE+SDDD
Sbjct: 121 SLHASNSAGTQISDKPDLNEYPNPETSDDD 149

[Close]

BLAST of Carg10610 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 6.7e-35
Identity = 78/135 (57.78%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 21  QQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLN 80
           ++++ ++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 81  FPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLASNSNSQI-----------SEK 140
           FPE +      +D+SAA+IRK+ATE+GA+VDAI  +++ +N   ++            E 
Sbjct: 76  FPE-LLPCTSAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLLEL 135

Query: 141 PDLNQYPNPESSDDD 145
            DLN+ P+PE+ DDD
Sbjct: 136 VDLNKLPDPENLDDD 149

[Close]

BLAST of Carg10610 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.7e-34
Identity = 88/147 (59.86%), Postives = 103/147 (70.07%), Query Frame = 0


Query: 11  SSTEKRKQRHQQQ--------KQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAA 70
           S+  KR+Q  Q++        K YRGIR RKWGKWVAEIREPNKRSR+WLGSYTT +AAA
Sbjct: 8   STMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAA 67

Query: 71  RAYDTAVFYLRGPSARLNFPESIF-EEDQLQ-----DVSAASIRKRATEIGARVDAIQTS 130
           RAYD AVFYLRGPSARLNFP+ +  EED L      D+ AA IR++A E+GARVDA+  S
Sbjct: 68  RAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGARVDALLAS 127

Query: 131 LLASNSNSQISE-KPDLNQYPNPESSD 143
              S ++S     KPDLNQ   PES D
Sbjct: 128 AAPSMAHSTPPVIKPDLNQI--PESGD 152

[Close]

BLAST of Carg10610 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 4.8e-33
Identity = 76/132 (57.58%), Postives = 99/132 (75.00%), Query Frame = 0


Query: 21  QQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLN 80
           ++ + Y+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARLN
Sbjct: 16  KRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLN 75

Query: 81  FPESI-FEEDQLQDVSAASIRKRATEIGARVDAIQTS-------LLASNSNSQISEKPDL 140
           FPE +  E+   +D+SAA+IRK+ATE+GA+VDA+ T+       +   N +S +  K   
Sbjct: 76  FPELLPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKNFH 135

Query: 141 NQYPNPESSDDD 145
             Y N E  +++
Sbjct: 136 RNYQNGEREEEE 147

[Close]

BLAST of Carg10610 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 8.2e-33
Identity = 85/165 (51.52%), Postives = 108/165 (65.45%), Query Frame = 0


Query: 2   EGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 61
           E  V + V+++T     R +  K Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AA
Sbjct: 4   EAAVTATVTAATMGIGTRKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAA 63

Query: 62  ARAYDTAVFYLRGPSARLNFPESIF------EEDQLQDVSAASIRKRATEIGARVDAIQT 121
           ARAYDTAVFYLRGPSARLNFPE +          +  D+SAA IR++A E+GA+VDA+  
Sbjct: 64  ARAYDTAVFYLRGPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGA 123

Query: 122 SLLAS----------------NSNSQISEKPDLNQYPNPESSDDD 145
           +++ +                 S +   E+ DLN+ P+PE+SD D
Sbjct: 124 TVVVNTGGENRGDYEKIENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Carg10610 vs. ExPASy Swiss-Prot
Match: Q8W3M3 (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.3e-32
Identity = 78/133 (58.65%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 9   VSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTA 68
           V +   KR      +K+Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTA
Sbjct: 19  VMTEKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTA 78

Query: 69  VFYLRGPSARLNFPESIFE-----EDQLQDVSAASIRKRATEIGARVDAIQTSLLASNSN 128
           VFYLRGPSARLNFPE +F+     E    D+S   IRK+A E+GARVDA           
Sbjct: 79  VFYLRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA------ELRLE 138

Query: 129 SQISEKPDLNQYP 137
           +++ E  D+N+ P
Sbjct: 139 NRMVENLDMNKLP 145

[Close]

BLAST of Carg10610 vs. ExPASy TrEMBL
Match: A0A6J1FTY7 (ethylene-responsive transcription factor ERF011-like OS=Cucurbita moschata OX=3662 GN=LOC111446813 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.6e-71
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MEGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA 60
           MEGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA
Sbjct: 1   MEGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA 60

Query: 61  AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS 120
           AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS
Sbjct: 61  AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS 120

Query: 121 NSNSQISEKPDLNQYPNPESSDDD 145
           NSNSQISEKPDLNQYPNPESSDDD
Sbjct: 121 NSNSQISEKPDLNQYPNPESSDDD 144

[Close]

BLAST of Carg10610 vs. ExPASy TrEMBL
Match: A0A6J1IYX2 (ethylene-responsive transcription factor ERF011-like OS=Cucurbita maxima OX=3661 GN=LOC111481164 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.6e-71
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MEGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA 60
           MEGQVCSGVSSSTEKRKQRHQQ+KQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA
Sbjct: 55  MEGQVCSGVSSSTEKRKQRHQQEKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVA 114

Query: 61  AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS 120
           AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS
Sbjct: 115 AARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLAS 174

Query: 121 NSNSQISEKPDLNQYPNPESSDDD 145
           NSNSQISEKPDLNQYPNPESSDDD
Sbjct: 175 NSNSQISEKPDLNQYPNPESSDDD 198

[Close]

BLAST of Carg10610 vs. ExPASy TrEMBL
Match: A0A5A7VAZ8 (Ethylene-responsive transcription factor ERF011-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003090 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.5e-58
Identity = 122/151 (80.79%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MEGQVCSGVSSSTEKRKQRH------QQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGS 60
           MEG+VCS V+SS+ KRKQRH      QQ+K YRGIRMRKWGKWVAEIREPNKRSRIWLGS
Sbjct: 1   MEGEVCSSVNSSSPKRKQRHDDQNHLQQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGS 60

Query: 61  YTTPVAAARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQ 120
           YTTPVAAARAYDTAVFYLRGP+ARLNFP+ +FE DQL D+SAASIRKRATE+GARVDAIQ
Sbjct: 61  YTTPVAAARAYDTAVFYLRGPTARLNFPDLMFETDQLHDMSAASIRKRATEVGARVDAIQ 120

Query: 121 TSLLASNS-NSQISEKPDLNQYPNPESSDDD 145
           TSL ASNS  +Q+S+KPDLN+YPNPE+SDDD
Sbjct: 121 TSLHASNSAGTQVSDKPDLNEYPNPETSDDD 151

[Close]

BLAST of Carg10610 vs. ExPASy TrEMBL
Match: A0A1S3BU56 (ethylene-responsive transcription factor ERF011-like OS=Cucumis melo OX=3656 GN=LOC103493569 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.5e-58
Identity = 122/151 (80.79%), Postives = 136/151 (90.07%), Query Frame = 0


Query: 1   MEGQVCSGVSSSTEKRKQRH------QQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGS 60
           MEG+VCS V+SS+ KRKQRH      QQ+K YRGIRMRKWGKWVAEIREPNKRSRIWLGS
Sbjct: 1   MEGEVCSSVNSSSPKRKQRHDDQNHLQQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGS 60

Query: 61  YTTPVAAARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQ 120
           YTTPVAAARAYDTAVFYLRGP+ARLNFP+ +FE DQL D+SAASIRKRATE+GARVDAIQ
Sbjct: 61  YTTPVAAARAYDTAVFYLRGPTARLNFPDLMFETDQLHDMSAASIRKRATEVGARVDAIQ 120

Query: 121 TSLLASNS-NSQISEKPDLNQYPNPESSDDD 145
           TSL ASNS  +Q+S+KPDLN+YPNPE+SDDD
Sbjct: 121 TSLHASNSAGTQVSDKPDLNEYPNPETSDDD 151

[Close]

BLAST of Carg10610 vs. ExPASy TrEMBL
Match: A0A0A0L4Y9 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G641590 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.9e-57
Identity = 124/150 (82.67%), Postives = 136/150 (90.67%), Query Frame = 0


Query: 1   MEGQVCSGVSSSTEKRKQRH-----QQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60
           MEG+VCS V+SS+ KRKQRH     QQQK YRGIRMRKWGKWVAEIREPNKRSRIWLGSY
Sbjct: 1   MEGEVCS-VNSSSPKRKQRHDQNHLQQQKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSY 60

Query: 61  TTPVAAARAYDTAVFYLRGPSARLNFPESIFEEDQLQDVSAASIRKRATEIGARVDAIQT 120
           TTPVAAARAYDTAVFYLRGP+ARLNFP+ +FE DQL D+SAASIRKRATE+GARVDAIQT
Sbjct: 61  TTPVAAARAYDTAVFYLRGPTARLNFPDLMFETDQLHDMSAASIRKRATEVGARVDAIQT 120

Query: 121 SLLASNS-NSQISEKPDLNQYPNPESSDDD 145
           SL ASNS  +QIS+KPDLN+YPNPE+SDDD
Sbjct: 121 SLHASNSAGTQISDKPDLNEYPNPETSDDD 149

[Close]

BLAST of Carg10610 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 148.3 bits (373), Expect = 4.8e-36
Identity = 78/135 (57.78%), Postives = 103/135 (76.30%), Query Frame = 0


Query: 21  QQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLN 80
           ++++ ++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 81  FPESIFEEDQLQDVSAASIRKRATEIGARVDAIQTSLLASNSNSQI-----------SEK 140
           FPE +      +D+SAA+IRK+ATE+GA+VDAI  +++ +N   ++            E 
Sbjct: 76  FPE-LLPCTSAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLLEL 135

Query: 141 PDLNQYPNPESSDDD 145
            DLN+ P+PE+ DDD
Sbjct: 136 VDLNKLPDPENLDDD 149

[Close]

BLAST of Carg10610 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 144.4 bits (363), Expect = 6.9e-35
Identity = 88/147 (59.86%), Postives = 103/147 (70.07%), Query Frame = 0


Query: 11  SSTEKRKQRHQQQ--------KQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAA 70
           S+  KR+Q  Q++        K YRGIR RKWGKWVAEIREPNKRSR+WLGSYTT +AAA
Sbjct: 8   STMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAA 67

Query: 71  RAYDTAVFYLRGPSARLNFPESIF-EEDQLQ-----DVSAASIRKRATEIGARVDAIQTS 130
           RAYD AVFYLRGPSARLNFP+ +  EED L      D+ AA IR++A E+GARVDA+  S
Sbjct: 68  RAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGARVDALLAS 127

Query: 131 LLASNSNSQISE-KPDLNQYPNPESSD 143
              S ++S     KPDLNQ   PES D
Sbjct: 128 AAPSMAHSTPPVIKPDLNQI--PESGD 152

[Close]

BLAST of Carg10610 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 142.1 bits (357), Expect = 3.4e-34
Identity = 76/132 (57.58%), Postives = 99/132 (75.00%), Query Frame = 0


Query: 21  QQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLN 80
           ++ + Y+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARLN
Sbjct: 16  KRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLN 75

Query: 81  FPESI-FEEDQLQDVSAASIRKRATEIGARVDAIQTS-------LLASNSNSQISEKPDL 140
           FPE +  E+   +D+SAA+IRK+ATE+GA+VDA+ T+       +   N +S +  K   
Sbjct: 76  FPELLPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKNFH 135

Query: 141 NQYPNPESSDDD 145
             Y N E  +++
Sbjct: 136 RNYQNGEREEEE 147

[Close]

BLAST of Carg10610 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 141.4 bits (355), Expect = 5.9e-34
Identity = 85/165 (51.52%), Postives = 108/165 (65.45%), Query Frame = 0


Query: 2   EGQVCSGVSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAA 61
           E  V + V+++T     R +  K Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AA
Sbjct: 4   EAAVTATVTAATMGIGTRKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAA 63

Query: 62  ARAYDTAVFYLRGPSARLNFPESIF------EEDQLQDVSAASIRKRATEIGARVDAIQT 121
           ARAYDTAVFYLRGPSARLNFPE +          +  D+SAA IR++A E+GA+VDA+  
Sbjct: 64  ARAYDTAVFYLRGPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGA 123

Query: 122 SLLAS----------------NSNSQISEKPDLNQYPNPESSDDD 145
           +++ +                 S +   E+ DLN+ P+PE+SD D
Sbjct: 124 TVVVNTGGENRGDYEKIENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of Carg10610 vs. TAIR 10
Match: AT4G06746.1 (related to AP2 9 )

HSP 1 Score: 138.7 bits (348), Expect = 3.8e-33
Identity = 78/133 (58.65%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 9   VSSSTEKRKQRHQQQKQYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTA 68
           V +   KR      +K+Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTA
Sbjct: 19  VMTEKPKRNLISSNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTA 78

Query: 69  VFYLRGPSARLNFPESIFE-----EDQLQDVSAASIRKRATEIGARVDAIQTSLLASNSN 128
           VFYLRGPSARLNFPE +F+     E    D+S   IRK+A E+GARVDA           
Sbjct: 79  VFYLRGPSARLNFPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDA------ELRLE 138

Query: 129 SQISEKPDLNQYP 137
           +++ E  D+N+ P
Sbjct: 139 NRMVENLDMNKLP 145

The following BLAST results are available for this feature:

BLAST of Carg10610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941539.1	3.3e-71	100.00	ethylene-responsive transcription factor ERF011-like [Cucurbita moschata] >XP_02...	[more]
XP_022982286.1	7.3e-71	99.31	ethylene-responsive transcription factor ERF011-like [Cucurbita maxima]	[more]
XP_038897082.1	4.2e-58	83.22	ethylene-responsive transcription factor ERF011-like [Benincasa hispida]	[more]
XP_008452588.1	9.3e-58	80.79	PREDICTED: ethylene-responsive transcription factor ERF011-like [Cucumis melo] >...	[more]
XP_004141277.1	6.0e-57	82.67	ethylene-responsive transcription factor ERF011 [Cucumis sativus] >KGN55226.1 hy...	[more]

BLAST of Carg10610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SNE1	6.7e-35	57.78	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8LC30	9.7e-34	59.86	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	4.8e-33	57.58	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22174	8.2e-33	51.52	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W3M3	5.3e-32	58.65	Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg10610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTY7	1.6e-71	100.00	ethylene-responsive transcription factor ERF011-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1IYX2	3.6e-71	99.31	ethylene-responsive transcription factor ERF011-like OS=Cucurbita maxima OX=3661...	[more]
A0A5A7VAZ8	4.5e-58	80.79	Ethylene-responsive transcription factor ERF011-like protein OS=Cucumis melo var...	[more]
A0A1S3BU56	4.5e-58	80.79	ethylene-responsive transcription factor ERF011-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0L4Y9	2.9e-57	82.67	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G641590 PE=...	[more]

BLAST of Carg10610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50260.1	4.8e-36	57.78	cooperatively regulated by ethylene and jasmonate 1	[more]
AT1G46768.1	6.9e-35	59.86	related to AP2 1	[more]
AT5G67190.1	3.4e-34	57.58	DREB and EAR motif protein 2	[more]
AT2G23340.1	5.9e-34	51.52	DREB and EAR motif protein 3	[more]
AT4G06746.1	3.8e-33	58.65	related to AP2 9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 26..37 score: 64.24 coord: 64..84 score: 52.81
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 25..88 e-value: 8.1E-37 score: 138.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 25..74 e-value: 1.7E-11 score: 44.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 25..82 score: 22.312807
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 28..84 e-value: 2.14145E-27 score: 94.6458
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 24..84 e-value: 1.1E-25 score: 91.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..137
None	No IPR available	PANTHER	PTHR31729:SF2	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 10..142
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 10..142
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 25..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10610-RA	Carg10610-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity