Carg10315 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg10315
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
Location	Carg_Chr10: 375529 .. 376635 (-)
RNA-Seq Expression	Carg10315
Synteny	Carg10315

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGGTTTGCAAAAGAGAAGTTCTCTCTCACCACATTCTTCCTTCTTCTACCTCCTGCTCTCTCTTTCTTCGTTCTAGAGACTTCTCTTCGTGTTCTATTCGATTCGCACCAACAGAACCCGTTTACTTCAACTCACTCATAGTCTAAAGAAGATATGAGGTCTGATGCGCGTACTGGAACCCTGAAGTTTCTGTGTAGCTATGGCGGCAAGATTCTTCCCCGTCGAACCGATGGTAAACTCCGTTACGTTGGTGGTCTTACCAGAGTTCTAGCCGTCGATCGCTCTGTCTCGTATTCCGGTTCGTATTTTGTTGTTCCTCGTTTTGTTTGGTGACGTAATCTGTACGTTTTGATATTTGTGTCTAGGTGTTTATGTATGCGTTTTATTCCATTTTGCAGAGTTAATGGTGAAGCTTGGAGAATTCTGTGGTTCTACCGTTACATTGAAGTGCCAATTGCCAGGCGGAGACTTGGAAACCTTGATTTCTGTTAGATCTGACGAAGATTTGGCCAATATCGTCGAGGAATACGATCGTGCTTCTTCGTCGTTGTCGCATCCTCTTCAAATCAGAGCCATTCTTTCGCCTCCGAAGTCTCTCAAGCAAATTTCTCCTCCGTCGAGTGTGGACTTCACTCTTCCTAATTCTCCATGCCACGGCGTGGATTCGCTTCCGAGCTCGCCGCAATACGGAATCAGCGACCGGATCTCTTCTCCTTCGTGCAGATTCAGTCGTCAGATCTCCTCGCCTCCTAATAAATACTTCGTCGGACCGCGAAACTGCCATGGAAGAACCTGTTGCCATGGGAGCCCTAGGTTTTTGTACTCCAGCCCCCACTGTGCTCACGGGAACTGAAGATGAATCCCTAAACTCGAGGCGAGGACTCCGCATATAAAAGTACAAACCCTAGGTAGACGATGACGGGAAAAAAAGAAAAAAAAGAAGCTAAAACAGAACAAGATAGTTTTTAGTTTTGGCTTGTGATTGATTGATTGTTGGGAGAAAGCTTAAAAACTTTCGAATTAATTGGTTTGTGTGGTTGAAAAAAAATTGATTAATCCGGCCGGAGTTTTGCGAGAGGAGGAGTTCTCATTCTCAATCTCAATC

mRNA sequence

TAAGGTTTGCAAAAGAGAAGTTCTCTCTCACCACATTCTTCCTTCTTCTACCTCCTGCTCTCTCTTTCTTCGTTCTAGAGACTTCTCTTCGTGTTCTATTCGATTCGCACCAACAGAACCCGTTTACTTCAACTCACTCATAGTCTAAAGAAGATATGAGGTCTGATGCGCGTACTGGAACCCTGAAGTTTCTGTGTAGCTATGGCGGCAAGATTCTTCCCCGTCGAACCGATGGTAAACTCCGTTACGTTGGTGGTCTTACCAGAGTTCTAGCCGTCGATCGCTCTGTCTCGTATTCCGAGTTAATGGTGAAGCTTGGAGAATTCTGTGGTTCTACCGTTACATTGAAGTGCCAATTGCCAGGCGGAGACTTGGAAACCTTGATTTCTGTTAGATCTGACGAAGATTTGGCCAATATCGTCGAGGAATACGATCGTGCTTCTTCGTCGTTGTCGCATCCTCTTCAAATCAGAGCCATTCTTTCGCCTCCGAAGTCTCTCAAGCAAATTTCTCCTCCGTCGAGTGTGGACTTCACTCTTCCTAATTCTCCATGCCACGGCGTGGATTCGCTTCCGAGCTCGCCGCAATACGGAATCAGCGACCGGATCTCTTCTCCTTCGTGCAGATTCAGTCGTCAGATCTCCTCGCCTCCTAATAAATACTTCGTCGGACCGCGAAACTGCCATGGAAGAACCTGTTGCCATGGGAGCCCTAGGTTTTTGTACTCCAGCCCCCACTGTGCTCACGGGAACTGAAGATGAATCCCTAAACTCGAGGCGAGGACTCCGCATATAAAAGTACAAACCCTAGGTAGACGATGACGGGAAAAAAAGAAAAAAAAGAAGCTAAAACAGAACAAGATAGTTTTTAGTTTTGGCTTGTGATTGATTGATTGTTGGGAGAAAGCTTAAAAACTTTCGAATTAATTGGTTTGTGTGGTTGAAAAAAAATTGATTAATCCGGCCGGAGTTTTGCGAGAGGAGGAGTTCTCATTCTCAATCTCAATC

Coding sequence (CDS)

ATGAGGTCTGATGCGCGTACTGGAACCCTGAAGTTTCTGTGTAGCTATGGCGGCAAGATTCTTCCCCGTCGAACCGATGGTAAACTCCGTTACGTTGGTGGTCTTACCAGAGTTCTAGCCGTCGATCGCTCTGTCTCGTATTCCGAGTTAATGGTGAAGCTTGGAGAATTCTGTGGTTCTACCGTTACATTGAAGTGCCAATTGCCAGGCGGAGACTTGGAAACCTTGATTTCTGTTAGATCTGACGAAGATTTGGCCAATATCGTCGAGGAATACGATCGTGCTTCTTCGTCGTTGTCGCATCCTCTTCAAATCAGAGCCATTCTTTCGCCTCCGAAGTCTCTCAAGCAAATTTCTCCTCCGTCGAGTGTGGACTTCACTCTTCCTAATTCTCCATGCCACGGCGTGGATTCGCTTCCGAGCTCGCCGCAATACGGAATCAGCGACCGGATCTCTTCTCCTTCGTGCAGATTCAGTCGTCAGATCTCCTCGCCTCCTAATAAATACTTCGTCGGACCGCGAAACTGCCATGGAAGAACCTGTTGCCATGGGAGCCCTAGGTTTTTGTACTCCAGCCCCCACTGTGCTCACGGGAACTGA

Protein sequence

MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGSTVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISPPSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRTCCHGSPRFLYSSPHCAHGN

Homology

[Close]

BLAST of Carg10315 vs. NCBI nr
Match: KAG7023097.1 (hypothetical protein SDJN02_14121 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.1 bits (1050), Expect = 2.2e-110
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60
           MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS
Sbjct: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60

Query: 61  TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 120
           TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP
Sbjct: 61  TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 120

Query: 121 PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 180
           PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT
Sbjct: 121 PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 180

Query: 181 CCHGSPRFLYSSPHCAHGN 200
           CCHGSPRFLYSSPHCAHGN
Sbjct: 181 CCHGSPRFLYSSPHCAHGN 199

[Close]

BLAST of Carg10315 vs. NCBI nr
Match: XP_022965038.1 (uncharacterized protein LOC111464983 [Cucurbita moschata])

HSP 1 Score: 409.1 bits (1050), Expect = 2.2e-110
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60
           MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS
Sbjct: 52  MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 111

Query: 61  TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 120
           TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP
Sbjct: 112 TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 171

Query: 121 PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 180
           PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT
Sbjct: 172 PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 231

Query: 181 CCHGSPRFLYSSPHCAHGN 200
           CCHGSPRFLYSSPHCAHGN
Sbjct: 232 CCHGSPRFLYSSPHCAHGN 250

[Close]

BLAST of Carg10315 vs. NCBI nr
Match: XP_023515548.1 (uncharacterized protein LOC111779672 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.1 bits (1037), Expect = 7.2e-109
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60
           MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS
Sbjct: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60

Query: 61  TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 120
           TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP
Sbjct: 61  TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 120

Query: 121 PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 180
           PSSVDFTLPNSPCHGVDSLPSSPQYGI+DRISSPSCRFSRQISSPPNKYFVGPRNCHGRT
Sbjct: 121 PSSVDFTLPNSPCHGVDSLPSSPQYGINDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 180

Query: 181 CCHGSPRFLYSSPHCAHGN 200
           C HGSPRFLYSSPHCAHGN
Sbjct: 181 CSHGSPRFLYSSPHCAHGN 199

[Close]

BLAST of Carg10315 vs. NCBI nr
Match: XP_022987245.1 (uncharacterized protein LOC111484856 [Cucurbita maxima])

HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108
Identity = 196/199 (98.49%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60
           MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS
Sbjct: 58  MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 117

Query: 61  TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 120
           TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP
Sbjct: 118 TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 177

Query: 121 PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 180
           PSSVDFTLPNSPCHGVDSLPSSPQYG++DRISSPSCRFSRQISSPPNKYFVGPRNCHGRT
Sbjct: 178 PSSVDFTLPNSPCHGVDSLPSSPQYGVNDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 237

Query: 181 CCHGSPRFLYSSPHCAHGN 200
           CCHGSPRFLYSSPH AHGN
Sbjct: 238 CCHGSPRFLYSSPHYAHGN 256

[Close]

BLAST of Carg10315 vs. NCBI nr
Match: XP_038878416.1 (uncharacterized protein LOC120070656 [Benincasa hispida])

HSP 1 Score: 360.9 bits (925), Expect = 7.0e-96
Identity = 176/202 (87.13%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MRSDA---RTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEF 60
           MRSD+   R+GTLKFLCSYGGKILPR+TDGKLRYVGGLTRVLAV+RS+S+SELMVKLGEF
Sbjct: 1   MRSDSRNGRSGTLKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVERSISFSELMVKLGEF 60

Query: 61  CGSTVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQ 120
           CGS+VTLKCQLPGGDLETLISV SDEDLANIVEEYDRASSSL HPL+IRAILSPPKSLK+
Sbjct: 61  CGSSVTLKCQLPGGDLETLISVTSDEDLANIVEEYDRASSSLLHPLKIRAILSPPKSLKK 120

Query: 121 ISPPSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCH 180
           ISPPSSVD TLPNSPC+GVDSLPSSPQYGI++RISSPS RF RQI SPP+KYFVGPRNCH
Sbjct: 121 ISPPSSVDSTLPNSPCYGVDSLPSSPQYGINERISSPSYRFIRQIPSPPSKYFVGPRNCH 180

Query: 181 GRTCCHGSPRFLYSSPHCAHGN 200
           GRTCCHGSPRFLY+ PHC H N
Sbjct: 181 GRTCCHGSPRFLYTGPHCTHWN 202

[Close]

BLAST of Carg10315 vs. ExPASy TrEMBL
Match: A0A6J1HMN8 (uncharacterized protein LOC111464983 OS=Cucurbita moschata OX=3662 GN=LOC111464983 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.1e-110
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60
           MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS
Sbjct: 52  MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 111

Query: 61  TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 120
           TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP
Sbjct: 112 TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 171

Query: 121 PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 180
           PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT
Sbjct: 172 PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 231

Query: 181 CCHGSPRFLYSSPHCAHGN 200
           CCHGSPRFLYSSPHCAHGN
Sbjct: 232 CCHGSPRFLYSSPHCAHGN 250

[Close]

BLAST of Carg10315 vs. ExPASy TrEMBL
Match: A0A6J1JGA5 (uncharacterized protein LOC111484856 OS=Cucurbita maxima OX=3661 GN=LOC111484856 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 5.9e-109
Identity = 196/199 (98.49%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60
           MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS
Sbjct: 58  MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 117

Query: 61  TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 120
           TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP
Sbjct: 118 TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISP 177

Query: 121 PSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 180
           PSSVDFTLPNSPCHGVDSLPSSPQYG++DRISSPSCRFSRQISSPPNKYFVGPRNCHGRT
Sbjct: 178 PSSVDFTLPNSPCHGVDSLPSSPQYGVNDRISSPSCRFSRQISSPPNKYFVGPRNCHGRT 237

Query: 181 CCHGSPRFLYSSPHCAHGN 200
           CCHGSPRFLYSSPH AHGN
Sbjct: 238 CCHGSPRFLYSSPHYAHGN 256

[Close]

BLAST of Carg10315 vs. ExPASy TrEMBL
Match: A0A5D3BH99 (Octicosapeptide/Phox/Bem1p family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00990 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.5e-96
Identity = 178/202 (88.12%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MRSDAR---TGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEF 60
           MRS AR   +GTLKFLCSYGGKILPR+TDGKLRYVGGLTRVLAV+RSVS+SELMVKLGEF
Sbjct: 1   MRSGARNGSSGTLKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVERSVSFSELMVKLGEF 60

Query: 61  CGSTVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQ 120
           CGS+VTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPL+IRAILSPPKSLKQ
Sbjct: 61  CGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLKIRAILSPPKSLKQ 120

Query: 121 ISPPSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCH 180
           ISPPSSVD TLPNSPC+G DSLPSSPQYG S+RISSPS RF R+I SPP+KYFVGPRNCH
Sbjct: 121 ISPPSSVDSTLPNSPCYGADSLPSSPQYGNSERISSPSYRFIRRIPSPPSKYFVGPRNCH 180

Query: 181 GRTCCHGSPRFLYSSPHCAHGN 200
           GRTCCHGSPRFLYS P+C H N
Sbjct: 181 GRTCCHGSPRFLYSGPNCTHWN 202

[Close]

BLAST of Carg10315 vs. ExPASy TrEMBL
Match: A0A0A0LNT0 (PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002940 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.5e-96
Identity = 178/202 (88.12%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MRSDAR---TGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEF 60
           MRS AR   +GTLKFLCSYGGKILPR+TDGKLRYVGGLTRVLAV+RSVS+SELMVKLGEF
Sbjct: 1   MRSGARNGTSGTLKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVERSVSFSELMVKLGEF 60

Query: 61  CGSTVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQ 120
           CGS+VTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPL+IRAILSPPKSLKQ
Sbjct: 61  CGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLKIRAILSPPKSLKQ 120

Query: 121 ISPPSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCH 180
           ISPPSSVD TLPNSPC+G DSLPSSPQYG S+RISSPS RF R+I SPP+KYFVGPRNCH
Sbjct: 121 ISPPSSVDSTLPNSPCYGADSLPSSPQYGNSERISSPSYRFIRRIPSPPSKYFVGPRNCH 180

Query: 181 GRTCCHGSPRFLYSSPHCAHGN 200
           GRTCCHGSPRFLYS P+C H N
Sbjct: 181 GRTCCHGSPRFLYSGPNCTHWN 202

[Close]

BLAST of Carg10315 vs. ExPASy TrEMBL
Match: A0A1S3CLS3 (uncharacterized protein LOC103502365 OS=Cucumis melo OX=3656 GN=LOC103502365 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.5e-96
Identity = 178/202 (88.12%), Postives = 189/202 (93.56%), Query Frame = 0


Query: 1   MRSDAR---TGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEF 60
           MRS AR   +GTLKFLCSYGGKILPR+TDGKLRYVGGLTRVLAV+RSVS+SELMVKLGEF
Sbjct: 1   MRSGARNGSSGTLKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVERSVSFSELMVKLGEF 60

Query: 61  CGSTVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQ 120
           CGS+VTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPL+IRAILSPPKSLKQ
Sbjct: 61  CGSSVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLKIRAILSPPKSLKQ 120

Query: 121 ISPPSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCH 180
           ISPPSSVD TLPNSPC+G DSLPSSPQYG S+RISSPS RF R+I SPP+KYFVGPRNCH
Sbjct: 121 ISPPSSVDSTLPNSPCYGADSLPSSPQYGNSERISSPSYRFIRRIPSPPSKYFVGPRNCH 180

Query: 181 GRTCCHGSPRFLYSSPHCAHGN 200
           GRTCCHGSPRFLYS P+C H N
Sbjct: 181 GRTCCHGSPRFLYSGPNCTHWN 202

[Close]

BLAST of Carg10315 vs. TAIR 10
Match: AT5G63130.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 97/176 (55.11%), Postives = 116/176 (65.91%), Query Frame = 0


Query: 9   TLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGSTVTLKCQL 68
           +LKFLCSYGG+ILPR TDGKLRYVGG TRVL+VDRS+S+SELM KL EFCG +V L+CQL
Sbjct: 14  SLKFLCSYGGRILPRSTDGKLRYVGGHTRVLSVDRSISFSELMKKLYEFCGYSVDLRCQL 73

Query: 69  PGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSL-KQISPPSSVDFT 128
           P GDLETLISV+S+E+LA IVEEYDR   +     +IRA+LSPP+S  K  S PSS    
Sbjct: 74  PNGDLETLISVKSEEELAEIVEEYDRICGA-----KIRAVLSPPRSSHKTESSPSSSGDR 133

Query: 129 LPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVGPRNCHGRTCCH 184
            P SP     S P+SP       + S  C  S  +  PP +Y       H   CC+
Sbjct: 134 SPKSPFSVTPSPPNSPSPAYGRYLQSRYCLPSTDL--PPRRYIQRAEESH---CCY 179

[Close]

BLAST of Carg10315 vs. TAIR 10
Match: AT3G48240.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-38
Identity = 88/150 (58.67%), Postives = 104/150 (69.33%), Query Frame = 0


Query: 9   TLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGSTVTLKCQL 68
           +LKFLCSYGG+ILPR  DGKLRYVGG TRVL+V  S+S++EL +KL EFCG +V LKCQL
Sbjct: 13  SLKFLCSYGGRILPRSIDGKLRYVGGFTRVLSVHHSISFTELTMKLEEFCGYSVELKCQL 72

Query: 69  PGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSLKQISPPSSVDFTL 128
           P GDLETLISV+SDEDL NIVEEYDR         +IRAILSPPK +   S     D + 
Sbjct: 73  PNGDLETLISVKSDEDLVNIVEEYDRVYGG-----KIRAILSPPKQMSPRSSGGGGDLS- 132

Query: 129 PNSPCHGVDSLPSSPQYGISDRISSPSCRF 159
           P SP   V S PS P+Y ++    +   RF
Sbjct: 133 PKSPFSVVAS-PSPPRYCVAPPTENLLSRF 155

[Close]

BLAST of Carg10315 vs. TAIR 10
Match: AT3G26510.3 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-35
Identity = 92/198 (46.46%), Postives = 114/198 (57.58%), Query Frame = 0


Query: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60
           M +     T+KFLCSYGGKILPR  DGKLRY GG TRVLAV RSVS+SEL  K+ E CG 
Sbjct: 1   MVTSPTNSTIKFLCSYGGKILPRYPDGKLRYNGGHTRVLAVPRSVSFSELASKMAEMCGG 60

Query: 61  -----TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSL 120
                TVT++CQLP  DL+ L+S+ SDEDL N++EEYD  SS  S P++IR  L+PPKS 
Sbjct: 61  VGGSITVTIRCQLPTEDLDALVSITSDEDLVNLIEEYDLVSS--SSPMKIRVFLNPPKSA 120

Query: 121 ---KQISPPSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVG 180
              K+  PP ++  +   S      S  SSP+        SPS        SPP    V 
Sbjct: 121 AGSKKSPPPLALPSSTTTSSSSTTSSTSSSPR--------SPSLSKPPLPPSPPRITTVT 180

Query: 181 PRNCHGRTCCHGSPRFLY 191
              C+G    H + R +Y
Sbjct: 181 KNPCYG-CYVHRNSRNIY 187

[Close]

BLAST of Carg10315 vs. TAIR 10
Match: AT3G26510.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-35
Identity = 92/198 (46.46%), Postives = 114/198 (57.58%), Query Frame = 0


Query: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60
           M +     T+KFLCSYGGKILPR  DGKLRY GG TRVLAV RSVS+SEL  K+ E CG 
Sbjct: 1   MVTSPTNSTIKFLCSYGGKILPRYPDGKLRYNGGHTRVLAVPRSVSFSELASKMAEMCGG 60

Query: 61  -----TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSL 120
                TVT++CQLP  DL+ L+S+ SDEDL N++EEYD  SS  S P++IR  L+PPKS 
Sbjct: 61  VGGSITVTIRCQLPTEDLDALVSITSDEDLVNLIEEYDLVSS--SSPMKIRVFLNPPKSA 120

Query: 121 ---KQISPPSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVG 180
              K+  PP ++  +   S      S  SSP+        SPS        SPP    V 
Sbjct: 121 AGSKKSPPPLALPSSTTTSSSSTTSSTSSSPR--------SPSLSKPPLPPSPPRITTVT 180

Query: 181 PRNCHGRTCCHGSPRFLY 191
              C+G    H + R +Y
Sbjct: 181 KNPCYG-CYVHRNSRNIY 187

[Close]

BLAST of Carg10315 vs. TAIR 10
Match: AT3G26510.2 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 146.4 bits (368), Expect = 2.5e-35
Identity = 92/198 (46.46%), Postives = 114/198 (57.58%), Query Frame = 0


Query: 1   MRSDARTGTLKFLCSYGGKILPRRTDGKLRYVGGLTRVLAVDRSVSYSELMVKLGEFCGS 60
           M +     T+KFLCSYGGKILPR  DGKLRY GG TRVLAV RSVS+SEL  K+ E CG 
Sbjct: 1   MVTSPTNSTIKFLCSYGGKILPRYPDGKLRYNGGHTRVLAVPRSVSFSELASKMAEMCGG 60

Query: 61  -----TVTLKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLQIRAILSPPKSL 120
                TVT++CQLP  DL+ L+S+ SDEDL N++EEYD  SS  S P++IR  L+PPKS 
Sbjct: 61  VGGSITVTIRCQLPTEDLDALVSITSDEDLVNLIEEYDLVSS--SSPMKIRVFLNPPKSA 120

Query: 121 ---KQISPPSSVDFTLPNSPCHGVDSLPSSPQYGISDRISSPSCRFSRQISSPPNKYFVG 180
              K+  PP ++  +   S      S  SSP+        SPS        SPP    V 
Sbjct: 121 AGSKKSPPPLALPSSTTTSSSSTTSSTSSSPR--------SPSLSKPPLPPSPPRITTVT 180

Query: 181 PRNCHGRTCCHGSPRFLY 191
              C+G    H + R +Y
Sbjct: 181 KNPCYG-CYVHRNSRNIY 187

The following BLAST results are available for this feature:

BLAST of Carg10315 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023097.1	2.2e-110	100.00	hypothetical protein SDJN02_14121 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022965038.1	2.2e-110	100.00	uncharacterized protein LOC111464983 [Cucurbita moschata]	[more]
XP_023515548.1	7.2e-109	98.99	uncharacterized protein LOC111779672 [Cucurbita pepo subsp. pepo]	[more]
XP_022987245.1	1.2e-108	98.49	uncharacterized protein LOC111484856 [Cucurbita maxima]	[more]
XP_038878416.1	7.0e-96	87.13	uncharacterized protein LOC120070656 [Benincasa hispida]	[more]

BLAST of Carg10315 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg10315 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HMN8	1.1e-110	100.00	uncharacterized protein LOC111464983 OS=Cucurbita moschata OX=3662 GN=LOC1114649...	[more]
A0A6J1JGA5	5.9e-109	98.49	uncharacterized protein LOC111484856 OS=Cucurbita maxima OX=3661 GN=LOC111484856...	[more]
A0A5D3BH99	7.5e-96	88.12	Octicosapeptide/Phox/Bem1p family protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A0A0LNT0	7.5e-96	88.12	PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002940 PE=4 SV...	[more]
A0A1S3CLS3	7.5e-96	88.12	uncharacterized protein LOC103502365 OS=Cucumis melo OX=3656 GN=LOC103502365 PE=...	[more]

BLAST of Carg10315 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63130.1	1.1e-41	55.11	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G48240.1	1.9e-38	58.67	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G26510.3	2.5e-35	46.46	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G26510.1	2.5e-35	46.46	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G26510.2	2.5e-35	46.46	Octicosapeptide/Phox/Bem1p family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000270	PB1 domain	SMART	SM00666	PB1_new	coord: 24..112 e-value: 6.1E-23 score: 92.2
IPR000270	PB1 domain	PFAM	PF00564	PB1	coord: 26..97 e-value: 3.0E-17 score: 62.3
None	No IPR available	GENE3D	3.10.20.90		coord: 28..109 e-value: 1.8E-11 score: 46.1
None	No IPR available	PANTHER	PTHR31066	OS05G0427100 PROTEIN-RELATED	coord: 5..196
None	No IPR available	PANTHER	PTHR31066:SF66	PB1 DOMAIN PROTEIN	coord: 5..196
None	No IPR available	CDD	cd06410	PB1_UP2	coord: 13..100 e-value: 1.07182E-39 score: 129.262
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 26..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10315-RA	Carg10315-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding