Carg09980 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGAGAGAGAGAGAGAGAAGGGGAAGGGGAAAGGGGGAGTTGAGTTTTGTGAAGAAGATGAAGATCACTGCGTTGCTGGTCTTGAAATGCCACCCAGAAGGATCTGATCCGATTATATTGGCCAACGCCGCTGATGTGAGTCATTTCGGTTACTTTCAGAGGCCCAGCGTTAGGGAGTTCATCTGCTTCGTTGGTCGGACCGTCGCTAAGCGTACCCCTCCTGACCAGCGTCAATCTGTTCAGCACGAAGGTCTATTCTTTTTTTCTTTATTCTATTTGTTAGTTCTCTGTTACGGTCATGTTCTGCCTTTATGCTTGCATTGTTGTGTTGGGATTCTTCCTTCTGATTGTGCATTTTTTTTTCTTCTTGCTTAATTGCTGTAATTGGAGTTTTGCTTTCGATTTTGGGGTTTTCCTTGTTTTTTTATTTTTATTTTTTATTTATCAATCTCATAATCAGGATTTTGTATGCTGATCAGATCATAGGAAGATAGAAAGTCCAATAGTTGGAGGGAACGTAGTATGATTGTAGTTTAGGCGAAAACGAACAGGATGTGGTGGAAATTCAAGTGACAAGAGGCAAAATGATACCCGAAGAGACGATAAAACCAAGAAATGCCCCATGATGATCCCCTTTCCACTTTTGGTTTAAGCGGGCGTCGACAGTCAGCTGAATGTTCTTGTGAAATCATTTTTGCCCTGTTAGTGTCTTTATGCAGTTAATTGCATATGGTTCATTCAATCTGAATCTGTATAGGGGATCTATTGAGTCTGGTCATTTATAGGAGAGGAATTTGTAACAACTTCAAATCTGAATTGTAGTGTAAGGTTTACGTAGAAGATTTTGATTTCTTACACTTCTTTTAGGTTTTGTTTTTTCTTATTTTGTTCAATAGGACAAATTGTCTTTCTTTCATGTTCTTCTCTACCTTTAAGTCACTGTTAAAGATGTTCTGCAATGCTGGTTTACCAGTTAATACCTGTCCAGCTTCAGCTATTAATTGTGTTCTACGTTATTGAATTTTCTACGAATCATTTGAAATTTTGTAGAGTATAAGGTGCATAGTTACAATAGAAATGGTCTTTGTGCTTTGGGATTTATGGATGACCACTACCCGGTTCGAAGTGCATTCTCTCTGCTTAACCAGGTGAAAATCACTCTTATTCACATCTAACAAATGTATTGCTGTAGAGCACTCTTTCTTTTCATGTAAAATTATGTTATTTTGTTGGATTTTGCATTGACGAGTTATTTTTCTTAAGAAAAAGACAAACTAATAGTCGGATTAGTGATTTCTGATTAAATAACTTCACTGGAACAATACTGCATCAGGCTCAAGTAATGTCAGCATCATATTGCAGTATGAAGATTAGTTTTATTCTCTTATTATAAATTTTCAATGATTATAGTACCGAATTATTATGATATGTGGATAAACCGAAGGTCATTGACTTGAGCTAATCTTAGTCCTAATCCATATACATAGCTATAATTTTATCCCTTTTTTAGTGTGTATATATATATATATATATATATATATGTATGTATGTATGTATGTATATTATCAAAGTAGTTTTTGTATTTTGTCTCTGTATGATTGTAACTATTGTTAATGCACGTTGGTTTCTACCAGGTTATGGACGAGTACCAAAAAATTTTTGGTGAAACATGGAGAACTGCACAAGCAGATAACTTTCAACCATGGCCCTATCTGACTGAAGCTTTAACCAAATTCCAGGTTTATTGCCCTCCTTTCTACATTTAATTAAGACATAATTGCATGACCGAATTTGAAACGTATTTACAGCCTTCATTCCCCCACCTCAACCAGTGATTATAACATTTTCTATTATTTACTGTCCAGGACCCTGCAGAGGCTGATAAATTGTTGAAAATACAGCGGGAGTTGGACGAAACCAAAATTATTCTTGTAAGTTCTTTTAATATATATCTTCCAGGGTTGTATGCTACATTGCTGTTTTCTGGTTGATTAATTTTCATGCTGATATGTTTCTATCTTCCAATACAGCATAAGACGATTGACAGCGTGCTTGAACGTGGTGAAAAGTTGGACAGTTTGGTCGAGAAGAGTTCTGATCTCAGTGCAGCATCCCAGGTATGCGATTGTACATAACTAGTAGAAAATAGTATGTGTTAGATTTCTGGTCCATGAGATGGTGTTACTTACTTGAATTCTTCTCAACTAATGTTACAACTACATTCATGAAGCATTTGACGTTTTTCCATTTCCTTAAGAACCTACCTAACTGTAGCGCACTTGTGATTGAACAGATGTTCTACAAACAAGCTAAAAAGACCAACCAGTGTTGTACCATACTGTAAGCTTTTGATGGCATCACATAGAAAGTTGAACCAGATAATTGATGATTGTAATATGATTATATCCTTCACAATTTGTTTGTTTCGCTGAATCTTGTGAATTTTATCCTCGTTTGTTGTTTAAAAGATGGGGGAACAAAATGTTGGGCGTAGATCCTACTCGTATAGTATATTGACGTCTCATTTTCTTCATTGGTGTTAGTTCACATATGCTTGTTTCCATTTTCAATGGAATGTTCATTATTGATCCCTCTTGATGTTAATCAATGCTGATAAATGTCGATCGAGTTACCTCTTGCAATCACATTTTTATTAGACGAGTTCGGATCTTACTAACAAGTTGTACTTATGATTGGTAAACCATGAGTGCGATTTAAAGCACGACCATACCGAGATACACACATAATATGTACTCACAAACCAACATTTTACACAACTGATGAGAAGAGTAGCAAGATAGGGTTCTGATGTTATAAACATAAGCTTCTGTGATCTGTTTACTTTCCCAGAAGAATGGACTTTATCCACCATATGCCTTTTGTATCTTTGGGACCTTCACCTTCTGGTGGAGGATCGCTCTGTGGTGTCTTGTGCAGTTTGTTTACATCATAACCCAATTCCTTGGCTTTTTCAAGCAGCTCATTGTATATCTCCTCGTTAAGATGAGTATTTCTGCACAATATCTGCACAATACACCAAAAAAACACCATCAGTATACAGAACCCACAATATGAAACTTTGGAATGAGAGAGTGAAATTTGAAAACATACCCAAAGATTCTTCCTTGAAGGCTCCCCAACCAGGACATACTGATAATCACCATCAATATACAAAACCCAGTAATTCCCAACAACTGGAATGATTGGAAGGAAGGGAGGCAAATAGAATTTGACCTTGAACTTGGCCTCCTGGCTTGAAGGCTCAGCCTTATAAGCCACACCTTCTATGGAACTTCTCTTGCCATCGCTCCAAGTTTCATTCACCACTTTCACAGTTCCATCTTCTTTTAGCGTATAAGTAGCCCTTGTGTTCACACCATTCTTTGGTTGATTTCTCGATGGAATTGAAGCTATCTCATACCATCTTCCCATGTACTTCTCAAGATCCAACCCTTTAACCACTTCCATATCTTTCTTTGCCATCGTTTCAAATGTGAAACAACACACAGAAATGTTGGTTTCTGGACAACATATTTGTAGAGACACAGGATTACTTGTGTGGATGCTTATCTATAAGGTCTTTTCAGCTGTCCCCATCTGGCCGAATGGCTGAGATGAAAGTAGAAACTTCCAGATGGGTGGTTTCTAGAACCCAACATTATTGCAG AGAGAGAGAGAGAGAGAGAAGGGGAAGGGGAAAGGGGGAGTTGAGTTTTGTGAAGAAGATGAAGATCACTGCGTTGCTGGTCTTGAAATGCCACCCAGAAGGATCTGATCCGATTATATTGGCCAACGCCGCTGATGTGAGTCATTTCGGTTACTTTCAGAGGCCCAGCGTTAGGGAGTTCATCTGCTTCGTTGGTCGGACCGTCGCTAAGCGTACCCCTCCTGACCAGCGTCAATCTGTTCAGCACGAAGAGTATAAGGTGCATAGTTACAATAGAAATGGTCTTTGTGCTTTGGGATTTATGGATGACCACTACCCGGTTCGAAGTGCATTCTCTCTGCTTAACCAGGTTATGGACGAGTACCAAAAAATTTTTGGTGAAACATGGAGAACTGCACAAGCAGATAACTTTCAACCATGGCCCTATCTGACTGAAGCTTTAACCAAATTCCAGGACCCTGCAGAGGCTGATAAATTGTTGAAAATACAGCGGGAGTTGGACGAAACCAAAATTATTCTTCATAAGACGATTGACAGCGTGCTTGAACGTGGTGAAAAGTTGGACAGTTTGGTCGAGAAGAGTTCTGATCTCAGTGCAGCATCCCAGATGTTCTACAAACAAGCTAAAAAGACCAACCAGTGTTGTACCATACTGTAAGCTTTTGATGGCATCACATAGAAAGTTGAACCAGATAATTGATGATTGTAATATGATTATATCCTTCACAATTTGTTTGTTTCGCTGAATCTTGTGAATTTTATCCTCGTTTGTTGTTTAAAAGATGGGGGAACAAAATGTTGGGCGTAGATCCTACTCGTATAGTATATTGACGTCTCATTTTCTTCATTGGTGTTAGTTCACATATGCTTGTTTCCATTTTCAATGGAATGTTCATTATTGATCCCTCTTGATGTTAATCAATGCTGATAAATGTCGATCGAGTTACCTCTTGCAATCACATTTTTATTAGACGAGTTCGGATCTTACTAACAAGTTGTACTTATGATTGGTAAACCATGAGTGCGATTTAAAGCACGACCATACCGAGATACACACATAATATGTACTCACAAACCAACATTTTACACAACTGATGAGAAGAGTAGCAAGATAGGGTTCTGATGTTATAAACATAAGCTTCTGTGATCTGTTTACTTTCCCAGAAGAATGGACTTTATCCACCATATGCCTTTTGTATCTTTGGGACCTTCACCTTCTGGTGGAGGATCGCTCTGTGGTGTCTTGTGCAGTTTGTTTACATCATAACCCAATTCCTTGGCTTTTTCAAGCAGCTCATTGTATATCTCCTCGTTAAGATGAAGTGAAATTTGAAAACATACCCAAAGATTCTTCCTTGAAGGCTCCCCAACCAGGACATACTGATAATCACCATCAATATACAAAACCCAGTAATTCCCAACAACTGGAATGATTGGAAGGAAGGGAGGCAAATAGAATTTGACCTTGAACTTGGCCTCCTGGCTTGAAGGCTCAGCCTTATAAGCCACACCTTCTATGGAACTTCTCTTGCCATCGCTCCAAGTTTCATTCACCACTTTCACAGTTCCATCTTCTTTTAGCGTATAAGTAGCCCTTGTGTTCACACCATTCTTTGGTTGATTTCTCGATGGAATTGAAGCTATCTCATACCATCTTCCCATGTACTTCTCAAGATCCAACCCTTTAACCACTTCCATATCTTTCTTTGCCATCGTTTCAAATGTGAAACAACACACAGAAATGTTGGTTTCTGGACAACATATTTGTAGAGACACAGGATTACTTGTGTGGATGCTTATCTATAAGGTCTTTTCAGCTGTCCCCATCTGGCCGAATGGCTGAGATGAAAGTAGAAACTTCCAGATGGGTGGTTTCTAGAACCCAACATTATTGCAG ATGAAGATCACTGCGTTGCTGGTCTTGAAATGCCACCCAGAAGGATCTGATCCGATTATATTGGCCAACGCCGCTGATGTGAGTCATTTCGGTTACTTTCAGAGGCCCAGCGTTAGGGAGTTCATCTGCTTCGTTGGTCGGACCGTCGCTAAGCGTACCCCTCCTGACCAGCGTCAATCTGTTCAGCACGAAGAGTATAAGGTGCATAGTTACAATAGAAATGGTCTTTGTGCTTTGGGATTTATGGATGACCACTACCCGGTTCGAAGTGCATTCTCTCTGCTTAACCAGGTTATGGACGAGTACCAAAAAATTTTTGGTGAAACATGGAGAACTGCACAAGCAGATAACTTTCAACCATGGCCCTATCTGACTGAAGCTTTAACCAAATTCCAGGACCCTGCAGAGGCTGATAAATTGTTGAAAATACAGCGGGAGTTGGACGAAACCAAAATTATTCTTCATAAGACGATTGACAGCGTGCTTGAACGTGGTGAAAAGTTGGACAGTTTGGTCGAGAAGAGTTCTGATCTCAGTGCAGCATCCCAGATGTTCTACAAACAAGCTAAAAAGACCAACCAGTGTTGTACCATACTGTAA MKITALLVLKCHPEGSDPIILANAADVSHFGYFQRPSVREFICFVGRTVAKRTPPDQRQSVQHEEYKVHSYNRNGLCALGFMDDHYPVRSAFSLLNQVMDEYQKIFGETWRTAQADNFQPWPYLTEALTKFQDPAEADKLLKIQRELDETKIILHKTIDSVLERGEKLDSLVEKSSDLSAASQMFYKQAKKTNQCCTIL Homology
BLAST of Carg09980 vs. NCBI nr
Match: KAG7023458.1 (VAMP-like protein YKT61 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 406.8 bits (1044), Expect = 1.1e-109 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of Carg09980 vs. NCBI nr
Match: XP_022921839.1 (VAMP-like protein YKT61 [Cucurbita moschata] >XP_022987991.1 VAMP-like protein YKT61 [Cucurbita maxima] >XP_023516758.1 VAMP-like protein YKT61 [Cucurbita pepo subsp. pepo] >KAG6589785.1 VAMP-like protein YKT61, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 404.1 bits (1037), Expect = 7.2e-109 Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Carg09980 vs. NCBI nr
Match: XP_038879663.1 (VAMP-like protein YKT61 [Benincasa hispida]) HSP 1 Score: 394.4 bits (1012), Expect = 5.7e-106 Identity = 192/199 (96.48%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of Carg09980 vs. NCBI nr
Match: XP_008443877.1 (PREDICTED: VAMP-like protein YKT61 [Cucumis melo]) HSP 1 Score: 389.0 bits (998), Expect = 2.4e-104 Identity = 190/199 (95.48%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Carg09980 vs. NCBI nr
Match: XP_022932687.1 (VAMP-like protein YKT61 [Cucurbita moschata] >KAG6587838.1 VAMP-like protein YKT61, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035668.1 VAMP-like protein YKT61 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 387.9 bits (995), Expect = 5.3e-104 Identity = 189/199 (94.97%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of Carg09980 vs. ExPASy Swiss-Prot
Match: Q9ZRD6 (VAMP-like protein YKT61 OS=Arabidopsis thaliana OX=3702 GN=YKT61 PE=2 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 2.7e-98 Identity = 174/199 (87.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of Carg09980 vs. ExPASy Swiss-Prot
Match: Q9LVM9 (VAMP-like protein YKT62 OS=Arabidopsis thaliana OX=3702 GN=YKT62 PE=3 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 6.0e-82 Identity = 152/201 (75.62%), Postives = 170/201 (84.58%), Query Frame = 0
BLAST of Carg09980 vs. ExPASy Swiss-Prot
Match: Q757A4 (Synaptobrevin homolog YKT6 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=YKT6 PE=3 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 8.1e-47 Identity = 101/202 (50.00%), Postives = 139/202 (68.81%), Query Frame = 0
BLAST of Carg09980 vs. ExPASy Swiss-Prot
Match: Q6FW27 (Synaptobrevin homolog YKT6 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=YKT6 PE=3 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 9.9e-45 Identity = 99/205 (48.29%), Postives = 137/205 (66.83%), Query Frame = 0
BLAST of Carg09980 vs. ExPASy Swiss-Prot
Match: Q6BSL0 (Synaptobrevin homolog YKT6 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=YKT6 PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.4e-43 Identity = 93/202 (46.04%), Postives = 136/202 (67.33%), Query Frame = 0
BLAST of Carg09980 vs. ExPASy TrEMBL
Match: A0A6J1JFX8 (VAMP-like protein YKT61 OS=Cucurbita maxima OX=3661 GN=LOC111485368 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 3.5e-109 Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Carg09980 vs. ExPASy TrEMBL
Match: A0A6J1E1N9 (VAMP-like protein YKT61 OS=Cucurbita moschata OX=3662 GN=LOC111429979 PE=3 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 3.5e-109 Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0
BLAST of Carg09980 vs. ExPASy TrEMBL
Match: A0A1S3B9V7 (VAMP-like protein YKT61 OS=Cucumis melo OX=3656 GN=LOC103487367 PE=3 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.2e-104 Identity = 190/199 (95.48%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of Carg09980 vs. ExPASy TrEMBL
Match: A0A6J1EXG6 (VAMP-like protein YKT61 OS=Cucurbita moschata OX=3662 GN=LOC111439157 PE=3 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 2.6e-104 Identity = 189/199 (94.97%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of Carg09980 vs. ExPASy TrEMBL
Match: A0A6J1KWH7 (VAMP-like protein YKT61 OS=Cucurbita maxima OX=3661 GN=LOC111498835 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 5.7e-104 Identity = 188/199 (94.47%), Postives = 193/199 (96.98%), Query Frame = 0
BLAST of Carg09980 vs. TAIR 10
Match: AT5G58060.1 (SNARE-like superfamily protein ) HSP 1 Score: 359.4 bits (921), Expect = 1.9e-99 Identity = 174/199 (87.44%), Postives = 186/199 (93.47%), Query Frame = 0
BLAST of Carg09980 vs. TAIR 10
Match: AT5G58060.2 (SNARE-like superfamily protein ) HSP 1 Score: 338.2 bits (866), Expect = 4.5e-93 Identity = 171/221 (77.38%), Postives = 183/221 (82.81%), Query Frame = 0
BLAST of Carg09980 vs. TAIR 10
Match: AT5G58180.1 (Synaptobrevin family protein ) HSP 1 Score: 305.1 bits (780), Expect = 4.2e-83 Identity = 152/201 (75.62%), Postives = 170/201 (84.58%), Query Frame = 0
BLAST of Carg09980 vs. TAIR 10
Match: AT5G58180.2 (Synaptobrevin family protein ) HSP 1 Score: 305.1 bits (780), Expect = 4.2e-83 Identity = 152/201 (75.62%), Postives = 170/201 (84.58%), Query Frame = 0
BLAST of Carg09980 vs. TAIR 10
Match: AT2G25340.1 (vesicle-associated membrane protein 712 ) HSP 1 Score: 63.2 bits (152), Expect = 2.8e-10 Identity = 37/142 (26.06%), Postives = 72/142 (50.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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