Carg09927 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09927
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cucumber peeling cupredoxin-like
Location	Carg_Chr10: 2506940 .. 2507496 (-)
RNA-Seq Expression	Carg09927
Synteny	Carg09927

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCAACAAGATCGAGCTTCCTTGCTTCCCTCCTCTTCATTGGGGCTCTCCTCCATGCTGCTGCCGCCGTCGACCACCGTGTCGGAGGCGATTTTGGTTGGAACCTACCGCCAACACCCACCTTCTTCTCTGAATGGGCTACCAATATCACTTTCTCTGTGGGCGATACACTAAGTAAATATCCATACTTGTTAAGCTCATTCATAATTGTTTATGTTCCATAAGTACTGAAATAAATGGGGGGTTTTGTGTAGGGTTCAATTCAAGTGCCAATCAAACCCACAACTACGCCATGCCCGAGTCTCAAGCAGAGTTTGATGGATGTGTGAAGCCAGGAATATTTTTCGAGAATGTAATTTTTGTTACCTTTGATCGTCCTGGTCGTAAATACTTTATCTGTAATGTTGGCAACCACTGCAATTTGGGCATGAAATTTGCCGTCGACGTTTTGCCTAGCCCTGGAATGCCGCCCAACTCTGCTCTCAAAATTGGTGCAGTTCCTACCCTGTTCATGATCACCACCATCCTGCCCAATTTGTTGTTCTTCATTTGA

mRNA sequence

ATGGGTTCAACAAGATCGAGCTTCCTTGCTTCCCTCCTCTTCATTGGGGCTCTCCTCCATGCTGCTGCCGCCGTCGACCACCGTGTCGGAGGCGATTTTGGTTGGAACCTACCGCCAACACCCACCTTCTTCTCTGAATGGGCTACCAATATCACTTTCTCTGTGGGCGATACACTAAGGTTCAATTCAAGTGCCAATCAAACCCACAACTACGCCATGCCCGAGTCTCAAGCAGAGTTTGATGGATGTGTGAAGCCAGGAATATTTTTCGAGAATGTAATTTTTGTTACCTTTGATCGTCCTGGTCGTAAATACTTTATCTGTAATGTTGGCAACCACTGCAATTTGGGCATGAAATTTGCCGTCGACGTTTTGCCTAGCCCTGGAATGCCGCCCAACTCTGCTCTCAAAATTGGTGCAGTTCCTACCCTGTTCATGATCACCACCATCCTGCCCAATTTGTTGTTCTTCATTTGA

Coding sequence (CDS)

ATGGGTTCAACAAGATCGAGCTTCCTTGCTTCCCTCCTCTTCATTGGGGCTCTCCTCCATGCTGCTGCCGCCGTCGACCACCGTGTCGGAGGCGATTTTGGTTGGAACCTACCGCCAACACCCACCTTCTTCTCTGAATGGGCTACCAATATCACTTTCTCTGTGGGCGATACACTAAGGTTCAATTCAAGTGCCAATCAAACCCACAACTACGCCATGCCCGAGTCTCAAGCAGAGTTTGATGGATGTGTGAAGCCAGGAATATTTTTCGAGAATGTAATTTTTGTTACCTTTGATCGTCCTGGTCGTAAATACTTTATCTGTAATGTTGGCAACCACTGCAATTTGGGCATGAAATTTGCCGTCGACGTTTTGCCTAGCCCTGGAATGCCGCCCAACTCTGCTCTCAAAATTGGTGCAGTTCCTACCCTGTTCATGATCACCACCATCCTGCCCAATTTGTTGTTCTTCATTTGA

Protein sequence

MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKFAVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI

Homology

[Close]

BLAST of Carg09927 vs. NCBI nr
Match: KAG7023509.1 (hypothetical protein SDJN02_14535, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327.0 bits (837), Expect = 8.9e-86
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR
Sbjct: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF
Sbjct: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120

Query: 121 AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI 159
           AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI
Sbjct: 121 AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI 158

[Close]

BLAST of Carg09927 vs. NCBI nr
Match: KAG6589838.1 (hypothetical protein SDJN03_15261, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325.1 bits (832), Expect = 3.4e-85
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATN TFSVGDTLR
Sbjct: 21  MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNTTFSVGDTLR 80

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF
Sbjct: 81  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 140

Query: 121 AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI 159
           AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI
Sbjct: 141 AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI 178

[Close]

BLAST of Carg09927 vs. NCBI nr
Match: XP_022960663.1 (umecyanin-like [Cucurbita moschata])

HSP 1 Score: 325.1 bits (832), Expect = 3.4e-85
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATN TFSVGDTLR
Sbjct: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNTTFSVGDTLR 60

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF
Sbjct: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120

Query: 121 AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI 159
           AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI
Sbjct: 121 AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI 158

[Close]

BLAST of Carg09927 vs. NCBI nr
Match: XP_023516867.1 (umecyanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299.3 bits (765), Expect = 2.0e-77
Identity = 144/157 (91.72%), Postives = 147/157 (93.63%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           M STRSSFLASLLFIGALL AAAA+DHRVGGDFGWNLPPTPTFFSEWATN TFSVGDTLR
Sbjct: 1   MASTRSSFLASLLFIGALLQAAAAIDHRVGGDFGWNLPPTPTFFSEWATNTTFSVGDTLR 60

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSANQTHNYAMPESQ EFDGCVKPG+FFENVIFVTFDRPGRKYFICNVGNHCNLGMKF
Sbjct: 61  FNSSANQTHNYAMPESQPEFDGCVKPGLFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120

Query: 121 AVDVLPSPGMPPNSALKIGAVPTLFMI-TTILPNLLF 157
           AVDVLP+PGMPPNSALKIGA PTLF I T  LPN LF
Sbjct: 121 AVDVLPNPGMPPNSALKIGAFPTLFFIATAFLPNFLF 157

[Close]

BLAST of Carg09927 vs. NCBI nr
Match: XP_022987885.1 (cucumber peeling cupredoxin-like [Cucurbita maxima])

HSP 1 Score: 294.3 bits (752), Expect = 6.4e-76
Identity = 146/162 (90.12%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLH---AAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGD 60
           MGSTRSSFLASLLFIGALL    AAAAVDHRVGGDFGWNLPPTPTFFSEWA+N +FSVGD
Sbjct: 22  MGSTRSSFLASLLFIGALLQAAAAAAAVDHRVGGDFGWNLPPTPTFFSEWASNTSFSVGD 81

Query: 61  TLRFNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLG 120
           TLRFNSSANQTHNY MPESQAEFDGCVKPGIFFENVIFVTFDRP RKYFICNVGNHC LG
Sbjct: 82  TLRFNSSANQTHNYGMPESQAEFDGCVKPGIFFENVIFVTFDRPARKYFICNVGNHCKLG 141

Query: 121 MKFAVDVLPSPGMPPNSALKIGAVPTLFMI-TTILPNLLFFI 159
           MKFAVDVLP+PGMPPNSALKIGA PTLF I T ILPN LFFI
Sbjct: 142 MKFAVDVLPNPGMPPNSALKIGAFPTLFFIATAILPNFLFFI 183

[Close]

BLAST of Carg09927 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 85.1 bits (209), Expect = 7.7e-16
Identity = 44/129 (34.11%), Postives = 66/129 (51.16%), Query Frame = 0


Query: 27  HRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGC--- 86
           H VG + GW++P +P F+S+WA   TF VGD+L+FN  AN  HN    E++  FD C   
Sbjct: 5   HIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPAN-AHNVHEMETKQSFDACNFV 64

Query: 87  -VKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKFAVDVL---------PSPGMPPN 143
                +   + +    D  G  YF+C VG HC+ G K +++V+         P    PP+
Sbjct: 65  NSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPPPSSSPPS 124

[Close]

BLAST of Carg09927 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 9.4e-14
Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 3   STRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFN 62
           ++R   +   +    L+    A DH +GG  GW +  +      WA   TF+VGD L F+
Sbjct: 2   ASREMLIIISVLATTLIGLTVATDHTIGGPSGWTVGAS---LRTWAAGQTFAVGDNLVFS 61

Query: 63  SSANQTHNYAMPESQAEFDGC--VKPGIFFEN-VIFVTFDRPGRKYFICNVGNHCNLGMK 122
             A    +  +  ++ EFD C  VKP I F N    V    PG++YFIC +  HC+ GMK
Sbjct: 62  YPA--AFHDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMK 121

Query: 123 FAVDVLPSPGMPPNSALKIGAVPTL 145
             V+V+P+  + P + L    VP+L
Sbjct: 122 LEVNVVPTATVAPTAPLP-NTVPSL 140

[Close]

BLAST of Carg09927 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-13
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 26  DHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGCVK 85
           D+ VGGD  W  P  P F+  WAT  TF VGD L F+ +A   H+ A+    A FD C K
Sbjct: 2   DYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGM-HDVAVVTKDA-FDNCKK 61

Query: 86  PGIFFENV---IFVTFDRPGRKYFICNVGNHCNLGMKFAVDVLPSPG 130
                      + +  +  G +Y+IC VG+HC +G K +++V+ + G
Sbjct: 62  ENPISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGG 106

[Close]

BLAST of Carg09927 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-12
Identity = 43/122 (35.25%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 24  AVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGC 83
           A D+ VG D  W  P  P F++ WAT  TF VGD L F+ +A + H+ A+  S+A F+ C
Sbjct: 22  AEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGR-HDVAV-VSEAAFENC 81

Query: 84  VKPGIFFENV---IFVTFDRPGRKYFICNVGNHCNLGMKFAVDVLPSPGMPPNSALKIGA 143
            K           + +  +  G +YFIC VG+HC  G K ++ V+ + G    +    GA
Sbjct: 82  EKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV-AAGATGGATPGAGA 140

[Close]

BLAST of Carg09927 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 7.0e-09
Identity = 35/106 (33.02%), Postives = 51/106 (48.11%), Query Frame = 0


Query: 24  AVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGC 83
           A  H+VG   GW     P  +++WA++  F VGD+L FN + N+ HN  +   Q +F  C
Sbjct: 1   ATVHKVGDSTGWT-TLVPYDYAKWASSNKFHVGDSLLFNYN-NKFHN-VLQVDQEQFKSC 60

Query: 84  ---VKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKFAVDVLP 127
                   +      +   RPG  YF+C +  HC LG K  + V P
Sbjct: 61  NSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 103

[Close]

BLAST of Carg09927 vs. ExPASy TrEMBL
Match: A0A6J1H9M4 (umecyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111461385 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.6e-85
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATN TFSVGDTLR
Sbjct: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNTTFSVGDTLR 60

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF
Sbjct: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120

Query: 121 AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI 159
           AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI
Sbjct: 121 AVDVLPSPGMPPNSALKIGAVPTLFMITTILPNLLFFI 158

[Close]

BLAST of Carg09927 vs. ExPASy TrEMBL
Match: A0A6J1JI19 (cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111485291 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.1e-76
Identity = 146/162 (90.12%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLH---AAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGD 60
           MGSTRSSFLASLLFIGALL    AAAAVDHRVGGDFGWNLPPTPTFFSEWA+N +FSVGD
Sbjct: 22  MGSTRSSFLASLLFIGALLQAAAAAAAVDHRVGGDFGWNLPPTPTFFSEWASNTSFSVGD 81

Query: 61  TLRFNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLG 120
           TLRFNSSANQTHNY MPESQAEFDGCVKPGIFFENVIFVTFDRP RKYFICNVGNHC LG
Sbjct: 82  TLRFNSSANQTHNYGMPESQAEFDGCVKPGIFFENVIFVTFDRPARKYFICNVGNHCKLG 141

Query: 121 MKFAVDVLPSPGMPPNSALKIGAVPTLFMI-TTILPNLLFFI 159
           MKFAVDVLP+PGMPPNSALKIGA PTLF I T ILPN LFFI
Sbjct: 142 MKFAVDVLPNPGMPPNSALKIGAFPTLFFIATAILPNFLFFI 183

[Close]

BLAST of Carg09927 vs. ExPASy TrEMBL
Match: A0A5D3C3B4 (Umecyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001000 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.5e-58
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           + + + +FLAS LFI  LL A AA+D++VGGDFGWNLPPTPTFFSEWA+N TF VGDTLR
Sbjct: 2   VSTQKLTFLASFLFIAVLLPAVAAIDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDTLR 61

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSAN+THNYAMP SQAE DGCVKPGI F   ++   DRPGRKYFIC VGNHCNLGMKF
Sbjct: 62  FNSSANETHNYAMPGSQAELDGCVKPGIVFMGGVYPVLDRPGRKYFICEVGNHCNLGMKF 121

Query: 121 AVDVLPSPG-MPPNSALKIGAVPTLFMI-TTILPNLLFFI 159
           AVDV+P PG MPPN+ALK+ A P L +I  TI+ N LFFI
Sbjct: 122 AVDVMPIPGSMPPNAALKLDAFPMLLLIFITIIINFLFFI 161

[Close]

BLAST of Carg09927 vs. ExPASy TrEMBL
Match: A0A1S3B9D0 (umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487432 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 6.5e-58
Identity = 114/160 (71.25%), Postives = 130/160 (81.25%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           + + + +FLAS LFI  LL A AA+D++VGGDFGWNLPPTPTFFSEWA+N TF VGDTLR
Sbjct: 2   VSTQKLTFLASFLFIAVLLPAVAAIDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDTLR 61

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSAN+THNYAMP SQAE DGCVKPGI F   ++   DRPGRKYFIC VGNHCNLGMKF
Sbjct: 62  FNSSANETHNYAMPGSQAELDGCVKPGIVFMGGVYPVLDRPGRKYFICEVGNHCNLGMKF 121

Query: 121 AVDVLPSPG-MPPNSALKIGAVPTLFMI-TTILPNLLFFI 159
           AVDV+P PG MPPN+ALK+ A P L +I  TI+ N LFFI
Sbjct: 122 AVDVMPIPGSMPPNAALKLDAFPMLLLIFITIIINFLFFI 161

[Close]

BLAST of Carg09927 vs. ExPASy TrEMBL
Match: A0A0A0LZE7 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G348950 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 2.1e-56
Identity = 110/159 (69.18%), Postives = 126/159 (79.25%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           + + + +FLAS LFI  LL A AAVD++VGGDFGWNLPPTPTFFSEWA+N TF VGD LR
Sbjct: 2   VSTQKVTFLASFLFIAVLLPAVAAVDYQVGGDFGWNLPPTPTFFSEWASNKTFFVGDRLR 61

Query: 61  FNSSANQTHNYAMPESQAEFDGCVKPGIFFENVIFVTFDRPGRKYFICNVGNHCNLGMKF 120
           FNSSAN+THNYAMP SQAE DGCVKPGI F   +F   DRPGR+YFIC VGNHCNLGMKF
Sbjct: 62  FNSSANETHNYAMPGSQAELDGCVKPGIVFVGNVFPVLDRPGRRYFICEVGNHCNLGMKF 121

Query: 121 AVDVLPSPG-MPPNSALKIGAVPTLFMITTILPNLLFFI 159
           A+DV+P  G MPPN+ALKI A P L +  T++ N LF I
Sbjct: 122 AIDVMPILGSMPPNAALKIDAFPMLLLFITMITNFLFII 160

[Close]

BLAST of Carg09927 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 78.2 bits (191), Expect = 6.7e-15
Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 3   STRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFN 62
           ++R   +   +    L+    A DH +GG  GW +  +      WA   TF+VGD L F+
Sbjct: 2   ASREMLIIISVLATTLIGLTVATDHTIGGPSGWTVGAS---LRTWAAGQTFAVGDNLVFS 61

Query: 63  SSANQTHNYAMPESQAEFDGC--VKPGIFFEN-VIFVTFDRPGRKYFICNVGNHCNLGMK 122
             A    +  +  ++ EFD C  VKP I F N    V    PG++YFIC +  HC+ GMK
Sbjct: 62  YPA--AFHDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMK 121

Query: 123 FAVDVLPSPGMPPNSALKIGAVPTL 145
             V+V+P+  + P + L    VP+L
Sbjct: 122 LEVNVVPTATVAPTAPLP-NTVPSL 140

[Close]

BLAST of Carg09927 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein )

HSP 1 Score: 74.7 bits (182), Expect = 7.4e-14
Identity = 43/122 (35.25%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 24  AVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLRFNSSANQTHNYAMPESQAEFDGC 83
           A D+ VG D  W  P  P F++ WAT  TF VGD L F+ +A + H+ A+  S+A F+ C
Sbjct: 22  AEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGR-HDVAV-VSEAAFENC 81

Query: 84  VKPGIFFENV---IFVTFDRPGRKYFICNVGNHCNLGMKFAVDVLPSPGMPPNSALKIGA 143
            K           + +  +  G +YFIC VG+HC  G K ++ V+ + G    +    GA
Sbjct: 82  EKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV-AAGATGGATPGAGA 140

[Close]

BLAST of Carg09927 vs. TAIR 10
Match: AT3G18590.1 (early nodulin-like protein 5 )

HSP 1 Score: 72.0 bits (175), Expect = 4.8e-13
Identity = 46/145 (31.72%), Postives = 70/145 (48.28%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTF---FSEWATNITFSVGD 60
           M S++   +   L    +    ++ +  VGG+ GW +P + T    F++WA++  F VGD
Sbjct: 1   MDSSKKIIIVMFLVTFYMFSCVSSTEFEVGGENGWIVPKSKTLGDAFNQWASDNRFKVGD 60

Query: 61  TLRFNSSANQTHNYAMPESQAEFDGC--VKPGIFFENVIFV-TFDRPGRKYFICNVGNHC 120
           TLRF      T +  +  S+ E+  C   KP ++  N   V   DRPG  YFI  V  HC
Sbjct: 61  TLRF----KYTKDSVLVVSEEEYKKCKATKPQLYSNNEDTVFKLDRPGLFYFISGVSGHC 120

Query: 121 NLGMKFAVDVLPSPGM----PPNSA 136
             G K  V V+ +       PP+S+
Sbjct: 121 EKGQKMIVKVMETESSTESPPPSSS 141

[Close]

BLAST of Carg09927 vs. TAIR 10
Match: AT3G60270.1 (Cupredoxin superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.6e-11
Identity = 45/135 (33.33%), Postives = 70/135 (51.85%), Query Frame = 0


Query: 1   MGSTRSSFLASLLFIGALLHAAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTLR 60
           MGST ++ L  LL + A + A  AV  +VG + GW +      ++ W +  TF VGDTL 
Sbjct: 1   MGSTAATALLLLLLLVA-VPAVFAVTFQVGDNDGWTI---GVEYTSWVSEKTFRVGDTLE 60

Query: 61  FNSSANQTHNYAMPESQAEFDGCV---KPGIFFENVIFVTFDRPGRKYFICNVGNHCNLG 120
           F      +H+ A+  ++A++DGC        F +    +   + G  +F+C    HC+LG
Sbjct: 61  F--KYGPSHSVAV-VNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLG 120

Query: 121 MKFAVDVLPSPGMPP 133
           MK AV VL +  + P
Sbjct: 121 MKLAVQVLAAVSLEP 128

[Close]

BLAST of Carg09927 vs. TAIR 10
Match: AT2G31050.1 (Cupredoxin superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 8.4e-10
Identity = 43/133 (32.33%), Postives = 65/133 (48.87%), Query Frame = 0


Query: 6   SSFLASLLFIGALLH-AAAAVDHRVGGDFGWNLPPTPTFFSEWATNITFSVGDTL----- 65
           ++F  SLL + AL   +     H+VG   GW +      +  WA+ ITF VGD+L     
Sbjct: 7   NAFFTSLLILVALFGISVGGTVHKVGDSDGWTI--MSVNYETWASTITFQVGDSLVFKYN 66

Query: 66  -RFNSSANQTHN-YAMPESQAEFDGCVKPGIFFE---NVIFVTFDRPGRKYFICNVGNHC 125
             F+     THN Y M E         KP   +E   +++ +T  +PG ++FIC    HC
Sbjct: 67  KDFHDVTEVTHNDYEMCEPS-------KPLARYETGSDIVILT--KPGLQHFICGFPGHC 126

Query: 126 NLGMKFAVDVLPS 128
           ++G K  + VLP+
Sbjct: 127 DMGQKLQIHVLPA 128

The following BLAST results are available for this feature:

BLAST of Carg09927 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023509.1	8.9e-86	100.00	hypothetical protein SDJN02_14535, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589838.1	3.4e-85	99.37	hypothetical protein SDJN03_15261, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960663.1	3.4e-85	99.37	umecyanin-like [Cucurbita moschata]	[more]
XP_023516867.1	2.0e-77	91.72	umecyanin-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987885.1	6.4e-76	90.12	cucumber peeling cupredoxin-like [Cucurbita maxima]	[more]

BLAST of Carg09927 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29602	7.7e-16	34.11	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
O82081	9.4e-14	33.79	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
P42849	2.1e-13	36.45	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
Q07488	1.0e-12	35.25	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
P80728	7.0e-09	33.02	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]

BLAST of Carg09927 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9M4	1.6e-85	99.37	umecyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111461385 PE=4 SV=1	[more]
A0A6J1JI19	3.1e-76	90.12	cucumber peeling cupredoxin-like OS=Cucurbita maxima OX=3661 GN=LOC111485291 PE=...	[more]
A0A5D3C3B4	6.5e-58	71.25	Umecyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00100...	[more]
A0A1S3B9D0	6.5e-58	71.25	umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487432 PE=4 SV=1	[more]
A0A0A0LZE7	2.1e-56	69.18	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G348950...	[more]

BLAST of Carg09927 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32300.1	6.7e-15	33.79	uclacyanin 1	[more]
AT5G20230.1	7.4e-14	35.25	blue-copper-binding protein	[more]
AT3G18590.1	4.8e-13	31.72	early nodulin-like protein 5	[more]
AT3G60270.1	2.6e-11	33.33	Cupredoxin superfamily protein	[more]
AT2G31050.1	8.4e-10	32.33	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 38..118 e-value: 1.6E-12 score: 47.2
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 25..126 score: 26.601057
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 22..126 e-value: 5.9E-24 score: 86.4
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 24..126
None	No IPR available	PANTHER	PTHR33021:SF360	OS08G0482600 PROTEIN	coord: 8..132
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 8..132
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 102..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09927-RA	Carg09927-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity