Carg09926 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09926
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	umecyanin-like
Location	Carg_Chr10: 2508544 .. 2509111 (-)
RNA-Seq Expression	Carg09926
Synteny	Carg09926

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACCAAAATTAATGAGCTCAATTGCTTCTCTCTTCCTCCTTGGAGCTCTCCTTCAAGTCGTCGGCGACGTCGGAGGCGATTTTGGTTGGAACCTACCTCCAAACACCACCTTCTTTTCTGATTGGGCTAGTAACAAAGCTTTCTCCGTCGGTGACAAACTTGGTACGACGTAATAATCAATCATTCTAAGCATTTGAAAAGTCATTTCAAACTTACGTTTCTTGTTGTGTTTGTGTAGTGTTCCGATCGAAAGCCAACGAGATGCACGATGTCGCGGAGCCGAATTCTGAAGTGGACTTCGATGGATGTGTGAAGCCGGGGATAGTTTTCAGTACATCAGCTGTGTTTTCAGTGGCTCTTGATCGTCCTGGTCGTCGTTACTTCATTTGTACTATTGGGAACCATTGCAACGCCGGCATGAAATTTGATATCGACGTTTTGGCACAGCCTGGAGCGCCAAACTCCCCCTTGGTGCCGCCACCGCCTCCTAGCTCGGCTTCGTCCTTGAGATTTGGTGCATTATTGGCAGCTTTCTCTGGATTTCTCTTAACCATCGTAGCTTAA

mRNA sequence

ATGGGACCAAAATTAATGAGCTCAATTGCTTCTCTCTTCCTCCTTGGAGCTCTCCTTCAAGTCGTCGGCGACGTCGGAGGCGATTTTGGTTGGAACCTACCTCCAAACACCACCTTCTTTTCTGATTGGGCTAGTAACAAAGCTTTCTCCGTCGGTGACAAACTTGTGTTCCGATCGAAAGCCAACGAGATGCACGATGTCGCGGAGCCGAATTCTGAAGTGGACTTCGATGGATGTGTGAAGCCGGGGATAGTTTTCAGTACATCAGCTGTGTTTTCAGTGGCTCTTGATCGTCCTGGTCGTCGTTACTTCATTTGTACTATTGGGAACCATTGCAACGCCGGCATGAAATTTGATATCGACGTTTTGGCACAGCCTGGAGCGCCAAACTCCCCCTTGGTGCCGCCACCGCCTCCTAGCTCGGCTTCGTCCTTGAGATTTGGTGCATTATTGGCAGCTTTCTCTGGATTTCTCTTAACCATCGTAGCTTAA

Coding sequence (CDS)

ATGGGACCAAAATTAATGAGCTCAATTGCTTCTCTCTTCCTCCTTGGAGCTCTCCTTCAAGTCGTCGGCGACGTCGGAGGCGATTTTGGTTGGAACCTACCTCCAAACACCACCTTCTTTTCTGATTGGGCTAGTAACAAAGCTTTCTCCGTCGGTGACAAACTTGTGTTCCGATCGAAAGCCAACGAGATGCACGATGTCGCGGAGCCGAATTCTGAAGTGGACTTCGATGGATGTGTGAAGCCGGGGATAGTTTTCAGTACATCAGCTGTGTTTTCAGTGGCTCTTGATCGTCCTGGTCGTCGTTACTTCATTTGTACTATTGGGAACCATTGCAACGCCGGCATGAAATTTGATATCGACGTTTTGGCACAGCCTGGAGCGCCAAACTCCCCCTTGGTGCCGCCACCGCCTCCTAGCTCGGCTTCGTCCTTGAGATTTGGTGCATTATTGGCAGCTTTCTCTGGATTTCTCTTAACCATCGTAGCTTAA

Protein sequence

MGPKLMSSIASLFLLGALLQVVGDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIVA

Homology

[Close]

BLAST of Carg09926 vs. NCBI nr
Match: KAG7023510.1 (hypothetical protein SDJN02_14536, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.3 bits (848), Expect = 4.8e-87
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MGPKLMSSIASLFLLGALLQVVGDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSK 60
           MGPKLMSSIASLFLLGALLQVVGDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSK
Sbjct: 1   MGPKLMSSIASLFLLGALLQVVGDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSK 60

Query: 61  ANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDI 120
           ANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDI
Sbjct: 61  ANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDI 120

Query: 121 DVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIVA 164
           DVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIVA
Sbjct: 121 DVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIVA 163

[Close]

BLAST of Carg09926 vs. NCBI nr
Match: KAG6589839.1 (Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 161/167 (96.41%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MGPKLMSSIASLFLLGALLQVVG----DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLV 60
           MGPKLMSSIASLFLLGALLQVV     DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLV
Sbjct: 1   MGPKLMSSIASLFLLGALLQVVAAVDHDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLV 60

Query: 61  FRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM 120
           FRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM
Sbjct: 61  FRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM 120

Query: 121 KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIVA 164
           KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFS FLLTIVA
Sbjct: 121 KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSVFLLTIVA 167

[Close]

BLAST of Carg09926 vs. NCBI nr
Match: XP_022961110.1 (umecyanin-like [Cucurbita moschata])

HSP 1 Score: 318.5 bits (815), Expect = 3.3e-83
Identity = 160/167 (95.81%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MGPKLMSSIASLFLLGALLQVVG----DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLV 60
           MGPKLMSSIASLFLLGALLQVV     DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLV
Sbjct: 1   MGPKLMSSIASLFLLGALLQVVSAVDHDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLV 60

Query: 61  FRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM 120
           FRSKANEMHDVAEPNSEVD DGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM
Sbjct: 61  FRSKANEMHDVAEPNSEVDLDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM 120

Query: 121 KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIVA 164
           KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSG LLTIVA
Sbjct: 121 KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGLLLTIVA 167

[Close]

BLAST of Carg09926 vs. NCBI nr
Match: XP_023516899.1 (umecyanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.2 bits (814), Expect = 4.2e-83
Identity = 160/167 (95.81%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MGPKLMSSIASLFLLGALLQVVG----DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLV 60
           MGPKLMSSIASLFLLGALLQVV     DVGGDFGWNLP NTTFFSDWA NKAFSVGDKLV
Sbjct: 1   MGPKLMSSIASLFLLGALLQVVAAVDHDVGGDFGWNLPSNTTFFSDWARNKAFSVGDKLV 60

Query: 61  FRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM 120
           FRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM
Sbjct: 61  FRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM 120

Query: 121 KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIVA 164
           KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIVA
Sbjct: 121 KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIVA 167

[Close]

BLAST of Carg09926 vs. NCBI nr
Match: XP_022145012.1 (umecyanin-like [Momordica charantia])

HSP 1 Score: 241.1 bits (614), Expect = 6.6e-60
Identity = 118/163 (72.39%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 6   MSSIASLFLLGALLQVVG----DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKA 65
           +S +ASLF++GALL VV     DVGGDFGWNLPPN+TFFSDW+ ++ FSVGDKLVFRSKA
Sbjct: 5   LSLVASLFVVGALLHVVAAVDHDVGGDFGWNLPPNSTFFSDWSRSRTFSVGDKLVFRSKA 64

Query: 66  NEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDID 125
            E HDVAEP S+ DFDGCVKPGI F TSAVFS+ LDRP RRYFICTIG+HCNAGMKF +D
Sbjct: 65  TESHDVAEPPSQADFDGCVKPGITFGTSAVFSITLDRPRRRYFICTIGSHCNAGMKFVVD 124

Query: 126 VLAQPGAPNSPL-VPPPPPSSASSLRFGALLAAFSGFLLTIVA 164
           ++ QPGAPNS +  PPPPPSS SSLR GA +A F+GF+LTI+A
Sbjct: 125 IVEQPGAPNSAVEPPPPPPSSGSSLRVGA-VATFTGFILTIIA 166

[Close]

BLAST of Carg09926 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-16
Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 25  VGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKANEMHDVAEPNSEVDFDGC---VK 84
           VG + GW++P +  F+S WA+ K F VGD L F   AN  H+V E  ++  FD C     
Sbjct: 7   VGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPAN-AHNVHEMETKQSFDACNFVNS 66

Query: 85  PGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDIDVLAQPGAPNSPLVPPPPPSS 144
              V  TS V    LD  G  YF+CT+G HC+ G K  I+V+    A N+ +  PPP SS
Sbjct: 67  DNDVERTSPVIE-RLDELGMHYFVCTVGTHCSNGQKLSINVV----AANATVSMPPPSSS 123

[Close]

BLAST of Carg09926 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.6e-16
Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 24  DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKANEMHDVAEPNSEVDFDGCVKPG 83
           DVGGD  W  P +  F+  WA+ K F VGD+L F   A  MHDVA    +  FD C K  
Sbjct: 4   DVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAG-MHDVAVVTKDA-FDNCKKEN 63

Query: 84  -IVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDIDVLAQPGA 129
            I   T+    + L+  G +Y+ICT+G+HC  G K  I+V+   GA
Sbjct: 64  PISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAGGA 107

[Close]

BLAST of Carg09926 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-13
Identity = 50/129 (38.76%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 24  DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKANEMHDVAEPNSEVDFDGCVK-P 83
           DVG D  W  P +  F++ WA+ K F VGD+L F   A   HDVA   SE  F+ C K  
Sbjct: 26  DVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGR-HDVAVV-SEAAFENCEKEK 85

Query: 84  GIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDIDVL-------AQPGAPNSPLVP 143
            I   T     + L+  G +YFICT+G+HC  G K  I V+       A PGA  +P  P
Sbjct: 86  PISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGATGGATPGAGATP-AP 145

Query: 144 PPPPSSASS 145
              PS+  +
Sbjct: 146 GSTPSTGGT 151

[Close]

BLAST of Carg09926 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.7e-13
Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 5   LMSSIASLFLLGALLQVVGDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKANEM 64
           ++ S+ +  L+G  +     +GG  GW +  +      WA+ + F+VGD LVF   A   
Sbjct: 8   IIISVLATTLIGLTVATDHTIGGPSGWTVGAS---LRTWAAGQTFAVGDNLVFSYPA-AF 67

Query: 65  HDVAEPNSEVDFDGC--VKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDIDV 124
           HDV E  ++ +FD C  VKP I F+      V L  PG+RYFIC +  HC+ GMK +++V
Sbjct: 68  HDVVEV-TKPEFDSCQAVKPLITFANGNSL-VPLTTPGKRYFICGMPGHCSQGMKLEVNV 127

Query: 125 L-AQPGAPNSPLVPPPPPSSASS 145
           +     AP +PL    P  +A S
Sbjct: 128 VPTATVAPTAPLPNTVPSLNAPS 144

[Close]

BLAST of Carg09926 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.5e-10
Identity = 43/126 (34.13%), Postives = 58/126 (46.03%), Query Frame = 0


Query: 19  LQVVGDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKANEMHDVAEPNSEVDFDG 78
           L  V  VG   GW +  +   +S WAS+K F+VGD LVF   A   H V E   E D+  
Sbjct: 23  LATVYTVGDTSGWVIGGD---YSTWASDKTFAVGDSLVFNYGAG-AHTVDEV-KESDYKS 82

Query: 79  CVKPGIVFSTS-AVFSVALDRPGRRYFICTIGNHCNAGMKFDIDVLAQPGAPNSPLVPPP 138
           C     + + S    ++ L + G+ YFIC +  H   GMK  I V A  G+  +P   P 
Sbjct: 83  CTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSGSSAAPSATPS 142

Query: 139 PPSSAS 144
                S
Sbjct: 143 SSGKGS 143

[Close]

BLAST of Carg09926 vs. ExPASy TrEMBL
Match: A0A6J1HB34 (umecyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111461718 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 160/167 (95.81%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MGPKLMSSIASLFLLGALLQVVG----DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLV 60
           MGPKLMSSIASLFLLGALLQVV     DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLV
Sbjct: 1   MGPKLMSSIASLFLLGALLQVVSAVDHDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLV 60

Query: 61  FRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM 120
           FRSKANEMHDVAEPNSEVD DGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM
Sbjct: 61  FRSKANEMHDVAEPNSEVDLDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGM 120

Query: 121 KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGFLLTIVA 164
           KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSG LLTIVA
Sbjct: 121 KFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSGLLLTIVA 167

[Close]

BLAST of Carg09926 vs. ExPASy TrEMBL
Match: A0A6J1CVB4 (umecyanin-like OS=Momordica charantia OX=3673 GN=LOC111014540 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.2e-60
Identity = 118/163 (72.39%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 6   MSSIASLFLLGALLQVVG----DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKA 65
           +S +ASLF++GALL VV     DVGGDFGWNLPPN+TFFSDW+ ++ FSVGDKLVFRSKA
Sbjct: 5   LSLVASLFVVGALLHVVAAVDHDVGGDFGWNLPPNSTFFSDWSRSRTFSVGDKLVFRSKA 64

Query: 66  NEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDID 125
            E HDVAEP S+ DFDGCVKPGI F TSAVFS+ LDRP RRYFICTIG+HCNAGMKF +D
Sbjct: 65  TESHDVAEPPSQADFDGCVKPGITFGTSAVFSITLDRPRRRYFICTIGSHCNAGMKFVVD 124

Query: 126 VLAQPGAPNSPL-VPPPPPSSASSLRFGALLAAFSGFLLTIVA 164
           ++ QPGAPNS +  PPPPPSS SSLR GA +A F+GF+LTI+A
Sbjct: 125 IVEQPGAPNSAVEPPPPPPSSGSSLRVGA-VATFTGFILTIIA 166

[Close]

BLAST of Carg09926 vs. ExPASy TrEMBL
Match: A0A5D3C3B0 (Umecyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001020 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 122/170 (71.76%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 1   MGPKLM--SSIASLFLLGALLQVVG----DVGGDFGWNLPPNTTFFSDWASNKAFSVGDK 60
           M  KLM  SSIA LFL+GALLQVV     DVGGDFGWNLPPN TFFSDW  NK F VGDK
Sbjct: 1   MATKLMSSSSIACLFLVGALLQVVSAVDYDVGGDFGWNLPPNPTFFSDWTRNKTFFVGDK 60

Query: 61  LVFRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNA 120
           LVFRSK++E HDVAEP  + D DGCVKPGI  STSAV S++LD P RRYFICTIGNHCNA
Sbjct: 61  LVFRSKSSESHDVAEPERQTDLDGCVKPGITLSTSAVLSISLDSPRRRYFICTIGNHCNA 120

Query: 121 GMKFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSG---FLLTI 162
           GMKF +DV      PNS L+PPPPPSSASSLRFGA+LAA      FLLTI
Sbjct: 121 GMKFSVDVFVN---PNSALLPPPPPSSASSLRFGAVLAAAMAGLFFLLTI 167

[Close]

BLAST of Carg09926 vs. ExPASy TrEMBL
Match: A0A1S3BA22 (umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487433 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 122/170 (71.76%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 1   MGPKLM--SSIASLFLLGALLQVVG----DVGGDFGWNLPPNTTFFSDWASNKAFSVGDK 60
           M  KLM  SSIA LFL+GALLQVV     DVGGDFGWNLPPN TFFSDW  NK F VGDK
Sbjct: 1   MATKLMSSSSIACLFLVGALLQVVSAVDYDVGGDFGWNLPPNPTFFSDWTRNKTFFVGDK 60

Query: 61  LVFRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNA 120
           LVFRSK++E HDVAEP  + D DGCVKPGI  STSAV S++LD P RRYFICTIGNHCNA
Sbjct: 61  LVFRSKSSESHDVAEPERQTDLDGCVKPGITLSTSAVLSISLDSPRRRYFICTIGNHCNA 120

Query: 121 GMKFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSG---FLLTI 162
           GMKF +DV      PNS L+PPPPPSSASSLRFGA+LAA      FLLTI
Sbjct: 121 GMKFSVDVFVN---PNSALLPPPPPSSASSLRFGAVLAAAMAGLFFLLTI 167

[Close]

BLAST of Carg09926 vs. ExPASy TrEMBL
Match: A0A0A0LWH3 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G348440 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.1e-52
Identity = 117/170 (68.82%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 1   MGPKLM--SSIASLFLLGALLQVVG----DVGGDFGWNLPPNTTFFSDWASNKAFSVGDK 60
           M  KLM  SSIA L L+GA L V      DVGGDFGW+LPPN TFFSDWA NK F VGDK
Sbjct: 1   MATKLMSLSSIACLLLVGAFLHVASAVDYDVGGDFGWSLPPNPTFFSDWARNKTFFVGDK 60

Query: 61  LVFRSKANEMHDVAEPNSEVDFDGCVKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNA 120
           LVFRSKA+E HDVAEP+ +VD DGCV+PGI  STSAV S++LD P RRYFICTIGNHCNA
Sbjct: 61  LVFRSKASETHDVAEPDGQVDLDGCVEPGISLSTSAVLSISLDSPRRRYFICTIGNHCNA 120

Query: 121 GMKFDIDVLAQPGAPNSPLVPPPPPSSASSLRFGALLAAFSG---FLLTI 162
           GMKF +DV      PNS +  PPPPSSASSLRFGA+LAA      FLLTI
Sbjct: 121 GMKFAVDVFIN---PNSAM--PPPPSSASSLRFGAVLAAAMAGLFFLLTI 165

[Close]

BLAST of Carg09926 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-14
Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 5   LMSSIASLFLLGALLQVVGDVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKANEM 64
           ++ S+ +  L+G  +     +GG  GW +  +      WA+ + F+VGD LVF   A   
Sbjct: 8   IIISVLATTLIGLTVATDHTIGGPSGWTVGAS---LRTWAAGQTFAVGDNLVFSYPA-AF 67

Query: 65  HDVAEPNSEVDFDGC--VKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDIDV 124
           HDV E  ++ +FD C  VKP I F+      V L  PG+RYFIC +  HC+ GMK +++V
Sbjct: 68  HDVVEV-TKPEFDSCQAVKPLITFANGNSL-VPLTTPGKRYFICGMPGHCSQGMKLEVNV 127

Query: 125 L-AQPGAPNSPLVPPPPPSSASS 145
           +     AP +PL    P  +A S
Sbjct: 128 VPTATVAPTAPLPNTVPSLNAPS 144

[Close]

BLAST of Carg09926 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-14
Identity = 50/129 (38.76%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 24  DVGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKANEMHDVAEPNSEVDFDGCVK-P 83
           DVG D  W  P +  F++ WA+ K F VGD+L F   A   HDVA   SE  F+ C K  
Sbjct: 26  DVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGR-HDVAVV-SEAAFENCEKEK 85

Query: 84  GIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDIDVL-------AQPGAPNSPLVP 143
            I   T     + L+  G +YFICT+G+HC  G K  I V+       A PGA  +P  P
Sbjct: 86  PISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGATGGATPGAGATP-AP 145

Query: 144 PPPPSSASS 145
              PS+  +
Sbjct: 146 GSTPSTGGT 151

[Close]

BLAST of Carg09926 vs. TAIR 10
Match: AT3G18590.1 (early nodulin-like protein 5 )

HSP 1 Score: 68.9 bits (167), Expect = 4.2e-12
Identity = 47/150 (31.33%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 9   IASLFLLGALLQVVGDVGGDFGWNLPPNTTF---FSDWASNKAFSVGDKLVFRSKANEMH 68
           + + ++   +     +VGG+ GW +P + T    F+ WAS+  F VGD L F+   + + 
Sbjct: 13  LVTFYMFSCVSSTEFEVGGENGWIVPKSKTLGDAFNQWASDNRFKVGDTLRFKYTKDSVL 72

Query: 69  DVAEPNSEVDFDGC--VKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDIDVL 128
            V    SE ++  C   KP + +S +      LDRPG  YFI  +  HC  G K  + V+
Sbjct: 73  VV----SEEEYKKCKATKPQL-YSNNEDTVFKLDRPGLFYFISGVSGHCEKGQKMIVKVM 132

Query: 129 AQPGAPNSPLVPPPPPSSASSLRFGALLAA 154
               +  S    PPP SS+SS    +L A+
Sbjct: 133 ETESSTES----PPPSSSSSSSSSSSLPAS 153

[Close]

BLAST of Carg09926 vs. TAIR 10
Match: AT1G48940.1 (early nodulin-like protein 6 )

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 44/143 (30.77%), Postives = 65/143 (45.45%), Query Frame = 0


Query: 5   LMSSIASLFLLGALLQVVGDVGGDFGWNLPPNTT---FFSDWASNKAFSVGDKLVFRSKA 64
           L+S     ++   +     + GG+ GW +P ++     F+ WAS   F VGD + F+ K 
Sbjct: 8   LLSIFVCFYVFSLVSCTEFEAGGENGWIIPQSSNQSDIFNQWASKNRFKVGDTIRFKYKK 67

Query: 65  NEMHDVAEPNSEVDFDGC--VKPGIVFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFD 124
           + +  V E     ++  C   KP + +S        LDRPG  YFI  +  HC  G K  
Sbjct: 68  DSVLVVTED----EYKKCQTTKPEL-YSNHDDTVFKLDRPGLFYFISGVSGHCEQGQKMI 127

Query: 125 IDVLAQPGAPNSPLVPPPPPSSA 143
           I V+     P S     PPPSS+
Sbjct: 128 IKVMEVESTPQS-----PPPSSS 140

[Close]

BLAST of Carg09926 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 4.3e-09
Identity = 33/98 (33.67%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 25  VGGDFGWNLPPNTTFFSDWASNKAFSVGDKLVFRSKANEMHDVAEPNSEVDFDGCVKPGI 84
           VG   GW L  N   +++W   + F VGD LVF  K+++ H+V + NS    D  +    
Sbjct: 11  VGDSNGWELFTN---YTNWTQGREFHVGDVLVFNYKSDQ-HNVMQVNSTAYTDCGLDNYT 70

Query: 85  VFSTSAVFSVALDRPGRRYFICTIGNHCNAGMKFDIDV 123
              T    S+ L   G+ +FIC + +HC  G K  I+V
Sbjct: 71  TLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINV 104

The following BLAST results are available for this feature:

BLAST of Carg09926 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023510.1	4.8e-87	100.00	hypothetical protein SDJN02_14536, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589839.1	1.5e-83	96.41	Uclacyanin 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022961110.1	3.3e-83	95.81	umecyanin-like [Cucurbita moschata]	[more]
XP_023516899.1	4.2e-83	95.81	umecyanin-like [Cucurbita pepo subsp. pepo]	[more]
XP_022145012.1	6.6e-60	72.39	umecyanin-like [Momordica charantia]	[more]

BLAST of Carg09926 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29602	3.6e-16	40.65	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
P42849	4.6e-16	41.51	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
Q07488	1.7e-13	38.76	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
O82081	1.7e-13	35.66	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
Q41001	6.5e-10	34.13	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]

BLAST of Carg09926 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HB34	1.6e-83	95.81	umecyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111461718 PE=4 SV=1	[more]
A0A6J1CVB4	3.2e-60	72.39	umecyanin-like OS=Momordica charantia OX=3673 GN=LOC111014540 PE=4 SV=1	[more]
A0A5D3C3B0	1.5e-57	71.76	Umecyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00102...	[more]
A0A1S3BA22	1.5e-57	71.76	umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487433 PE=4 SV=1	[more]
A0A0A0LWH3	1.1e-52	68.82	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G348440...	[more]

BLAST of Carg09926 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32300.1	1.2e-14	35.66	uclacyanin 1	[more]
AT5G20230.1	1.2e-14	38.76	blue-copper-binding protein	[more]
AT3G18590.1	4.2e-12	31.33	early nodulin-like protein 5	[more]
AT1G48940.1	1.0e-10	30.77	early nodulin-like protein 6	[more]
AT3G17675.1	4.3e-09	33.67	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 21..125 e-value: 3.9E-27 score: 96.6
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 25..124
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 31..116 e-value: 1.9E-16 score: 59.8
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 21..124 score: 31.566071
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 16..143
None	No IPR available	PANTHER	PTHR33021:SF360	OS08G0482600 PROTEIN	coord: 16..143
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 100..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09926-RA	Carg09926-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0009055	electron transfer activity