Carg09915 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg09915
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein kinase C and casein kinase substrate in neurons protein
LocationCarg_Chr10: 2559585 .. 2560071 (-)
RNA-Seq ExpressionCarg09915
SyntenyCarg09915
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCGACGATGAACTCACAGGGGATGGCTCTGGCCGTGGCCACAGCCATGGCAGCCGTCTCCGGCACTGTAATTCTTCTCTCCTTTTGCATCCAAAAATCCATCCAATTTTCACCTCCGACTCCATCTCTCCGTTCCTGTATTCCCTCCGGTAAGTTCTGCAAAATTCCCATCTAATTTCTTCCACTTTCATCTCTTGAACTGAGCTGATTCTTCCCGTAATCGACCCTTTTCAGACACGAAGAAGACCAAGAAGAAGAACAAAAGGGTCCACTTCGCAAAAGACGTCGTCGATCCTATCGGCAACGGCGACGATTTCCGAAGACAACACGAACTCGCTTGCAACAACAATAATTCCAACACCGCTTCTCCGCCGTCGCAAAACCCCCCCACCGCCCCTCGAGGAATGCCGGCGAACAGAGTAGCGCTCTATAACGGGATTTTAAGAGATCGCGTTGTTCATCGTTACGCTTACTCTTGTTGA

mRNA sequence

ATGTCGTCGACGATGAACTCACAGGGGATGGCTCTGGCCGTGGCCACAGCCATGGCAGCCGTCTCCGGCACTGTAATTCTTCTCTCCTTTTGCATCCAAAAATCCATCCAATTTTCACCTCCGACTCCATCTCTCCGTTCCTGTATTCCCTCCGACACGAAGAAGACCAAGAAGAAGAACAAAAGGGTCCACTTCGCAAAAGACGTCGTCGATCCTATCGGCAACGGCGACGATTTCCGAAGACAACACGAACTCGCTTGCAACAACAATAATTCCAACACCGCTTCTCCGCCGTCGCAAAACCCCCCCACCGCCCCTCGAGGAATGCCGGCGAACAGAGTAGCGCTCTATAACGGGATTTTAAGAGATCGCGTTGTTCATCGTTACGCTTACTCTTGTTGA

Coding sequence (CDS)

ATGTCGTCGACGATGAACTCACAGGGGATGGCTCTGGCCGTGGCCACAGCCATGGCAGCCGTCTCCGGCACTGTAATTCTTCTCTCCTTTTGCATCCAAAAATCCATCCAATTTTCACCTCCGACTCCATCTCTCCGTTCCTGTATTCCCTCCGACACGAAGAAGACCAAGAAGAAGAACAAAAGGGTCCACTTCGCAAAAGACGTCGTCGATCCTATCGGCAACGGCGACGATTTCCGAAGACAACACGAACTCGCTTGCAACAACAATAATTCCAACACCGCTTCTCCGCCGTCGCAAAACCCCCCCACCGCCCCTCGAGGAATGCCGGCGAACAGAGTAGCGCTCTATAACGGGATTTTAAGAGATCGCGTTGTTCATCGTTACGCTTACTCTTGTTGA

Protein sequence

MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKNKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGILRDRVVHRYAYSC
Homology
BLAST of Carg09915 vs. NCBI nr
Match: XP_022961010.1 (uncharacterized protein LOC111461643 isoform X2 [Cucurbita moschata] >KAG7023521.1 hypothetical protein SDJN02_14547, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.9 bits (668), Expect = 2.9e-66
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN 60
           MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN
Sbjct: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN 60

Query: 61  KRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGI 120
           KRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGI
Sbjct: 61  KRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGI 120

Query: 121 LRDRVVHRYAYSC 134
           LRDRVVHRYAYSC
Sbjct: 121 LRDRVVHRYAYSC 133

BLAST of Carg09915 vs. NCBI nr
Match: XP_022961009.1 (uncharacterized protein LOC111461643 isoform X1 [Cucurbita moschata] >KAG6589850.1 hypothetical protein SDJN03_15273, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 257.3 bits (656), Expect = 7.3e-65
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIP-SDTKKTKKK 60
           MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIP SDTKKTKKK
Sbjct: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSSDTKKTKKK 60

Query: 61  NKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNG 120
           NKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNG
Sbjct: 61  NKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNG 120

Query: 121 ILRDRVVHRYAYSC 134
           ILRDRVVHRYAYSC
Sbjct: 121 ILRDRVVHRYAYSC 134

BLAST of Carg09915 vs. NCBI nr
Match: XP_023516463.1 (uncharacterized protein LOC111780321 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.8 bits (639), Expect = 6.8e-63
Identity = 130/133 (97.74%), Postives = 130/133 (97.74%), Query Frame = 0

Query: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN 60
           MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN
Sbjct: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN 60

Query: 61  KRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGI 120
           KRVHFAKDVVDPI NGDDFRRQHELAC NNNSNTASPP QNPPTAPRGMPANRVALYNGI
Sbjct: 61  KRVHFAKDVVDPISNGDDFRRQHELAC-NNNSNTASPPLQNPPTAPRGMPANRVALYNGI 120

Query: 121 LRDRVVHRYAYSC 134
           LRDRVVHRYAYSC
Sbjct: 121 LRDRVVHRYAYSC 132

BLAST of Carg09915 vs. NCBI nr
Match: XP_022987901.1 (uncharacterized protein LOC111485303 [Cucurbita maxima])

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62
Identity = 129/133 (96.99%), Postives = 130/133 (97.74%), Query Frame = 0

Query: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN 60
           MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPS+TKK KKKN
Sbjct: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSETKKNKKKN 60

Query: 61  KRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGI 120
           KRVHFAKDVVDPIGNGDDFRRQHELAC NNNSNTASPPSQNPP APRGMPANRVALYNGI
Sbjct: 61  KRVHFAKDVVDPIGNGDDFRRQHELAC-NNNSNTASPPSQNPPAAPRGMPANRVALYNGI 120

Query: 121 LRDRVVHRYAYSC 134
           LRDRVVHRYAYSC
Sbjct: 121 LRDRVVHRYAYSC 132

BLAST of Carg09915 vs. NCBI nr
Match: XP_038879742.1 (uncharacterized protein LOC120071499 [Benincasa hispida])

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43
Identity = 108/142 (76.06%), Postives = 116/142 (81.69%), Query Frame = 0

Query: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSI---QFSPPTPSLRSCIPSDTKKTK 60
           MSS MNSQGMAL  ATAMAAVSGTVILLSFCIQKSI   QFSPPT  LRSCIPSDT+K K
Sbjct: 1   MSSMMNSQGMAL--ATAMAAVSGTVILLSFCIQKSIPIHQFSPPT--LRSCIPSDTRKKK 60

Query: 61  KKNKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPR------GMPA 120
           K  KRVHFAKDVVDPIGNG+DFRR+HE+A NNN S+++S  S  PP  P       GMPA
Sbjct: 61  KHKKRVHFAKDVVDPIGNGEDFRRRHEIAWNNNYSSSSSSSSSLPPQNPSAAAVDPGMPA 120

Query: 121 NRVALYNGILRDRVVHRYAYSC 134
           NRVALYNGILRDRVVHR+AYSC
Sbjct: 121 NRVALYNGILRDRVVHRHAYSC 138

BLAST of Carg09915 vs. ExPASy TrEMBL
Match: A0A6J1HAR2 (uncharacterized protein LOC111461643 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461643 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.4e-66
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0

Query: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN 60
           MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN
Sbjct: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN 60

Query: 61  KRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGI 120
           KRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGI
Sbjct: 61  KRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGI 120

Query: 121 LRDRVVHRYAYSC 134
           LRDRVVHRYAYSC
Sbjct: 121 LRDRVVHRYAYSC 133

BLAST of Carg09915 vs. ExPASy TrEMBL
Match: A0A6J1HCR8 (uncharacterized protein LOC111461643 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461643 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.5e-65
Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0

Query: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIP-SDTKKTKKK 60
           MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIP SDTKKTKKK
Sbjct: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSSDTKKTKKK 60

Query: 61  NKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNG 120
           NKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNG
Sbjct: 61  NKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNG 120

Query: 121 ILRDRVVHRYAYSC 134
           ILRDRVVHRYAYSC
Sbjct: 121 ILRDRVVHRYAYSC 134

BLAST of Carg09915 vs. ExPASy TrEMBL
Match: A0A6J1JFN4 (uncharacterized protein LOC111485303 OS=Cucurbita maxima OX=3661 GN=LOC111485303 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 5.6e-63
Identity = 129/133 (96.99%), Postives = 130/133 (97.74%), Query Frame = 0

Query: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN 60
           MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPS+TKK KKKN
Sbjct: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSETKKNKKKN 60

Query: 61  KRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGI 120
           KRVHFAKDVVDPIGNGDDFRRQHELAC NNNSNTASPPSQNPP APRGMPANRVALYNGI
Sbjct: 61  KRVHFAKDVVDPIGNGDDFRRQHELAC-NNNSNTASPPSQNPPAAPRGMPANRVALYNGI 120

Query: 121 LRDRVVHRYAYSC 134
           LRDRVVHRYAYSC
Sbjct: 121 LRDRVVHRYAYSC 132

BLAST of Carg09915 vs. ExPASy TrEMBL
Match: A0A5A7U994 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001310 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.2e-42
Identity = 109/143 (76.22%), Postives = 117/143 (81.82%), Query Frame = 0

Query: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSI---QFSPPTPSLRSCIPSDTKKTK 60
           MSS MNSQGMAL  ATAMAAVSGTVILLSFCIQK+I   QFSPPT  LRSC PS++ K K
Sbjct: 1   MSSMMNSQGMAL--ATAMAAVSGTVILLSFCIQKTIPIHQFSPPT--LRSCFPSESSKKK 60

Query: 61  KK----NKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTA---PRGMP 120
           KK     KRVHFAKDVVDPIGNG+DFRRQHE+A NNN S  +S P+QNPPTA   PR MP
Sbjct: 61  KKQNNHKKRVHFAKDVVDPIGNGEDFRRQHEIAYNNNYS--SSSPAQNPPTAAVDPR-MP 120

Query: 121 ANRVALYNGILRDRVVHRYAYSC 134
           ANRVALYNGI+RDRVVHRY YSC
Sbjct: 121 ANRVALYNGIMRDRVVHRYTYSC 136

BLAST of Carg09915 vs. ExPASy TrEMBL
Match: A0A1S3B9B6 (uncharacterized protein LOC103487448 OS=Cucumis melo OX=3656 GN=LOC103487448 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.2e-42
Identity = 109/143 (76.22%), Postives = 117/143 (81.82%), Query Frame = 0

Query: 1   MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSI---QFSPPTPSLRSCIPSDTKKTK 60
           MSS MNSQGMAL  ATAMAAVSGTVILLSFCIQK+I   QFSPPT  LRSC PS++ K K
Sbjct: 1   MSSMMNSQGMAL--ATAMAAVSGTVILLSFCIQKTIPIHQFSPPT--LRSCFPSESSKKK 60

Query: 61  KK----NKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTA---PRGMP 120
           KK     KRVHFAKDVVDPIGNG+DFRRQHE+A NNN S  +S P+QNPPTA   PR MP
Sbjct: 61  KKQNNHKKRVHFAKDVVDPIGNGEDFRRQHEIAYNNNYS--SSSPAQNPPTAAVDPR-MP 120

Query: 121 ANRVALYNGILRDRVVHRYAYSC 134
           ANRVALYNGI+RDRVVHRY YSC
Sbjct: 121 ANRVALYNGIMRDRVVHRYTYSC 136

BLAST of Carg09915 vs. TAIR 10
Match: AT3G15760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 3.2e-10
Identity = 53/129 (41.09%), Postives = 67/129 (51.94%), Query Frame = 0

Query: 12  LAVATAMAAVSGTVILLSFCIQKSIQFSPP-------TPSLRSCIPS-DTKKTKKKNKRV 71
           + +ATAM   S T + L+   Q       P        P LRSC+ S +TKK  KK K+V
Sbjct: 9   VVIATAMVC-SSTALFLAMARQFHGNHQNPKVLDQTLRPILRSCLSSEETKKQGKKIKKV 68

Query: 72  HFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGILRD 131
            FA +V D  GNG+++RR+ EL   +       P           MPANR+ALYNGILRD
Sbjct: 69  RFADNVKDTKGNGEEYRRR-ELNRKSVPKPVTKPGKTGSMCRISTMPANRMALYNGILRD 128

Query: 132 RVVHRYAYS 133
           R  HR  YS
Sbjct: 129 R-DHRVQYS 134

BLAST of Carg09915 vs. TAIR 10
Match: AT1G52565.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 2.7e-09
Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 0

Query: 12  LAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKN--KRVHFAKDV 71
           + +ATAM   S T + L+   Q S   +     LRSC+ S+ KK ++KN  K+V FA++V
Sbjct: 11  VVIATAM-VFSSTALFLAISRQFSGNQTSDQQILRSCLSSEEKKKQRKNKKKKVKFAENV 70

Query: 72  VDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGILRDR 125
            +  GNG+++R++   +           P +        MPANR+ALYNGILRDR
Sbjct: 71  KETKGNGEEYRKK---SLRRIVPEQMIKPEKTGSVCRNDMPANRIALYNGILRDR 121

BLAST of Carg09915 vs. TAIR 10
Match: AT2G35850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52360.1); Has 42 Blast hits to 42 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 3.4e-04
Identity = 24/62 (38.71%), Postives = 38/62 (61.29%), Query Frame = 0

Query: 20 AVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKNKRVHFAKDVVDPIGNGDDF 79
          AVSG+V+LL+  + K +            +   TK+ KKK K+V FA+D+V+P GN +++
Sbjct: 12 AVSGSVVLLAAQLHKRL-----LSGYMDKLEPPTKERKKKKKKVSFAEDMVEPSGNNEEY 68

Query: 80 RR 82
          RR
Sbjct: 72 RR 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022961010.12.9e-66100.00uncharacterized protein LOC111461643 isoform X2 [Cucurbita moschata] >KAG7023521... [more]
XP_022961009.17.3e-6599.25uncharacterized protein LOC111461643 isoform X1 [Cucurbita moschata] >KAG6589850... [more]
XP_023516463.16.8e-6397.74uncharacterized protein LOC111780321 [Cucurbita pepo subsp. pepo][more]
XP_022987901.11.2e-6296.99uncharacterized protein LOC111485303 [Cucurbita maxima][more]
XP_038879742.11.2e-4376.06uncharacterized protein LOC120071499 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HAR21.4e-66100.00uncharacterized protein LOC111461643 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1HCR83.5e-6599.25uncharacterized protein LOC111461643 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JFN45.6e-6396.99uncharacterized protein LOC111485303 OS=Cucurbita maxima OX=3661 GN=LOC111485303... [more]
A0A5A7U9943.2e-4276.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B9B63.2e-4276.22uncharacterized protein LOC103487448 OS=Cucumis melo OX=3656 GN=LOC103487448 PE=... [more]
Match NameE-valueIdentityDescription
AT3G15760.13.2e-1041.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G52565.12.7e-0937.39unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G35850.13.4e-0438.71unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..110
NoneNo IPR availablePANTHERPTHR33564:SF11OS06G0604600 PROTEINcoord: 1..133
NoneNo IPR availablePANTHERPTHR33564TRANSMEMBRANE PROTEINcoord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09915-RACarg09915-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane