Carg09915 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTCGACGATGAACTCACAGGGGATGGCTCTGGCCGTGGCCACAGCCATGGCAGCCGTCTCCGGCACTGTAATTCTTCTCTCCTTTTGCATCCAAAAATCCATCCAATTTTCACCTCCGACTCCATCTCTCCGTTCCTGTATTCCCTCCGGTAAGTTCTGCAAAATTCCCATCTAATTTCTTCCACTTTCATCTCTTGAACTGAGCTGATTCTTCCCGTAATCGACCCTTTTCAGACACGAAGAAGACCAAGAAGAAGAACAAAAGGGTCCACTTCGCAAAAGACGTCGTCGATCCTATCGGCAACGGCGACGATTTCCGAAGACAACACGAACTCGCTTGCAACAACAATAATTCCAACACCGCTTCTCCGCCGTCGCAAAACCCCCCCACCGCCCCTCGAGGAATGCCGGCGAACAGAGTAGCGCTCTATAACGGGATTTTAAGAGATCGCGTTGTTCATCGTTACGCTTACTCTTGTTGA ATGTCGTCGACGATGAACTCACAGGGGATGGCTCTGGCCGTGGCCACAGCCATGGCAGCCGTCTCCGGCACTGTAATTCTTCTCTCCTTTTGCATCCAAAAATCCATCCAATTTTCACCTCCGACTCCATCTCTCCGTTCCTGTATTCCCTCCGACACGAAGAAGACCAAGAAGAAGAACAAAAGGGTCCACTTCGCAAAAGACGTCGTCGATCCTATCGGCAACGGCGACGATTTCCGAAGACAACACGAACTCGCTTGCAACAACAATAATTCCAACACCGCTTCTCCGCCGTCGCAAAACCCCCCCACCGCCCCTCGAGGAATGCCGGCGAACAGAGTAGCGCTCTATAACGGGATTTTAAGAGATCGCGTTGTTCATCGTTACGCTTACTCTTGTTGA ATGTCGTCGACGATGAACTCACAGGGGATGGCTCTGGCCGTGGCCACAGCCATGGCAGCCGTCTCCGGCACTGTAATTCTTCTCTCCTTTTGCATCCAAAAATCCATCCAATTTTCACCTCCGACTCCATCTCTCCGTTCCTGTATTCCCTCCGACACGAAGAAGACCAAGAAGAAGAACAAAAGGGTCCACTTCGCAAAAGACGTCGTCGATCCTATCGGCAACGGCGACGATTTCCGAAGACAACACGAACTCGCTTGCAACAACAATAATTCCAACACCGCTTCTCCGCCGTCGCAAAACCCCCCCACCGCCCCTCGAGGAATGCCGGCGAACAGAGTAGCGCTCTATAACGGGATTTTAAGAGATCGCGTTGTTCATCGTTACGCTTACTCTTGTTGA MSSTMNSQGMALAVATAMAAVSGTVILLSFCIQKSIQFSPPTPSLRSCIPSDTKKTKKKNKRVHFAKDVVDPIGNGDDFRRQHELACNNNNSNTASPPSQNPPTAPRGMPANRVALYNGILRDRVVHRYAYSC Homology
BLAST of Carg09915 vs. NCBI nr
Match: XP_022961010.1 (uncharacterized protein LOC111461643 isoform X2 [Cucurbita moschata] >KAG7023521.1 hypothetical protein SDJN02_14547, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 261.9 bits (668), Expect = 2.9e-66 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Carg09915 vs. NCBI nr
Match: XP_022961009.1 (uncharacterized protein LOC111461643 isoform X1 [Cucurbita moschata] >KAG6589850.1 hypothetical protein SDJN03_15273, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 257.3 bits (656), Expect = 7.3e-65 Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of Carg09915 vs. NCBI nr
Match: XP_023516463.1 (uncharacterized protein LOC111780321 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 250.8 bits (639), Expect = 6.8e-63 Identity = 130/133 (97.74%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of Carg09915 vs. NCBI nr
Match: XP_022987901.1 (uncharacterized protein LOC111485303 [Cucurbita maxima]) HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62 Identity = 129/133 (96.99%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of Carg09915 vs. NCBI nr
Match: XP_038879742.1 (uncharacterized protein LOC120071499 [Benincasa hispida]) HSP 1 Score: 186.8 bits (473), Expect = 1.2e-43 Identity = 108/142 (76.06%), Postives = 116/142 (81.69%), Query Frame = 0
BLAST of Carg09915 vs. ExPASy TrEMBL
Match: A0A6J1HAR2 (uncharacterized protein LOC111461643 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461643 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 1.4e-66 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Carg09915 vs. ExPASy TrEMBL
Match: A0A6J1HCR8 (uncharacterized protein LOC111461643 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461643 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.5e-65 Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of Carg09915 vs. ExPASy TrEMBL
Match: A0A6J1JFN4 (uncharacterized protein LOC111485303 OS=Cucurbita maxima OX=3661 GN=LOC111485303 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 5.6e-63 Identity = 129/133 (96.99%), Postives = 130/133 (97.74%), Query Frame = 0
BLAST of Carg09915 vs. ExPASy TrEMBL
Match: A0A5A7U994 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001310 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 3.2e-42 Identity = 109/143 (76.22%), Postives = 117/143 (81.82%), Query Frame = 0
BLAST of Carg09915 vs. ExPASy TrEMBL
Match: A0A1S3B9B6 (uncharacterized protein LOC103487448 OS=Cucumis melo OX=3656 GN=LOC103487448 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 3.2e-42 Identity = 109/143 (76.22%), Postives = 117/143 (81.82%), Query Frame = 0
BLAST of Carg09915 vs. TAIR 10
Match: AT3G15760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 3.2e-10 Identity = 53/129 (41.09%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of Carg09915 vs. TAIR 10
Match: AT1G52565.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 59.3 bits (142), Expect = 2.7e-09 Identity = 43/115 (37.39%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of Carg09915 vs. TAIR 10
Match: AT2G35850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52360.1); Has 42 Blast hits to 42 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 3.4e-04 Identity = 24/62 (38.71%), Postives = 38/62 (61.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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