Carg09902 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09902
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger CCCH domain-containing protein 34-like isoform X1
Location	Carg_Chr10: 2618878 .. 2622178 (-)
RNA-Seq Expression	Carg09902
Synteny	Carg09902

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGAAGGTTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGTCGGCTTTTCTCGCTTAATAAATAACAATCGTACCCCTTTTCACGTTACAATTCCTTCTCGATGTGAACACCGGAGAATTTGGTTCATGCTTCCATTATCTTATCACTACTGTGAGGATCTTGCTCTGCATTTGAAGGATTTTTTGTTGCATTCCGTCGAAATGCATCGGCATGATTATGTGTTTGAATTTACGCTGTCGATCATTAGATTTCTCGGTATTAATGTGGAATCGGGTTTTCGTGTTTATGTTTATGCATCGGCAACTGTTTTTTTTTCAGGGTTTTGATTGTGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTAAATGCAGCCTGTGGTTTTCGGCATCCGGTAAGCTGATTATCTGTTTGTTAATATTCACCTGAGCTTGGTTGCAGTCGGTGCCTGATTCATCTACCTTGTTTATACATGTTTAGCAATGAAACTTGTTTGGTCTGAACACTTTCTTTGAATCCTCCAAGACTAAATTTAGGTTGAATTTACTGCCATTTTGTTGAAATTCTTTTCCTGGTTCTCAAGTTTGCATAGGCCCTGTTCTGCTTTTGCTTGAAGGCTCAATCGCCATAGCTTTGGTATCTGTAATCACAAATTTGTGCATGTTAGGATGCAACTAAGAACATAGTTTTTTGTTTTGTAAATTTCATTTTGGAATGCAAGTTGTTTGGAAAGTAAGCAATGTTCTAGAGGATTTATTGTGCTAATTTAAGACATAAATTGAGGAAGTGATACTGTTTTTGGTTACTTTGTCATGCAATAAACAGCAGTGGTTCTCATCTTTACGGATGGATCCAAGAGCTAACTATCTACCCCGAAGGAGGTGGATTTTGAGATCCCACATCGGTTGGGGAGGAGAACGAACATTCTTTGTAAGGGTGTGGAAACCTCTCCCTAGCGTGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGTGAAAGCCCAAAGAGAACAAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCGTGTGAGGGGAAGCCCTTGAAAGCCCAAGAGAACAAACGAAACATTCTTTATAAGGGTGTGAGGTGTCTTAAAAAACCTTGAAGCCCGAAAGTGAAAGCCCAAAGAGAACAATATCTCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAACGCGTTTTAAAAACCTTGAGAGGAAGCCTGAAAGTAAAACCCCAAAGAGAACAATATCTCGGTTGGGGAGGAGAACGAAACATTCTTTATAGAGGTGTGGAAATCTCTCCCTAACGTGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGTGAAAGCCCAAAGAGAACAATATCTCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTAGAAACCTCTCCCTAACGTGTTTTAAAAACCTTGAGGGGAAGCCCAAAAGTGAAACTCCAAAGAGAACAATATCAGCTAGCGGTGAACTTGGGCCGTTACACAAAGAATCTCATGCATTCCAGTAGATTGTTACAAATGCAAATATTATAATGTTTCGTTGACCTTGTTCTAGGTGGTGAACACAAGTAATAATAAGAACTTGGGCCCTTACCTTGTGATTATCAATTTAAGTTGATGGTCTTCTAGGAACTTTATCATGCTCTCATTATGTAATACCATTGTGTTTAAAATTTTTGTTTTCCTTTTTCTCCTTAGCCAATGGATAGTCCTGCTGGAGCAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACAATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCTTATTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGCGGCAACGCGTCGTCCTCTGAAGATAAAACAGCTTCCGGGAACAAAAAAGGACTAGCCTCTACCAACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCAAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATGTACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTAGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGATCCAGAGTACATCCTGTCAACGAATCTGGAGCAAAGAGAACTGGATACTGGATTGTGCAGGGAAAACTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACCCTCGTGAATCTAGATTCGGAGGAATGGAACCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGTAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCGATTGTCATGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGTATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCGTTCAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAATACGCTCCGACCAGACCACAACAAACATTGTCAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCATTGGTTGAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGCCGTTCGATCGGAGCTGCATCATCCTCAACCGACTTTAGAGGGCCAAAACCTTTAAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGGAGGGGCTGGTGAAGGAAATGAATAGAAATCATATATTGCTTTAG

mRNA sequence

ATGGGGGAAGGTTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGGTTTTGATTGTGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTAAATGCAGCCTGTGGTTTTCGGCATCCGCCAATGGATAGTCCTGCTGGAGCAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACAATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCTTATTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGCGGCAACGCGTCGTCCTCTGAAGATAAAACAGCTTCCGGGAACAAAAAAGGACTAGCCTCTACCAACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCAAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATGTACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTAGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGATCCAGAGTACATCCTGTCAACGAATCTGGAGCAAAGAGAACTGGATACTGGATTGTGCAGGGAAAACTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACCCTCGTGAATCTAGATTCGGAGGAATGGAACCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGTAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCGATTGTCATGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGTATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCGTTCAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAATACGCTCCGACCAGACCACAACAAACATTGTCAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCATTGGTTGAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGCCGTTCGATCGGAGCTGCATCATCCTCAACCGACTTTAGAGGGCCAAAACCTTTAAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGGAGGGGCTGGTGAAGGAAATGAATAGAAATCATATATTGCTTTAG

Coding sequence (CDS)

ATGGGGGAAGGTTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGGTTTTGATTGTGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTAAATGCAGCCTGTGGTTTTCGGCATCCGCCAATGGATAGTCCTGCTGGAGCAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACAATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCTTATTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGCGGCAACGCGTCGTCCTCTGAAGATAAAACAGCTTCCGGGAACAAAAAAGGACTAGCCTCTACCAACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCAAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATGTACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTAGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGATCCAGAGTACATCCTGTCAACGAATCTGGAGCAAAGAGAACTGGATACTGGATTGTGCAGGGAAAACTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACCCTCGTGAATCTAGATTCGGAGGAATGGAACCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGTAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCGATTGTCATGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGTATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCGTTCAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAATACGCTCCGACCAGACCACAACAAACATTGTCAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCATTGGTTGAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGCCGTTCGATCGGAGCTGCATCATCCTCAACCGACTTTAGAGGGCCAAAACCTTTAAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGGAGGGGCTGGTGAAGGAAATGAATAGAAATCATATATTGCTTTAG

Protein sequence

MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEEGLVKEMNRNHILL

Homology

[Close]

BLAST of Carg09902 vs. NCBI nr
Match: KAG7023534.1 (Zinc finger CCCH domain-containing protein 34, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1118.6 bits (2892), Expect = 0.0e+00
Identity = 553/553 (100.00%), Postives = 553/553 (100.00%), Query Frame = 0


Query: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
           PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
           SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEE
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEE 540

Query: 541 GLVKEMNRNHILL 554
           GLVKEMNRNHILL
Sbjct: 541 GLVKEMNRNHILL 553

[Close]

BLAST of Carg09902 vs. NCBI nr
Match: KAG6589862.1 (Zinc finger CCCH domain-containing protein 34, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1109.7 bits (2869), Expect = 0.0e+00
Identity = 551/553 (99.64%), Postives = 552/553 (99.82%), Query Frame = 0


Query: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
           PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
           SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST+FRGPKPLSDILKDKRKVEEEEEE
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540

Query: 541 GLVKEMNRNHILL 554
            LVKEMNRNHILL
Sbjct: 541 -LVKEMNRNHILL 552

[Close]

BLAST of Carg09902 vs. NCBI nr
Match: XP_023516193.1 (zinc finger CCCH domain-containing protein 34-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1090.5 bits (2819), Expect = 0.0e+00
Identity = 541/553 (97.83%), Postives = 545/553 (98.55%), Query Frame = 0


Query: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGE LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
           PPMDSPAG VLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLAST+ADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHD+PEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
           SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISR SPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTL NMSRKSISREPVVRDH  NPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST+FRGPKPLSDILKDKRKVEEEEEE
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540

Query: 541 GLVKEMNRNHILL 554
            LVKEMN NHILL
Sbjct: 541 ELVKEMNSNHILL 553

[Close]

BLAST of Carg09902 vs. NCBI nr
Match: XP_022961048.1 (zinc finger CCCH domain-containing protein 34-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 542/553 (98.01%), Postives = 545/553 (98.55%), Query Frame = 0


Query: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGE LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
           PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLAST+ADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSH+HAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHDDPEYILSTNLEQRE D GLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
           SGNRSIVSLSRRRN+LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPT PQQTLSNMSRKSISREPVVRD  LNPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEE 
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEE- 540

Query: 541 GLVKEMNRNHILL 554
            LVKEMNRNHILL
Sbjct: 541 -LVKEMNRNHILL 551

[Close]

BLAST of Carg09902 vs. NCBI nr
Match: XP_022987654.1 (zinc finger CCCH domain-containing protein 34-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1045.8 bits (2703), Expect = 1.3e-301
Identity = 524/553 (94.76%), Postives = 531/553 (96.02%), Query Frame = 0


Query: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGE LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIAR+NPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARVNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
           PPMDSPAG VLESS CSVPVNKTIIPCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGTVLESSLCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGL ST+ADAFLHPSK VA PKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLDSTDADAFLHPSKKVACPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDEL+SSSPAVGSNDSTSHVHAVADQ YEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELLSSSPAVGSNDSTSHVHAVADQRYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHDDPEY+LSTNLEQRELDTGLCRENFEDHIAYE MHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYVLSTNLEQRELDTGLCRENFEDHIAYESMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPR KLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRRKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
           SGNRSIVSLSRRRN LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISR SPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNGLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTL +MSRKSI REPVVRD   N KSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLDMSRKSILREPVVRDRGFNLKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSS DFRGPK LSDILKDKRKVEEEE  
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSADFRGPKALSDILKDKRKVEEEE-- 540

Query: 541 GLVKEMNRNHILL 554
            LVKEMNR+HILL
Sbjct: 541 -LVKEMNRHHILL 550

[Close]

BLAST of Carg09902 vs. ExPASy Swiss-Prot
Match: Q6AT25 (Zinc finger CCCH domain-containing protein 34 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0176400 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.8e-36
Identity = 163/542 (30.07%), Postives = 229/542 (42.25%), Query Frame = 0


Query: 6   RKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDS 65
           R+ NTDCVYFLASP TC KG  CEYRH++ AR N R+C+YW  GNC+N +C FRHPP+++
Sbjct: 14  RRCNTDCVYFLASPFTCTKGSKCEYRHADGARFNRRNCWYWFKGNCVNPSCTFRHPPLEN 73

Query: 66  ---PAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS 125
                      S CS  V K   PCYFY+N  CSKGD C YLH                S
Sbjct: 74  LNKTKSLADPLSLCSTSV-KAANPCYFYYNSHCSKGDNCPYLH------------EPLTS 133

Query: 126 GNASSSEDKTASGNKKGLASTNADAFLHPSKN-VAGPKIDVTFQCSSLGQPSENVSHQSA 185
            +A  +  K  + N     S   D  +  SK+ +  P  D +     +   S N     A
Sbjct: 134 NDAVGTSCKATTSNPAVSKSYVGDEMVEESKDTITNPCQDTSCHIKEV-PVSINPEFGEA 193

Query: 186 SAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTE--EGNLSPGF 245
            A    LE     +DE +  S             AV+D +  +   D TE  E + SPGF
Sbjct: 194 EAVSGALE-TSTDIDEYMKCS-------------AVSDLNSGDSTMDHTEQDERDSSPGF 253

Query: 246 DVVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEM 305
           DV+V D    L++  D E+ L+T  + + L          D + Y+        +Y H+ 
Sbjct: 254 DVLVDD---CLSNKSDLEHQLTTESDNKVLH---AEYGIRDPVLYD--------MYYHDP 313

Query: 306 HSYNHLETEPVLFNDRN---IISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQ 365
             YN+ E E    +DR     +  P G         +  +TL +L  +   + ++ S   
Sbjct: 314 EYYNY-EPEFCGLDDRQGYLYLCQPNG-----AHEHESEITLGHLLPQ---NTEVTSDEY 373

Query: 366 RDSVSGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPEN 425
                  R+  S     N +        +  R+P   +   G++  +   K SR   P+N
Sbjct: 374 DRRFFNPRNFTSSVADTNFVHQHTQIRHISKRRPENRKGAKGKKDCI---KRSRCLEPKN 433

Query: 426 ITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKS 485
            T      Q      +RQ +     D      PQ       R    +    + H L+ KS
Sbjct: 434 ST------QQIESMPTRQRK-----DYLMGECPQPANHATFRGRRKKNRGKQQHVLSAKS 488

Query: 486 -----VPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDK 534
                  F GPKTL+QIKEEK K   N  FS     +    S S DF GPK L+++L  K
Sbjct: 494 SEHPTADFTGPKTLAQIKEEKCK--SNSSFSHSTACTPNVRSFSDDFEGPKSLTELLMTK 488

[Close]

BLAST of Carg09902 vs. ExPASy Swiss-Prot
Match: Q6K977 (Zinc finger CCCH domain-containing protein 19 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0831100 PE=2 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 4.4e-34
Identity = 160/571 (28.02%), Postives = 234/571 (40.98%), Query Frame = 0


Query: 3   EGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           E  R+R+TDC+YFLASPLTCKKG +CEYRHS+ AR+NPRDC+YW  GNC N  C FRHPP
Sbjct: 13  EARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFNGNCANPKCSFRHPP 72

Query: 63  MDSPAGAVL-------ESSQCSVPVNKTI-----------IPCYFYFNGCCSKGDTCSYL 122
           +D   GA          + Q SVP    +           +PCY++  G C KGD C++L
Sbjct: 73  LDGLVGAPTTPRTSQQSAPQVSVPAQAPVPNPASGTAKQGVPCYYFQKGMCVKGDRCAFL 132

Query: 123 HANDI--SLATRSTKTVFPSGNASSSEDKTASGNKKGLASTNAD--AFLHPSKNVAGPKI 182
           H      S A + T  VF   +    + K +       A  NA    F  P  +    K 
Sbjct: 133 HLPQATGSPAPQHTTKVFAPASVPHPQLKNSWTKPNSSAQQNAPPAIFDKPKDSAHNGKT 192

Query: 183 DVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQ 242
                 ++    S  + H    + +         V +     P+ G + + + V     +
Sbjct: 193 AQKQNLTNRAGHSSGIIHDKKGSYM------PSGVTKNYRPPPSTGDDLAENGVE--MGE 252

Query: 243 SYEEPMTDSTEEGNLSPGFDVVVGDGSGNL--ASHDDPEYILSTNLEQRELDTGLCRENF 302
              EP          SPG DV+ G    N   +  +D      TN EQ     G+ R+  
Sbjct: 253 FVREP----------SPGSDVLTGGADDNTEQSLREDRGAYRRTNGEQH---IGMLRQT- 312

Query: 303 EDHIAYEPMH--SDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 362
            D   +E  H  S  +LL E     ++  E  P+  +  ++    R +L+K       R 
Sbjct: 313 HDSYGFERSHRGSAEKLLSESR---FSQREPMPLTADSSDL----RQRLLKQRRLNNPRS 372

Query: 363 TLV----NLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGL 422
             V    N+  E+  H   R   QR     +   VS SR R R+       F    + GL
Sbjct: 373 GQVSDRHNVYPEDERHDRHR---QRGEEQASNDGVSSSRLRGRIRLPAETTF---DRLGL 432

Query: 423 YQPPLGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQT 482
            QP   R      G  +R+SPP                        G   +    +P + 
Sbjct: 433 -QPEKER----DRGPRARLSPPSQTDLR------------------GKLHDRLKAKPNED 492

Query: 483 LSNMSRKSISREPVVRDHWLNPKSVPFKGPKTLSQIKEEK-----RKVEENGGFSIEKRR 536
           +S   + S+S+         + +S+ F GPK+L+++K +K      K   +    +    
Sbjct: 493 VSGNVQSSLSKANE------DAESLNFAGPKSLAELKAKKVAGSLMKSSRSLTGPVRMTS 519

[Close]

BLAST of Carg09902 vs. ExPASy Swiss-Prot
Match: Q0J952 (Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0671800 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-32
Identity = 165/586 (28.16%), Postives = 239/586 (40.78%), Query Frame = 0


Query: 7   KRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDSP 66
           +RNTDCVYFLASPLTCKKG +C++RHS+ AR+NPRDC+YWL  NCLN  C FRHPP+D  
Sbjct: 32  RRNTDCVYFLASPLTCKKGNECDFRHSDNARMNPRDCWYWLNSNCLNPKCPFRHPPIDGM 91

Query: 67  AGA------VLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 126
            GA       + S        K ++PCY++  G C KGD C++ H    S+    ++ V 
Sbjct: 92  FGAPTTGMPAVSSHYAPFNSGKQLVPCYYFKKGNCLKGDRCAFYHGPQ-SVGNNPSEQVV 151

Query: 127 PSGNASSSEDKTAS----GNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENV 186
              +    + +T      G K  + STN+     P  N  G       + +     +  V
Sbjct: 152 KVSSLPLEQLQTQKNDLLGIKDSVQSTNSIQHGAPITNERGK--TAVDRSTVNSARTATV 211

Query: 187 SHQSASAKILLLECEKV------AVDELVSSS-----PAVGSNDSTSHVHAVAD--QSYE 246
           +   AS  +   + EKV      A+ E  ++S     P    N        V D  QSYE
Sbjct: 212 AIPVASNAMSCPKSEKVKSSTPAALKESFTTSSGGDHPECYQNHFPMDSDPVRDWNQSYE 271

Query: 247 EPMTDSTEE---------GNLSPGFDVVV-GDGSGNLASHDDPEYILSTNLEQRELDTGL 306
            P  D   +         G  SPGFDV+V  D  G    HD+              D G 
Sbjct: 272 MPPADDLPQNSREADELLGESSPGFDVLVDNDADGAAYLHDE--------------DFGG 331

Query: 307 CRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVL------FNDRNIISCPRGKLIK 366
                ED   YE   +D ++   HE   +N ++ +  +      +  +   S  R   ++
Sbjct: 332 DMYPVED---YEYAPADFDVRAHHERERFNGMDEQDQMGHMYDGYERKRRRSSERS--ME 391

Query: 367 SMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNRLSCRMSGNFVKP 426
             F  ++R    + D  E + +DLR  L+R  +  N S +++S  RN    R    + + 
Sbjct: 392 RPFHSERRFLQRDRDRVEMDGSDLRHRLRRRRI--NESSLAISPERNGEQRRRDERY-RE 451

Query: 427 RKPG------LYQPPLGRRLALQVG---KISRVSPPENITFSNGFSQYGSFR-------- 486
           R  G       +Q   G  L+ ++    K+   SP    T S         R        
Sbjct: 452 RAHGHRSHRDHHQSSRGSTLSSRLQGRIKLPGRSPDRVDTRSEKERDRRRLRDRLSPVRR 511

Query: 487 ---HSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFKGPKTLSQ 534
                 +HR  G ++E       QT    S  ++        H    K VP         
Sbjct: 512 TEFQGTRHREAGQHEE-------QTQRRSSELALGSRNADGQHL--TKDVP--DSHNFPH 571

[Close]

BLAST of Carg09902 vs. ExPASy Swiss-Prot
Match: Q9ZUM0 (Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=At2g02160 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.3e-30
Identity = 123/377 (32.63%), Postives = 172/377 (45.62%), Query Frame = 0


Query: 3   EGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           E   K NTDCVYFLASPLTCKKG +CEYRHSE AR+NPRDCYYWL GNCLN  CGFRHPP
Sbjct: 26  EDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHPP 85

Query: 63  MD--------SPAGAV--LESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHA-NDISL 122
           ++        +PA +V  + ++     V K  +PC F+  G C KGD CS+LH  N  + 
Sbjct: 86  LEGLLGNQGGAPAVSVQPIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLHTPNPAAY 145

Query: 123 ATRSTKTVFPSGNASSSEDKTASG-NKKGLASTNADAFLHPSKNV-AGPKIDVTFQCSSL 182
             +      P+ +   S+    +   +K L   N    +    ++ A P++  T    S 
Sbjct: 146 KKQHPVEAKPATDPQCSKKPIENNTEEKKLPDVNLSKVVKGHTDISAAPRVASTGLRDSR 205

Query: 183 GQPSENVSHQSASAKILLLECEKVAVDELVSSSPAV---GSNDSTS-HVHAVADQSYEEP 242
                  +H      +        +  E   S+  +   GS+D+ S H    AD    E 
Sbjct: 206 SVEGYIPNHVGYEPVVQRKGPGFPSFTEGGHSTQLLQKYGSDDNNSFHNGKDADDVLRES 265

Query: 243 MTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYE 302
                     SPGFDV+V + +G      D EY    ++E R       R N E    Y+
Sbjct: 266 ----------SPGFDVLVDNEAG------DSEYY---HVEDRYGRRSQERGNSE----YD 325

Query: 303 PMHS-----DLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVN 358
           P  S     D E L E    SY+  E     +  R + S    +L + ++++ +R     
Sbjct: 326 PDFSAIADGDKEALREQRFDSYDRREDRG--WGHRRVSSEREDRLDRRVYAEDER----- 370

[Close]

BLAST of Carg09902 vs. ExPASy Swiss-Prot
Match: Q5ZJJ1 (Zinc finger CCCH domain-containing protein 11A OS=Gallus gallus OX=9031 GN=ZC3H11A PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.0e-07
Identity = 39/134 (29.10%), Postives = 57/134 (42.54%), Query Frame = 0


Query: 5   LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMD 64
           + K+  DC ++  S  TC KG +C +RH E A  N   C  W  G C    C FRH  +D
Sbjct: 1   MSKQGDDCYFYFYS--TCNKGDNCPFRHCEAALGNETICTLWKEGRCFRNVCRFRHMEID 60

Query: 65  SPAGAVLESSQCSVPVNKTIIPCYFYFN-GCCSKGDTCSYLHAND---ISLATRSTKTVF 124
                            ++ IPC++    G C K + C++ H        L    +KT  
Sbjct: 61  K---------------KRSEIPCFWENQPGGCQKSN-CAFHHTKGRYVDGLFLPPSKTTL 116

Query: 125 PSGNASSSEDKTAS 135
           PS   S+ +D  A+
Sbjct: 121 PSPPESADDDLKAA 116

[Close]

BLAST of Carg09902 vs. ExPASy TrEMBL
Match: A0A6J1HAR9 (zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)

HSP 1 Score: 1087.8 bits (2812), Expect = 0.0e+00
Identity = 542/553 (98.01%), Postives = 545/553 (98.55%), Query Frame = 0


Query: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGE LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
           PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLAST+ADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSH+HAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHDDPEYILSTNLEQRE D GLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
           SGNRSIVSLSRRRN+LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPT PQQTLSNMSRKSISREPVVRD  LNPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEE 
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEE- 540

Query: 541 GLVKEMNRNHILL 554
            LVKEMNRNHILL
Sbjct: 541 -LVKEMNRNHILL 551

[Close]

BLAST of Carg09902 vs. ExPASy TrEMBL
Match: A0A6J1JJH0 (zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485142 PE=4 SV=1)

HSP 1 Score: 1045.8 bits (2703), Expect = 6.3e-302
Identity = 524/553 (94.76%), Postives = 531/553 (96.02%), Query Frame = 0


Query: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGE LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIAR+NPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARVNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120
           PPMDSPAG VLESS CSVPVNKTIIPCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGTVLESSLCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGL ST+ADAFLHPSK VA PKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLDSTDADAFLHPSKKVACPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDEL+SSSPAVGSNDSTSHVHAVADQ YEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELLSSSPAVGSNDSTSHVHAVADQRYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHDDPEY+LSTNLEQRELDTGLCRENFEDHIAYE MHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYVLSTNLEQRELDTGLCRENFEDHIAYESMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPR KLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRRKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420
           SGNRSIVSLSRRRN LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISR SPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNGLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTL +MSRKSI REPVVRD   N KSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLDMSRKSILREPVVRDRGFNLKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSS DFRGPK LSDILKDKRKVEEEE  
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSADFRGPKALSDILKDKRKVEEEE-- 540

Query: 541 GLVKEMNRNHILL 554
            LVKEMNR+HILL
Sbjct: 541 -LVKEMNRHHILL 550

[Close]

BLAST of Carg09902 vs. ExPASy TrEMBL
Match: A0A6J1JK29 (zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485142 PE=4 SV=1)

HSP 1 Score: 1005.0 bits (2597), Expect = 1.2e-289
Identity = 524/648 (80.86%), Postives = 531/648 (81.94%), Query Frame = 0


Query: 1   MGEGLRKRNTDCVYFLASPLTCKK------------------------------------ 60
           MGE LRKRNTDCVYFLASPLTCKK                                    
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKVSFSCLINNNRTSFHVTIPSRCEHRGIWLMLPLSYH 60

Query: 61  -----------------------------------------------------------G 120
                                                                      G
Sbjct: 61  YCEDLALHLKDFLLHSLEMHRRDYVFEFTLSIIRFLGFNVESAFRVYVYVMNMATIFFQG 120

Query: 121 FDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDSPAGAVLESSQCSVPVNKTII 180
           FDCEYRHSEIAR+NPRDCYYWLAGNCLNAACGFRHPPMDSPAG VLESS CSVPVNKTII
Sbjct: 121 FDCEYRHSEIARVNPRDCYYWLAGNCLNAACGFRHPPMDSPAGTVLESSLCSVPVNKTII 180

Query: 181 PCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTNA 240
           PCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGL ST+A
Sbjct: 181 PCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLDSTDA 240

Query: 241 DAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAV 300
           DAFLHPSK VA PKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDEL+SSSPAV
Sbjct: 241 DAFLHPSKKVACPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELLSSSPAV 300

Query: 301 GSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLE 360
           GSNDSTSHVHAVADQ YEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEY+LSTNLE
Sbjct: 301 GSNDSTSHVHAVADQRYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYVLSTNLE 360

Query: 361 QRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKL 420
           QRELDTGLCRENFEDHIAYE MHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPR KL
Sbjct: 361 QRELDTGLCRENFEDHIAYESMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRRKL 420

Query: 421 IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNRLSCRMSGNFV 480
           IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRN LSCRMSGNFV
Sbjct: 421 IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNGLSCRMSGNFV 480

Query: 481 KPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA 540
           KPRKPGLYQPPLGRRLALQVGKISR SPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA
Sbjct: 481 KPRKPGLYQPPLGRRLALQVGKISRGSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA 540

Query: 541 PTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEK 554
           PTRPQQTL +MSRKSI REPVVRD   N KSVPFKGPKTLSQIKEEKRKVEENGGFSIEK
Sbjct: 541 PTRPQQTLLDMSRKSILREPVVRDRGFNLKSVPFKGPKTLSQIKEEKRKVEENGGFSIEK 600

[Close]

BLAST of Carg09902 vs. ExPASy TrEMBL
Match: A0A6J1HCV5 (zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)

HSP 1 Score: 947.2 bits (2447), Expect = 3.1e-272
Identity = 481/491 (97.96%), Postives = 484/491 (98.57%), Query Frame = 0


Query: 63  MDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS 122
           MDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS
Sbjct: 1   MDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS 60

Query: 123 GNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS 182
           GNASSSEDKTASGNKKGLAST+ADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS
Sbjct: 61  GNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS 120

Query: 183 AKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFDVV 242
           AKILLLECEKVAVDELVSSSPAVGSNDSTSH+HAVADQSYEEPMTDSTEEGNLSPGFDVV
Sbjct: 121 AKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVV 180

Query: 243 VGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMHSY 302
           VGDGSGNLASHDDPEYILSTNLEQRE D GLCRENFEDHIAYEPMHSDLELLYEHEMHSY
Sbjct: 181 VGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSY 240

Query: 303 NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG 362
           NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG
Sbjct: 241 NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG 300

Query: 363 NRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNG 422
           NRSIVSLSRRRN+LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNG
Sbjct: 301 NRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNG 360

Query: 423 FSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFKGP 482
           FSQYGSFRHSRQHRPCGHYDEYAPT PQQTLSNMSRKSISREPVVRD  LNPKSVPFKGP
Sbjct: 361 FSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGP 420

Query: 483 KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEEGL 542
           KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEE  L
Sbjct: 421 KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEE--L 480

Query: 543 VKEMNRNHILL 554
           VKEMNRNHILL
Sbjct: 481 VKEMNRNHILL 489

[Close]

BLAST of Carg09902 vs. ExPASy TrEMBL
Match: A0A6J1HAV5 (uncharacterized protein LOC111461673 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)

HSP 1 Score: 874.4 bits (2258), Expect = 2.5e-250
Identity = 447/457 (97.81%), Postives = 450/457 (98.47%), Query Frame = 0


Query: 97  KGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVA 156
           KGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLAST+ADAFLHPSKNVA
Sbjct: 10  KGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVA 69

Query: 157 GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHA 216
           GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSH+HA
Sbjct: 70  GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHA 129

Query: 217 VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRE 276
           VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQRE D GLCRE
Sbjct: 130 VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRE 189

Query: 277 NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 336
           NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL
Sbjct: 190 NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 249

Query: 337 TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPP 396
           TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRN+LSCRMSGNFVKPRKPGLYQPP
Sbjct: 250 TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPP 309

Query: 397 LGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNM 456
           LGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPT PQQTLSNM
Sbjct: 310 LGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNM 369

Query: 457 SRKSISREPVVRDHWLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST 516
           SRKSISREPVVRD  LNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST
Sbjct: 370 SRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST 429

Query: 517 DFRGPKPLSDILKDKRKVEEEEEEGLVKEMNRNHILL 554
           DFRGPKPLSDILKDKRKVEEEEE  LVKEMNRNHILL
Sbjct: 430 DFRGPKPLSDILKDKRKVEEEEE--LVKEMNRNHILL 464

[Close]

BLAST of Carg09902 vs. TAIR 10
Match: AT2G02160.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 135.2 bits (339), Expect = 1.6e-31
Identity = 123/377 (32.63%), Postives = 172/377 (45.62%), Query Frame = 0


Query: 3   EGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           E   K NTDCVYFLASPLTCKKG +CEYRHSE AR+NPRDCYYWL GNCLN  CGFRHPP
Sbjct: 26  EDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHPP 85

Query: 63  MD--------SPAGAV--LESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHA-NDISL 122
           ++        +PA +V  + ++     V K  +PC F+  G C KGD CS+LH  N  + 
Sbjct: 86  LEGLLGNQGGAPAVSVQPIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLHTPNPAAY 145

Query: 123 ATRSTKTVFPSGNASSSEDKTASG-NKKGLASTNADAFLHPSKNV-AGPKIDVTFQCSSL 182
             +      P+ +   S+    +   +K L   N    +    ++ A P++  T    S 
Sbjct: 146 KKQHPVEAKPATDPQCSKKPIENNTEEKKLPDVNLSKVVKGHTDISAAPRVASTGLRDSR 205

Query: 183 GQPSENVSHQSASAKILLLECEKVAVDELVSSSPAV---GSNDSTS-HVHAVADQSYEEP 242
                  +H      +        +  E   S+  +   GS+D+ S H    AD    E 
Sbjct: 206 SVEGYIPNHVGYEPVVQRKGPGFPSFTEGGHSTQLLQKYGSDDNNSFHNGKDADDVLRES 265

Query: 243 MTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYE 302
                     SPGFDV+V + +G      D EY    ++E R       R N E    Y+
Sbjct: 266 ----------SPGFDVLVDNEAG------DSEYY---HVEDRYGRRSQERGNSE----YD 325

Query: 303 PMHS-----DLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVN 358
           P  S     D E L E    SY+  E     +  R + S    +L + ++++ +R     
Sbjct: 326 PDFSAIADGDKEALREQRFDSYDRREDRG--WGHRRVSSEREDRLDRRVYAEDER----- 370

The following BLAST results are available for this feature:

BLAST of Carg09902 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023534.1	0.0e+00	100.00	Zinc finger CCCH domain-containing protein 34, partial [Cucurbita argyrosperma s...	[more]
KAG6589862.1	0.0e+00	99.64	Zinc finger CCCH domain-containing protein 34, partial [Cucurbita argyrosperma s...	[more]
XP_023516193.1	0.0e+00	97.83	zinc finger CCCH domain-containing protein 34-like isoform X1 [Cucurbita pepo su...	[more]
XP_022961048.1	0.0e+00	98.01	zinc finger CCCH domain-containing protein 34-like isoform X1 [Cucurbita moschat...	[more]
XP_022987654.1	1.3e-301	94.76	zinc finger CCCH domain-containing protein 34-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg09902 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AT25	2.8e-36	30.07	Zinc finger CCCH domain-containing protein 34 OS=Oryza sativa subsp. japonica OX...	[more]
Q6K977	4.4e-34	28.02	Zinc finger CCCH domain-containing protein 19 OS=Oryza sativa subsp. japonica OX...	[more]
Q0J952	1.1e-32	28.16	Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica OX...	[more]
Q9ZUM0	2.3e-30	32.63	Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q5ZJJ1	6.0e-07	29.10	Zinc finger CCCH domain-containing protein 11A OS=Gallus gallus OX=9031 GN=ZC3H1...	[more]

BLAST of Carg09902 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAR9	0.0e+00	98.01	zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1JJH0	6.3e-302	94.76	zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1JK29	1.2e-289	80.86	zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1HCV5	3.1e-272	97.96	zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1HAV5	2.5e-250	97.81	uncharacterized protein LOC111461673 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Carg09902 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02160.1	1.6e-31	32.63	CCCH-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 82..107 e-value: 0.69 score: 17.6 coord: 7..34 e-value: 0.097 score: 21.8 coord: 39..62 e-value: 0.14 score: 21.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 6..35 score: 10.511662
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 37..63 score: 9.751145
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 81..108 score: 12.783824
None	No IPR available	GENE3D	4.10.1000.10		coord: 3..64 e-value: 1.8E-9 score: 39.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 497..525
None	No IPR available	PANTHER	PTHR15725:SF0	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32-LIKE	coord: 1..533
None	No IPR available	PANTHER	PTHR15725	ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING	coord: 1..533
IPR041686	Zinc-finger CCCH domain	PFAM	PF15663	zf-CCCH_3	coord: 6..63 e-value: 9.0E-11 score: 42.0
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 81..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09902-RA	Carg09902-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding