Carg09875 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09875
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Auxin-responsive protein
Location	Carg_Chr10: 2763830 .. 2765205 (-)
RNA-Seq Expression	Carg09875
Synteny	Carg09875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATTCACAACCCAAGAGAGATACAGAAACAGACAAAGGAGTGTGCAACAATGTCGACGTCGGAGACGGTTCCACAGTCGCCGGAATCCGATATGACCCAAATCAGCTTCGACGAAACTGAGCTCACCTTGGGACTTCCCGGAAACAAAGTGAACGCCAAGCGTGGCTTCCACAACACGGTCGATGCCGGTGTCGGGAGCTCGACAAGTGAACCGAGGGACGGTCGCAACGAGCCAGAACTCGTCTCTTCTGGCGATGGTAAGTTTTAACATAGATTATATAAAGCTTATGGACTTGACTTGACACTTTTGAGTATGACGTGGAATGTTATGATTTGGTTTTGTAGGGCAAAAGCGGGCGGTAATGGGTTGGCCGCCGGTGAGATCATATAGAAGAAAGACAATAGAAATGAGGTGCAAGTATGTCAAAGTTGCGGCTGATGGGGCGCCGTATCTGCGTAAGCTCGACCTTGAGATGTTCAATGGCTATCAAGACCTATTCATTGCATTTGAGGAATTGTTCACCTCCTTTCCCATATGTTGTGAGTTCATAACTTACTAACTCTTCTTCATTATTATTATCATACCATGTCGGGATTGAACAATTTGACGGCCCTTAGGTCGGTAAAAAGTGTCTTATCTATTTAGTTACGCATGAAAATCACTTCGTTGCTCAGTATGGTTGATACAATGCAACCGACATTTTTCTATCTAATGATCATCGTATTTTGAGATGGGCAATGATGGAATGATAGTACAGATGTGTGAGATCTCACATCGGTTGGGGAGGAGAACGAAACATTCTACATAAGAGTGTGGAAACCTCTATCTAGCAAACGTATTTTAAAGTGAATGCCAAAAAGAGTGTCATATCTCTTATAGATATACGTGTGTTTTAGGTGATTACTTGGAAGAAGGGAACAATTTGAACCCAATGAAGAGAGGGGATGAGTACTTACCAACTTATGAAGATAAAGATGGGGATTGGATGTTAGTCGGAGATGTCCCATGGAAGTAAGTCTGATCATCATTATTTTTTAATCTTGGTTAATTAACTAACTAATTAATTAATTAATTAACCTTCTCCATTCTAATCGTATTGCAAAATGTGCAGATTATTTATTGAATCTTGCAAACGTATTCGTTTGATGAAGGGTTCAGATACCATTGGGGCAGGTAAAGTAGTGTTTTTAATTAAGAAAATCATCTTGTTCCATAATTATTATTCAAATTAACAGTTTGTGGGTTCACTTATATGCAGCTCCAAGAACACCATGAAAAGGAGAAAAGGAGAGAGGGGGGAGGATGTTTTTGGATGGGCAGCTTTTTTCTTTTTTCTTTTTTAATTTATTTTTGCAGTCATGGCATTGCCTTAA

mRNA sequence

ATTATTCACAACCCAAGAGAGATACAGAAACAGACAAAGGAGTGTGCAACAATGTCGACGTCGGAGACGGTTCCACAGTCGCCGGAATCCGATATGACCCAAATCAGCTTCGACGAAACTGAGCTCACCTTGGGACTTCCCGGAAACAAAGTGAACGCCAAGCGTGGCTTCCACAACACGGTCGATGCCGGTGTCGGGAGCTCGACAAGTGAACCGAGGGACGGTCGCAACGAGCCAGAACTCGTCTCTTCTGGCGATGGGCAAAAGCGGGCGGTAATGGGTTGGCCGCCGGTGAGATCATATAGAAGAAAGACAATAGAAATGAGGTGCAAGTATGTCAAAGTTGCGGCTGATGGGGCGCCGTATCTGCGTAAGCTCGACCTTGAGATGTTCAATGGCTATCAAGACCTATTCATTGCATTTGAGGAATTGTTCACCTCCTTTCCCATATGTTATAAAGATGGGGATTGGATGTTAGTCGGAGATGTCCCATGGAAATTATTTATTGAATCTTGCAAACGTATTCGTTTGATGAAGGGTTCAGATACCATTGGGGCAGTCATGGCATTGCCTTAA

Coding sequence (CDS)

ATGTCGACGTCGGAGACGGTTCCACAGTCGCCGGAATCCGATATGACCCAAATCAGCTTCGACGAAACTGAGCTCACCTTGGGACTTCCCGGAAACAAAGTGAACGCCAAGCGTGGCTTCCACAACACGGTCGATGCCGGTGTCGGGAGCTCGACAAGTGAACCGAGGGACGGTCGCAACGAGCCAGAACTCGTCTCTTCTGGCGATGGGCAAAAGCGGGCGGTAATGGGTTGGCCGCCGGTGAGATCATATAGAAGAAAGACAATAGAAATGAGGTGCAAGTATGTCAAAGTTGCGGCTGATGGGGCGCCGTATCTGCGTAAGCTCGACCTTGAGATGTTCAATGGCTATCAAGACCTATTCATTGCATTTGAGGAATTGTTCACCTCCTTTCCCATATGTTATAAAGATGGGGATTGGATGTTAGTCGGAGATGTCCCATGGAAATTATTTATTGAATCTTGCAAACGTATTCGTTTGATGAAGGGTTCAGATACCATTGGGGCAGTCATGGCATTGCCTTAA

Protein sequence

MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRNEPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDLFIAFEELFTSFPICYKDGDWMLVGDVPWKLFIESCKRIRLMKGSDTIGAVMALP

Homology

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BLAST of Carg09875 vs. NCBI nr
Match: KAG7023561.1 (Auxin-responsive protein IAA11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358.6 bits (919), Expect = 3.0e-95
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN 60
           MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN
Sbjct: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN 60

Query: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120
           EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL
Sbjct: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120

Query: 121 FIAFEELFTSFPICYKDGDWMLVGDVPWKLFIESCKRIRLMKGSDTIGAVMALP 175
           FIAFEELFTSFPICYKDGDWMLVGDVPWKLFIESCKRIRLMKGSDTIGAVMALP
Sbjct: 121 FIAFEELFTSFPICYKDGDWMLVGDVPWKLFIESCKRIRLMKGSDTIGAVMALP 174

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BLAST of Carg09875 vs. NCBI nr
Match: KAG6589890.1 (Auxin-responsive protein IAA11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 333.6 bits (854), Expect = 1.0e-87
Identity = 169/198 (85.35%), Postives = 169/198 (85.35%), Query Frame = 0


Query: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN 60
           MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN
Sbjct: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN 60

Query: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120
           EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL
Sbjct: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120

Query: 121 FIAFEELFTSFPICY------------------------KDGDWMLVGDVPWKLFIESCK 175
           FIAFEELFTSFPIC                         KDGDWMLVGDVPWKLFIESCK
Sbjct: 121 FIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVGDVPWKLFIESCK 180

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BLAST of Carg09875 vs. NCBI nr
Match: XP_023516646.1 (auxin-responsive protein IAA11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.8 bits (839), Expect = 5.7e-86
Identity = 165/198 (83.33%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN 60
           MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFH+TVDAGVGSSTSEPRDGRN
Sbjct: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHDTVDAGVGSSTSEPRDGRN 60

Query: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120
           EPEL++S DGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL
Sbjct: 61  EPELIASADGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120

Query: 121 FIAFEELFTSFPICY------------------------KDGDWMLVGDVPWKLFIESCK 175
           FIAFEELFTSFPIC                         KDGDWMLVGDVPWKLFIESCK
Sbjct: 121 FIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVGDVPWKLFIESCK 180

[Close]

BLAST of Carg09875 vs. NCBI nr
Match: XP_022961044.1 (auxin-responsive protein IAA11-like [Cucurbita moschata])

HSP 1 Score: 327.8 bits (839), Expect = 5.7e-86
Identity = 165/198 (83.33%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN 60
           MSTSETVPQSPESDM QISFDETELTLGLPGNKVNAKRGFH+TVDAGVGSSTSEPRDGRN
Sbjct: 1   MSTSETVPQSPESDMAQISFDETELTLGLPGNKVNAKRGFHDTVDAGVGSSTSEPRDGRN 60

Query: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120
           EPEL+SSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGY+DL
Sbjct: 61  EPELISSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYRDL 120

Query: 121 FIAFEELFTSFPICY------------------------KDGDWMLVGDVPWKLFIESCK 175
           FIAFEELFTSFPIC                         KDGDWMLVGDVPWKLFIESCK
Sbjct: 121 FIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVGDVPWKLFIESCK 180

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BLAST of Carg09875 vs. NCBI nr
Match: XP_022987877.1 (auxin-responsive protein IAA11-like [Cucurbita maxima])

HSP 1 Score: 325.9 bits (834), Expect = 2.2e-85
Identity = 165/198 (83.33%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN 60
           MSTSETVPQSPESDMTQISFDETELTLGLPGNK+NAKRGFH+TVD GV SSTSEPRDGRN
Sbjct: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKLNAKRGFHDTVDGGVWSSTSEPRDGRN 60

Query: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120
           EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL
Sbjct: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120

Query: 121 FIAFEELFTSFPICY------------------------KDGDWMLVGDVPWKLFIESCK 175
           FIAFEELFTSFPIC                         KDGDWMLVGDVPWKLFIESCK
Sbjct: 121 FIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVGDVPWKLFIESCK 180

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BLAST of Carg09875 vs. ExPASy Swiss-Prot
Match: Q75GK0 (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA11 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-31
Identity = 83/222 (37.39%), Postives = 109/222 (49.10%), Query Frame = 0


Query: 15  MTQISFDETELTLGLPG-----NKVNAKRGFHNTVD----------AGVGSSTSEPRDGR 74
           M  + FDETEL LGLPG      + + KRGF  T+D          A V        D  
Sbjct: 1   MAGLGFDETELRLGLPGAGELAARSSGKRGFAETIDLKLKLQPAAPAAVSGEEGAQEDKE 60

Query: 75  NEPELVSSGD-------------------------GQKRAVMGWPPVRSYRRKTIEMRCK 134
           +     ++ D                           K  V+GWPPVRS+R+  +  +CK
Sbjct: 61  DADAAAAAADEKMSMKRSASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRKNVLAEKCK 120

Query: 135 ---YVKVAADGAPYLRKLDLEMFNGYQDLFIAFEELFTSFPI--C--------------- 169
               VKV+ DGAPYLRK+D+ M+  Y +L +AF+ +FTSF I  C               
Sbjct: 121 AAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQQLKESNKLRDD 180

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BLAST of Carg09875 vs. ExPASy Swiss-Prot
Match: P93830 (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 6.7e-29
Identity = 82/213 (38.50%), Postives = 111/213 (52.11%), Query Frame = 0


Query: 17  QISFDETELTLGLPGNKVNA-----KRGFHNTVDAGVGSSTSEP--RDGRNEPELVSSGD 76
           +++  ETEL LGLPG    A     KRGF  TVD  + +  +EP  ++G    ++V+   
Sbjct: 6   ELNLRETELCLGLPGGDTVAPVTGNKRGFSETVDLKL-NLNNEPANKEGSTTHDVVTFDS 65

Query: 77  GQKRA-------------VMGWPPVRSYRRKTIEMRCK----------YVKVAADGAPYL 136
            +K A             V+GWPPVRSY RK + + C+          +VKV+ DGAPYL
Sbjct: 66  KEKSACPKDPAKPPAKAQVVGWPPVRSY-RKNVMVSCQKSSGGPEAAAFVKVSMDGAPYL 125

Query: 137 RKLDLEMFNGYQDLFIAFEELFTSFPI-----------------------------CY-- 169
           RK+DL M+  Y +L  A   +F+SF +                              Y  
Sbjct: 126 RKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYED 185

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BLAST of Carg09875 vs. ExPASy Swiss-Prot
Match: P13088 (Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28
Identity = 78/178 (43.82%), Postives = 99/178 (55.62%), Query Frame = 0


Query: 18  ISFDETELTLGLPG--------NKVNAKRGFHNTVDAGVGSSTSEPRDGRNEPELVSSGD 77
           +  + TEL LGLP         NK N K+   + +D GVG   S    G  + E      
Sbjct: 6   LGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET----- 65

Query: 78  GQKRAVMGWPPVRSYRRKTI--EMRCK-YVKVAADGAPYLRKLDLEMFNGYQDLFIAFEE 137
             K  V+GWPPV SYR+K    E   K YVKV+ DGAP+LRK+DL +  GY DL +A ++
Sbjct: 66  -NKSQVVGWPPVCSYRKKNSMNEGASKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDK 125

Query: 138 LFTSF---------------PICY-KDGDWMLVGDVPWKLFIESCKRIRLMKGSDTIG 169
           LF  +               PI   KDGDWMLVGDVPW++F+ESCKR+R+MK SD  G
Sbjct: 126 LFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDAKG 177

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BLAST of Carg09875 vs. ExPASy Swiss-Prot
Match: O24541 (Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-28
Identity = 76/178 (42.70%), Postives = 95/178 (53.37%), Query Frame = 0


Query: 18  ISFDETELTLGLPG----------NKVNAKRGFHNTVDAGVGSSTSEPRDGRNEPELVSS 77
           +  + TEL LGLPG             N KR F +      G ++S   DG+ E      
Sbjct: 6   LGLEITELRLGLPGAGGENNTDKDKNKNKKRVFSDI----EGENSSSEEDGKKE------ 65

Query: 78  GDGQKRAVMGWPPVRSYRRK-TIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDLFIAFEE 137
               K  V+GWPPV SYR+K T+     YVKV+ DGAP+LRK+DL M  GY DL  A ++
Sbjct: 66  ---TKNQVVGWPPVCSYRKKNTVNEPKLYVKVSMDGAPFLRKIDLAMHKGYSDLAFALDK 125

Query: 138 LFTSFPICY----------------KDGDWMLVGDVPWKLFIESCKRIRLMKGSDTIG 169
            F  + IC                 KDGDWMLVGDVPW++F ESCKR+R+MK SD  G
Sbjct: 126 FFGCYGICEALKDAENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSDAKG 170

[Close]

BLAST of Carg09875 vs. ExPASy Swiss-Prot
Match: O24407 (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.5e-28
Identity = 83/223 (37.22%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 18  ISFDETELTLGLPG--------NKVNAKRGFHNTVDAGVGSSTSEPRDGRNEPELVSSGD 77
           I+F+ TEL LGLPG         K N KRGF  TVD  +  S S   D  ++ +L +  +
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLS-STAMDSVSKVDLENMKE 61

Query: 78  -----GQKRAVMGWPPVRSYRRKTIE-----------------------------MRCKY 137
                  K  V+GWPPVRS+R+  +                                  Y
Sbjct: 62  KVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAY 121

Query: 138 VKVAADGAPYLRKLDLEMFNGYQDLFIAFEELFTSFPI---------------------- 169
           VKV+ DGAPYLRK+DL+++  YQDL  A  ++F+SF I                      
Sbjct: 122 VKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLN 181

[Close]

BLAST of Carg09875 vs. ExPASy TrEMBL
Match: A0A6J1HCV0 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461669 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.8e-86
Identity = 165/198 (83.33%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN 60
           MSTSETVPQSPESDM QISFDETELTLGLPGNKVNAKRGFH+TVDAGVGSSTSEPRDGRN
Sbjct: 1   MSTSETVPQSPESDMAQISFDETELTLGLPGNKVNAKRGFHDTVDAGVGSSTSEPRDGRN 60

Query: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120
           EPEL+SSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGY+DL
Sbjct: 61  EPELISSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYRDL 120

Query: 121 FIAFEELFTSFPICY------------------------KDGDWMLVGDVPWKLFIESCK 175
           FIAFEELFTSFPIC                         KDGDWMLVGDVPWKLFIESCK
Sbjct: 121 FIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVGDVPWKLFIESCK 180

[Close]

BLAST of Carg09875 vs. ExPASy TrEMBL
Match: A0A6J1JBK2 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485284 PE=3 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.1e-85
Identity = 165/198 (83.33%), Postives = 167/198 (84.34%), Query Frame = 0


Query: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRN 60
           MSTSETVPQSPESDMTQISFDETELTLGLPGNK+NAKRGFH+TVD GV SSTSEPRDGRN
Sbjct: 1   MSTSETVPQSPESDMTQISFDETELTLGLPGNKLNAKRGFHDTVDGGVWSSTSEPRDGRN 60

Query: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120
           EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL
Sbjct: 61  EPELVSSGDGQKRAVMGWPPVRSYRRKTIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDL 120

Query: 121 FIAFEELFTSFPICY------------------------KDGDWMLVGDVPWKLFIESCK 175
           FIAFEELFTSFPIC                         KDGDWMLVGDVPWKLFIESCK
Sbjct: 121 FIAFEELFTSFPICCDYLEEGNNLNPMKRGDEYLPTYEDKDGDWMLVGDVPWKLFIESCK 180

[Close]

BLAST of Carg09875 vs. ExPASy TrEMBL
Match: A0A5D3BM61 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00180 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.3e-62
Identity = 139/213 (65.26%), Postives = 152/213 (71.36%), Query Frame = 0


Query: 1   MSTSETVPQSPESDMTQISFDETELTLGLPG--------NKVNAKRGFHNTVDA-GVGSS 60
           MS+SETVP SPESD+TQI+FDETELTLGLPG        +K NAKR FH+TVDA GVGSS
Sbjct: 1   MSSSETVPDSPESDLTQINFDETELTLGLPGAEFRPTTHHKSNAKRCFHDTVDAGGVGSS 60

Query: 61  TSEPRDGR--NEPELVSSGDGQKRAVMGWPPVRSYRRKTIEMR----CKYVKVAADGAPY 120
           TS+PRD    +EP+  SSG+G+KRAVMGWPPVRSYR+KTIEM      KYVKV ADGAPY
Sbjct: 61  TSKPRDISLDDEPQHGSSGNGEKRAVMGWPPVRSYRKKTIEMNSTSATKYVKVGADGAPY 120

Query: 121 LRKLDLEMFNGYQDLFIAFEELFTSFPICY------------------------KDGDWM 175
           LRKLDL++FNGYQ LF AF  LFTSFPI                          KDGDWM
Sbjct: 121 LRKLDLQIFNGYQQLFDAFHHLFTSFPISCDYLEEGNNLNPVKRADEYLPTYEDKDGDWM 180

[Close]

BLAST of Carg09875 vs. ExPASy TrEMBL
Match: A0A5A7TIX8 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00060 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 139/213 (65.26%), Postives = 151/213 (70.89%), Query Frame = 0


Query: 1   MSTSETVPQSPESDMTQISFDETELTLGLPG--------NKVNAKRGFHNTVDAG-VGSS 60
           MS+SETVP SPESD TQI+FDETELTLGLPG        +K NAKR FH+TVDAG VGSS
Sbjct: 1   MSSSETVPDSPESDFTQINFDETELTLGLPGAEFRPTTHHKSNAKRCFHDTVDAGCVGSS 60

Query: 61  TSEPRDGR--NEPELVSSGDGQKRAVMGWPPVRSYRRKTIEMR----CKYVKVAADGAPY 120
           TS+PRD    +EP+  SSG+G+KRAVMGWPPVRSYR+KTIEM      KYVKV ADGAPY
Sbjct: 61  TSKPRDISLDDEPQHGSSGNGEKRAVMGWPPVRSYRKKTIEMNSTSATKYVKVGADGAPY 120

Query: 121 LRKLDLEMFNGYQDLFIAFEELFTSFPICY------------------------KDGDWM 175
           LRKLDL++FNGYQ LF AF  LFTSFPI                          KDGDWM
Sbjct: 121 LRKLDLQIFNGYQQLFDAFHHLFTSFPISCDYLEEGNNLNPVKRADEYLPTYEDKDGDWM 180

[Close]

BLAST of Carg09875 vs. ExPASy TrEMBL
Match: A0A1S3CKL8 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501531 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 139/213 (65.26%), Postives = 151/213 (70.89%), Query Frame = 0


Query: 1   MSTSETVPQSPESDMTQISFDETELTLGLPG--------NKVNAKRGFHNTVDAG-VGSS 60
           MS+SETVP SPESD TQI+FDETELTLGLPG        +K NAKR FH+TVDAG VGSS
Sbjct: 1   MSSSETVPDSPESDFTQINFDETELTLGLPGAEFRPTTHHKSNAKRCFHDTVDAGCVGSS 60

Query: 61  TSEPRDGR--NEPELVSSGDGQKRAVMGWPPVRSYRRKTIEMR----CKYVKVAADGAPY 120
           TS+PRD    +EP+  SSG+G+KRAVMGWPPVRSYR+KTIEM      KYVKV ADGAPY
Sbjct: 61  TSKPRDISLDDEPQHGSSGNGEKRAVMGWPPVRSYRKKTIEMNSTSATKYVKVGADGAPY 120

Query: 121 LRKLDLEMFNGYQDLFIAFEELFTSFPICY------------------------KDGDWM 175
           LRKLDL++FNGYQ LF AF  LFTSFPI                          KDGDWM
Sbjct: 121 LRKLDLQIFNGYQQLFDAFHHLFTSFPISCDYLEEGNNLNPVKRADEYLPTYEDKDGDWM 180

[Close]

BLAST of Carg09875 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-30
Identity = 82/213 (38.50%), Postives = 111/213 (52.11%), Query Frame = 0


Query: 17  QISFDETELTLGLPGNKVNA-----KRGFHNTVDAGVGSSTSEP--RDGRNEPELVSSGD 76
           +++  ETEL LGLPG    A     KRGF  TVD  + +  +EP  ++G    ++V+   
Sbjct: 6   ELNLRETELCLGLPGGDTVAPVTGNKRGFSETVDLKL-NLNNEPANKEGSTTHDVVTFDS 65

Query: 77  GQKRA-------------VMGWPPVRSYRRKTIEMRCK----------YVKVAADGAPYL 136
            +K A             V+GWPPVRSY RK + + C+          +VKV+ DGAPYL
Sbjct: 66  KEKSACPKDPAKPPAKAQVVGWPPVRSY-RKNVMVSCQKSSGGPEAAAFVKVSMDGAPYL 125

Query: 137 RKLDLEMFNGYQDLFIAFEELFTSFPI-----------------------------CY-- 169
           RK+DL M+  Y +L  A   +F+SF +                              Y  
Sbjct: 126 RKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYED 185

[Close]

BLAST of Carg09875 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 126.7 bits (317), Expect = 1.8e-29
Identity = 83/223 (37.22%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 18  ISFDETELTLGLPG--------NKVNAKRGFHNTVDAGVGSSTSEPRDGRNEPELVSSGD 77
           I+F+ TEL LGLPG         K N KRGF  TVD  +  S S   D  ++ +L +  +
Sbjct: 2   INFEATELRLGLPGGNHGGEMAGKNNGKRGFSETVDLKLNLS-STAMDSVSKVDLENMKE 61

Query: 78  -----GQKRAVMGWPPVRSYRRKTIE-----------------------------MRCKY 137
                  K  V+GWPPVRS+R+  +                                  Y
Sbjct: 62  KVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAY 121

Query: 138 VKVAADGAPYLRKLDLEMFNGYQDLFIAFEELFTSFPI---------------------- 169
           VKV+ DGAPYLRK+DL+++  YQDL  A  ++F+SF I                      
Sbjct: 122 VKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLN 181

[Close]

BLAST of Carg09875 vs. TAIR 10
Match: AT3G15540.1 (indole-3-acetic acid inducible 19 )

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-28
Identity = 74/182 (40.66%), Postives = 95/182 (52.20%), Query Frame = 0


Query: 18  ISFDETELTLGLPG----NKVNAKRGFHNTVDAGVGSSTSEPRDG----RNEPELVSSGD 77
           +  + TEL LGLPG     K+  KR F        GS++ +   G      + E V+   
Sbjct: 6   LGLEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEKVNDSP 65

Query: 78  GQKRAVMGWPPVRSYRRK-------TIEMRCKYVKVAADGAPYLRKLDLEMFNGYQDLFI 137
             K  V+GWPPV SYR+K       T ++   YVKV+ DG PYLRK+DL    GY DL  
Sbjct: 66  AAKSQVVGWPPVCSYRKKNSCKEASTTKVGLGYVKVSMDGVPYLRKMDLGSSQGYDDLAF 125

Query: 138 AFEELF--------------TSFPICY--KDGDWMLVGDVPWKLFIESCKRIRLMKGSDT 169
           A ++LF                +   Y  KDGDWML GDVPW +F+ESCKR+R+MK SD 
Sbjct: 126 ALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDA 185

[Close]

BLAST of Carg09875 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 122.9 bits (307), Expect = 2.6e-28
Identity = 72/180 (40.00%), Postives = 97/180 (53.89%), Query Frame = 0


Query: 18  ISFDETELTLGLPGNKVNAKRGFHNTVDAGVGSSTSEPRDGRNEPELVSSGDGQ-----K 77
           ++   TEL LGLPG +         TV  G  +    P     E E+ S+G  +     K
Sbjct: 11  VNLKATELRLGLPGTE--------ETVSCGKSNKRVLPE--ATEKEIESTGKTETASPPK 70

Query: 78  RAVMGWPPVRSYRRKTI-------EMRCKYVKVAADGAPYLRKLDLEMFNGYQDLFIAFE 137
             ++GWPPVRSYR+  +       E +  YVKV+ DGAPYLRK+DL M+  Y +L  + E
Sbjct: 71  AQIVGWPPVRSYRKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLE 130

Query: 138 ELF---------------TSFPICY--KDGDWMLVGDVPWKLFIESCKRIRLMKGSDTIG 169
            +F               + F   Y  KDGDWMLVGDVPW++F+ SCKR+R+MKGS+  G
Sbjct: 131 NMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKG 180

[Close]

BLAST of Carg09875 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 72/181 (39.78%), Postives = 100/181 (55.25%), Query Frame = 0


Query: 18  ISFDETELTLGLPG--NKVNAKRGFH--NTVDAGVGSSTSEPRDGRNEPELVSSGDGQKR 77
           ++  ETEL LGLPG  N   AK      N  +  V S+ +E ++  +      +   +K 
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTE-KEIESSSRKTETSPPRKA 64

Query: 78  AVMGWPPVRSYRRKTIEMRCK---------YVKVAADGAPYLRKLDLEMFNGYQDLFIAF 137
            ++GWPPVRSYR+  I+ +           YVKV+ DGAPYLRK+DL  + GY +L  A 
Sbjct: 65  QIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKAL 124

Query: 138 EELF---------------TSFPICY--KDGDWMLVGDVPWKLFIESCKRIRLMKGSDTI 169
           E +F               + F   Y  KDGDWML+GDVPW++FI +CKR+R+MKGS+  
Sbjct: 125 EVMFKFSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAK 184

The following BLAST results are available for this feature:

BLAST of Carg09875 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023561.1	3.0e-95	100.00	Auxin-responsive protein IAA11 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589890.1	1.0e-87	85.35	Auxin-responsive protein IAA11, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516646.1	5.7e-86	83.33	auxin-responsive protein IAA11-like [Cucurbita pepo subsp. pepo]	[more]
XP_022961044.1	5.7e-86	83.33	auxin-responsive protein IAA11-like [Cucurbita moschata]	[more]
XP_022987877.1	2.2e-85	83.33	auxin-responsive protein IAA11-like [Cucurbita maxima]	[more]

BLAST of Carg09875 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q75GK0	1.9e-31	37.39	Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA11...	[more]
P93830	6.7e-29	38.50	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=...	[more]
P13088	1.1e-28	43.82	Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1	[more]
O24541	1.5e-28	42.70	Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 S...	[more]
O24407	2.5e-28	37.22	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=...	[more]

BLAST of Carg09875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCV0	2.8e-86	83.33	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111461669 PE=3 SV=1	[more]
A0A6J1JBK2	1.1e-85	83.33	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111485284 PE=3 SV=1	[more]
A0A5D3BM61	1.3e-62	65.26	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7TIX8	2.1e-62	65.26	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3CKL8	2.1e-62	65.26	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103501531 PE=3 SV=1	[more]

BLAST of Carg09875 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04250.1	4.7e-30	38.50	AUX/IAA transcriptional regulator family protein	[more]
AT3G04730.1	1.8e-29	37.22	indoleacetic acid-induced protein 16	[more]
AT3G15540.1	1.5e-28	40.66	indole-3-acetic acid inducible 19	[more]
AT5G43700.1	2.6e-28	40.00	AUX/IAA transcriptional regulator family protein	[more]
AT1G04240.1	1.3e-27	39.78	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 92..133 e-value: 9.4E-12 score: 45.3 coord: 136..168 e-value: 5.4E-17 score: 62.5 coord: 21..90 e-value: 4.2E-7 score: 30.1
None	No IPR available	GENE3D	3.10.20.90		coord: 133..173 e-value: 2.9E-12 score: 48.4 coord: 88..132 e-value: 5.2E-10 score: 41.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31734:SF34	AUXIN-RESPONSIVE PROTEIN IAA15	coord: 5..134
None	No IPR available	PANTHER	PTHR31734:SF34	AUXIN-RESPONSIVE PROTEIN IAA15	coord: 136..167
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 94..162
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 5..134
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 136..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09875-RA	Carg09875-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus