Carg09841 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09841
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RanBP2-type domain-containing protein
Location	Carg_Chr10: 2944596 .. 2949607 (-)
RNA-Seq Expression	Carg09841
Synteny	Carg09841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCCAGGGGTAAAGACTCTACGACTCACCATCAGCCGTTATTGAGCAGTCTTGTTGTCCGGCCTTCAAATAGTGACGGGGGTGGTGGTGGAGTCGGTGGAACCAGTGGCGGCCGCGTTGGTCGTGGAAGCGATTATGAGGCGGGTGAGGTTCCCCGTGACCCTCCACAATATTCTCGATTGGATCGATATTCAGATGATTTGGGTTCGTTATTATTCTACCGTACACCTTTGTTTTTGCTCGGTTTTCGAGCTATGATTGAATGAGTAGTTTCTGTGCTTAAATGTTTTTTTTTTTTTTTCCCTTCTAAAAAAATTGTCACCGTGTTGAAGTTAATTGCTTGGCGACTTTAGGTAGGATTTTTATGCATTATTTGGTGGAAAACTTATTTTCAATGACAGAAAGTAAATTACAATCCAATCCGAGTCAATGGAGATTATTAGATTGTTCATCGCGGCTAAAAGACGACTTAAAGCTTTAAAGGGAAAGTGATGTTTACTCCAAGATAATGTAGTCAGTCACTATTGATTCAACAAAGCTATCCAAACCCTTACCTTTTGCAGTTAGAGGTTCGCATGGTCCTTTCTAGCCTAAGTTTTCAATAAGACGCTCCATTGATTCATAGCCACAGAATCACCTTCTCTTTTATGGAAGGATGGTCGCTGAGTCTTGATACCTTCAGAATTTATATGATATATCAATGTGCTCTCTCAGAAGTTGATGTAAAGATTACAGATACATAAATGTGTATATAACTTGTAAATTTATGTCACTACATGGTTACAAGTTCCTTCCATTAGGTTCCTTGTCTCAAAATTATAGGCGTCCTTGTAAATTTTGTTTCAGCTAAATTCCAGTTTGCGAGTTCTGTTTCAATTGTGGAGGGATAATTTAGTTAACCGAAGTATGTTGTAGTTTCATGGGAGATGGAACCCTTAGATATGCTTCGAAAGAAAATAAAGAAAACCATCCTGGCTCTCTTTTCCTGGATGGATAATTGAAGAAATCTTCTCTATACTCTTGTTGGTCTTTTCTCATATTTTTTAGTTAGACCTTATCAAAGAGCTTTGCCAAGATAATTGCAGTTTGACTCATCTGTATTATTATTATTCTCCCTGGTCCTTCTTGCTGCCTTACCACAGAGAACTTATGCCCCCCCCCCCCACGCCCCCCCGGATATGAATGCATGCATTTATAGACAAATATCCATCTGCCGTTGGTAAGAGAGGATGATTTTTTTTATGTCTTTCACCTAGAGGAATGCTATCTAAGATTTTTACTCAAAATGGTGGATTATTGGAATTAATGGGTTTCACCGTTGATTCCGACCAATTTATGACGGCGTTTGGTGAGTTCAATAATCATGCATTATGTATACCCTGCCATTAGAGACACAGTCGAGGGCCAATTCCACAGGCCAGATTTTCATTTTCTTTTTTTTGAAACTTGTTGGAGAGGATGTATTGGTTATTTGCAGAAGATATTTGAGTATTTTTCCTAGATCTCTAGCAAACTTTTTTATAAGCTTATATTCTTATCTCGTGCAAACTTAGTTTAATTTATTAGAAAATATCGAAGTGTGTATGTAATTTGACGTTTTCTTTTGATTCATCAAATACTAGGATAGGATGCATTGATAACTAGGGTTTTGCAAATCCGTTTTTGGTTATCACTTTGATCTTATAGAAAATGTTGTGATGTTCCGGTGACAAATGAATTCCGTGGCCTCTTTGTTTCTTTTATTTTATCCCCATTTTCTTTTGCATATCGAGAATGTCAATCTACTTCCGCATGTCAAACTTTTTTTCTGGGAATAAAATTTTCTATTCTCTTACAGCTTTGTGTTGCCGCCTGCAAGAACTTAGATCTTGAGGAGGGCTTTGGGTAAGTGCAGTCTCAGTTCACGATCCTGGGAATTGCTCTTTTTTCCATGTTAAGACAATTTAATTTTGGGGTTAAAATTTGTGCAAGAAATTCTGGGTTGCTGAGTGGAGAGCTATCAATTCAACCGTTGTCATTTTGGGATATTTATGGTATTGGGCTTGGTTGGAGTAAGATATGTTTGAATACTGATCATAATCAAATCATGGTGAGGTGAGGGTTTTCTCTTGAGAAATTGAAGGCGATCAAATAACAAGCTAAAGAAGTGTTGTTGGCCTGCCTGGTTGAGACTTTTGGTATGAGCTCTAAATGAACTTAATGGTGCTTGACTTTGGCTCTCTGCAAGAAATGAACTTAAAGGTGGACTTTTTCACTGTCTATATTTCCATCCAAGGGGTGAGGTTATTCTCATGGAACAGACATTGATTGGGTTGTATTGGTTGATTAAGGGCCATCTGGGTTATGTATAGCAATTCTTGATCTATTTTTCAGATTCATTAAGGGTTGATTTGCAGGAAAACTTGGGATCTTCATATTTCATTTTGTACCCCATCCTACAATTAGGGCTTTGTTTTAATTAAGTATTTGGTAGTGTGAATTGGTATAGCAATGGCAGCCCAGTGGCCTACAATTGAATTAACTGCATTCCTCTCATCCTTTCAACTCTTACAAATCATGGTCAATGATTGAAGGTATCATTGGTCATTTCAACAGGATGTGGCTAGCCAACTAGACTCTACGGAAAATTGTTCTTGCAGTATGCATGGAAATCCATCGGTATGATTTGGAAAGCAGTAACGAACTTTTGTGACCATGCAAGTAAGATTTGGAGTTGACTTCTTAAATAACAGAGGAGTAGGGTGGGTGCCATTGCTCAATCTGGATTTTGGATACTTTAATTTATGTGGGTTTTTTTATGACGGTTTGTTTCCTGTAAGCTTTTTGCTTTGGTCTTACTGATCCTCCCAGGTGTCATTCAACTGAAGAATTTTGTGTATTGGCATGGGTTGATTGTTCCTTTGTGATTGACTCTAGCTTGTATGTGTTGTTCATTTAAGATTGGGCTATTGGTGGACGTCCTTTCTCATTGCCAGGACATCGGTGCACTGAGTTTTTGCTTCTTCAAGACATGGTTTTGGGCGCATTGCTGGGTTTGTGGAAAATTGGAAATAGAATCTTTCTAGGCTATGGTGGTTCAAATTATAGATGGATGTGGGTTTTACATGTACTAACGCTGGACGTGTGTTCATTGCAAGTAGCCATGGTTTTGCTATCTTTTTGCTTCTGTTAAAATTTCGCATGATGTGGGTGGTGGTAACATATGGAACCTGCACAGGCAGTTAACATCAGAACTTTCTCTCTTCTCTGCATCTTTGCACATTCTTTTGCTCTGTTCTCAGAGAGGAGATGCCAACATTGAATGGCAATGGTTGTCAATTTTTTTGGTTGGTCCTTTTGCAGTTGTATCAGAGAAAATCTTTGGAGATATATGGTTGTTGTACTTCGAGTAGTTTTCCTATGCAACATGTTACTTTTCTTAATATCTTATGAACCCACTCCCTTTTTTATTTCAGGATATAGAATGCATGCAGGTTCAGTTTCTCCCACACGTCGTCGGGATGATCATAGATATATTTCTGATTTTGATCATTCTAGTGGTCTCACACGGGGCCGTGAATTTGGTGGTGGGAGGGATCTTGGTAGGTATCGAGATACTTCGCCTCATTACAGTCGAAGAGTAAGTGGTGGCAGGCCATTTGGGAGAGGTTTCGATGGCCCTGGACATGCTCCTGGGCCATTTAGAGGGGAACGTAGTAAAAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTGTAAGTACTAATCTAGCACCACAATTTGATATATATATATATAGCAATGGATTTACTTCTGTTTTGTACAGATAAACCTTAGCTGATAACCATGCCATTACACCTTTTAGATATATTAATTAGAAATTTAACCGTTGCATGGAATAGGATCCTTTCTATTGATGTATTTTGGTTGGTTTAATTCTTTTTTTTTTTTTTTTTTTTTCACGTCGTGGATTCTATATCATTTGTTTATTTTGTTTTTATTTTTTAAACGTAACTCTGAGGTTGTTTTTCCTATAAGAATTCTGTCATGCATATTACTTTTATGGATTTAAAAAAGAGAGCATATTTCTTTTATGGATTTAAAAAAGAGAGCATATTTCTTTTATGGATTTGGCTGTAGTGGTTGTATCGAATGAAACATGATTCATCAGAGAAGCTCGAATGTGTGTGCCAATCTTTTATTTTAATGCATAGCTTACTGTACATTCTTACATTACATTGCTTCATGGTGCTATTCTTTTCTCAAACCAGTTTATTCTTATTCTTCATTAGATGTGACAACTTAAACTTTGCAAGACGAGAATTTTGTAACAACTGCAACAGACCCCGCACTGGAGCTGGTGGAAGTCCTCGAAGAGGAGGCTATGTTGGCCCACCATCCCTGCATTCTCCTCCTAGACGCTTTGCTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTGTTAATGAATATAGGTCACCTCCCCGTGGTTGGGCCAGGGATGGTCCTAGGGAGATTGCAGCTGGTGGTCTGGCACCTCCGAGGTATGAAAGCAGGTATTCCGATCATCACCTGCGGAGAGATAGGGTTGATTATCTAGAAGACAGCTTCAGAGGAAGATCCAAGTTCGATAGGCTACCTCCTTCAGATTGGTCCCTTAGAGACAATGGAAGGGATGACTTCATCAACGAGAGGAAGGGATTTGAAAGAAGGCCACTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCACCACCACTGTCATTGCTTCCTCAGCGTGGGCGATGGGCTCGCGACGTTAGAGAAAGGAGCCGTTCCCCAATCAGAGGTCCAGTCAGATCACCATTGAGAGTCCCTCTTCGGTCTCCATTAAGCGGTGGCCTTCCACCAAAAGACTATCGCAGAGATGTTTTTGTTGAAAGGGAGCGTGACGACAGGCGTGGCCTAGGACGAGATCGCGATGGAGGCCCATTTTAG

mRNA sequence

ATGGGTTCCAGGGGTAAAGACTCTACGACTCACCATCAGCCGTTATTGAGCAGTCTTGTTGTCCGGCCTTCAAATAGTGACGGGGGTGGTGGTGGAGTCGGTGGAACCAGTGGCGGCCGCGTTGGTCGTGGAAGCGATTATGAGGCGGGTGAGCTTTGTGTTGCCGCCTGCAAGAACTTAGATCTTGAGGAGGGCTTTGGTTGTATCAGAGAAAATCTTTGGAGATATATGGTTGTTGTACTTCGAGTAGTTTTCCTATGCAACATGTTACTTTTCTTAATATCTTATGAACCCACTCCCTTTTTTATTTCAGGATATAGAATGCATGCAGGTTCAGTTTCTCCCACACGTCGTCGGGATGATCATAGATATATTTCTGATTTTGATCATTCTAGTGGTCTCACACGGGGCCGTGAATTTGGTGGTGGGAGGGATCTTGGTAGGTATCGAGATACTTCGCCTCATTACAGTCGAAGAGTAAGTGGTGGCAGGCCATTTGGGAGAGGTTTCGATGGCCCTGGACATGCTCCTGGGCCATTTAGAGGGGAACGTAGTAAAAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTATGTGACAACTTAAACTTTGCAAGACGAGAATTTTGTAACAACTGCAACAGACCCCGCACTGGAGCTGGTGGAAGTCCTCGAAGAGGAGGCTATGTTGGCCCACCATCCCTGCATTCTCCTCCTAGACGCTTTGCTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTGTTAATGAATATAGGTCACCTCCCCGTGGTTGGGCCAGGGATGGTCCTAGGGAGATTGCAGCTGGTGGTCTGGCACCTCCGAGGTATGAAAGCAGGTATTCCGATCATCACCTGCGGAGAGATAGGGTTGATTATCTAGAAGACAGCTTCAGAGGAAGATCCAAGTTCGATAGGCTACCTCCTTCAGATTGGTCCCTTAGAGACAATGGAAGGGATGACTTCATCAACGAGAGGAAGGGATTTGAAAGAAGGCCACTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCACCACCACTGTCATTGCTTCCTCAGCGTGGGCGATGGGCTCGCGACGTTAGAGAAAGGAGCCGTTCCCCAATCAGAGGTCCAGTCAGATCACCATTGAGAGTCCCTCTTCGGTCTCCATTAAGCGGTGGCCTTCCACCAAAAGACTATCGCAGAGATGTTTTTGTTGAAAGGGAGCGTGACGACAGGCGTGGCCTAGGACGAGATCGCGATGGAGGCCCATTTTAG

Coding sequence (CDS)

ATGGGTTCCAGGGGTAAAGACTCTACGACTCACCATCAGCCGTTATTGAGCAGTCTTGTTGTCCGGCCTTCAAATAGTGACGGGGGTGGTGGTGGAGTCGGTGGAACCAGTGGCGGCCGCGTTGGTCGTGGAAGCGATTATGAGGCGGGTGAGCTTTGTGTTGCCGCCTGCAAGAACTTAGATCTTGAGGAGGGCTTTGGTTGTATCAGAGAAAATCTTTGGAGATATATGGTTGTTGTACTTCGAGTAGTTTTCCTATGCAACATGTTACTTTTCTTAATATCTTATGAACCCACTCCCTTTTTTATTTCAGGATATAGAATGCATGCAGGTTCAGTTTCTCCCACACGTCGTCGGGATGATCATAGATATATTTCTGATTTTGATCATTCTAGTGGTCTCACACGGGGCCGTGAATTTGGTGGTGGGAGGGATCTTGGTAGGTATCGAGATACTTCGCCTCATTACAGTCGAAGAGTAAGTGGTGGCAGGCCATTTGGGAGAGGTTTCGATGGCCCTGGACATGCTCCTGGGCCATTTAGAGGGGAACGTAGTAAAAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTATGTGACAACTTAAACTTTGCAAGACGAGAATTTTGTAACAACTGCAACAGACCCCGCACTGGAGCTGGTGGAAGTCCTCGAAGAGGAGGCTATGTTGGCCCACCATCCCTGCATTCTCCTCCTAGACGCTTTGCTGCCCACCCAATTGAACGTTCTCCTGGCAGGACTGTTAATGAATATAGGTCACCTCCCCGTGGTTGGGCCAGGGATGGTCCTAGGGAGATTGCAGCTGGTGGTCTGGCACCTCCGAGGTATGAAAGCAGGTATTCCGATCATCACCTGCGGAGAGATAGGGTTGATTATCTAGAAGACAGCTTCAGAGGAAGATCCAAGTTCGATAGGCTACCTCCTTCAGATTGGTCCCTTAGAGACAATGGAAGGGATGACTTCATCAACGAGAGGAAGGGATTTGAAAGAAGGCCACTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCAAAGGGATTTGAAAGAAGGCCGCTATCACCACCACCACTGTCATTGCTTCCTCAGCGTGGGCGATGGGCTCGCGACGTTAGAGAAAGGAGCCGTTCCCCAATCAGAGGTCCAGTCAGATCACCATTGAGAGTCCCTCTTCGGTCTCCATTAAGCGGTGGCCTTCCACCAAAAGACTATCGCAGAGATGTTTTTGTTGAAAGGGAGCGTGACGACAGGCGTGGCCTAGGACGAGATCGCGATGGAGGCCCATTTTAG

Protein sequence

MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNLDLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRDVFVERERDDRRGLGRDRDGGPF

Homology

[Close]

BLAST of Carg09841 vs. NCBI nr
Match: KAG7023595.1 (hypothetical protein SDJN02_14621, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 914.8 bits (2363), Expect = 2.8e-262
Identity = 442/442 (100.00%), Postives = 442/442 (100.00%), Query Frame = 0


Query: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
           DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD
Sbjct: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360
           DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG
Sbjct: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360

Query: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 420
           FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD
Sbjct: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 420

Query: 421 VFVERERDDRRGLGRDRDGGPF 443
           VFVERERDDRRGLGRDRDGGPF
Sbjct: 421 VFVERERDDRRGLGRDRDGGPF 442

[Close]

BLAST of Carg09841 vs. NCBI nr
Match: XP_022961315.1 (uncharacterized protein LOC111461847 isoform X2 [Cucurbita moschata])

HSP 1 Score: 783.9 bits (2023), Expect = 7.4e-223
Identity = 392/442 (88.69%), Postives = 396/442 (89.59%), Query Frame = 0


Query: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGE+     +  
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
            L+           RY   +                        GYRMHAGSVSPTRRRD
Sbjct: 61  RLD-----------RYSDDL------------------------GYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360
           DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG
Sbjct: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360

Query: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 420
           FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD
Sbjct: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 407

Query: 421 VFVERERDDRRGLGRDRDGGPF 443
           VFVERERDDRRGLGRDRDGGPF
Sbjct: 421 VFVERERDDRRGLGRDRDGGPF 407

[Close]

BLAST of Carg09841 vs. NCBI nr
Match: XP_022961316.1 (uncharacterized protein LOC111461847 isoform X3 [Cucurbita moschata])

HSP 1 Score: 781.6 bits (2017), Expect = 3.7e-222
Identity = 391/442 (88.46%), Postives = 395/442 (89.37%), Query Frame = 0


Query: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGE+     +  
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
            L+           RY   +                        GYRMHAGSVSPTRRRD
Sbjct: 61  RLD-----------RYSDDL------------------------GYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360
           DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRP SPKG
Sbjct: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPQSPKG 360

Query: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 420
           FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD
Sbjct: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 407

Query: 421 VFVERERDDRRGLGRDRDGGPF 443
           VFVERERDDRRGLGRDRDGGPF
Sbjct: 421 VFVERERDDRRGLGRDRDGGPF 407

[Close]

BLAST of Carg09841 vs. NCBI nr
Match: KAG6589926.1 (Zinc finger Ran-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 780.8 bits (2015), Expect = 6.3e-222
Identity = 391/442 (88.46%), Postives = 395/442 (89.37%), Query Frame = 0


Query: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGE+     +  
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
            L+           RY   +                        GYRMHAGSVSPTRRRD
Sbjct: 61  RLD-----------RYSDDL------------------------GYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGP S
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPQS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360
           DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG
Sbjct: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360

Query: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 420
           FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD
Sbjct: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 407

Query: 421 VFVERERDDRRGLGRDRDGGPF 443
           VFVERERDDRRGLGRDRDGGPF
Sbjct: 421 VFVERERDDRRGLGRDRDGGPF 407

[Close]

BLAST of Carg09841 vs. NCBI nr
Match: XP_023515884.1 (uncharacterized protein LOC111779923 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 778.1 bits (2008), Expect = 4.1e-221
Identity = 389/442 (88.01%), Postives = 395/442 (89.37%), Query Frame = 0


Query: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGE+     +  
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
            L+           RY   +                        GYRMHAGSVSPTRRRD
Sbjct: 61  RLD-----------RYSDDL------------------------GYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRT+NE RSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTLNECRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360
           DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG
Sbjct: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360

Query: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 420
           FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD
Sbjct: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 407

Query: 421 VFVERERDDRRGLGRDRDGGPF 443
           V+VERERDDRRGLGRDRDGGPF
Sbjct: 421 VYVERERDDRRGLGRDRDGGPF 407

[Close]

BLAST of Carg09841 vs. ExPASy Swiss-Prot
Match: Q92804 (TATA-binding protein-associated factor 2N OS=Homo sapiens OX=9606 GN=TAF15 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.2e-07
Identity = 37/105 (35.24%), Postives = 45/105 (42.86%), Query Frame = 0


Query: 137 GREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDG 196
           G+EF G      +    P + R        G G  G     G +RG          P+ G
Sbjct: 305 GKEFHGNIIKVSFATRRPEFMR--------GGGSGGGRRGRGGYRGRGGFQGRGGDPKSG 364

Query: 197 DWYCSDPLCDNLNFARREFCNNCNRPR----TGAGGSPRRGGYVG 238
           DW C +P C N+NFARR  CN CN PR      +GG  R  GY G
Sbjct: 365 DWVCPNPSCGNMNFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGG 401

[Close]

BLAST of Carg09841 vs. ExPASy Swiss-Prot
Match: Q28009 (RNA-binding protein FUS OS=Bos taurus OX=9913 GN=FUS PE=2 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 5.3e-06
Identity = 54/176 (30.68%), Postives = 72/176 (40.91%), Query Frame = 0


Query: 137 GREFGGGRDLGRYRDTSPHYSRRVSGGR-------PFGRGFDGPGHAPGPFRG--ERSKN 196
           G+EF G      +      ++R    GR       P GRG  G G + G  RG       
Sbjct: 343 GKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGG 402

Query: 197 NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPR-TGAGGSPRRGGYVGPPSLHSPPR 256
               + R GDW C +P C+N+NF+ R  CN C  P+  G GG P  G ++G    +   R
Sbjct: 403 GGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGP-GGSHMG--GNYGDDR 462

Query: 257 RFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDR 303
           R      +R   R     R   RG  R G      GG  P + +SR      RR+R
Sbjct: 463 RGGRGGYDRGGYRG----RGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRER 511

[Close]

BLAST of Carg09841 vs. ExPASy Swiss-Prot
Match: P35637 (RNA-binding protein FUS OS=Homo sapiens OX=9606 GN=FUS PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.3e-06
Identity = 54/176 (30.68%), Postives = 72/176 (40.91%), Query Frame = 0


Query: 137 GREFGGGRDLGRYRDTSPHYSRRVSGGR-------PFGRGFDGPGHAPGPFRG--ERSKN 196
           G+EF G      +      ++R    GR       P GRG  G G + G  RG       
Sbjct: 356 GKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGG 415

Query: 197 NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPR-TGAGGSPRRGGYVGPPSLHSPPR 256
               + R GDW C +P C+N+NF+ R  CN C  P+  G GG P  G ++G    +   R
Sbjct: 416 GGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGP-GGSHMG--GNYGDDR 475

Query: 257 RFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDR 303
           R      +R   R     R   RG  R G      GG  P + +SR      RR+R
Sbjct: 476 RGGRGGYDRGGYRG----RGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRER 524

[Close]

BLAST of Carg09841 vs. ExPASy Swiss-Prot
Match: P56959 (RNA-binding protein FUS OS=Mus musculus OX=10090 GN=Fus PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 7.7e-05
Identity = 54/176 (30.68%), Postives = 72/176 (40.91%), Query Frame = 0


Query: 137 GREFGGGRDLGRYRDTSPHYSRRVSGGR-------PFGRGFDGPGHAPGPFRG--ERSKN 196
           G+EF G      +      ++R    GR       P GRG  G G + G  RG       
Sbjct: 349 GKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGG 408

Query: 197 NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPR-TGAGGSPRRGGYVGPPSLHSPPR 256
               + R GDW C +P C+N+NF+ R  CN C  P+  G GG P  G ++G    +   R
Sbjct: 409 GGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGP-GGSHMG--GNYGDDR 468

Query: 257 RFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDR 303
           R      +R   R     R   RG  R G      GG  P + +SR      RR+R
Sbjct: 469 R-GRGGYDRGGYRG----RGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHRQDRRER 516

[Close]

BLAST of Carg09841 vs. ExPASy Swiss-Prot
Match: Q01844 (RNA-binding protein EWS OS=Homo sapiens OX=9606 GN=EWSR1 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.3e-04
Identity = 36/85 (42.35%), Postives = 40/85 (47.06%), Query Frame = 0


Query: 163 GRPFGRGFDGPGHAPGPFRGERSKNNP----NVRPRDGDWYCSDPLCDNLNFARREFCNN 222
           GR  GRG D  G  P   RG  S+ NP    NV+ R GDW C +P C N NFA R  CN 
Sbjct: 485 GRMGGRGGDRGGFPPRGPRG--SRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQ 544

Query: 223 CNRPRTGA---------GGSPRRGG 235
           C  P+            GG   RGG
Sbjct: 545 CKAPKPEGFLPPPFPPPGGDRGRGG 567

[Close]

BLAST of Carg09841 vs. ExPASy TrEMBL
Match: A0A6J1HBT6 (uncharacterized protein LOC111461847 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461847 PE=4 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 3.6e-223
Identity = 392/442 (88.69%), Postives = 396/442 (89.59%), Query Frame = 0


Query: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGE+     +  
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
            L+           RY   +                        GYRMHAGSVSPTRRRD
Sbjct: 61  RLD-----------RYSDDL------------------------GYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360
           DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG
Sbjct: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360

Query: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 420
           FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD
Sbjct: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 407

Query: 421 VFVERERDDRRGLGRDRDGGPF 443
           VFVERERDDRRGLGRDRDGGPF
Sbjct: 421 VFVERERDDRRGLGRDRDGGPF 407

[Close]

BLAST of Carg09841 vs. ExPASy TrEMBL
Match: A0A6J1HA13 (uncharacterized protein LOC111461847 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461847 PE=4 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.8e-222
Identity = 391/442 (88.46%), Postives = 395/442 (89.37%), Query Frame = 0


Query: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGE+     +  
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
            L+           RY   +                        GYRMHAGSVSPTRRRD
Sbjct: 61  RLD-----------RYSDDL------------------------GYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360
           DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRP SPKG
Sbjct: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPQSPKG 360

Query: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 420
           FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD
Sbjct: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 407

Query: 421 VFVERERDDRRGLGRDRDGGPF 443
           VFVERERDDRRGLGRDRDGGPF
Sbjct: 421 VFVERERDDRRGLGRDRDGGPF 407

[Close]

BLAST of Carg09841 vs. ExPASy TrEMBL
Match: A0A6J1HDP1 (uncharacterized protein LOC111461847 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461847 PE=4 SV=1)

HSP 1 Score: 775.8 bits (2002), Expect = 9.8e-221
Identity = 392/452 (86.73%), Postives = 396/452 (87.61%), Query Frame = 0


Query: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGE+     +  
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
            L+           RY   +                        GYRMHAGSVSPTRRRD
Sbjct: 61  RLD-----------RYSDDL------------------------GYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPL---- 360
           DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPL    
Sbjct: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360

Query: 361 ------SPKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSG 420
                 SPKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSG
Sbjct: 361 FERRPQSPKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSG 417

Query: 421 GLPPKDYRRDVFVERERDDRRGLGRDRDGGPF 443
           GLPPKDYRRDVFVERERDDRRGLGRDRDGGPF
Sbjct: 421 GLPPKDYRRDVFVERERDDRRGLGRDRDGGPF 417

[Close]

BLAST of Carg09841 vs. ExPASy TrEMBL
Match: A0A6J1HBF9 (uncharacterized protein LOC111461847 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111461847 PE=4 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 2.8e-220
Identity = 375/385 (97.40%), Postives = 375/385 (97.40%), Query Frame = 0


Query: 68  CIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISD 127
           CIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISD
Sbjct: 15  CIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRDDHRYISD 74

Query: 128 FDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKN 187
           FDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKN
Sbjct: 75  FDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKN 134

Query: 188 NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRR 247
           NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRR
Sbjct: 135 NPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPSLHSPPRR 194

Query: 248 FAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLE 307
           FAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLE
Sbjct: 195 FAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRRDRVDYLE 254

Query: 308 DSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPL----------S 367
           DSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPL          S
Sbjct: 255 DSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKGFERRPQS 314

Query: 368 PKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDY 427
           PKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDY
Sbjct: 315 PKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDY 374

Query: 428 RRDVFVERERDDRRGLGRDRDGGPF 443
           RRDVFVERERDDRRGLGRDRDGGPF
Sbjct: 375 RRDVFVERERDDRRGLGRDRDGGPF 399

[Close]

BLAST of Carg09841 vs. ExPASy TrEMBL
Match: A0A6J1JJQ1 (uncharacterized protein LOC111485202 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485202 PE=4 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 3.7e-220
Identity = 387/442 (87.56%), Postives = 394/442 (89.14%), Query Frame = 0


Query: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELCVAACKNL 60
           MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGV GTSGGRVGRGSDYEAGE+     +  
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVCGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  DLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTRRRD 120
            L+           RY   +                        GYRMHAGSVSPTRRRD
Sbjct: 61  RLD-----------RYSDDL------------------------GYRMHAGSVSPTRRRD 120

Query: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180
           DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF
Sbjct: 121 DHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPF 180

Query: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240
           RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS
Sbjct: 181 RGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGGYVGPPS 240

Query: 241 LHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300
           LHSPPRRFAAHPIERSPGRT+NEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR
Sbjct: 241 LHSPPRRFAAHPIERSPGRTLNEYRSPPRGWARDGPREIAAGGLAPPRYESRYSDHHLRR 300

Query: 301 DRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360
           DRVDY+EDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG
Sbjct: 301 DRVDYVEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFERRPLSPKG 360

Query: 361 FERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 420
           FERRPLSPP LSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD
Sbjct: 361 FERRPLSPPQLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPKDYRRD 407

Query: 421 VFVERERDDRRGLGRDRDGGPF 443
           V+VERERDDRRGLGRDRDGGPF
Sbjct: 421 VYVERERDDRRGLGRDRDGGPF 407

[Close]

BLAST of Carg09841 vs. TAIR 10
Match: AT4G28990.2 (RNA-binding protein-related )

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-46
Identity = 171/461 (37.09%), Postives = 216/461 (46.85%), Query Frame = 0


Query: 1   MGSRGKDSTT-HHQPLLSSLVVRPSNS---DGGGGGVGGTSGGRVGRG-SDYEAGELCVA 60
           MGS  K+ TT HH P +SSLVVRPS S   + G    G    G V R    +   +    
Sbjct: 1   MGSTEKEQTTQHHPPHISSLVVRPSGSNDREDGRNAAGDYEPGEVSRDRPSFNRSDRYKG 60

Query: 61  ACKNLDLEEGFGCIRENLWRYMVV------VLRVVFLCNMLLFLISYEPTPFFISGYRMH 120
               L     F  ++  +  Y++V      ++ +  LC + + ++          G+R  
Sbjct: 61  DNGELSRHHLFLSLQMLVIVYVLVNVFDNALITITMLCKLQMSIV----LALKYLGHRTR 120

Query: 121 AGSVSPTRR-RDDHRYISDFDHSSGLTRGREFGGGRDL-GRYRDTSPHYSRRVSGGRPFG 180
           A S SP RR  +DH++ SD +HS    RGRE    R+  GR+RD SP  +R  +G RP+ 
Sbjct: 121 ASSSSPGRRGYEDHKHGSDLNHSGVPPRGRELSSRREAPGRHRDYSPPLARGGAGARPYR 180

Query: 181 RGFDGPGHAPGPFRGERSKNN-PNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGA 240
           RG DGP   P   R   S+NN   V+PR+GDWYC DPLC NLNFARRE C  C R R   
Sbjct: 181 RGLDGP--EPPHGRDGMSRNNISKVQPREGDWYCLDPLCRNLNFARRESCYKCKRHRYAP 240

Query: 241 GGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAP 300
             SP     + PP  HSP R F             N YRSPPRGW RD P         P
Sbjct: 241 ANSPPLPRLLPPPMNHSPRRDF-------------NGYRSPPRGWPRDYP---------P 300

Query: 301 PRYE-SRYSDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRP 360
           PR++   + D    RDR  Y +  +       R   SDW+                   P
Sbjct: 301 PRHDHPTWRDR--ERDRPHYSDHEYPP----SRRIASDWA----------------HTEP 360

Query: 361 LSPKGFERRPLSPKGFERRPLSPPPLSLLPQRGRWARDVRERSRS-PIRGPVRSPLRVPL 420
           L    ++RRP         PLSP      P+ GRW R +RERSRS P+R     PLR   
Sbjct: 361 LPKPHYDRRP---------PLSP------PRGGRWGRVLRERSRSPPLRDVPPPPLRDGP 395

Query: 421 RSPLSGGLPP--KDYRRDVFVERE-RDDRRGLGRDRDGGPF 443
              L GG PP  +DYRRD   +RE RDD RG GR R G  +
Sbjct: 421 PPSLRGGGPPLHRDYRRDSHFDRERRDDGRG-GRGRMGNSY 395

[Close]

BLAST of Carg09841 vs. TAIR 10
Match: AT4G28990.1 (RNA-binding protein-related )

HSP 1 Score: 184.1 bits (466), Expect = 2.4e-46
Identity = 171/453 (37.75%), Postives = 206/453 (45.47%), Query Frame = 0


Query: 1   MGSRGKDSTT-HHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGELC--VAAC 60
           MGS  K+ TT HH P +SSLVVRPS S+           GR   G DYE GE+     + 
Sbjct: 1   MGSTEKEQTTQHHPPHISSLVVRPSGSN-------DREDGRNAAG-DYEPGEVSRDRPSF 60

Query: 61  KNLDLEEGFGCIRENLWRYMVVVLRVVFLCNMLLFLISYEPTPFFISGYRMHAGSVSPTR 120
              D  +G     +N                                G+R  A S SP R
Sbjct: 61  NRSDRYKG-----DN-------------------------------GGHRTRASSSSPGR 120

Query: 121 R-RDDHRYISDFDHSSGLTRGREFGGGRDL-GRYRDTSPHYSRRVSGGRPFGRGFDGPGH 180
           R  +DH++ SD +HS    RGRE    R+  GR+RD SP  +R  +G RP+ RG DGP  
Sbjct: 121 RGYEDHKHGSDLNHSGVPPRGRELSSRREAPGRHRDYSPPLARGGAGARPYRRGLDGP-- 180

Query: 181 APGPFRGERSKNN-PNVRPRDGDWYCSDPLCDNLNFARREFCNNCNRPRTGAGGSPRRGG 240
            P   R   S+NN   V+PR+GDWYC DPLC NLNFARRE C  C R R     SP    
Sbjct: 181 EPPHGRDGMSRNNISKVQPREGDWYCLDPLCRNLNFARRESCYKCKRHRYAPANSPPLPR 240

Query: 241 YVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARDGPREIAAGGLAPPRYE-SRY 300
            + PP  HSP R F             N YRSPPRGW RD P         PPR++   +
Sbjct: 241 LLPPPMNHSPRRDF-------------NGYRSPPRGWPRDYP---------PPRHDHPTW 300

Query: 301 SDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDFINERKGFERRPLSPKGFER 360
            D    RDR  Y +  +       R   SDW+                   PL    ++R
Sbjct: 301 RDR--ERDRPHYSDHEYPP----SRRIASDWA----------------HTEPLPKPHYDR 347

Query: 361 RPLSPKGFERRPLSPPPLSLLPQRGRWARDVRERSRS-PIRGPVRSPLRVPLRSPLSGGL 420
           RP         PLSP      P+ GRW R +RERSRS P+R     PLR      L GG 
Sbjct: 361 RP---------PLSP------PRGGRWGRVLRERSRSPPLRDVPPPPLRDGPPPSLRGGG 347

Query: 421 PP--KDYRRDVFVERE-RDDRRGLGRDRDGGPF 443
           PP  +DYRRD   +RE RDD RG GR R G  +
Sbjct: 421 PPLHRDYRRDSHFDRERRDDGRG-GRGRMGNSY 347

[Close]

BLAST of Carg09841 vs. TAIR 10
Match: AT5G58470.1 (TBP-associated factor 15B )

HSP 1 Score: 47.8 bits (112), Expect = 2.7e-05
Identity = 40/106 (37.74%), Postives = 46/106 (43.40%), Query Frame = 0


Query: 133 GLTRGREFGGGRD--LGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPN 192
           G   G  +GGG     GR       Y  R   G   GRG  G G   G   G+R      
Sbjct: 22  GYGGGGGYGGGDAGYGGRGASGGGSYGGRGGYGGGGGRGNRG-GGGGGYQGGDRGGRGSG 81

Query: 193 VRPRDGDWYCSDPLCDNLNFARREFCNNCN--RPRTGAGGSPRRGG 235
              RDGDW C +P C N+NFARR  CN C    P   + G+  RGG
Sbjct: 82  GGGRDGDWRCPNPSCGNVNFARRVECNKCGALAPSGTSSGANDRGG 126

[Close]

BLAST of Carg09841 vs. TAIR 10
Match: AT5G58470.2 (TBP-associated factor 15B )

HSP 1 Score: 47.8 bits (112), Expect = 2.7e-05
Identity = 40/106 (37.74%), Postives = 46/106 (43.40%), Query Frame = 0


Query: 133 GLTRGREFGGGRD--LGRYRDTSPHYSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPN 192
           G   G  +GGG     GR       Y  R   G   GRG  G G   G   G+R      
Sbjct: 22  GYGGGGGYGGGDAGYGGRGASGGGSYGGRGGYGGGGGRGNRG-GGGGGYQGGDRGGRGSG 81

Query: 193 VRPRDGDWYCSDPLCDNLNFARREFCNNCN--RPRTGAGGSPRRGG 235
              RDGDW C +P C N+NFARR  CN C    P   + G+  RGG
Sbjct: 82  GGGRDGDWRCPNPSCGNVNFARRVECNKCGALAPSGTSSGANDRGG 126

The following BLAST results are available for this feature:

BLAST of Carg09841 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023595.1	2.8e-262	100.00	hypothetical protein SDJN02_14621, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022961315.1	7.4e-223	88.69	uncharacterized protein LOC111461847 isoform X2 [Cucurbita moschata]	[more]
XP_022961316.1	3.7e-222	88.46	uncharacterized protein LOC111461847 isoform X3 [Cucurbita moschata]	[more]
KAG6589926.1	6.3e-222	88.46	Zinc finger Ran-binding domain-containing protein 2, partial [Cucurbita argyrosp...	[more]
XP_023515884.1	4.1e-221	88.01	uncharacterized protein LOC111779923 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg09841 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q92804	8.2e-07	35.24	TATA-binding protein-associated factor 2N OS=Homo sapiens OX=9606 GN=TAF15 PE=1 ...	[more]
Q28009	5.3e-06	30.68	RNA-binding protein FUS OS=Bos taurus OX=9913 GN=FUS PE=2 SV=2	[more]
P35637	5.3e-06	30.68	RNA-binding protein FUS OS=Homo sapiens OX=9606 GN=FUS PE=1 SV=1	[more]
P56959	7.7e-05	30.68	RNA-binding protein FUS OS=Mus musculus OX=10090 GN=Fus PE=1 SV=1	[more]
Q01844	1.3e-04	42.35	RNA-binding protein EWS OS=Homo sapiens OX=9606 GN=EWSR1 PE=1 SV=1	[more]

BLAST of Carg09841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBT6	3.6e-223	88.69	uncharacterized protein LOC111461847 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HA13	1.8e-222	88.46	uncharacterized protein LOC111461847 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HDP1	9.8e-221	86.73	uncharacterized protein LOC111461847 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HBF9	2.8e-220	97.40	uncharacterized protein LOC111461847 isoform X4 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JJQ1	3.7e-220	87.56	uncharacterized protein LOC111485202 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg09841 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28990.2	1.1e-46	37.09	RNA-binding protein-related	[more]
AT4G28990.1	2.4e-46	37.75	RNA-binding protein-related	[more]
AT5G58470.1	2.7e-05	37.74	TBP-associated factor 15B	[more]
AT5G58470.2	2.7e-05	37.74	TBP-associated factor 15B	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 196..222 e-value: 8.1E-4 score: 28.7
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 198..219
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 194..225 score: 9.551712
None	No IPR available	GENE3D	4.10.1060.10		coord: 184..226 e-value: 3.1E-12 score: 47.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 417..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..360
None	No IPR available	PANTHER	PTHR23238:SF26	GH13594P-RELATED	coord: 103..427
IPR034870	TAF15/EWS/TLS family	PANTHER	PTHR23238	RNA BINDING PROTEIN	coord: 103..427
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 186..225

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09841-RA	Carg09841-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding