Carg09834 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09834
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transmembrane protein 234 homolog
Location	Carg_Chr10: 2979196 .. 2979594 (-)
RNA-Seq Expression	Carg09834
Synteny	Carg09834

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGGGGTGTAGAGAAAATGGTTGCGATCGGTATAGTCTGGGGCGCCACCAATGCACTGATGCGCCGTGGCGCCCTTCTCTGGGACCAAGCTCTTAAATCTTCGTCCAATGCAACCCGCTCTTCAAACAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTTTCGATCTGGCAGTATACTGTCCCTTTTTTGGTTAATCTCACCGCCTCAGCTACTTTCTTTGCCATTCTAAGCGATGCCCCAATATCGCTCGCCGTTCCGGTAACTAACGCCACAACTTTTGCTGCCACCGCTGTTTTCGGAATGCTTCTTGGCGAGGAAACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTGATTGGGTTGGGCGTATGGCTTTGCATTAACTAA

mRNA sequence

ATGATCGGGGGTGTAGAGAAAATGGTTGCGATCGGTATAGTCTGGGGCGCCACCAATGCACTGATGCGCCGTGGCGCCCTTCTCTGGGACCAAGCTCTTAAATCTTCGTCCAATGCAACCCGCTCTTCAAACAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTTTCGATCTGGCAGTATACTGTCCCTTTTTTGGTTAATCTCACCGCCTCAGCTACTTTCTTTGCCATTCTAAGCGATGCCCCAATATCGCTCGCCGTTCCGGTAACTAACGCCACAACTTTTGCTGCCACCGCTGTTTTCGGAATGCTTCTTGGCGAGGAAACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTGATTGGGTTGGGCGTATGGCTTTGCATTAACTAA

Coding sequence (CDS)

ATGATCGGGGGTGTAGAGAAAATGGTTGCGATCGGTATAGTCTGGGGCGCCACCAATGCACTGATGCGCCGTGGCGCCCTTCTCTGGGACCAAGCTCTTAAATCTTCGTCCAATGCAACCCGCTCTTCAAACAAACTCCTCTCCTCCCTCCGTCGATGGCTCAAGCTCCTTTCGATCTGGCAGTATACTGTCCCTTTTTTGGTTAATCTCACCGCCTCAGCTACTTTCTTTGCCATTCTAAGCGATGCCCCAATATCGCTCGCCGTTCCGGTAACTAACGCCACAACTTTTGCTGCCACCGCTGTTTTCGGAATGCTTCTTGGCGAGGAAACTCGTGTCGGGTACGCTCTGTTTGGTACTGCTCTGATTGGGTTGGGCGTATGGCTTTGCATTAACTAA

Protein sequence

MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGTALIGLGVWLCIN

Homology

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BLAST of Carg09834 vs. NCBI nr
Match: KAG7023602.1 (Transmembrane protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250.0 bits (637), Expect = 1.1e-62
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60
           MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW
Sbjct: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60

Query: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120
           QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT
Sbjct: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIGLGVWLCIN 133
           ALIGLGVWLCIN
Sbjct: 121 ALIGLGVWLCIN 132

[Close]

BLAST of Carg09834 vs. NCBI nr
Match: XP_022961299.1 (transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961300.1 transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961301.1 transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961303.1 transmembrane protein 234 homolog [Cucurbita moschata])

HSP 1 Score: 247.3 bits (630), Expect = 7.5e-62
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60
           MIG VEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW
Sbjct: 1   MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60

Query: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120
           QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT
Sbjct: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIGLGVWLCIN 133
           ALIGLGVWLCIN
Sbjct: 121 ALIGLGVWLCIN 132

[Close]

BLAST of Carg09834 vs. NCBI nr
Match: XP_023516356.1 (transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.0 bits (624), Expect = 3.7e-61
Identity = 129/132 (97.73%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60
           MIG VEKMVAIG+VWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW
Sbjct: 1   MIGDVEKMVAIGMVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60

Query: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120
           QYT+PFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT
Sbjct: 61  QYTLPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIGLGVWLCIN 133
           ALIGLGVWLCIN
Sbjct: 121 ALIGLGVWLCIN 132

[Close]

BLAST of Carg09834 vs. NCBI nr
Match: XP_022987899.1 (transmembrane protein 234 homolog [Cucurbita maxima] >XP_022987900.1 transmembrane protein 234 homolog [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 6.3e-61
Identity = 129/132 (97.73%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60
           MIG VEKMVAIGI WGATNALMRRGALLWDQALKSSSNATRSSNKLLSS RRWLKLLSIW
Sbjct: 1   MIGDVEKMVAIGIAWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSFRRWLKLLSIW 60

Query: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120
           QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT
Sbjct: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIGLGVWLCIN 133
           ALIGLGVWLCIN
Sbjct: 121 ALIGLGVWLCIN 132

[Close]

BLAST of Carg09834 vs. NCBI nr
Match: XP_038879672.1 (transmembrane protein 234 homolog [Benincasa hispida])

HSP 1 Score: 228.8 bits (582), Expect = 2.7e-56
Identity = 121/132 (91.67%), Postives = 127/132 (96.21%), Query Frame = 0


Query: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60
           MIG VEKMVAIG+VWGATNALMRRGALLWDQALKSSSN+T    KLLSSLRRWLKLLSIW
Sbjct: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALKSSSNST----KLLSSLRRWLKLLSIW 60

Query: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120
           QYT+PFL+NLTASATFFAILSDAPISLAVP+TNATTFAATAVFGMLLGE+TRVGYALFGT
Sbjct: 61  QYTLPFLLNLTASATFFAILSDAPISLAVPITNATTFAATAVFGMLLGEDTRVGYALFGT 120

Query: 121 ALIGLGVWLCIN 133
           ALIGLGVWLCIN
Sbjct: 121 ALIGLGVWLCIN 128

[Close]

BLAST of Carg09834 vs. ExPASy Swiss-Prot
Match: Q54ZG7 (Transmembrane protein 234 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0277575 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.6e-11
Identity = 41/125 (32.80%), Postives = 68/125 (54.40%), Query Frame = 0


Query: 8   MVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQYTVPFL 67
           ++ +G +WG TN L++RG+           +  +  N L   +  ++ L +   YT+P L
Sbjct: 9   LLLVGFIWGGTNPLIKRGS--------EGVSKVKKDNFLSQIIYEFVYLWTRPSYTIPML 68

Query: 68  VNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGTALIGLGV 127
           +NL+ S  FF  LS   ISL VP++N+ TF  T++ GMLLGE+     +  G   +  GV
Sbjct: 69  INLSGSVVFFYTLSKVDISLVVPISNSLTFLFTSLMGMLLGEKVLHFKSYLGMIFVLAGV 125

Query: 128 WLCIN 133
            +C++
Sbjct: 129 TICVS 125

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BLAST of Carg09834 vs. ExPASy Swiss-Prot
Match: A0NGI1 (Transmembrane protein 234 homolog OS=Anopheles gambiae OX=7165 GN=AGAP012180 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 8.4e-08
Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 0


Query: 2   IGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLK---LLS 61
           I  V  ++ + I+WGATN  ++RG++ +++ LK+ S         L  L  WL+   L++
Sbjct: 14  IYAVLSILLVAIMWGATNPFIKRGSIGYNE-LKADSK--------LGQL--WLEVRFLIT 73

Query: 62  IWQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALF 121
            WQY +P ++N   S  +   L    +SL VP+ N+ TF  TA+   LLGE         
Sbjct: 74  RWQYLLPLVINQLGSIVYVLTLQRTELSLTVPMANSLTFVFTAITARLLGERQSGWKIYC 133

Query: 122 GTALIGLGVWLC 131
           G  L+ LG  +C
Sbjct: 134 GMTLVILGTVIC 134

[Close]

BLAST of Carg09834 vs. ExPASy Swiss-Prot
Match: Q8R1E7 (Transmembrane protein 234 OS=Mus musculus OX=10090 GN=Tmem234 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.7e-05
Identity = 35/129 (27.13%), Postives = 59/129 (45.74%), Query Frame = 0


Query: 3   GGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIWQY 62
           G V  +V +  +WG T  L++R +        S     R        L+    L    +Y
Sbjct: 6   GQVLALVLVAALWGGTQPLLKRAS--------SGLEQVRERTWAWQLLQEIKALFGNTEY 65

Query: 63  TVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGTAL 122
            +PFL+N + S  ++  L+   ++LAVP+ N+     T + G +LGE+     A+ G  L
Sbjct: 66  LMPFLLNQSGSLLYYLTLASTDLTLAVPICNSLAIVFTLIVGKVLGEDIGGKEAVAGMVL 125

Query: 123 IGLGVWLCI 132
              G+ +CI
Sbjct: 126 TITGITVCI 126

[Close]

BLAST of Carg09834 vs. ExPASy TrEMBL
Match: A0A6J1HBE7 (transmembrane protein 234 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461839 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.6e-62
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60
           MIG VEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW
Sbjct: 1   MIGDVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60

Query: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120
           QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT
Sbjct: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIGLGVWLCIN 133
           ALIGLGVWLCIN
Sbjct: 121 ALIGLGVWLCIN 132

[Close]

BLAST of Carg09834 vs. ExPASy TrEMBL
Match: A0A6J1JK46 (transmembrane protein 234 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485302 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.1e-61
Identity = 129/132 (97.73%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60
           MIG VEKMVAIGI WGATNALMRRGALLWDQALKSSSNATRSSNKLLSS RRWLKLLSIW
Sbjct: 1   MIGDVEKMVAIGIAWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSFRRWLKLLSIW 60

Query: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120
           QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT
Sbjct: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120

Query: 121 ALIGLGVWLCIN 133
           ALIGLGVWLCIN
Sbjct: 121 ALIGLGVWLCIN 132

[Close]

BLAST of Carg09834 vs. ExPASy TrEMBL
Match: A0A5A7VAD4 (Transmembrane protein 234-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00120 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52
Identity = 114/132 (86.36%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60
           MIG VEKMVAIG+VWGATNALMRRGALLWDQAL+SSS++T    K  SSLRRWLKL SIW
Sbjct: 1   MIGDVEKMVAIGLVWGATNALMRRGALLWDQALQSSSDST----KPFSSLRRWLKLFSIW 60

Query: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120
           QYT+PFL+NLTASATFFAILSDAPISLAVPVTNATTFAATAVFG+LLGE+TRVGYALFGT
Sbjct: 61  QYTLPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVGYALFGT 120

Query: 121 ALIGLGVWLCIN 133
           ALIG GVWLCI+
Sbjct: 121 ALIGFGVWLCIS 128

[Close]

BLAST of Carg09834 vs. ExPASy TrEMBL
Match: A0A1S4E4M5 (transmembrane protein 234 homolog OS=Cucumis melo OX=3656 GN=LOC103501037 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.0e-52
Identity = 114/132 (86.36%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60
           MIG VEKMVAIG+VWGATNALMRRGALLWDQAL+SSS++T    K  SSLRRWLKL SIW
Sbjct: 11  MIGDVEKMVAIGLVWGATNALMRRGALLWDQALQSSSDST----KPFSSLRRWLKLFSIW 70

Query: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120
           QYT+PFL+NLTASATFFAILSDAPISLAVPVTNATTFAATAVFG+LLGE+TRVGYALFGT
Sbjct: 71  QYTLPFLLNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGVLLGEDTRVGYALFGT 130

Query: 121 ALIGLGVWLCIN 133
           ALIG GVWLCI+
Sbjct: 131 ALIGFGVWLCIS 138

[Close]

BLAST of Carg09834 vs. ExPASy TrEMBL
Match: A0A0A0LT65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G202290 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.4e-51
Identity = 112/132 (84.85%), Postives = 117/132 (88.64%), Query Frame = 0


Query: 1   MIGGVEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRSSNKLLSSLRRWLKLLSIW 60
           MIG VEKMVAIG+VWGATN LMRRGALLWDQALKSSS++T    K  SSLRRWLKL SIW
Sbjct: 2   MIGDVEKMVAIGLVWGATNVLMRRGALLWDQALKSSSDST----KPFSSLRRWLKLFSIW 61

Query: 61  QYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFGT 120
           QYT+PF +NLTASATFF ILS APISLAVPVTNATTFAATAVFGMLLGE TRVGYALFGT
Sbjct: 62  QYTLPFFLNLTASATFFTILSHAPISLAVPVTNATTFAATAVFGMLLGEATRVGYALFGT 121

Query: 121 ALIGLGVWLCIN 133
            LIG GVWLCIN
Sbjct: 122 TLIGFGVWLCIN 129

[Close]

BLAST of Carg09834 vs. TAIR 10
Match: AT5G19570.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0546 (InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 166.0 bits (419), Expect = 2.0e-41
Identity = 83/132 (62.88%), Postives = 106/132 (80.30%), Query Frame = 0


Query: 5   VEKMVAIGIVWGATNALMRRGALLWDQALKSSSNATRS-----SNKLLSSLRRWLKLLSI 64
           ++KMVA+G+VWGATNAL+RRGAL WD+   SS+  + S       K++ +LR W+ LL  
Sbjct: 5   MDKMVAVGLVWGATNALIRRGALAWDKTKSSSTTESHSPPLQIRRKIMIALRDWINLLLF 64

Query: 65  WQYTVPFLVNLTASATFFAILSDAPISLAVPVTNATTFAATAVFGMLLGEETRVGYALFG 124
           WQY++PFL+NL+ASATFFA+LS APISLAVPVTNATTFAATA FG+LLGEET++G AL G
Sbjct: 65  WQYSIPFLINLSASATFFALLSHAPISLAVPVTNATTFAATAAFGILLGEETQIGLALLG 124

Query: 125 TALIGLGVWLCI 132
           T+ I  G+WLC+
Sbjct: 125 TSFIVFGIWLCV 136

The following BLAST results are available for this feature:

BLAST of Carg09834 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023602.1	1.1e-62	100.00	Transmembrane protein-like protein, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022961299.1	7.5e-62	99.24	transmembrane protein 234 homolog [Cucurbita moschata] >XP_022961300.1 transmemb...	[more]
XP_023516356.1	3.7e-61	97.73	transmembrane protein 234 homolog isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022987899.1	6.3e-61	97.73	transmembrane protein 234 homolog [Cucurbita maxima] >XP_022987900.1 transmembra...	[more]
XP_038879672.1	2.7e-56	91.67	transmembrane protein 234 homolog [Benincasa hispida]	[more]

BLAST of Carg09834 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54ZG7	3.6e-11	32.80	Transmembrane protein 234 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0...	[more]
A0NGI1	8.4e-08	32.58	Transmembrane protein 234 homolog OS=Anopheles gambiae OX=7165 GN=AGAP012180 PE=...	[more]
Q8R1E7	8.7e-05	27.13	Transmembrane protein 234 OS=Mus musculus OX=10090 GN=Tmem234 PE=1 SV=1	[more]

BLAST of Carg09834 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBE7	3.6e-62	99.24	transmembrane protein 234 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461839 ...	[more]
A0A6J1JK46	3.1e-61	97.73	transmembrane protein 234 homolog OS=Cucurbita maxima OX=3661 GN=LOC111485302 PE...	[more]
A0A5A7VAD4	2.0e-52	86.36	Transmembrane protein 234-like protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4E4M5	2.0e-52	86.36	transmembrane protein 234 homolog OS=Cucumis melo OX=3656 GN=LOC103501037 PE=3 S...	[more]
A0A0A0LT65	6.4e-51	84.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G202290 PE=3 SV=1	[more]

BLAST of Carg09834 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19570.1	2.0e-41	62.88	unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018908	Putative transmembrane family 234	PFAM	PF10639	TMEM234	coord: 8..131 e-value: 6.1E-26 score: 90.7
IPR018908	Putative transmembrane family 234	PANTHER	PTHR28668	TRANSMEMBRANE PROTEIN 234	coord: 1..132
None	No IPR available	GENE3D	1.10.3730.20		coord: 25..132 e-value: 3.4E-7 score: 32.4
None	No IPR available	SUPERFAMILY	103481	Multidrug resistance efflux transporter EmrE	coord: 49..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09834-RA	Carg09834-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane