Carg09831 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09831
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	TF-B3 domain-containing protein
Location	Carg_Chr10: 2997062 .. 2997547 (-)
RNA-Seq Expression	Carg09831
Synteny	Carg09831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACGAAAACGAAGCTCCATCCATCAACGGCGATGAAGACGTGGCGTTGGAAGTGGAGGAAGTAGCAGAGGTAGTAGCTCCAGTGGTGATTCCGGCGTTGGCGGTTATTATGAACATAATTGGAGCACGTAGCCCGCCGTGGGAGAAGCGGTTGACGAAAAGCGACGTGTCGGAAGGGCAGGGGAGATTGATAGTACGGAAGGAATTTGTGACGAATCATTTGTTGCCAATGTTCAATGCGGATGAGGATCCGAGTGAGGGGATTGATGTTACGGTTTATAATGGTGAAGGGAGACAATACGATATGCAGTTCAAACTCTGGGCTTCTAAGCTTTACGTCCTCACCAAAGGCTGGAACGACTTTTACAAGACCAATAATTTGACAGAGCCTGGCCTGTATGTCACTCTGTGGATGTTCCGACATGTCGAAACTCACAAGATTTGTTTTGCCGTTACTGCCGGACAGTTTGGAGAGCCTTGA

mRNA sequence

ATGGATGACGAAAACGAAGCTCCATCCATCAACGGCGATGAAGACGTGGCGTTGGAAGTGGAGGAAGTAGCAGAGGTAGTAGCTCCAGTGGTGATTCCGGCGTTGGCGGTTATTATGAACATAATTGGAGCACGTAGCCCGCCGTGGGAGAAGCGGTTGACGAAAAGCGACGTGTCGGAAGGGCAGGGGAGATTGATAGTACGGAAGGAATTTGTGACGAATCATTTGTTGCCAATGTTCAATGCGGATGAGGATCCGAGTGAGGGGATTGATGTTACGGTTTATAATGGTGAAGGGAGACAATACGATATGCAGTTCAAACTCTGGGCTTCTAAGCTTTACGTCCTCACCAAAGGCTGGAACGACTTTTACAAGACCAATAATTTGACAGAGCCTGGCCTGTATGTCACTCTGTGGATGTTCCGACATGTCGAAACTCACAAGATTTGTTTTGCCGTTACTGCCGGACAGTTTGGAGAGCCTTGA

Coding sequence (CDS)

ATGGATGACGAAAACGAAGCTCCATCCATCAACGGCGATGAAGACGTGGCGTTGGAAGTGGAGGAAGTAGCAGAGGTAGTAGCTCCAGTGGTGATTCCGGCGTTGGCGGTTATTATGAACATAATTGGAGCACGTAGCCCGCCGTGGGAGAAGCGGTTGACGAAAAGCGACGTGTCGGAAGGGCAGGGGAGATTGATAGTACGGAAGGAATTTGTGACGAATCATTTGTTGCCAATGTTCAATGCGGATGAGGATCCGAGTGAGGGGATTGATGTTACGGTTTATAATGGTGAAGGGAGACAATACGATATGCAGTTCAAACTCTGGGCTTCTAAGCTTTACGTCCTCACCAAAGGCTGGAACGACTTTTACAAGACCAATAATTTGACAGAGCCTGGCCTGTATGTCACTCTGTGGATGTTCCGACATGTCGAAACTCACAAGATTTGTTTTGCCGTTACTGCCGGACAGTTTGGAGAGCCTTGA

Protein sequence

MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP

Homology

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BLAST of Carg09831 vs. NCBI nr
Match: KAG7023605.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.6 bits (849), Expect = 3.7e-87
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSE 60
           MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSE
Sbjct: 1   MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSE 60

Query: 61  GQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGW 120
           GQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGW
Sbjct: 61  GQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGW 120

Query: 121 NDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP 162
           NDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP
Sbjct: 121 NDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP 161

[Close]

BLAST of Carg09831 vs. NCBI nr
Match: KAG6589940.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 330.5 bits (846), Expect = 8.2e-87
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSE 60
           MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSE
Sbjct: 52  MDDENEAPSINGDEDVALEVEEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSE 111

Query: 61  GQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGW 120
           GQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGW
Sbjct: 112 GQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGW 171

Query: 121 NDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQFGEP 162
           NDFYKTNNLT+PGLYVTLWMFRHVETHKICFAVTAGQFGEP
Sbjct: 172 NDFYKTNNLTDPGLYVTLWMFRHVETHKICFAVTAGQFGEP 212

[Close]

BLAST of Carg09831 vs. NCBI nr
Match: KGN56101.1 (hypothetical protein Csa_010492 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 2.0e-40
Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 33  PALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDV 92
           P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L PMFN DED  +GI V
Sbjct: 100 PPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISV 159

Query: 93  TVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFA 152
            VY+ EGR+YDM FKLWASKLYVLTK W +FYKTN+LT+PG ++++WMFRHV T K+CFA
Sbjct: 160 IVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFA 219

Query: 153 VTAGQ 158
           +  GQ
Sbjct: 220 IMRGQ 224

[Close]

BLAST of Carg09831 vs. NCBI nr
Match: XP_031736688.1 (uncharacterized protein LOC116402065 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 2.8e-39
Identity = 86/154 (55.84%), Postives = 108/154 (70.13%), Query Frame = 0


Query: 5   NEAPSINGDEDVALEV--EEVAEVVAPVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQ 64
           NEA   N +E+VA+ V   +   V      P +AVI NIIG  SPP+ K+L K+DV+E Q
Sbjct: 71  NEALPNNNNENVAVAVAGRDWGRV------PPMAVIQNIIGECSPPFVKQLMKTDVTESQ 130

Query: 65  GRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWND 124
           GRL + KEFVT +L+PMFN  E+   GI VTVY+ EGR+YDM FK W SKLYVLTK WN 
Sbjct: 131 GRLALHKEFVTRNLIPMFNRGENLKNGISVTVYDSEGREYDMIFKFWTSKLYVLTKSWNK 190

Query: 125 FYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAG 157
           FYK+NNLT PG ++++WMFRHV   K+CFA+  G
Sbjct: 191 FYKSNNLTRPGEFISVWMFRHVVNRKLCFAIMRG 218

[Close]

BLAST of Carg09831 vs. NCBI nr
Match: KAA0043114.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 putative B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 169.9 bits (429), Expect = 1.8e-38
Identity = 82/139 (58.99%), Postives = 100/139 (71.94%), Query Frame = 0


Query: 21  EEVAEVVAP---VVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLL 80
           E VA VVA      +P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L+
Sbjct: 83  ENVAAVVADRDLGRLPPMAVIQNIIGECSPPFVKQLTKTDVTDSQGRLALHKEFVNRNLV 142

Query: 81  PMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVT 140
           PMFN DE  + GI VTVY+ EGR+YDM F+LW SKLYVLTK W  FY  N LT P  ++T
Sbjct: 143 PMFNGDEILTNGISVTVYDSEGREYDMTFRLWTSKLYVLTKSWKKFYHDNGLTRPDEFIT 202

Query: 141 LWMFRHVETHKICFAVTAG 157
           LWMFRHV  HK+CFA+  G
Sbjct: 203 LWMFRHVVNHKLCFAIMRG 221

[Close]

BLAST of Carg09831 vs. ExPASy Swiss-Prot
Match: Q9ZR14 (Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 GN=At4g03170 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-20
Identity = 47/109 (43.12%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 46  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQ 105
           S P +K+L  SDV + Q  L++ KE V   +LP     E+P +GIDV+VY  +G+   M+
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 106 FKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAV 154
           FK+W   K  VLT GW  F +   L+    +VT+WMFRH++T K+CFA+
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of Carg09831 vs. ExPASy Swiss-Prot
Match: Q9ZR15 (Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 GN=At4g03160 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-15
Identity = 38/108 (35.19%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 51  KRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWA 110
           ++L  SDV + Q RL++ KE V   +  +   ++  ++G++V+VY   G  + M  K+W 
Sbjct: 67  EQLMDSDVKDNQYRLMLGKEPVKKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVLKIWI 126

Query: 111 SKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQF 159
               VLT GW +F K+  L +   ++T+WMFRH +T +ICFA+ + +F
Sbjct: 127 KGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAIDSTRF 174

[Close]

BLAST of Carg09831 vs. ExPASy Swiss-Prot
Match: Q9LM90 (B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20600 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 8.1e-13
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 46  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQ 105
           S P +K+L  SDV   Q RL++ KE V   +LP     EDP +G+DV+VY  +G    M+
Sbjct: 122 SRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMK 181

Query: 106 FKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVT 138
           FK+W   K  VLT GW  F     L +   +VT
Sbjct: 182 FKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVT 214

[Close]

BLAST of Carg09831 vs. ExPASy Swiss-Prot
Match: Q9C688 (AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis thaliana OX=3702 GN=At1g51120 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-06
Identity = 31/95 (32.63%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 49  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADE---DPSEG---IDVTVYNGEGRQY 108
           ++K LT SDV +   RL++ K++   + +P  + D+   + SEG   ++V  Y+   RQ+
Sbjct: 178 FQKELTPSDVGK-LNRLVIPKKYAVKY-MPFISDDQSEKETSEGVEDVEVVFYDRAMRQW 237

Query: 109 DMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYV 137
             ++  W +S+ +V T+GWN F K  NL E  + V
Sbjct: 238 KFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIV 270

[Close]

BLAST of Carg09831 vs. ExPASy Swiss-Prot
Match: Q9C6P5 (AP2/ERF and B3 domain-containing transcription factor At1g50680 OS=Arabidopsis thaliana OX=3702 GN=At1g50680 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06
Identity = 29/93 (31.18%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 49  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPS---------EGIDVTVYNGEG 108
           ++K LT SDV +   RL++ K++   + +P  +AD+            E ++V  Y+   
Sbjct: 157 FQKELTPSDVGK-LNRLVIPKKYAVKY-MPFISADQSEKEEGEIVGSVEDVEVVFYDRAM 216

Query: 109 RQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTE 132
           RQ+  ++  W +S+ +V T+GWN F K  NL E
Sbjct: 217 RQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKE 247

[Close]

BLAST of Carg09831 vs. ExPASy TrEMBL
Match: A0A0A0L7L0 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 9.5e-41
Identity = 80/125 (64.00%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 33  PALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDV 92
           P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L PMFN DED  +GI V
Sbjct: 100 PPMAVIQNIIGECSPPFVKQLTKTDVTDNQGRLALHKEFVNLNLDPMFNDDEDLEDGISV 159

Query: 93  TVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFA 152
            VY+ EGR+YDM FKLWASKLYVLTK W +FYKTN+LT+PG ++++WMFRHV T K+CFA
Sbjct: 160 IVYDIEGREYDMIFKLWASKLYVLTKSWKEFYKTNDLTQPGEFISVWMFRHVVTQKLCFA 219

Query: 153 VTAGQ 158
           +  GQ
Sbjct: 220 IMRGQ 224

[Close]

BLAST of Carg09831 vs. ExPASy TrEMBL
Match: A0A0A0LC65 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39
Identity = 76/122 (62.30%), Postives = 94/122 (77.05%), Query Frame = 0


Query: 35  LAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTV 94
           +AVI NIIG  SPP+ K+L K+DV+E QGRL + KEFVT +L+PMFN  E+   GI VTV
Sbjct: 1   MAVIQNIIGECSPPFVKQLMKTDVTESQGRLALHKEFVTRNLIPMFNRGENLKNGISVTV 60

Query: 95  YNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVT 154
           Y+ EGR+YDM FK W SKLYVLTK WN FYK+NNLT PG ++++WMFRHV   K+CFA+ 
Sbjct: 61  YDSEGREYDMIFKFWTSKLYVLTKSWNKFYKSNNLTRPGEFISVWMFRHVVNRKLCFAIM 120

Query: 155 AG 157
            G
Sbjct: 121 RG 122

[Close]

BLAST of Carg09831 vs. ExPASy TrEMBL
Match: A0A5D3BAS8 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00040 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 8.9e-39
Identity = 82/139 (58.99%), Postives = 100/139 (71.94%), Query Frame = 0


Query: 21  EEVAEVVAP---VVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLL 80
           E VA VVA      +P +AVI NIIG  SPP+ K+LTK+DV++ QGRL + KEFV  +L+
Sbjct: 83  ENVAAVVADRDLGRLPPMAVIQNIIGECSPPFVKQLTKTDVTDSQGRLALHKEFVNRNLV 142

Query: 81  PMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVT 140
           PMFN DE  + GI VTVY+ EGR+YDM F+LW SKLYVLTK W  FY  N LT P  ++T
Sbjct: 143 PMFNGDEILTNGISVTVYDSEGREYDMTFRLWTSKLYVLTKSWKKFYHDNGLTRPDEFIT 202

Query: 141 LWMFRHVETHKICFAVTAG 157
           LWMFRHV  HK+CFA+  G
Sbjct: 203 LWMFRHVVNHKLCFAIMRG 221

[Close]

BLAST of Carg09831 vs. ExPASy TrEMBL
Match: A0A6J1CTE7 (putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 GN=LOC111014582 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.6e-33
Identity = 74/130 (56.92%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 32  IPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFN---ADEDPSE 91
           +P +  I ++IG  S  +EKRLT SDV+E QGRL + KEFVT +L PMFN    +E+  E
Sbjct: 108 MPPVPAIRDVIGQCSRAYEKRLTVSDVAEAQGRLAIGKEFVTKYLAPMFNNKDENENLRE 167

Query: 92  GIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLT--EPGLYVTLWMFRHVET 151
           GI+VTVYN EGR++ M FK+WASKLYVL KGW  F K NNLT    G ++TLWMFRH  T
Sbjct: 168 GIEVTVYNREGREFGMTFKIWASKLYVLMKGWKPFCKANNLTHAHAGEFLTLWMFRHRRT 227

Query: 152 HKICFAVTAG 157
           H +CFA+  G
Sbjct: 228 HGLCFAIILG 237

[Close]

BLAST of Carg09831 vs. ExPASy TrEMBL
Match: A0A5N5GPP9 (B3 domain-containing protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_013388 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 6.6e-26
Identity = 58/131 (44.27%), Postives = 85/131 (64.89%), Query Frame = 0


Query: 28  APVVIPALAVIMNIIGARSPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPS 87
           AP  +P +  +  +I A S P+EK+LT SDV + Q RL + KE V NH+ P+   DEDP+
Sbjct: 19  APPDLPPVPSLRPLIQAHSKPFEKQLTSSDVRDDQSRLSMSKEDVENHIFPLLKDDEDPN 78

Query: 88  EGIDVTVYNGEGRQYDMQFKLWASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETH 147
           +G+ VT+Y+ +G++Y M FK W SK+ VLT GWN F +   L E   +VT+W FR+V   
Sbjct: 79  QGVHVTIYDMDGKEYPMVFKTWMSKINVLTGGWNSFRQDRRLVEKIDFVTVWDFRNVVNG 138

Query: 148 KICFAVTAGQF 159
            +CFA+ + +F
Sbjct: 139 SLCFAINSRRF 149

[Close]

BLAST of Carg09831 vs. TAIR 10
Match: AT4G03170.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-21
Identity = 47/109 (43.12%), Postives = 68/109 (62.39%), Query Frame = 0


Query: 46  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQ 105
           S P +K+L  SDV + Q  L++ KE V   +LP     E+P +GIDV+VY  +G+   M+
Sbjct: 133 SRPIKKQLMSSDVDKDQCMLMLSKEQVKEKMLPFLEDSENPVKGIDVSVYGPDGKVQQME 192

Query: 106 FKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAV 154
           FK+W   K  VLT GW  F +   L+    +VT+WMFRH++T K+CFA+
Sbjct: 193 FKMWNGDKTPVLTSGWKQFVEDYGLSMTCDFVTVWMFRHIKTRKLCFAI 241

[Close]

BLAST of Carg09831 vs. TAIR 10
Match: AT4G03160.1 (BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1); Has 46 Blast hits to 46 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-16
Identity = 38/108 (35.19%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 51  KRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQFKLWA 110
           ++L  SDV + Q RL++ KE V   +  +   ++  ++G++V+VY   G  + M  K+W 
Sbjct: 67  EQLMDSDVKDNQYRLMLGKEPVKKMMDALGKTEKLGTKGLNVSVYGPNGENHKMVLKIWI 126

Query: 111 SKLYVLTKGWNDFYKTNNLTEPGLYVTLWMFRHVETHKICFAVTAGQF 159
               VLT GW +F K+  L +   ++T+WMFRH +T +ICFA+ + +F
Sbjct: 127 KGTPVLTSGWKNFVKSYKLEKHVDFLTIWMFRHKKTREICFAIDSTRF 174

[Close]

BLAST of Carg09831 vs. TAIR 10
Match: AT1G20600.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 75.1 bits (183), Expect = 5.8e-14
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 46  SPPWEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPSEGIDVTVYNGEGRQYDMQ 105
           S P +K+L  SDV   Q RL++ KE V   +LP     EDP +G+DV+VY  +G    M+
Sbjct: 122 SRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMK 181

Query: 106 FKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYVT 138
           FK+W   K  VLT GW  F     L +   +VT
Sbjct: 182 FKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVT 214

[Close]

BLAST of Carg09831 vs. TAIR 10
Match: AT1G51120.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-07
Identity = 31/95 (32.63%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 49  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADE---DPSEG---IDVTVYNGEGRQY 108
           ++K LT SDV +   RL++ K++   + +P  + D+   + SEG   ++V  Y+   RQ+
Sbjct: 178 FQKELTPSDVGK-LNRLVIPKKYAVKY-MPFISDDQSEKETSEGVEDVEVVFYDRAMRQW 237

Query: 109 DMQFKLW-ASKLYVLTKGWNDFYKTNNLTEPGLYV 137
             ++  W +S+ +V T+GWN F K  NL E  + V
Sbjct: 238 KFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIV 270

[Close]

BLAST of Carg09831 vs. TAIR 10
Match: AT1G50680.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-07
Identity = 29/93 (31.18%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 49  WEKRLTKSDVSEGQGRLIVRKEFVTNHLLPMFNADEDPS---------EGIDVTVYNGEG 108
           ++K LT SDV +   RL++ K++   + +P  +AD+            E ++V  Y+   
Sbjct: 157 FQKELTPSDVGK-LNRLVIPKKYAVKY-MPFISADQSEKEEGEIVGSVEDVEVVFYDRAM 216

Query: 109 RQYDMQFKLW-ASKLYVLTKGWNDFYKTNNLTE 132
           RQ+  ++  W +S+ +V T+GWN F K  NL E
Sbjct: 217 RQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKE 247

The following BLAST results are available for this feature:

BLAST of Carg09831 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023605.1	3.7e-87	100.00	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. ar...	[more]
KAG6589940.1	8.2e-87	99.38	putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. so...	[more]
KGN56101.1	2.0e-40	64.00	hypothetical protein Csa_010492 [Cucumis sativus]	[more]
XP_031736688.1	2.8e-39	55.84	uncharacterized protein LOC116402065 [Cucumis sativus]	[more]
KAA0043114.1	1.8e-38	58.99	putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 put...	[more]

BLAST of Carg09831 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR14	1.8e-20	43.12	Putative B3 domain-containing protein At4g03170 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZR15	2.3e-15	35.19	Putative B3 domain-containing protein At4g03160 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LM90	8.1e-13	40.86	B3 domain-containing protein At1g20600 OS=Arabidopsis thaliana OX=3702 GN=At1g20...	[more]
Q9C688	1.9e-06	32.63	AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis t...	[more]
Q9C6P5	3.3e-06	31.18	AP2/ERF and B3 domain-containing transcription factor At1g50680 OS=Arabidopsis t...	[more]

BLAST of Carg09831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7L0	9.5e-41	64.00	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 ...	[more]
A0A0A0LC65	4.0e-39	62.30	TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 ...	[more]
A0A5D3BAS8	8.9e-39	58.99	Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1CTE7	5.6e-33	56.92	putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 G...	[more]
A0A5N5GPP9	6.6e-26	44.27	B3 domain-containing protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN...	[more]

BLAST of Carg09831 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03170.1	1.3e-21	43.12	AP2/B3-like transcriptional factor family protein	[more]
AT4G03160.1	1.6e-16	35.19	BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor f...	[more]
AT1G20600.1	5.8e-14	40.86	AP2/B3-like transcriptional factor family protein	[more]
AT1G51120.1	1.4e-07	32.63	AP2/B3 transcription factor family protein	[more]
AT1G50680.1	2.3e-07	31.18	AP2/B3 transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 49..153 e-value: 9.1E-7 score: 38.5
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 49..131 e-value: 8.2E-11 score: 41.7
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 50..157 score: 9.699661
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 51..151 e-value: 6.16205E-14 score: 61.9601
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 43..156 e-value: 3.9E-21 score: 76.8
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 47..151
None	No IPR available	PANTHER	PTHR31541:SF28	B3 DOMAIN PLANT PROTEIN	coord: 31..155
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 31..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09831-RA	Carg09831-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding