Carg09812 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09812
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CRM domain-containing protein
Location	Carg_Chr14: 2788791 .. 2791434 (-)
RNA-Seq Expression	Carg09812
Synteny	Carg09812

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAATCTTTGTTTCATAATCTTCGCAGAGCTTCTCTGCTTTTCAGGTCTTCATCTCTGAACCAACCATTTTTCAGGTACTCTTCAGTCAAGGTTCCTCCATCTTCTTAATATTATTGATGTGTTTTACTTTTGAACAGCAGTTTTCATCTTCTTTTCCTTAGATTTTCCACTCTAGTGATAAATTTCTTTGTTGATCCATTGCTTTCAAAAAAATTTAACCTAGCCAACCGGGTTTGAGATTGGAAGAAAATGGCTTGTATTTGACTTTGAAAGACAGAAATAGTGTAGAATATATAACTTTTGATGAATTTTCTGCTTGAATTTTACTGTGTTTACACCATATATTCTGTTGCAGACCTGTCCTTGGGGTTCCTGACTCTACTTTCTCTCGTATAAAAAACTTTCCTCTGCTGAACATCTCAAGACCTTTGTTGGGATTTAGAAATTTAAGCTATGGTTCCGTGAATCTTGTCATATCCCAAGGGAAACCGAAGTTTGAAACACATGAAGTGGATCCTCCAAAAAAAGACAAGTGGAAGACTAAGAAAAAATTGAAGATGCAGCGAAAGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAGCAGAAATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTTGAAAAGGTAAGTAAAAAAAGAATGGTTTCAGAATGTTATATGGGTCTATATTGTTAAAGTCCAGCGTATTTTATGGTATCACCAATGTTTTTGGCGAAGTTTGCTCATTTCAAAAGAAAAAGAATTACTTCATGAGCATTTCTTTTCATTCTGCTGCTGAACTGCAGCGAGATGGTTTTCAAATTAATGGATGTTGGAAATTTTTCATATGATTTCAGTTACAGTTATAGTGATTTTGCTGCAGGCCAGGATTAAAGAAGCTTTACTGATTGAGAGATTGAAACGGTATGAAGTTCCTAGAGTTCAGGGTCCTGTGGTGGAACCACACAATCTGACTGCAGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGATCTAATTATGTACCTATTGGAAGAAGAGGAGTTTTTGGAGGTGTGATTTTAAACATGCACATGCATTGGAAGAAACACGAAACAGTGAAAGTTTTTTGCAAACCTTGTAAACCTGGCCAAGTGCATGAGTACGCACAGGAAATTGCAAGATTGAGTGGAGGAATCCCAATACAGATAATTGGTGATGATACTATCATCTTCTATCGAGGAAAGGAATATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGTTAGTTTTTAAAATTTCCAGTTTTCATTAATGTATATGATGTCTTTTTCTTTTCTTTCTCTTTTTTATAATCGGAGTTCGTGGGCCAGTGCATCTTTATTTAAGACATAATAGCACGGGAGGATATCAGTAGGACTATTTGGCTTTTCGACCATAAAATATGTGCGTGGGAGTCGGCTGTGTAGTTAAGTAATGGTATTGAAGTTAGAGAAGTGTGAGTTTCTCCTAAGCATGTACTTTTGTTTTTGGATTGATGGAGTGTCAATACATGGGAGGGAAATTCAATCCTCTCAAAGACTTGGAGAGTGTAATGGTCCAAGCCCACTGCTAGCAGATATTGTCCTCTTTGAGTTTTCTCTTTTGGACTTTCCCTCAAGGATCTTAAGGCGCGTCTGCTAGGGAGAGATTTTCACACCCTTATAAAGAAGCTTTCGTTCTCCTCTCCAACTGATGTGGGTCTCACAGAGAGTTTGTCAAGTTTTGACTCTTGTTGTGTGATTCCTATCAAGCTGTCAGTGTCGGTACCTAGAAAATAGTGCAGCTTTTCCATTTTCATCTTTAGATTAGCTTGATCAGAGAATAACGTGCTGACATTAGATTGTTGTATGAAAAGCTTTCATTTAACAGCAAATACCAAATGTTGCAAACTTGGTCTGTCTAATTGGATTTAATAGTTGTGTTATGGTATTGTTGGCCTTTTGTTATCCAATCTGTTTGCTGTATGTATGCTTAAAACCTCAATGTTCATGTTTATGTGGATTCTGTTTGTAGGAAATTGATTATTAATAAAACATACCAATGGCTTCCCTCCTTGCAGGCACTAGAAAAGTCCAAGTACGAGCAATCCCTCGAGTCTGTTCGCCGTTTCATTGCCATTGCTGAAAAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCGAATGATAGGAATCCATTGTCCATCTTAGACCTTCCATCTGACAACTTGAAGAATTCACAGAAACATCAGGTCGATGAAATGGAAGACTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTATGAACAAGCGAAATCCTGAATTTTCGGATGACGAATCGTTAGAGATTGGAGAAGAATTTGCAGATTCCTGCTTTTCTACAAGTGAAGCAGAATTTGAAAGTGACATATTAGATGATTTTGAACATGGGAGGATCGAAGGAAGTTTTTCTCAGACAGGAGAGATGTCCTCAACCACAATGAACACTTGTTCAGCTTCCCAGAACAAATTTGAGTTTCATAACCAAGAACTACCAATACACATAAAAATGACATGA

mRNA sequence

ATGGCAAAATCTTTGTTTCATAATCTTCGCAGAGCTTCTCTGCTTTTCAGGTCTTCATCTCTGAACCAACCATTTTTCAGACCTGTCCTTGGGGTTCCTGACTCTACTTTCTCTCGTATAAAAAACTTTCCTCTGCTGAACATCTCAAGACCTTTGTTGGGATTTAGAAATTTAAGCTATGGTTCCGTGAATCTTGTCATATCCCAAGGGAAACCGAAGTTTGAAACACATGAAGTGGATCCTCCAAAAAAAGACAAGTGGAAGACTAAGAAAAAATTGAAGATGCAGCGAAAGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAGCAGAAATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTTGAAAAGGCCAGGATTAAAGAAGCTTTACTGATTGAGAGATTGAAACGGTATGAAGTTCCTAGAGTTCAGGGTCCTGTGGTGGAACCACACAATCTGACTGCAGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGATCTAATTATGTACCTATTGGAAGAAGAGGAGTTTTTGGAGGTGTGATTTTAAACATGCACATGCATTGGAAGAAACACGAAACAGTGAAAGTTTTTTGCAAACCTTGTAAACCTGGCCAAGTGCATGAGTACGCACAGGAAATTGCAAGATTGAGTGGAGGAATCCCAATACAGATAATTGGTGATGATACTATCATCTTCTATCGAGGAAAGGAATATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGCACTAGAAAAGTCCAAGTACGAGCAATCCCTCGAGTCTGTTCGCCGTTTCATTGCCATTGCTGAAAAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCGAATGATAGGAATCCATTGTCCATCTTAGACCTTCCATCTGACAACTTGAAGAATTCACAGAAACATCAGGTCGATGAAATGGAAGACTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTATGAACAAGCGAAATCCTGAATTTTCGGATGACGAATCGTTAGAGATTGGAGAAGAATTTGCAGATTCCTGCTTTTCTACAAGTGAAGCAGAATTTGAAAGTGACATATTAGATGATTTTGAACATGGGAGGATCGAAGGAAGTTTTTCTCAGACAGGAGAGATGTCCTCAACCACAATGAACACTTGTTCAGCTTCCCAGAACAAATTTGAGTTTCATAACCAAGAACTACCAATACACATAAAAATGACATGA

Coding sequence (CDS)

ATGGCAAAATCTTTGTTTCATAATCTTCGCAGAGCTTCTCTGCTTTTCAGGTCTTCATCTCTGAACCAACCATTTTTCAGACCTGTCCTTGGGGTTCCTGACTCTACTTTCTCTCGTATAAAAAACTTTCCTCTGCTGAACATCTCAAGACCTTTGTTGGGATTTAGAAATTTAAGCTATGGTTCCGTGAATCTTGTCATATCCCAAGGGAAACCGAAGTTTGAAACACATGAAGTGGATCCTCCAAAAAAAGACAAGTGGAAGACTAAGAAAAAATTGAAGATGCAGCGAAAGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTGTAAAGGGGAAGAAAAAGCAGAAATTTTCAAATGCAGAAGAGAGAATCAAGCACAAGCTTGAAAAGGCCAGGATTAAAGAAGCTTTACTGATTGAGAGATTGAAACGGTATGAAGTTCCTAGAGTTCAGGGTCCTGTGGTGGAACCACACAATCTGACTGCAGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGATCTAATTATGTACCTATTGGAAGAAGAGGAGTTTTTGGAGGTGTGATTTTAAACATGCACATGCATTGGAAGAAACACGAAACAGTGAAAGTTTTTTGCAAACCTTGTAAACCTGGCCAAGTGCATGAGTACGCACAGGAAATTGCAAGATTGAGTGGAGGAATCCCAATACAGATAATTGGTGATGATACTATCATCTTCTATCGAGGAAAGGAATATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGCACTAGAAAAGTCCAAGTACGAGCAATCCCTCGAGTCTGTTCGCCGTTTCATTGCCATTGCTGAAAAGGAACTGGAGCTATATTACAGGCATGTTGCACTTTATGGTGACCCGAATGATAGGAATCCATTGTCCATCTTAGACCTTCCATCTGACAACTTGAAGAATTCACAGAAACATCAGGTCGATGAAATGGAAGACTCTCATTCTGCTGCTCTTTGCTTAGCATCTGATGTTATGAACAAGCGAAATCCTGAATTTTCGGATGACGAATCGTTAGAGATTGGAGAAGAATTTGCAGATTCCTGCTTTTCTACAAGTGAAGCAGAATTTGAAAGTGACATATTAGATGATTTTGAACATGGGAGGATCGAAGGAAGTTTTTCTCAGACAGGAGAGATGTCCTCAACCACAATGAACACTTGTTCAGCTTCCCAGAACAAATTTGAGTTTCATAACCAAGAACTACCAATACACATAAAAATGACATGA

Protein sequence

MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSYGSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIHIKMT

Homology

[Close]

BLAST of Carg09812 vs. NCBI nr
Match: KAG7017679.1 (putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 846.3 bits (2185), Expect = 1.2e-241
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60
           MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180
           KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300
           QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300

Query: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360
           YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS
Sbjct: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360

Query: 361 DDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420
           DDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK
Sbjct: 361 DDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420

Query: 421 FEFHNQELPIHIKMT 436
           FEFHNQELPIHIKMT
Sbjct: 421 FEFHNQELPIHIKMT 435

[Close]

BLAST of Carg09812 vs. NCBI nr
Match: XP_022935659.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata])

HSP 1 Score: 841.3 bits (2172), Expect = 3.8e-240
Identity = 432/435 (99.31%), Postives = 434/435 (99.77%), Query Frame = 0


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60
           MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNIS+PLLGFRNLSY
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180
           KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300
           QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300

Query: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360
           YRHVALYGDPNDRNPLSILDLPSDNLKNS KHQVDEMEDSHSAALCLASDVMNKRNPEFS
Sbjct: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360

Query: 361 DDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420
           DDESLEIGEEFADSCFSTSE+EFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK
Sbjct: 361 DDESLEIGEEFADSCFSTSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420

Query: 421 FEFHNQELPIHIKMT 436
           FEFHNQELPIHIKMT
Sbjct: 421 FEFHNQELPIHIKMT 435

[Close]

BLAST of Carg09812 vs. NCBI nr
Match: XP_023526219.1 (CRM-domain containing factor CFM2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 826.6 bits (2134), Expect = 9.8e-236
Identity = 424/435 (97.47%), Postives = 430/435 (98.85%), Query Frame = 0


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60
           MAKSLFHNLRRASLLFRSSSLNQPFFRPV GVPDSTFS IK FPLLNIS+PLLGFRNLSY
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVFGVPDSTFSHIKIFPLLNISKPLLGFRNLSY 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLK+QRKREKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKVQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180
           KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVP+VQGPVVEPHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPKVQGPVVEPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQV EYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVREYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300
           QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLE VRRFIAIAEKELELY
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLECVRRFIAIAEKELELY 300

Query: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360
           YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNK+NPEFS
Sbjct: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKQNPEFS 360

Query: 361 DDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420
           DDESLEIGEEFADSCFSTSE+EFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK
Sbjct: 361 DDESLEIGEEFADSCFSTSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420

Query: 421 FEFHNQELPIHIKMT 436
           FE+HNQELPIHIKMT
Sbjct: 421 FEYHNQELPIHIKMT 435

[Close]

BLAST of Carg09812 vs. NCBI nr
Match: KAG6580934.1 (putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 825.9 bits (2132), Expect = 1.7e-235
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 12  ASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSYGSVNLVISQGK 71
           ASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSYGSVNLVISQGK
Sbjct: 37  ASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSYGSVNLVISQGK 96

Query: 72  PKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQKFSNAEER 131
           PKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQKFSNAEER
Sbjct: 97  PKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQKFSNAEER 156

Query: 132 IKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGR 191
           IKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGR
Sbjct: 157 IKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGR 216

Query: 192 RGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFY 251
           RGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFY
Sbjct: 217 RGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFY 276

Query: 252 RGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 311
           RGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN
Sbjct: 277 RGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPN 336

Query: 312 DRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEF 371
           DRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEF
Sbjct: 337 DRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEF 396

Query: 372 ADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH 431
           ADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH
Sbjct: 397 ADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNKFEFHNQELPIH 456

Query: 432 IKMT 436
           IKMT
Sbjct: 457 IKMT 460

[Close]

BLAST of Carg09812 vs. NCBI nr
Match: XP_038903000.1 (CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida] >XP_038903001.1 CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida])

HSP 1 Score: 740.3 bits (1910), Expect = 9.2e-210
Identity = 381/430 (88.60%), Postives = 407/430 (94.65%), Query Frame = 0


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60
           MAKSLFHNLRRASLLFRSSSLNQP FRP+LGV D+ FS+I NF L NIS+PLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPSFRPILGVSDTIFSQINNFTLPNISKPLLGFRNLSH 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLVISQGKPKFETHEVDPPKKDKWKTK+KLKMQRKREKQKRKA NKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKRKLKMQRKREKQKRKAENKKDPRQLRVKGK 120

Query: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180
           KKQKFSNAEERIKHKLEKARIKEALL+ERLKRYEVPRVQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLVERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300
           QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300

Query: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360
           YRHVALYGDPNDRNPLSILD+PS+N   S KHQV++++DSHSAALCLAS+V N+RNP+F 
Sbjct: 301 YRHVALYGDPNDRNPLSILDIPSNNY--SHKHQVNKLDDSHSAALCLASEVTNQRNPDFW 360

Query: 361 DDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420
           DDESLE G+ F DSCFSTSE++FESD LDD + GRIE SFSQTGE+SS+TM+TCSA QNK
Sbjct: 361 DDESLETGDGFGDSCFSTSESDFESDKLDDSDDGRIEISFSQTGEISSSTMSTCSAFQNK 420

Query: 421 FEFHNQELPI 431
           FE H QELPI
Sbjct: 421 FESHKQELPI 428

[Close]

BLAST of Carg09812 vs. ExPASy Swiss-Prot
Match: Q67XL4 (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.2e-40
Identity = 100/204 (49.02%), Postives = 135/204 (66.18%), Query Frame = 0


Query: 98  KREKQKRKAANKKDPRQLRVKGKKKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPR 157
           KR+K K K A  +  +  R K KK+ +   +EE+I +KL KAR KE  L+E +K+ E   
Sbjct: 107 KRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSE 166

Query: 158 VQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCK 217
                 +P  LT EE FY  KMG K  NYVP+GRRG++ GVILNMH+HWKKH+T++V  K
Sbjct: 167 SAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIK 226

Query: 218 PCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEYVQP--EVMSPIDTLSKKRALE 277
              P +V E A E+ARL+GGI + +   +TII YRGK YVQP  E+MSP  TL +K+AL+
Sbjct: 227 TFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALD 286

Query: 278 KSKYEQSLESVRRFIAIAEKELEL 300
           KSK   +L +VR++I   E+EL+L
Sbjct: 287 KSKCRDALRAVRKYIPRLEQELQL 310

[Close]

BLAST of Carg09812 vs. ExPASy Swiss-Prot
Match: Q9LT57 (CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM9 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.7e-37
Identity = 105/285 (36.84%), Postives = 168/285 (58.95%), Query Frame = 0


Query: 89  TKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQKFSNAEERIKHKLEKARIKEALLIE 148
           T +   M+ K E + RK +  K  R++R   K K+K    EER+ + L++A+ K ALL++
Sbjct: 14  TSRGRSMRSKVESRMRKESG-KTLREIRRAKKLKKKLMTDEERLIYNLKRAKKKVALLLQ 73

Query: 149 RLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKK 208
           +LK+Y++P +  PV +P   T+E+    KK+G K  NYVP+G RGVFGGV+ NMHMHWK 
Sbjct: 74  KLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKF 133

Query: 209 HETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEYVQPEVMSPIDTL 268
           HETV+V C      ++ E A  IARLSGG+ I I    TII +RG+ Y QP+ + P++TL
Sbjct: 134 HETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLIPVNTL 193

Query: 269 SKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPLSILDLPSDNLKN 328
           +K++AL K+++EQ+LES +  I   E++L    R + +    N  +P+++  +    + +
Sbjct: 194 TKRKALFKARFEQALESQKLNIKKTEQQL----RRMGV----NPEDPVAMASI--HRVAS 253

Query: 329 SQKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFAD 374
           +  + +D+ E           D  ++R     + E  E G+E +D
Sbjct: 254 TFFNAIDKKE---GTPYVFHGDKQSERGTSVDNREESEPGDEDSD 284

[Close]

BLAST of Carg09812 vs. ExPASy Swiss-Prot
Match: Q8L7C2 (CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CFM2 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.3e-16
Identity = 90/364 (24.73%), Postives = 174/364 (47.80%), Query Frame = 0


Query: 88  KTKKKLKMQRKREKQKRKAANKKDPRQL-RVKGKKKQKFSNAEERIKHKLEKARIKEA-- 147
           + ++++K +  +E  + +A ++KD  Q  ++K +++       E+   KL  A  K+A  
Sbjct: 497 ENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSMALEKKANA 556

Query: 148 -LLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMH 207
             ++  L+  E P++    ++   +T +E++ ++K+G K   ++ +GRRGVF G I NMH
Sbjct: 557 EKVLADLENRESPQLSD--IDKEGITNDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMH 616

Query: 208 MHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI---QIIGDDTIIFYRGKEYVQPE 267
           +HWK  E VK+ C        H+ A+ +   SGGI +    +     II YRGK Y +P+
Sbjct: 617 LHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQ 676

Query: 268 VMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPND-----RNP 327
            + P   LSK+ AL++S   Q  +S++  +      +E   R +      N+      + 
Sbjct: 677 CLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVEDSATNETWSDGESS 736

Query: 328 LSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFADSC 387
             +++  ++N     +   +++E  +S+ L + S          S +E+ E   E     
Sbjct: 737 NMMVEEETENQHTEPEKAREKIELGYSSDLSVPS----------SGEENWEDDSEGEVDP 796

Query: 388 FSTSEAEFESDILDDFEHGRIEGS----------FSQTGEMSSTTMNTCSASQNKFEFHN 430
            +TS  E++ D  +     R EG+          F++TG  ++++ +  S   N F   N
Sbjct: 797 LTTSSQEYQEDESESASSQRHEGNSLDSTANLSVFAETGSANASSFHDRSLPHNSFLNAN 848

[Close]

BLAST of Carg09812 vs. ExPASy Swiss-Prot
Match: F4J2U9 (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM3A PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.1e-15
Identity = 75/274 (27.37%), Postives = 130/274 (47.45%), Query Frame = 0


Query: 120 KKKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKM 179
           K ++K + AE ++  K E+   K  + ++  ++ E         +P ++T EERF  +K+
Sbjct: 600 KLERKLAFAERKLL-KAERGLAKVEVCLKPAEQRE---------DPESITDEERFMFRKL 659

Query: 180 GQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIP 239
           G K   ++ +GRRGVF G + NMH+HWK  E VK+  K      V + A  +   SGGI 
Sbjct: 660 GLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGVKKVALALEAESGGIL 719

Query: 240 I---QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAE-- 299
           +   ++     II YRG++Y +P ++ P + L+K++AL +S   Q  E + + I+  +  
Sbjct: 720 VSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKALARSIELQRREGLLKHISTMQAK 779

Query: 300 -KELELYYRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMN 359
            K+L      +    D  D    + LD+       S   + DE +D  +           
Sbjct: 780 AKQLRAEIEQMEKVTDKGDEELYNKLDM----AYASSDEETDEEDDDDAF---------- 839

Query: 360 KRNPE-FSDDESLEIGEEFADSCFSTSEAEFESD 387
              PE +++ E  E GE  A     T + + +S+
Sbjct: 840 ---PETYAEGEDGEEGEILAGELSETEDKDLDSN 846

[Close]

BLAST of Carg09812 vs. ExPASy Swiss-Prot
Match: F4JVH1 (CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CFM3B PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.8e-13
Identity = 91/321 (28.35%), Postives = 150/321 (46.73%), Query Frame = 0


Query: 88  KTKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQKFSNAEERIKHKLEKARIKEALLI 147
           K  K L      E+ K++    +  + +R   K ++K + AE+    KL KA    A + 
Sbjct: 598 KWGKNLDNDDHVEEMKQEVEKVRSAKLVR---KLERKLAFAEK----KLLKAERALAKVE 657

Query: 148 ERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWK 207
           E LK    P  Q   +E   +T EERF  +K+G K   ++ +GRRGVF G + NMH+HWK
Sbjct: 658 ESLK----PAEQRTDLE--GITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWK 717

Query: 208 KHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI---QIIGDDTIIFYRGKEYVQPEVMSP 267
             E +K+  K        + A  +   SGGI +   +I     +I YRGK+Y +P  + P
Sbjct: 718 YRELIKILVKAKTLEGAQKVAMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRP 777

Query: 268 IDTLSKKRALEKSKYEQSLESVRRFIAIAE---KELELYYRHVALYGDPNDRNPLSILDL 327
            + L+K++AL +S   Q  E++ + I   +   ++L      V L  D  D      LD+
Sbjct: 778 KNLLTKRKALARSLELQKREALIKHIEAIQTRSEQLRAEIEQVELVKDKGDETLYDKLDM 837

Query: 328 PSDNLKNSQKHQ-----------VDEMEDSHSAALCLASDVMNKRNPEFSDDES-LEIGE 387
              + + +++              DE ED     +  A+  +++ + EF  DES  + G+
Sbjct: 838 AYSSDEETEETDGEEDDVYLDTYEDEGEDDEEGGI-QANGSLSETDVEFGSDESDTDFGD 897

Query: 388 EFADSCF-STSEAEFESDILD 390
             A S    T+  E +++ LD
Sbjct: 898 NSASSTTPETTFVELQNEELD 904

[Close]

BLAST of Carg09812 vs. ExPASy TrEMBL
Match: A0A6J1F621 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442450 PE=4 SV=1)

HSP 1 Score: 841.3 bits (2172), Expect = 1.9e-240
Identity = 432/435 (99.31%), Postives = 434/435 (99.77%), Query Frame = 0


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60
           MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNIS+PLLGFRNLSY
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180
           KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300
           QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300

Query: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360
           YRHVALYGDPNDRNPLSILDLPSDNLKNS KHQVDEMEDSHSAALCLASDVMNKRNPEFS
Sbjct: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSLKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360

Query: 361 DDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420
           DDESLEIGEEFADSCFSTSE+EFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK
Sbjct: 361 DDESLEIGEEFADSCFSTSESEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420

Query: 421 FEFHNQELPIHIKMT 436
           FEFHNQELPIHIKMT
Sbjct: 421 FEFHNQELPIHIKMT 435

[Close]

BLAST of Carg09812 vs. ExPASy TrEMBL
Match: A0A5A7UFD6 (CRM-domain containing factor CFM3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007520 PE=4 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 7.1e-208
Identity = 374/431 (86.77%), Postives = 403/431 (93.50%), Query Frame = 0


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60
           MAKSLFHNLRRASLLFRSSSLNQ  FRP+L +PD+ FS+IKNFP  NIS+PLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQLSFRPILVIPDTVFSQIKNFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLV++QGKPKFETH VDPPKK+KWKTKKKLKMQR R KQKRKAANK+DPRQLRVKGK
Sbjct: 61  GSVNLVVTQGKPKFETHVVDPPKKEKWKTKKKLKMQRMRSKQKRKAANKRDPRQLRVKGK 120

Query: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180
           KKQKF NA ERIK+KLE+ARIKEALLIERLKRYEVP VQGP+V+PHNLTAEERFY+KKMG
Sbjct: 121 KKQKFPNAAERIKNKLERARIKEALLIERLKRYEVPEVQGPIVKPHNLTAEERFYIKKMG 180

Query: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300
           QIIGDDTIIFYRGKEYVQPEVMSPI TLSKKRALEKSKYEQSLESVRRFIAIAEKELELY
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIGTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300

Query: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360
           YRH+ALYGDPNDRNPLSIL++PSDNLKNS KHQ+  MEDSHSAALCL SDVMN+RNP+FS
Sbjct: 301 YRHIALYGDPNDRNPLSILNVPSDNLKNSDKHQITNMEDSHSAALCLESDVMNQRNPDFS 360

Query: 361 DDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420
           DDESL+IG+EF D+CFSTSE++FESD LD+ + GRIE S SQT EM STTMNTCSA QNK
Sbjct: 361 DDESLDIGDEFGDACFSTSESDFESDKLDESDDGRIEVSVSQTEEMFSTTMNTCSAFQNK 420

Query: 421 FEFHNQELPIH 432
            EFH QELPIH
Sbjct: 421 CEFHKQELPIH 431

[Close]

BLAST of Carg09812 vs. ExPASy TrEMBL
Match: A0A1S3B7C2 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486957 PE=4 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 7.1e-208
Identity = 374/431 (86.77%), Postives = 403/431 (93.50%), Query Frame = 0


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60
           MAKSLFHNLRRASLLFRSSSLNQ  FRP+L +PD+ FS+IKNFP  NIS+PLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQLSFRPILVIPDTVFSQIKNFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLV++QGKPKFETH VDPPKK+KWKTKKKLKMQR R KQKRKAANK+DPRQLRVKGK
Sbjct: 61  GSVNLVVTQGKPKFETHVVDPPKKEKWKTKKKLKMQRMRSKQKRKAANKRDPRQLRVKGK 120

Query: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180
           KKQKF NA ERIK+KLE+ARIKEALLIERLKRYEVP VQGP+V+PHNLTAEERFY+KKMG
Sbjct: 121 KKQKFPNAAERIKNKLERARIKEALLIERLKRYEVPEVQGPIVKPHNLTAEERFYIKKMG 180

Query: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300
           QIIGDDTIIFYRGKEYVQPEVMSPI TLSKKRALEKSKYEQSLESVRRFIAIAEKELELY
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIGTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300

Query: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360
           YRH+ALYGDPNDRNPLSIL++PSDNLKNS KHQ+  MEDSHSAALCL SDVMN+RNP+FS
Sbjct: 301 YRHIALYGDPNDRNPLSILNVPSDNLKNSDKHQITNMEDSHSAALCLESDVMNQRNPDFS 360

Query: 361 DDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420
           DDESL+IG+EF D+CFSTSE++FESD LD+ + GRIE S SQT EM STTMNTCSA QNK
Sbjct: 361 DDESLDIGDEFGDACFSTSESDFESDKLDESDDGRIEVSVSQTEEMFSTTMNTCSAFQNK 420

Query: 421 FEFHNQELPIH 432
            EFH QELPIH
Sbjct: 421 CEFHKQELPIH 431

[Close]

BLAST of Carg09812 vs. ExPASy TrEMBL
Match: A0A6J1J3F1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482313 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.5e-202
Identity = 367/378 (97.09%), Postives = 370/378 (97.88%), Query Frame = 0


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60
           MAKSLFHNLRRASLLFRS SL QPFFRPVLGVPDSTFS IKN PLLNIS+P LGFRNLSY
Sbjct: 1   MAKSLFHNLRRASLLFRSLSLKQPFFRPVLGVPDSTFSHIKNIPLLNISKPFLGFRNLSY 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQR REKQKRKAANKKDPRQLRVKGK
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 120

Query: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180
           KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVP+VQGPVVEPHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPKVQGPVVEPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300
           QIIGDDTIIFYRGKEYVQP VMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY
Sbjct: 241 QIIGDDTIIFYRGKEYVQPVVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300

Query: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360
           YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSA+LCLASDVMNKRNPEFS
Sbjct: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSASLCLASDVMNKRNPEFS 360

Query: 361 DDESLEIGEEFADSCFST 379
           DDESLEIGEE ADSCFST
Sbjct: 361 DDESLEIGEELADSCFST 378

[Close]

BLAST of Carg09812 vs. ExPASy TrEMBL
Match: A0A0A0LF61 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G823620 PE=4 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.4e-190
Identity = 350/431 (81.21%), Postives = 382/431 (88.63%), Query Frame = 0


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60
           MAKSLFHNLRRA LLFRSSSLNQ  FRP+L +PD+ FS+IK FP  NIS+PLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRAPLLFRSSSLNQLSFRPILEIPDTVFSQIKKFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           GSVNLV+SQGKPKFETHEVDPPKK+KWKTKKKLKMQR R KQKRKAANK+DPRQLR    
Sbjct: 61  GSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMRLKQKRKAANKRDPRQLR---- 120

Query: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180
                             ARIKEALLIERL+RYEVP+VQGP+V+PH+LT EERFY+KKMG
Sbjct: 121 ------------------ARIKEALLIERLRRYEVPKVQGPMVKPHDLTGEERFYIKKMG 180

Query: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300
           QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY
Sbjct: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300

Query: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360
           YRH+ALYGDPNDRNPLSIL++PSDNL NS K+Q+  MEDSHSAALCLASDVMN+RNP+FS
Sbjct: 301 YRHIALYGDPNDRNPLSILNVPSDNL-NSDKYQITNMEDSHSAALCLASDVMNQRNPDFS 360

Query: 361 DDESLEIGEEFADSCFSTSEAEFESDILDDFEHGRIEGSFSQTGEMSSTTMNTCSASQNK 420
           DDESL+IG+ FAD+CFSTSE++FESD LD+   GR+E S SQT E+SSTTMNTCSA  NK
Sbjct: 361 DDESLDIGDGFADACFSTSESDFESDKLDESGEGRMEVSVSQTEEISSTTMNTCSAFPNK 408

Query: 421 FEFHNQELPIH 432
            EFH QELPIH
Sbjct: 421 CEFHKQELPIH 408

[Close]

BLAST of Carg09812 vs. TAIR 10
Match: AT2G28480.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 423.7 bits (1088), Expect = 1.8e-118
Identity = 242/386 (62.69%), Postives = 285/386 (73.83%), Query Frame = 0


Query: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60
           MA +    LR+AS   RSS    P       +P S          +  +RP+    +  Y
Sbjct: 1   MAIAFARGLRKASSFLRSS---YPLLISSRLLPISQEFYDSTLTFVLPTRPICRNFSHGY 60

Query: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120
           G+VNLVIS+GKPKFET E+DPPKK KW TKK+LK++RK+E+++R AAN+KDPR+L VKGK
Sbjct: 61  GTVNLVISEGKPKFETRELDPPKKYKWLTKKRLKLKRKKEREERNAANRKDPRRLTVKGK 120

Query: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180
           KK KF NAEERIK+KLEKA+IKEALLIERLKRYEV +VQGP V PH +T EERFY+KKMG
Sbjct: 121 KK-KFVNAEERIKYKLEKAKIKEALLIERLKRYEVAKVQGPEVRPHEITGEERFYLKKMG 180

Query: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRGVFGGVILNMH+HWKKHETVKV C   KPGQV +YA+E+A+LSGG+P+
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPV 240

Query: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKELELY 300
            IIGDDTIIFYRGK YVQP+VMSPIDTLSKKRA EKSKYEQSLESVR FIAIAEKELELY
Sbjct: 241 NIIGDDTIIFYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHFIAIAEKELELY 300

Query: 301 YRHVALYGDPNDRNPLSILDLPSDNLKNSQKHQVDEMEDSHSAALCLASDVMNKRNPEFS 360
           YRHVALY DPN+RNPLSILD   D+   S++H  +E            SD  +    E  
Sbjct: 301 YRHVALYDDPNNRNPLSILD---DSPSESRQHHENEF-------FLSCSDTDSSSEDEDE 360

Query: 361 DDESLEIGEEFADSCFSTSEAEFESD 387
           D+E  E+ +  + S  S  E   ES+
Sbjct: 361 DEELCEL-DNGSSSSSSAKEELSESE 371

[Close]

BLAST of Carg09812 vs. TAIR 10
Match: AT4G13070.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 234.6 bits (597), Expect = 1.5e-61
Identity = 132/262 (50.38%), Postives = 177/262 (67.56%), Query Frame = 0


Query: 52  LLGFRNLSYGSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKD 111
           L   R LS  ++ L       +F  + V     +   T+K+ K +R +  +K K     +
Sbjct: 69  LFSRRYLSNSTIELRTDDNVVRFAFNNVSSSGNNVVPTRKEKKWKRAKLSRKAKV---NE 128

Query: 112 PRQLRVKGKKKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAE 171
            R  R+K KKK    N E RI++KLEKA+ KE  LIE+L++Y+VP+      +P +LT E
Sbjct: 129 LRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEE 188

Query: 172 ERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPC-KPGQVHEYAQE 231
           E+ Y+K+ G+KR N+V +GRRGVFGGV+LN+H+HWKKHETVKV CKPC KPGQVHEYA+E
Sbjct: 189 EQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEE 248

Query: 232 IARLSGGIPIQIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFI 291
           +ARLS GI I +  ++TI+ YRGK YV+PEVMSP+DTLSK +ALEK +YEQSLE    FI
Sbjct: 249 LARLSKGIVIDVKPNNTIVLYRGKNYVRPEVMSPVDTLSKDKALEKYRYEQSLEHTSEFI 308

Query: 292 AIAEKELELYYRHVALYGDPND 313
              EKELE Y+++VA +    D
Sbjct: 309 EKLEKELEEYHKYVARHKKKKD 327

[Close]

BLAST of Carg09812 vs. TAIR 10
Match: AT3G25440.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-41
Identity = 100/204 (49.02%), Postives = 135/204 (66.18%), Query Frame = 0


Query: 98  KREKQKRKAANKKDPRQLRVKGKKKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPR 157
           KR+K K K A  +  +  R K KK+ +   +EE+I +KL KAR KE  L+E +K+ E   
Sbjct: 107 KRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSE 166

Query: 158 VQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCK 217
                 +P  LT EE FY  KMG K  NYVP+GRRG++ GVILNMH+HWKKH+T++V  K
Sbjct: 167 SAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIK 226

Query: 218 PCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEYVQP--EVMSPIDTLSKKRALE 277
              P +V E A E+ARL+GGI + +   +TII YRGK YVQP  E+MSP  TL +K+AL+
Sbjct: 227 TFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALD 286

Query: 278 KSKYEQSLESVRRFIAIAEKELEL 300
           KSK   +L +VR++I   E+EL+L
Sbjct: 287 KSKCRDALRAVRKYIPRLEQELQL 310

[Close]

BLAST of Carg09812 vs. TAIR 10
Match: AT3G25440.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-41
Identity = 100/204 (49.02%), Postives = 135/204 (66.18%), Query Frame = 0


Query: 98  KREKQKRKAANKKDPRQLRVKGKKKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPR 157
           KR+K K K A  +  +  R K KK+ +   +EE+I +KL KAR KE  L+E +K+ E   
Sbjct: 43  KRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEEKILNKLRKARKKEERLMETMKKLEPSE 102

Query: 158 VQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCK 217
                 +P  LT EE FY  KMG K  NYVP+GRRG++ GVILNMH+HWKKH+T++V  K
Sbjct: 103 SAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTLQVVIK 162

Query: 218 PCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEYVQP--EVMSPIDTLSKKRALE 277
              P +V E A E+ARL+GGI + +   +TII YRGK YVQP  E+MSP  TL +K+AL+
Sbjct: 163 TFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALD 222

Query: 278 KSKYEQSLESVRRFIAIAEKELEL 300
           KSK   +L +VR++I   E+EL+L
Sbjct: 223 KSKCRDALRAVRKYIPRLEQELQL 246

[Close]

BLAST of Carg09812 vs. TAIR 10
Match: AT3G27550.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 156.8 bits (395), Expect = 4.1e-38
Identity = 105/285 (36.84%), Postives = 168/285 (58.95%), Query Frame = 0


Query: 89  TKKKLKMQRKREKQKRKAANKKDPRQLRVKGKKKQKFSNAEERIKHKLEKARIKEALLIE 148
           T +   M+ K E + RK +  K  R++R   K K+K    EER+ + L++A+ K ALL++
Sbjct: 14  TSRGRSMRSKVESRMRKESG-KTLREIRRAKKLKKKLMTDEERLIYNLKRAKKKVALLLQ 73

Query: 149 RLKRYEVPRVQGPVVEPHNLTAEERFYMKKMGQKRSNYVPIGRRGVFGGVILNMHMHWKK 208
           +LK+Y++P +  PV +P   T+E+    KK+G K  NYVP+G RGVFGGV+ NMHMHWK 
Sbjct: 74  KLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKF 133

Query: 209 HETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKEYVQPEVMSPIDTL 268
           HETV+V C      ++ E A  IARLSGG+ I I    TII +RG+ Y QP+ + P++TL
Sbjct: 134 HETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLIPVNTL 193

Query: 269 SKKRALEKSKYEQSLESVRRFIAIAEKELELYYRHVALYGDPNDRNPLSILDLPSDNLKN 328
           +K++AL K+++EQ+LES +  I   E++L    R + +    N  +P+++  +    + +
Sbjct: 194 TKRKALFKARFEQALESQKLNIKKTEQQL----RRMGV----NPEDPVAMASI--HRVAS 253

Query: 329 SQKHQVDEMEDSHSAALCLASDVMNKRNPEFSDDESLEIGEEFAD 374
           +  + +D+ E           D  ++R     + E  E G+E +D
Sbjct: 254 TFFNAIDKKE---GTPYVFHGDKQSERGTSVDNREESEPGDEDSD 284

The following BLAST results are available for this feature:

BLAST of Carg09812 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017679.1	1.2e-241	100.00	putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyro...	[more]
XP_022935659.1	3.8e-240	99.31	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]
XP_023526219.1	9.8e-236	97.47	CRM-domain containing factor CFM2, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6580934.1	1.7e-235	100.00	putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyro...	[more]
XP_038903000.1	9.2e-210	88.60	CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida] >XP_0389030...	[more]

BLAST of Carg09812 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67XL4	3.2e-40	49.02	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid...	[more]
Q9LT57	5.7e-37	36.84	CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q8L7C2	3.3e-16	24.73	CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
F4J2U9	2.1e-15	27.37	CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]
F4JVH1	5.8e-13	28.35	CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Carg09812 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F621	1.9e-240	99.31	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb...	[more]
A0A5A7UFD6	7.1e-208	86.77	CRM-domain containing factor CFM3 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B7C2	7.1e-208	86.77	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Cucumis melo O...	[more]
A0A6J1J3F1	4.5e-202	97.09	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb...	[more]
A0A0A0LF61	1.4e-190	81.21	CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G823620 PE=4 SV...	[more]

BLAST of Carg09812 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28480.1	1.8e-118	62.69	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT4G13070.1	1.5e-61	50.38	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.1	2.3e-41	49.02	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.2	2.3e-41	49.02	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G27550.1	4.1e-38	36.84	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..121
None	No IPR available	PANTHER	PTHR31426:SF2	GROUP II INTRON SPLICING FACTOR CRS1-LIKE	coord: 1..389
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 168..252 e-value: 4.3E-25 score: 99.4
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 168..252 e-value: 1.3E-17 score: 63.7
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 166..263 score: 18.727924
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 167..267 e-value: 3.0E-22 score: 80.5
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 167..262
IPR040286	CRM domain-containing protein At3g25440-like	PANTHER	PTHR31426	GROUP II INTRON SPLICING FACTOR CRS1-LIKE	coord: 1..389

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09812-RA	Carg09812-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding