Carg09620 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg09620
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr14: 3829562 .. 3830884 (-)
RNA-Seq ExpressionCarg09620
SyntenyCarg09620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCCATGTCTTTCATCTACGCATGACGTTTTTGCGACCACGAATTTACTCCTGAGCTCAAGAGGTAACATCGGAGCGAAGAAGGCTCTCTTCTTACTTCAGAACTGCAAGAACTTCAAACAACTCAAGCAAATCCATGCCAAGATAATTCGTAGTGGCATTTCTAACGATCAATTACTTACTAGGAAACTGATTCATCTCTACTCCTCCCATGGAAAAATAGCGTATGCGATTTTTCTATTTCATCAAATTCAGAATCCTTGCACGTTTACTTGGAATCTGATAATCAGAGCCAACACTATCAACGGCCTCTCTGAACAAGCCCTAATGTTGTACAAGAACATGGTATGTCAAGGAATAGCAGCCGATAAGTTTACATTTCCATTTGTCATCAAAGCTTGTACGACTTCCTTCGCCATTGACATTGGAAGAGTGATTCATGCGTCTTTAATCAAATACGGATTTTCAGGGGATACATTTGTGCAGAACAATCTGATTGATTTTTACTTCAAGTGTGGACATAAACGTTGTGCACTGAAGGTGTTCGAGAAAATGCGTGTTTGCAATGTGGTGTCATGGACGACCATGATATCAGGGCTGGTCTCTTGTGGTGATGTACAGGCAGCGAGAAGGATTTTCGATGAGATGCCATGTAAAAACGTTGTTTCATGGACAGCAATGATCAATGGATATATTAGAAATCAAAATCCTGAAGAAGCTCTTGAGCTATTCAAGAGAATGCAGGCTGAGAACATTTGCCCAAATGAGTATACGATGGTGAGCTTGATCAAAGCATGTACTGAAATGGGAATCCTAAGTCTTGGTCGAGGGATTCATGACTATGCCATCAACAATGGTTTCGAAATCGGTGTTTATCTCGGGACAGCTCTGATTGACATGTACAGCAAATGTGGTAGTATAAAGGACGCGATAGAAGTGTTCAAGACAATGCCCGGAAAAAGCTTGCCGACATGGAACTCGATGATCACTAGCTTAGGGGTACATGGATTGGGGCAGGAAGCTCTCAATCTTTTCAGTGAGATGGAAAGGGTAAATGTGAAGCCTGATGCTATCACTTTCGTGGGCGTTTTATGCGCTTGTGTACATATGAAGAATGTAGAGGCAGGCTGTGCTTACTTCAAACGAATGGCACAACATTATGGTATTGCACCAATTCCTGAGCATTACAAGTGCATGGCTGAGCTATATGCTCGGGACGAAGCCTTCGAATCAACAAAAGCGATGTCAATGGAACCCGATTCGGGTTCCTTGGCTTTACTCGGGGTGATCGAGAACGCCGATGGTACTGACAAGGAGTAG

mRNA sequence

ATGGTTCCATGTCTTTCATCTACGCATGACGTTTTTGCGACCACGAATTTACTCCTGAGCTCAAGAGGTAACATCGGAGCGAAGAAGGCTCTCTTCTTACTTCAGAACTGCAAGAACTTCAAACAACTCAAGCAAATCCATGCCAAGATAATTCGTAGTGGCATTTCTAACGATCAATTACTTACTAGGAAACTGATTCATCTCTACTCCTCCCATGGAAAAATAGCGTATGCGATTTTTCTATTTCATCAAATTCAGAATCCTTGCACGTTTACTTGGAATCTGATAATCAGAGCCAACACTATCAACGGCCTCTCTGAACAAGCCCTAATGTTGTACAAGAACATGGTATGTCAAGGAATAGCAGCCGATAAGTTTACATTTCCATTTGTCATCAAAGCTTGTACGACTTCCTTCGCCATTGACATTGGAAGAGTGATTCATGCGTCTTTAATCAAATACGGATTTTCAGGGGATACATTTGTGCAGAACAATCTGATTGATTTTTACTTCAAGTGTGGACATAAACGTTGTGCACTGAAGGTGTTCGAGAAAATGCGTGTTTGCAATGTGGTGTCATGGACGACCATGATATCAGGGCTGGTCTCTTGTGGTGATGTACAGGCAGCGAGAAGGATTTTCGATGAGATGCCATGTAAAAACGTTGTTTCATGGACAGCAATGATCAATGGATATATTAGAAATCAAAATCCTGAAGAAGCTCTTGAGCTATTCAAGAGAATGCAGGCTGAGAACATTTGCCCAAATGAGTATACGATGGTGAGCTTGATCAAAGCATGTACTGAAATGGGAATCCTAAGTCTTGGTCGAGGGATTCATGACTATGCCATCAACAATGGTTTCGAAATCGGTGTTTATCTCGGGACAGCTCTGATTGACATGTACAGCAAATGTGGTAGTATAAAGGACGCGATAGAAGTGTTCAAGACAATGCCCGGAAAAAGCTTGCCGACATGGAACTCGATGATCACTAGCTTAGGGGTACATGGATTGGGGCAGGAAGCTCTCAATCTTTTCAGTGAGATGGAAAGGGTAAATGTGAAGCCTGATGCTATCACTTTCGTGGGCGTTTTATGCGCTTGTGTACATATGAAGAATGTAGAGGCAGGCTGTGCTTACTTCAAACGAATGGCACAACATTATGGTATTGCACCAATTCCTGAGCATTACAAGTGCATGGCTGAGCTATATGCTCGGGACGAAGCCTTCGAATCAACAAAAGCGATGTCAATGGAACCCGATTCGGGTTCCTTGGCTTTACTCGGGGTGATCGAGAACGCCGATGGTACTGACAAGGAGTAG

Coding sequence (CDS)

ATGGTTCCATGTCTTTCATCTACGCATGACGTTTTTGCGACCACGAATTTACTCCTGAGCTCAAGAGGTAACATCGGAGCGAAGAAGGCTCTCTTCTTACTTCAGAACTGCAAGAACTTCAAACAACTCAAGCAAATCCATGCCAAGATAATTCGTAGTGGCATTTCTAACGATCAATTACTTACTAGGAAACTGATTCATCTCTACTCCTCCCATGGAAAAATAGCGTATGCGATTTTTCTATTTCATCAAATTCAGAATCCTTGCACGTTTACTTGGAATCTGATAATCAGAGCCAACACTATCAACGGCCTCTCTGAACAAGCCCTAATGTTGTACAAGAACATGGTATGTCAAGGAATAGCAGCCGATAAGTTTACATTTCCATTTGTCATCAAAGCTTGTACGACTTCCTTCGCCATTGACATTGGAAGAGTGATTCATGCGTCTTTAATCAAATACGGATTTTCAGGGGATACATTTGTGCAGAACAATCTGATTGATTTTTACTTCAAGTGTGGACATAAACGTTGTGCACTGAAGGTGTTCGAGAAAATGCGTGTTTGCAATGTGGTGTCATGGACGACCATGATATCAGGGCTGGTCTCTTGTGGTGATGTACAGGCAGCGAGAAGGATTTTCGATGAGATGCCATGTAAAAACGTTGTTTCATGGACAGCAATGATCAATGGATATATTAGAAATCAAAATCCTGAAGAAGCTCTTGAGCTATTCAAGAGAATGCAGGCTGAGAACATTTGCCCAAATGAGTATACGATGGTGAGCTTGATCAAAGCATGTACTGAAATGGGAATCCTAAGTCTTGGTCGAGGGATTCATGACTATGCCATCAACAATGGTTTCGAAATCGGTGTTTATCTCGGGACAGCTCTGATTGACATGTACAGCAAATGTGGTAGTATAAAGGACGCGATAGAAGTGTTCAAGACAATGCCCGGAAAAAGCTTGCCGACATGGAACTCGATGATCACTAGCTTAGGGGTACATGGATTGGGGCAGGAAGCTCTCAATCTTTTCAGTGAGATGGAAAGGGTAAATGTGAAGCCTGATGCTATCACTTTCGTGGGCGTTTTATGCGCTTGTGTACATATGAAGAATGTAGAGGCAGGCTGTGCTTACTTCAAACGAATGGCACAACATTATGGTATTGCACCAATTCCTGAGCATTACAAGTGCATGGCTGAGCTATATGCTCGGGACGAAGCCTTCGAATCAACAAAAGCGATGTCAATGGAACCCGATTCGGGTTCCTTGGCTTTACTCGGGGTGATCGAGAACGCCGATGGTACTGACAAGGAGTAG

Protein sequence

MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEPDSGSLALLGVIENADGTDKE
Homology
BLAST of Carg09620 vs. NCBI nr
Match: KAG7017868.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 897.5 bits (2318), Expect = 4.6e-257
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0

Query: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
           MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL
Sbjct: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60

Query: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
           LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
           IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180

Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
           KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240

Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
           ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300

Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
           MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360

Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
           FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420

Query: 421 DSGSLALLGVIENADGTDKE 441
           DSGSLALLGVIENADGTDKE
Sbjct: 421 DSGSLALLGVIENADGTDKE 440

BLAST of Carg09620 vs. NCBI nr
Match: KAG6581136.1 (Sialyltransferase-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 897.5 bits (2318), Expect = 4.6e-257
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0

Query: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
           MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL
Sbjct: 541 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 600

Query: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
           LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 601 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 660

Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
           IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 661 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 720

Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
           KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 721 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 780

Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
           ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 781 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 840

Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
           MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 841 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 900

Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
           FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP
Sbjct: 901 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 960

Query: 421 DSGSLALLGVIENADGTDKE 441
           DSGSLALLGVIENADGTDKE
Sbjct: 961 DSGSLALLGVIENADGTDKE 980

BLAST of Carg09620 vs. NCBI nr
Match: XP_022934150.1 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 891.3 bits (2302), Expect = 3.3e-255
Identity = 436/440 (99.09%), Postives = 439/440 (99.77%), Query Frame = 0

Query: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
           MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQL+QIHAKIIRS ISNDQL
Sbjct: 17  MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLRQIHAKIIRSAISNDQL 76

Query: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
           LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 77  LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 136

Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
           IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 137 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 196

Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
           KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 197 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 256

Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
           ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 257 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 316

Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
           MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 317 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 376

Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
           FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAFESTKAMSMEP
Sbjct: 377 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAFESTKAMSMEP 436

Query: 421 DSGSLALLGVIENADGTDKE 441
           DSGSLALLGVIENADGTDKE
Sbjct: 437 DSGSLALLGVIENADGTDKE 456

BLAST of Carg09620 vs. NCBI nr
Match: XP_022934151.1 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 891.3 bits (2302), Expect = 3.3e-255
Identity = 436/440 (99.09%), Postives = 439/440 (99.77%), Query Frame = 0

Query: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
           MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQL+QIHAKIIRS ISNDQL
Sbjct: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLRQIHAKIIRSAISNDQL 60

Query: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
           LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61  LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
           IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180

Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
           KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240

Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
           ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300

Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
           MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360

Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
           FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAFESTKAMSMEP
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAFESTKAMSMEP 420

Query: 421 DSGSLALLGVIENADGTDKE 441
           DSGSLALLGVIENADGTDKE
Sbjct: 421 DSGSLALLGVIENADGTDKE 440

BLAST of Carg09620 vs. NCBI nr
Match: XP_023527079.1 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 891.0 bits (2301), Expect = 4.3e-255
Identity = 436/440 (99.09%), Postives = 438/440 (99.55%), Query Frame = 0

Query: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
           MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFK L+QIHAKIIRS ISNDQL
Sbjct: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAISNDQL 60

Query: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
           LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61  LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
           IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180

Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
           KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240

Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
           ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300

Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
           MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360

Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
           FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420

Query: 421 DSGSLALLGVIENADGTDKE 441
           DSGSLALLGVIENADGTDKE
Sbjct: 421 DSGSLALLGVIENADGTDKE 440

BLAST of Carg09620 vs. ExPASy Swiss-Prot
Match: Q38959 (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A6 PE=2 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 9.3e-120
Identity = 214/402 (53.23%), Postives = 286/402 (71.14%), Query Frame = 0

Query: 29  KALFLLQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLYSSHGKIAYAIFLFHQIQNP 88
           +A + L+ C NF QLKQIH KII+  ++NDQLL R+LI + SS G+  YA  +F+Q+Q+P
Sbjct: 22  EASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81

Query: 89  CTFTWNLIIRANTINGLSEQALMLY-KNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVI 148
            TFTWNL+IR+ ++N    +AL+L+   M+      DKFTFPFVIKAC  S +I +G  +
Sbjct: 82  STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141

Query: 149 HASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDV 208
           H   IK GF  D F QN L+D YFKCG      KVF+KM   ++VSWTTM+ GLVS   +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201

Query: 209 QAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKAC 268
            +A  +F++MP +NVVSWTAMI  Y++N+ P+EA +LF+RMQ +++ PNE+T+V+L++A 
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261

Query: 269 TEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWN 328
           T++G LS+GR +HDYA  NGF +  +LGTALIDMYSKCGS++DA +VF  M GKSL TWN
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321

Query: 329 SMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQ 388
           SMITSLGVHG G+EAL+LF EM E  +V+PDAITFVGVL AC +  NV+ G  YF RM Q
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381

Query: 389 HYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGS 425
            YGI+PI EH  CM +L  +    ++A    ++M  +PD  S
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNS 423

BLAST of Carg09620 vs. ExPASy Swiss-Prot
Match: Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 9.8e-77
Identity = 158/458 (34.50%), Postives = 237/458 (51.75%), Query Frame = 0

Query: 34  LQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTW 93
           L  C N  Q+KQ+HA+IIR  +  D  +  KLI   S   +   A+ +F+Q+Q P     
Sbjct: 26  LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85

Query: 94  NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIK 153
           N +IRA+  N    QA  ++  M   G+ AD FT+PF++KAC+    + + +++H  + K
Sbjct: 86  NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145

Query: 154 YGFSGDTFVQNNLIDFYFKCG--HKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAAR 213
            G S D +V N LID Y +CG    R A+K+FEKM   + VSW +M+ GLV  G+++ AR
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205

Query: 214 RIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICP---------------- 273
           R+FDEMP ++++SW  M++GY R +   +A ELF++M   N                   
Sbjct: 206 RLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265

Query: 274 ------------------------------------------------NEYTMVSLIKAC 333
                                                           +   ++S++ AC
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325

Query: 334 TEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWN 393
           TE G+LSLG  IH     +      Y+  AL+DMY+KCG++K A +VF  +P K L +WN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385

Query: 394 SMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQH 422
           +M+  LGVHG G+EA+ LFS M R  ++PD +TF+ VLC+C H   ++ G  YF  M + 
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445

BLAST of Carg09620 vs. ExPASy Swiss-Prot
Match: Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 2.2e-76
Identity = 150/412 (36.41%), Postives = 237/412 (57.52%), Query Frame = 0

Query: 19  LSSRGNIGAKKALFLLQ-NCKNFKQLKQIHAKIIRSGISNDQL-LTRKLIHLYSSHGKIA 78
           + S G++     L L+   C   ++LKQIHA +I++G+ +D +  +R L    +S   + 
Sbjct: 16  MPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN 75

Query: 79  YAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ--GIAADKFTFPFVIKA 138
           YA  +F +I +   F WN IIR  + +   E A+ ++ +M+C    +   + T+P V KA
Sbjct: 76  YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135

Query: 139 CTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSW 198
                    GR +H  +IK G   D+F++N ++  Y  CG    A ++F  M   +VV+W
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195

Query: 199 TTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENIC 258
            +MI G   CG +  A+ +FDEMP +N VSW +MI+G++RN   ++AL++F+ MQ +++ 
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255

Query: 259 PNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEV 318
           P+ +TMVSL+ AC  +G    GR IH+Y + N FE+   + TALIDMY KCG I++ + V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315

Query: 319 FKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNV 378
           F+  P K L  WNSMI  L  +G  + A++LFSE+ER  ++PD+++F+GVL AC H   V
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375

Query: 379 EAGCAYFKRMAQHYGIAPIPEHYKCMAELYA----RDEAFESTKAMSMEPDS 423
                +F+ M + Y I P  +HY  M  +       +EA    K M +E D+
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT 427

BLAST of Carg09620 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.8e-76
Identity = 153/420 (36.43%), Postives = 241/420 (57.38%), Query Frame = 0

Query: 31  LFLLQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLY---SSHGK----IAYAIFLFH 90
           L LLQ+C +F  LK IH  ++R+ + +D  +  +L+ L    S+  K    + YA  +F 
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 91  QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDI 150
           QIQNP  F +NL+IR  +      +A   Y  M+   I  D  TFPF+IKA +    + +
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 151 GRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVS 210
           G   H+ ++++GF  D +V+N+L+  Y  CG    A ++F +M   +VVSWT+M++G   
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195

Query: 211 CGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSL 270
           CG V+ AR +FDEMP +N+ +W+ MINGY +N   E+A++LF+ M+ E +  NE  MVS+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255

Query: 271 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 330
           I +C  +G L  G   ++Y + +   + + LGTAL+DM+ +CG I+ AI VF+ +P    
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315

Query: 331 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKR 390
            +W+S+I  L VHG   +A++ FS+M  +   P  +TF  VL AC H   VE G   ++ 
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375

Query: 391 MAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGSL-ALLGVIENADGTD 439
           M + +GI P  EHY C+ ++  R     EA      M ++P++  L ALLG  +    T+
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTE 435

BLAST of Carg09620 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.7e-76
Identity = 156/404 (38.61%), Postives = 239/404 (59.16%), Query Frame = 0

Query: 28  KKALFLLQNCKNFKQLKQIHAKIIRSGI---SNDQLLTRKLIHLYSSHGKIAYAIFLFHQ 87
           +K   L+   ++  ++ QIHA I+R  +       +L  KL   Y+SHGKI +++ LFHQ
Sbjct: 30  EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89

Query: 88  IQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIG 147
             +P  F +   I   +INGL +QA +LY  ++   I  ++FTF  ++K+C+T      G
Sbjct: 90  TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTK----SG 149

Query: 148 RVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSC 207
           ++IH  ++K+G   D +V   L+D Y K G    A KVF++M   ++VS T MI+     
Sbjct: 150 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 209

Query: 208 GDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAE-NICPNEYTMVSL 267
           G+V+AAR +FD M  +++VSW  MI+GY ++  P +AL LF+++ AE    P+E T+V+ 
Sbjct: 210 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 269

Query: 268 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 327
           + AC+++G L  GR IH +  ++   + V + T LIDMYSKCGS+++A+ VF   P K +
Sbjct: 270 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 329

Query: 328 PTWNSMITSLGVHGLGQEALNLFSEMERV-NVKPDAITFVGVLCACVHMKNVEAGCAYFK 387
             WN+MI    +HG  Q+AL LF+EM+ +  ++P  ITF+G L AC H   V  G   F+
Sbjct: 330 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 389

Query: 388 RMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDS 423
            M Q YGI P  EHY C+  L  R      A+E+ K M+M+ DS
Sbjct: 390 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429

BLAST of Carg09620 vs. ExPASy TrEMBL
Match: A0A6J1F6V3 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441407 PE=4 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 1.6e-255
Identity = 436/440 (99.09%), Postives = 439/440 (99.77%), Query Frame = 0

Query: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
           MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQL+QIHAKIIRS ISNDQL
Sbjct: 17  MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLRQIHAKIIRSAISNDQL 76

Query: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
           LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 77  LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 136

Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
           IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 137 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 196

Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
           KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 197 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 256

Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
           ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 257 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 316

Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
           MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 317 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 376

Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
           FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAFESTKAMSMEP
Sbjct: 377 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAFESTKAMSMEP 436

Query: 421 DSGSLALLGVIENADGTDKE 441
           DSGSLALLGVIENADGTDKE
Sbjct: 437 DSGSLALLGVIENADGTDKE 456

BLAST of Carg09620 vs. ExPASy TrEMBL
Match: A0A6J1F116 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441407 PE=4 SV=1)

HSP 1 Score: 891.3 bits (2302), Expect = 1.6e-255
Identity = 436/440 (99.09%), Postives = 439/440 (99.77%), Query Frame = 0

Query: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
           MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQL+QIHAKIIRS ISNDQL
Sbjct: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLRQIHAKIIRSAISNDQL 60

Query: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
           LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61  LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
           IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180

Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
           KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240

Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
           ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300

Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
           MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360

Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
           FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAFESTKAMSMEP
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAFESTKAMSMEP 420

Query: 421 DSGSLALLGVIENADGTDKE 441
           DSGSLALLGVIENADGTDKE
Sbjct: 421 DSGSLALLGVIENADGTDKE 440

BLAST of Carg09620 vs. ExPASy TrEMBL
Match: A0A6J1IZS9 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482147 PE=4 SV=1)

HSP 1 Score: 833.6 bits (2152), Expect = 3.9e-238
Identity = 405/410 (98.78%), Postives = 408/410 (99.51%), Query Frame = 0

Query: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
           MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFK L+QIHAKIIR GISNDQL
Sbjct: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRCGISNDQL 60

Query: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
           LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61  LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
           IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180

Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
           KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240

Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
           ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300

Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
           MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360

Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAF 411
           FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAF
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAF 410

BLAST of Carg09620 vs. ExPASy TrEMBL
Match: A0A6J1J2R2 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482147 PE=4 SV=1)

HSP 1 Score: 833.6 bits (2152), Expect = 3.9e-238
Identity = 405/410 (98.78%), Postives = 408/410 (99.51%), Query Frame = 0

Query: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
           MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFK L+QIHAKIIR GISNDQL
Sbjct: 17  MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRCGISNDQL 76

Query: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
           LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 77  LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 136

Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
           IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 137 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 196

Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
           KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 197 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 256

Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
           ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 257 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 316

Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
           MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 317 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 376

Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAF 411
           FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAF
Sbjct: 377 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAF 426

BLAST of Carg09620 vs. ExPASy TrEMBL
Match: A0A1S3BNB7 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 SV=1)

HSP 1 Score: 763.5 bits (1970), Expect = 5.0e-217
Identity = 369/425 (86.82%), Postives = 393/425 (92.47%), Query Frame = 0

Query: 1   MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
           MVPCLS THDVF + N  L+ RGNI AKKALFLLQNCKNFK L+QIHAKIIRSG+SNDQL
Sbjct: 1   MVPCLSYTHDVFPSKNFSLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 60

Query: 61  LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
           LTRKLIHLYS+HG+I YAIFLF+QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61  LTRKLIHLYSTHGRIVYAIFLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
           IAADKFTFPFVIKACT   +ID+G+V+H S IKYGFSGD FVQNNLIDFYFKCGHK CAL
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSSIKYGFSGDAFVQNNLIDFYFKCGHKHCAL 180

Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
           KVFEKMRVCNVVSWTT+ISGL+SCGD+  ARRIFDEMP KNVVSWTAMINGYIRNQ PEE
Sbjct: 181 KVFEKMRVCNVVSWTTVISGLISCGDLLEARRIFDEMPSKNVVSWTAMINGYIRNQQPEE 240

Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
           ALELFKRMQAENI PNEYTMVSLIKACTEMGILSLGRGIHDY I N FEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGIHDYTIKNCFEIGVYLGTALID 300

Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
           MYSKCGSIKDAIEVF+TMP +SLPTWNSMITSLGVHGLGQ+ALN+FSEMERVNV+PDAIT
Sbjct: 301 MYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVHGLGQQALNIFSEMERVNVEPDAIT 360

Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAM 420
           FVGVLCACVHMKNV+ GCAYFKRM QHYGIAPIPEHY+CM ELYAR    DEAF+STKA+
Sbjct: 361 FVGVLCACVHMKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 420

Query: 421 SMEPD 422
           S+EPD
Sbjct: 421 SVEPD 425

BLAST of Carg09620 vs. TAIR 10
Match: AT3G26630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 431.8 bits (1109), Expect = 6.6e-121
Identity = 214/402 (53.23%), Postives = 286/402 (71.14%), Query Frame = 0

Query: 29  KALFLLQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLYSSHGKIAYAIFLFHQIQNP 88
           +A + L+ C NF QLKQIH KII+  ++NDQLL R+LI + SS G+  YA  +F+Q+Q+P
Sbjct: 22  EASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81

Query: 89  CTFTWNLIIRANTINGLSEQALMLY-KNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVI 148
            TFTWNL+IR+ ++N    +AL+L+   M+      DKFTFPFVIKAC  S +I +G  +
Sbjct: 82  STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141

Query: 149 HASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDV 208
           H   IK GF  D F QN L+D YFKCG      KVF+KM   ++VSWTTM+ GLVS   +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201

Query: 209 QAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKAC 268
            +A  +F++MP +NVVSWTAMI  Y++N+ P+EA +LF+RMQ +++ PNE+T+V+L++A 
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261

Query: 269 TEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWN 328
           T++G LS+GR +HDYA  NGF +  +LGTALIDMYSKCGS++DA +VF  M GKSL TWN
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321

Query: 329 SMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQ 388
           SMITSLGVHG G+EAL+LF EM E  +V+PDAITFVGVL AC +  NV+ G  YF RM Q
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381

Query: 389 HYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGS 425
            YGI+PI EH  CM +L  +    ++A    ++M  +PD  S
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNS 423

BLAST of Carg09620 vs. TAIR 10
Match: AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 288.9 bits (738), Expect = 6.9e-78
Identity = 158/458 (34.50%), Postives = 237/458 (51.75%), Query Frame = 0

Query: 34  LQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTW 93
           L  C N  Q+KQ+HA+IIR  +  D  +  KLI   S   +   A+ +F+Q+Q P     
Sbjct: 26  LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85

Query: 94  NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIK 153
           N +IRA+  N    QA  ++  M   G+ AD FT+PF++KAC+    + + +++H  + K
Sbjct: 86  NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145

Query: 154 YGFSGDTFVQNNLIDFYFKCG--HKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAAR 213
            G S D +V N LID Y +CG    R A+K+FEKM   + VSW +M+ GLV  G+++ AR
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205

Query: 214 RIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICP---------------- 273
           R+FDEMP ++++SW  M++GY R +   +A ELF++M   N                   
Sbjct: 206 RLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265

Query: 274 ------------------------------------------------NEYTMVSLIKAC 333
                                                           +   ++S++ AC
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325

Query: 334 TEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWN 393
           TE G+LSLG  IH     +      Y+  AL+DMY+KCG++K A +VF  +P K L +WN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385

Query: 394 SMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQH 422
           +M+  LGVHG G+EA+ LFS M R  ++PD +TF+ VLC+C H   ++ G  YF  M + 
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445

BLAST of Carg09620 vs. TAIR 10
Match: AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-77
Identity = 150/412 (36.41%), Postives = 237/412 (57.52%), Query Frame = 0

Query: 19  LSSRGNIGAKKALFLLQ-NCKNFKQLKQIHAKIIRSGISNDQL-LTRKLIHLYSSHGKIA 78
           + S G++     L L+   C   ++LKQIHA +I++G+ +D +  +R L    +S   + 
Sbjct: 16  MPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN 75

Query: 79  YAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ--GIAADKFTFPFVIKA 138
           YA  +F +I +   F WN IIR  + +   E A+ ++ +M+C    +   + T+P V KA
Sbjct: 76  YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135

Query: 139 CTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSW 198
                    GR +H  +IK G   D+F++N ++  Y  CG    A ++F  M   +VV+W
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195

Query: 199 TTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENIC 258
            +MI G   CG +  A+ +FDEMP +N VSW +MI+G++RN   ++AL++F+ MQ +++ 
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255

Query: 259 PNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEV 318
           P+ +TMVSL+ AC  +G    GR IH+Y + N FE+   + TALIDMY KCG I++ + V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315

Query: 319 FKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNV 378
           F+  P K L  WNSMI  L  +G  + A++LFSE+ER  ++PD+++F+GVL AC H   V
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375

Query: 379 EAGCAYFKRMAQHYGIAPIPEHYKCMAELYA----RDEAFESTKAMSMEPDS 423
                +F+ M + Y I P  +HY  M  +       +EA    K M +E D+
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT 427

BLAST of Carg09620 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 287.3 bits (734), Expect = 2.0e-77
Identity = 153/420 (36.43%), Postives = 241/420 (57.38%), Query Frame = 0

Query: 31  LFLLQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLY---SSHGK----IAYAIFLFH 90
           L LLQ+C +F  LK IH  ++R+ + +D  +  +L+ L    S+  K    + YA  +F 
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 91  QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDI 150
           QIQNP  F +NL+IR  +      +A   Y  M+   I  D  TFPF+IKA +    + +
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 151 GRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVS 210
           G   H+ ++++GF  D +V+N+L+  Y  CG    A ++F +M   +VVSWT+M++G   
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195

Query: 211 CGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSL 270
           CG V+ AR +FDEMP +N+ +W+ MINGY +N   E+A++LF+ M+ E +  NE  MVS+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255

Query: 271 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 330
           I +C  +G L  G   ++Y + +   + + LGTAL+DM+ +CG I+ AI VF+ +P    
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315

Query: 331 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKR 390
            +W+S+I  L VHG   +A++ FS+M  +   P  +TF  VL AC H   VE G   ++ 
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375

Query: 391 MAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGSL-ALLGVIENADGTD 439
           M + +GI P  EHY C+ ++  R     EA      M ++P++  L ALLG  +    T+
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTE 435

BLAST of Carg09620 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 287.0 bits (733), Expect = 2.6e-77
Identity = 156/404 (38.61%), Postives = 239/404 (59.16%), Query Frame = 0

Query: 28  KKALFLLQNCKNFKQLKQIHAKIIRSGI---SNDQLLTRKLIHLYSSHGKIAYAIFLFHQ 87
           +K   L+   ++  ++ QIHA I+R  +       +L  KL   Y+SHGKI +++ LFHQ
Sbjct: 30  EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89

Query: 88  IQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIG 147
             +P  F +   I   +INGL +QA +LY  ++   I  ++FTF  ++K+C+T      G
Sbjct: 90  TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTK----SG 149

Query: 148 RVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSC 207
           ++IH  ++K+G   D +V   L+D Y K G    A KVF++M   ++VS T MI+     
Sbjct: 150 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 209

Query: 208 GDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAE-NICPNEYTMVSL 267
           G+V+AAR +FD M  +++VSW  MI+GY ++  P +AL LF+++ AE    P+E T+V+ 
Sbjct: 210 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 269

Query: 268 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 327
           + AC+++G L  GR IH +  ++   + V + T LIDMYSKCGS+++A+ VF   P K +
Sbjct: 270 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 329

Query: 328 PTWNSMITSLGVHGLGQEALNLFSEMERV-NVKPDAITFVGVLCACVHMKNVEAGCAYFK 387
             WN+MI    +HG  Q+AL LF+EM+ +  ++P  ITF+G L AC H   V  G   F+
Sbjct: 330 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 389

Query: 388 RMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDS 423
            M Q YGI P  EHY C+  L  R      A+E+ K M+M+ DS
Sbjct: 390 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7017868.14.6e-257100.00Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
KAG6581136.14.6e-257100.00Sialyltransferase-like protein 1, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_022934150.13.3e-25599.09pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... [more]
XP_022934151.13.3e-25599.09pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... [more]
XP_023527079.14.3e-25599.09pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... [more]
Match NameE-valueIdentityDescription
Q389599.3e-12053.23Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidop... [more]
Q9LS729.8e-7734.50Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... [more]
Q9SJG62.2e-7636.41Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... [more]
Q9FG162.8e-7636.43Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... [more]
Q9SZT83.7e-7638.61Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... [more]
Match NameE-valueIdentityDescription
A0A6J1F6V31.6e-25599.09pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... [more]
A0A6J1F1161.6e-25599.09pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... [more]
A0A6J1IZS93.9e-23898.78pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X2 ... [more]
A0A6J1J2R23.9e-23898.78pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 ... [more]
A0A1S3BNB75.0e-21786.82pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 ... [more]
Match NameE-valueIdentityDescription
AT3G26630.16.6e-12153.23Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G29230.16.9e-7834.50Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G42920.11.5e-7736.41Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G06540.12.0e-7736.43Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G37380.12.6e-7738.61Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 190..217
e-value: 2.4E-5
score: 24.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 192..222
e-value: 9.7E-7
score: 26.6
coord: 223..257
e-value: 8.4E-11
score: 39.4
coord: 325..358
e-value: 2.3E-6
score: 25.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 88..135
e-value: 2.9E-8
score: 33.8
coord: 220..267
e-value: 1.0E-14
score: 54.5
coord: 325..369
e-value: 2.3E-9
score: 37.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 296..321
e-value: 8.1E-4
score: 19.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 221..255
score: 13.065928
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 322..356
score: 10.939435
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 190..220
score: 9.941957
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 146..273
e-value: 5.7E-35
score: 122.3
coord: 19..142
e-value: 5.0E-14
score: 54.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 274..428
e-value: 1.4E-26
score: 95.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 173..349
NoneNo IPR availablePANTHERPTHR47926:SF109BNAA06G32750D PROTEINcoord: 20..412
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 20..412

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09620-RACarg09620-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding