Homology
BLAST of Carg09620 vs. NCBI nr
Match:
KAG7017868.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 897.5 bits (2318), Expect = 4.6e-257
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0
Query: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL
Sbjct: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
Query: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
Query: 421 DSGSLALLGVIENADGTDKE 441
DSGSLALLGVIENADGTDKE
Sbjct: 421 DSGSLALLGVIENADGTDKE 440
BLAST of Carg09620 vs. NCBI nr
Match:
KAG6581136.1 (Sialyltransferase-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 897.5 bits (2318), Expect = 4.6e-257
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0
Query: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL
Sbjct: 541 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 600
Query: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 601 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 660
Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 661 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 720
Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 721 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 780
Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 781 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 840
Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 841 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 900
Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP
Sbjct: 901 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 960
Query: 421 DSGSLALLGVIENADGTDKE 441
DSGSLALLGVIENADGTDKE
Sbjct: 961 DSGSLALLGVIENADGTDKE 980
BLAST of Carg09620 vs. NCBI nr
Match:
XP_022934150.1 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 891.3 bits (2302), Expect = 3.3e-255
Identity = 436/440 (99.09%), Postives = 439/440 (99.77%), Query Frame = 0
Query: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQL+QIHAKIIRS ISNDQL
Sbjct: 17 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLRQIHAKIIRSAISNDQL 76
Query: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 77 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 136
Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 137 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 196
Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 197 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 256
Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 257 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 316
Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 317 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 376
Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAFESTKAMSMEP
Sbjct: 377 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAFESTKAMSMEP 436
Query: 421 DSGSLALLGVIENADGTDKE 441
DSGSLALLGVIENADGTDKE
Sbjct: 437 DSGSLALLGVIENADGTDKE 456
BLAST of Carg09620 vs. NCBI nr
Match:
XP_022934151.1 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 891.3 bits (2302), Expect = 3.3e-255
Identity = 436/440 (99.09%), Postives = 439/440 (99.77%), Query Frame = 0
Query: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQL+QIHAKIIRS ISNDQL
Sbjct: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLRQIHAKIIRSAISNDQL 60
Query: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAFESTKAMSMEP
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAFESTKAMSMEP 420
Query: 421 DSGSLALLGVIENADGTDKE 441
DSGSLALLGVIENADGTDKE
Sbjct: 421 DSGSLALLGVIENADGTDKE 440
BLAST of Carg09620 vs. NCBI nr
Match:
XP_023527079.1 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 891.0 bits (2301), Expect = 4.3e-255
Identity = 436/440 (99.09%), Postives = 438/440 (99.55%), Query Frame = 0
Query: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFK L+QIHAKIIRS ISNDQL
Sbjct: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRSAISNDQL 60
Query: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
Query: 421 DSGSLALLGVIENADGTDKE 441
DSGSLALLGVIENADGTDKE
Sbjct: 421 DSGSLALLGVIENADGTDKE 440
BLAST of Carg09620 vs. ExPASy Swiss-Prot
Match:
Q38959 (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A6 PE=2 SV=1)
HSP 1 Score: 431.8 bits (1109), Expect = 9.3e-120
Identity = 214/402 (53.23%), Postives = 286/402 (71.14%), Query Frame = 0
Query: 29 KALFLLQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLYSSHGKIAYAIFLFHQIQNP 88
+A + L+ C NF QLKQIH KII+ ++NDQLL R+LI + SS G+ YA +F+Q+Q+P
Sbjct: 22 EASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 89 CTFTWNLIIRANTINGLSEQALMLY-KNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVI 148
TFTWNL+IR+ ++N +AL+L+ M+ DKFTFPFVIKAC S +I +G +
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 149 HASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDV 208
H IK GF D F QN L+D YFKCG KVF+KM ++VSWTTM+ GLVS +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 209 QAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKAC 268
+A +F++MP +NVVSWTAMI Y++N+ P+EA +LF+RMQ +++ PNE+T+V+L++A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 269 TEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWN 328
T++G LS+GR +HDYA NGF + +LGTALIDMYSKCGS++DA +VF M GKSL TWN
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 329 SMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQ 388
SMITSLGVHG G+EAL+LF EM E +V+PDAITFVGVL AC + NV+ G YF RM Q
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 389 HYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGS 425
YGI+PI EH CM +L + ++A ++M +PD S
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNS 423
BLAST of Carg09620 vs. ExPASy Swiss-Prot
Match:
Q9LS72 (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E27 PE=2 SV=1)
HSP 1 Score: 288.9 bits (738), Expect = 9.8e-77
Identity = 158/458 (34.50%), Postives = 237/458 (51.75%), Query Frame = 0
Query: 34 LQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTW 93
L C N Q+KQ+HA+IIR + D + KLI S + A+ +F+Q+Q P
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 94 NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIK 153
N +IRA+ N QA ++ M G+ AD FT+PF++KAC+ + + +++H + K
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 154 YGFSGDTFVQNNLIDFYFKCG--HKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAAR 213
G S D +V N LID Y +CG R A+K+FEKM + VSW +M+ GLV G+++ AR
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 214 RIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICP---------------- 273
R+FDEMP ++++SW M++GY R + +A ELF++M N
Sbjct: 206 RLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 274 ------------------------------------------------NEYTMVSLIKAC 333
+ ++S++ AC
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 334 TEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWN 393
TE G+LSLG IH + Y+ AL+DMY+KCG++K A +VF +P K L +WN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 394 SMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQH 422
+M+ LGVHG G+EA+ LFS M R ++PD +TF+ VLC+C H ++ G YF M +
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
BLAST of Carg09620 vs. ExPASy Swiss-Prot
Match:
Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)
HSP 1 Score: 287.7 bits (735), Expect = 2.2e-76
Identity = 150/412 (36.41%), Postives = 237/412 (57.52%), Query Frame = 0
Query: 19 LSSRGNIGAKKALFLLQ-NCKNFKQLKQIHAKIIRSGISNDQL-LTRKLIHLYSSHGKIA 78
+ S G++ L L+ C ++LKQIHA +I++G+ +D + +R L +S +
Sbjct: 16 MPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN 75
Query: 79 YAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ--GIAADKFTFPFVIKA 138
YA +F +I + F WN IIR + + E A+ ++ +M+C + + T+P V KA
Sbjct: 76 YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 139 CTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSW 198
GR +H +IK G D+F++N ++ Y CG A ++F M +VV+W
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195
Query: 199 TTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENIC 258
+MI G CG + A+ +FDEMP +N VSW +MI+G++RN ++AL++F+ MQ +++
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 259 PNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEV 318
P+ +TMVSL+ AC +G GR IH+Y + N FE+ + TALIDMY KCG I++ + V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 319 FKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNV 378
F+ P K L WNSMI L +G + A++LFSE+ER ++PD+++F+GVL AC H V
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 379 EAGCAYFKRMAQHYGIAPIPEHYKCMAELYA----RDEAFESTKAMSMEPDS 423
+F+ M + Y I P +HY M + +EA K M +E D+
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT 427
BLAST of Carg09620 vs. ExPASy Swiss-Prot
Match:
Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 287.3 bits (734), Expect = 2.8e-76
Identity = 153/420 (36.43%), Postives = 241/420 (57.38%), Query Frame = 0
Query: 31 LFLLQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLY---SSHGK----IAYAIFLFH 90
L LLQ+C +F LK IH ++R+ + +D + +L+ L S+ K + YA +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 91 QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDI 150
QIQNP F +NL+IR + +A Y M+ I D TFPF+IKA + + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 151 GRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVS 210
G H+ ++++GF D +V+N+L+ Y CG A ++F +M +VVSWT+M++G
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 211 CGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSL 270
CG V+ AR +FDEMP +N+ +W+ MINGY +N E+A++LF+ M+ E + NE MVS+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 271 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 330
I +C +G L G ++Y + + + + LGTAL+DM+ +CG I+ AI VF+ +P
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 331 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKR 390
+W+S+I L VHG +A++ FS+M + P +TF VL AC H VE G ++
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 391 MAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGSL-ALLGVIENADGTD 439
M + +GI P EHY C+ ++ R EA M ++P++ L ALLG + T+
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTE 435
BLAST of Carg09620 vs. ExPASy Swiss-Prot
Match:
Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)
HSP 1 Score: 287.0 bits (733), Expect = 3.7e-76
Identity = 156/404 (38.61%), Postives = 239/404 (59.16%), Query Frame = 0
Query: 28 KKALFLLQNCKNFKQLKQIHAKIIRSGI---SNDQLLTRKLIHLYSSHGKIAYAIFLFHQ 87
+K L+ ++ ++ QIHA I+R + +L KL Y+SHGKI +++ LFHQ
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 88 IQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIG 147
+P F + I +INGL +QA +LY ++ I ++FTF ++K+C+T G
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTK----SG 149
Query: 148 RVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSC 207
++IH ++K+G D +V L+D Y K G A KVF++M ++VS T MI+
Sbjct: 150 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 209
Query: 208 GDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAE-NICPNEYTMVSL 267
G+V+AAR +FD M +++VSW MI+GY ++ P +AL LF+++ AE P+E T+V+
Sbjct: 210 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 269
Query: 268 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 327
+ AC+++G L GR IH + ++ + V + T LIDMYSKCGS+++A+ VF P K +
Sbjct: 270 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 329
Query: 328 PTWNSMITSLGVHGLGQEALNLFSEMERV-NVKPDAITFVGVLCACVHMKNVEAGCAYFK 387
WN+MI +HG Q+AL LF+EM+ + ++P ITF+G L AC H V G F+
Sbjct: 330 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 389
Query: 388 RMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDS 423
M Q YGI P EHY C+ L R A+E+ K M+M+ DS
Sbjct: 390 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
BLAST of Carg09620 vs. ExPASy TrEMBL
Match:
A0A6J1F6V3 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441407 PE=4 SV=1)
HSP 1 Score: 891.3 bits (2302), Expect = 1.6e-255
Identity = 436/440 (99.09%), Postives = 439/440 (99.77%), Query Frame = 0
Query: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQL+QIHAKIIRS ISNDQL
Sbjct: 17 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLRQIHAKIIRSAISNDQL 76
Query: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 77 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 136
Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 137 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 196
Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 197 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 256
Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 257 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 316
Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 317 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 376
Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAFESTKAMSMEP
Sbjct: 377 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAFESTKAMSMEP 436
Query: 421 DSGSLALLGVIENADGTDKE 441
DSGSLALLGVIENADGTDKE
Sbjct: 437 DSGSLALLGVIENADGTDKE 456
BLAST of Carg09620 vs. ExPASy TrEMBL
Match:
A0A6J1F116 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441407 PE=4 SV=1)
HSP 1 Score: 891.3 bits (2302), Expect = 1.6e-255
Identity = 436/440 (99.09%), Postives = 439/440 (99.77%), Query Frame = 0
Query: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQL+QIHAKIIRS ISNDQL
Sbjct: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLRQIHAKIIRSAISNDQL 60
Query: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAFESTKAMSMEP 420
FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAFESTKAMSMEP
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAFESTKAMSMEP 420
Query: 421 DSGSLALLGVIENADGTDKE 441
DSGSLALLGVIENADGTDKE
Sbjct: 421 DSGSLALLGVIENADGTDKE 440
BLAST of Carg09620 vs. ExPASy TrEMBL
Match:
A0A6J1IZS9 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482147 PE=4 SV=1)
HSP 1 Score: 833.6 bits (2152), Expect = 3.9e-238
Identity = 405/410 (98.78%), Postives = 408/410 (99.51%), Query Frame = 0
Query: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFK L+QIHAKIIR GISNDQL
Sbjct: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRCGISNDQL 60
Query: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAF 411
FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAF
Sbjct: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAF 410
BLAST of Carg09620 vs. ExPASy TrEMBL
Match:
A0A6J1J2R2 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482147 PE=4 SV=1)
HSP 1 Score: 833.6 bits (2152), Expect = 3.9e-238
Identity = 405/410 (98.78%), Postives = 408/410 (99.51%), Query Frame = 0
Query: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFK L+QIHAKIIR GISNDQL
Sbjct: 17 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKHLRQIHAKIIRCGISNDQL 76
Query: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
LTRKLIHLYSSHG+IAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 77 LTRKLIHLYSSHGRIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 136
Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL
Sbjct: 137 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 196
Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE
Sbjct: 197 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 256
Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID
Sbjct: 257 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 316
Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT
Sbjct: 317 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 376
Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYARDEAF 411
FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYA+DEAF
Sbjct: 377 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAQDEAF 426
BLAST of Carg09620 vs. ExPASy TrEMBL
Match:
A0A1S3BNB7 (pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491736 PE=4 SV=1)
HSP 1 Score: 763.5 bits (1970), Expect = 5.0e-217
Identity = 369/425 (86.82%), Postives = 393/425 (92.47%), Query Frame = 0
Query: 1 MVPCLSSTHDVFATTNLLLSSRGNIGAKKALFLLQNCKNFKQLKQIHAKIIRSGISNDQL 60
MVPCLS THDVF + N L+ RGNI AKKALFLLQNCKNFK L+QIHAKIIRSG+SNDQL
Sbjct: 1 MVPCLSYTHDVFPSKNFSLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQL 60
Query: 61 LTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
LTRKLIHLYS+HG+I YAIFLF+QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG
Sbjct: 61 LTRKLIHLYSTHGRIVYAIFLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120
Query: 121 IAADKFTFPFVIKACTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCAL 180
IAADKFTFPFVIKACT +ID+G+V+H S IKYGFSGD FVQNNLIDFYFKCGHK CAL
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSSIKYGFSGDAFVQNNLIDFYFKCGHKHCAL 180
Query: 181 KVFEKMRVCNVVSWTTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEE 240
KVFEKMRVCNVVSWTT+ISGL+SCGD+ ARRIFDEMP KNVVSWTAMINGYIRNQ PEE
Sbjct: 181 KVFEKMRVCNVVSWTTVISGLISCGDLLEARRIFDEMPSKNVVSWTAMINGYIRNQQPEE 240
Query: 241 ALELFKRMQAENICPNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALID 300
ALELFKRMQAENI PNEYTMVSLIKACTEMGILSLGRGIHDY I N FEIGVYLGTALID
Sbjct: 241 ALELFKRMQAENIFPNEYTMVSLIKACTEMGILSLGRGIHDYTIKNCFEIGVYLGTALID 300
Query: 301 MYSKCGSIKDAIEVFKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAIT 360
MYSKCGSIKDAIEVF+TMP +SLPTWNSMITSLGVHGLGQ+ALN+FSEMERVNV+PDAIT
Sbjct: 301 MYSKCGSIKDAIEVFETMPRRSLPTWNSMITSLGVHGLGQQALNIFSEMERVNVEPDAIT 360
Query: 361 FVGVLCACVHMKNVEAGCAYFKRMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAM 420
FVGVLCACVHMKNV+ GCAYFKRM QHYGIAPIPEHY+CM ELYAR DEAF+STKA+
Sbjct: 361 FVGVLCACVHMKNVKEGCAYFKRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKAI 420
Query: 421 SMEPD 422
S+EPD
Sbjct: 421 SVEPD 425
BLAST of Carg09620 vs. TAIR 10
Match:
AT3G26630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 431.8 bits (1109), Expect = 6.6e-121
Identity = 214/402 (53.23%), Postives = 286/402 (71.14%), Query Frame = 0
Query: 29 KALFLLQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLYSSHGKIAYAIFLFHQIQNP 88
+A + L+ C NF QLKQIH KII+ ++NDQLL R+LI + SS G+ YA +F+Q+Q+P
Sbjct: 22 EASYFLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSP 81
Query: 89 CTFTWNLIIRANTINGLSEQALMLY-KNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVI 148
TFTWNL+IR+ ++N +AL+L+ M+ DKFTFPFVIKAC S +I +G +
Sbjct: 82 STFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQV 141
Query: 149 HASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSCGDV 208
H IK GF D F QN L+D YFKCG KVF+KM ++VSWTTM+ GLVS +
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 209 QAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSLIKAC 268
+A +F++MP +NVVSWTAMI Y++N+ P+EA +LF+RMQ +++ PNE+T+V+L++A
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAS 261
Query: 269 TEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWN 328
T++G LS+GR +HDYA NGF + +LGTALIDMYSKCGS++DA +VF M GKSL TWN
Sbjct: 262 TQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN 321
Query: 329 SMITSLGVHGLGQEALNLFSEM-ERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQ 388
SMITSLGVHG G+EAL+LF EM E +V+PDAITFVGVL AC + NV+ G YF RM Q
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 389 HYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGS 425
YGI+PI EH CM +L + ++A ++M +PD S
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPDFNS 423
BLAST of Carg09620 vs. TAIR 10
Match:
AT3G29230.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 288.9 bits (738), Expect = 6.9e-78
Identity = 158/458 (34.50%), Postives = 237/458 (51.75%), Query Frame = 0
Query: 34 LQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLYSSHGKIAYAIFLFHQIQNPCTFTW 93
L C N Q+KQ+HA+IIR + D + KLI S + A+ +F+Q+Q P
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLC 85
Query: 94 NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIGRVIHASLIK 153
N +IRA+ N QA ++ M G+ AD FT+PF++KAC+ + + +++H + K
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEK 145
Query: 154 YGFSGDTFVQNNLIDFYFKCG--HKRCALKVFEKMRVCNVVSWTTMISGLVSCGDVQAAR 213
G S D +V N LID Y +CG R A+K+FEKM + VSW +M+ GLV G+++ AR
Sbjct: 146 LGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDAR 205
Query: 214 RIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICP---------------- 273
R+FDEMP ++++SW M++GY R + +A ELF++M N
Sbjct: 206 RLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEM 265
Query: 274 ------------------------------------------------NEYTMVSLIKAC 333
+ ++S++ AC
Sbjct: 266 ARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 334 TEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSLPTWN 393
TE G+LSLG IH + Y+ AL+DMY+KCG++K A +VF +P K L +WN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 394 SMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKRMAQH 422
+M+ LGVHG G+EA+ LFS M R ++PD +TF+ VLC+C H ++ G YF M +
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
BLAST of Carg09620 vs. TAIR 10
Match:
AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 287.7 bits (735), Expect = 1.5e-77
Identity = 150/412 (36.41%), Postives = 237/412 (57.52%), Query Frame = 0
Query: 19 LSSRGNIGAKKALFLLQ-NCKNFKQLKQIHAKIIRSGISNDQL-LTRKLIHLYSSHGKIA 78
+ S G++ L L+ C ++LKQIHA +I++G+ +D + +R L +S +
Sbjct: 16 MPSSGSLSGNTYLRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMN 75
Query: 79 YAIFLFHQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQ--GIAADKFTFPFVIKA 138
YA +F +I + F WN IIR + + E A+ ++ +M+C + + T+P V KA
Sbjct: 76 YAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA 135
Query: 139 CTTSFAIDIGRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSW 198
GR +H +IK G D+F++N ++ Y CG A ++F M +VV+W
Sbjct: 136 YGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAW 195
Query: 199 TTMISGLVSCGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENIC 258
+MI G CG + A+ +FDEMP +N VSW +MI+G++RN ++AL++F+ MQ +++
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 259 PNEYTMVSLIKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEV 318
P+ +TMVSL+ AC +G GR IH+Y + N FE+ + TALIDMY KCG I++ + V
Sbjct: 256 PDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNV 315
Query: 319 FKTMPGKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNV 378
F+ P K L WNSMI L +G + A++LFSE+ER ++PD+++F+GVL AC H V
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEV 375
Query: 379 EAGCAYFKRMAQHYGIAPIPEHYKCMAELYA----RDEAFESTKAMSMEPDS 423
+F+ M + Y I P +HY M + +EA K M +E D+
Sbjct: 376 HRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT 427
BLAST of Carg09620 vs. TAIR 10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 287.3 bits (734), Expect = 2.0e-77
Identity = 153/420 (36.43%), Postives = 241/420 (57.38%), Query Frame = 0
Query: 31 LFLLQNCKNFKQLKQIHAKIIRSGISNDQLLTRKLIHLY---SSHGK----IAYAIFLFH 90
L LLQ+C +F LK IH ++R+ + +D + +L+ L S+ K + YA +F
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 91 QIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDI 150
QIQNP F +NL+IR + +A Y M+ I D TFPF+IKA + + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 151 GRVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVS 210
G H+ ++++GF D +V+N+L+ Y CG A ++F +M +VVSWT+M++G
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 211 CGDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAENICPNEYTMVSL 270
CG V+ AR +FDEMP +N+ +W+ MINGY +N E+A++LF+ M+ E + NE MVS+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 271 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 330
I +C +G L G ++Y + + + + LGTAL+DM+ +CG I+ AI VF+ +P
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 331 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFVGVLCACVHMKNVEAGCAYFKR 390
+W+S+I L VHG +A++ FS+M + P +TF VL AC H VE G ++
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 391 MAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDSGSL-ALLGVIENADGTD 439
M + +GI P EHY C+ ++ R EA M ++P++ L ALLG + T+
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTE 435
BLAST of Carg09620 vs. TAIR 10
Match:
AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 287.0 bits (733), Expect = 2.6e-77
Identity = 156/404 (38.61%), Postives = 239/404 (59.16%), Query Frame = 0
Query: 28 KKALFLLQNCKNFKQLKQIHAKIIRSGI---SNDQLLTRKLIHLYSSHGKIAYAIFLFHQ 87
+K L+ ++ ++ QIHA I+R + +L KL Y+SHGKI +++ LFHQ
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 88 IQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTTSFAIDIG 147
+P F + I +INGL +QA +LY ++ I ++FTF ++K+C+T G
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTK----SG 149
Query: 148 RVIHASLIKYGFSGDTFVQNNLIDFYFKCGHKRCALKVFEKMRVCNVVSWTTMISGLVSC 207
++IH ++K+G D +V L+D Y K G A KVF++M ++VS T MI+
Sbjct: 150 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 209
Query: 208 GDVQAARRIFDEMPCKNVVSWTAMINGYIRNQNPEEALELFKRMQAE-NICPNEYTMVSL 267
G+V+AAR +FD M +++VSW MI+GY ++ P +AL LF+++ AE P+E T+V+
Sbjct: 210 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 269
Query: 268 IKACTEMGILSLGRGIHDYAINNGFEIGVYLGTALIDMYSKCGSIKDAIEVFKTMPGKSL 327
+ AC+++G L GR IH + ++ + V + T LIDMYSKCGS+++A+ VF P K +
Sbjct: 270 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 329
Query: 328 PTWNSMITSLGVHGLGQEALNLFSEMERV-NVKPDAITFVGVLCACVHMKNVEAGCAYFK 387
WN+MI +HG Q+AL LF+EM+ + ++P ITF+G L AC H V G F+
Sbjct: 330 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 389
Query: 388 RMAQHYGIAPIPEHYKCMAELYAR----DEAFESTKAMSMEPDS 423
M Q YGI P EHY C+ L R A+E+ K M+M+ DS
Sbjct: 390 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7017868.1 | 4.6e-257 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG6581136.1 | 4.6e-257 | 100.00 | Sialyltransferase-like protein 1, partial [Cucurbita argyrosperma subsp. sororia... | [more] |
XP_022934150.1 | 3.3e-255 | 99.09 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... | [more] |
XP_022934151.1 | 3.3e-255 | 99.09 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... | [more] |
XP_023527079.1 | 4.3e-255 | 99.09 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... | [more] |
Match Name | E-value | Identity | Description | |
Q38959 | 9.3e-120 | 53.23 | Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidop... | [more] |
Q9LS72 | 9.8e-77 | 34.50 | Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana OX... | [more] |
Q9SJG6 | 2.2e-76 | 36.41 | Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop... | [more] |
Q9FG16 | 2.8e-76 | 36.43 | Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX... | [more] |
Q9SZT8 | 3.7e-76 | 38.61 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F6V3 | 1.6e-255 | 99.09 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... | [more] |
A0A6J1F116 | 1.6e-255 | 99.09 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like isofor... | [more] |
A0A6J1IZS9 | 3.9e-238 | 98.78 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X2 ... | [more] |
A0A6J1J2R2 | 3.9e-238 | 98.78 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 ... | [more] |
A0A1S3BNB7 | 5.0e-217 | 86.82 | pentatricopeptide repeat-containing protein At3g26630, chloroplastic isoform X1 ... | [more] |
Match Name | E-value | Identity | Description | |
AT3G26630.1 | 6.6e-121 | 53.23 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G29230.1 | 6.9e-78 | 34.50 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G42920.1 | 1.5e-77 | 36.41 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G06540.1 | 2.0e-77 | 36.43 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G37380.1 | 2.6e-77 | 38.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |