Carg09602 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09602
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RNA helicase
Location	Carg_Chr17: 7036534 .. 7040477 (-)
RNA-Seq Expression	Carg09602
Synteny	Carg09602

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCATAACACTCCTAACCAGAAAATTGTACTAATTTATTTTCTTTACAAAAATAATATAAATCTATACTAGTGGTTCCGCCGCCGGCTGAGCGACGGTGTTACACGGGCTTCAGACCCTTTTGCGTCTTTTTTGTTTCTGCCGACTAGAGCGGCCGCCGGTTTTCTCGACAGTGACCCTACCGCCGTCCAATTCCCTTTGCGTCTCAATAACATTCTCTTCTGTCGGTTATCTATACCAATTTCTCCGTTTTGTTCCTGTTCGAATCCCGACAACGAAGACCAAGAGGAGTGATCTGCTCCTCGTGTAAACGCTTCGAGTAAGTTTTAGCTTCTTTTTTCTTTTGATACTCTGTTCGAGTTCTTAGTATCGATTCATTTGTCGATGAAGCTAATTTCATGTATTTGTCTCTAAATCCGTCTCTGTGTGGCTCGAATTGAACGGGATTGTATGTCGGAGACCCTAATCGGAATCTATCATTGACGATTCTAATTAGAGAGGCTCGTTATTGTCTGTAATTGGTTTCTGCATTTAGGGTTTGTTGTTTGGCTATTTGTAATTGATATCTGCGTGTAATATGAAATCTAATGGTTTCTAGGGTTAGCGGAGAGGTGTTTTGGGATTGAATTTCATTATACGATGGATTTACAAATGAAGGACGAAAAGAGCTTGGAAGAAGAAGAAGATGATTTTGTTGAATATGTTCCTGTGGCAAAGCGTAGAGCCATGGAAGCTCAAAAGATTCTTATGCGCAAAGGCAAGGCTTCTGCCCTTGAAGAAGAGTTGGAGAAATCAAGGCTTGCCGAAGCCAAGCCGAGTCTCCTCGTAAAAGCATCTCAGATGAAGCGTGACCAACCAGAAGTTAGTCCGACCGAGCAGATCGTTCAGCAAGAGAAGGAGATGATCGAGCACTTATCTGATCGTAAAACTCTAATGTCGGTTCGTGAACTAGCCAAAGGAATTACTTACACAGAGCCATTGTTAACTGGATGGAAACCACCATTGCCTATCAGGAGGATGTCAAGAAAGGCATGTGATTTGATTCGCAAACAATGGCACATAATAGTCGATGGTGACGATATTCCACCGCCTATTAAGAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAGTTGAAAGAAAAGGGAATCGTGCAGCCGACTCCGATTCAGGTCCAAGGTCTGCCTGTGATTTTATCTGGCAGAGATATGATTGGGATTGCGTTTACTGGTTCGGGAAAGACCCTAGTTTTCGTTCTTCCTTTGATAATGATTGCGTTACAAGAAGAGGTCATGATGCCCATTGTTTCAGGGGAAGGACCTTTTGGTTTGATCATTTGTCCTTCAAGGGAGCTTGCTAGACAGACCTATGAAGTGGTGGAACAGTTCTTAATACCCATGAAGGAGGCTGGATATCCAGAACTTAGGCCTTTGCTCTGTATAGGCGGGGTGGATATGCGATCACAGATCGAGGTTGTGAAGAAGGGTGTTCATATCGTTGTTGCAACCCCCGGCAGGTTGAAGGATATGTTGGCGAAAAAGAAAATGAACCTTGACAATTGCAGGTATCTTACTTTAGATGAGGCTGATAGATTAGTGGATCTAGGATTCGAAGACGATATTCGGGAAGTTTTTGATCATTTCAAGGCTCAACGCCAAACTCTATTGTTTTCTGCTACAATGCCTACCAAAATTCAAAACTTTGCAAGAAGTGCACTAGTAAAGCCTGTCACTGTTAACGTCGGAAGAGCTGGAGCTGCAAACCTCGACGTCATCCAGGAGGTCGAGTACGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGTCTGCAGAAAACTCCACCTCCGGTGTTGATATTTTGTGAGAATAAAGCCGATGTTGACGACATTCACGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTGGCAATACATGGAGGAAAAGATCAGGAAGAAAGAGAGTATGCTATCTCTTCATTTAAGGCGAGCAAGAAAGATGTATTGGTTGCTACTGATGTTGCATCAAAGGGTTTAGATTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTACGTTCATAGGATTGGACGAACTGGACGGTGTGGTAAGACGGGAATTGCAACAACTTTCATAAACAAGAATCAAAGCGAAACAACCCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTGTTGGCTGAGCTGAATGACCCTATGGAGGACGTGGAAGCGATCACCAATGCAAGCGGGGTCAAAGGTTGCGCTTATTGTGGCGGGCTTGGTCACCGTATCCGTGACTGCCCCAAGTTAGAGCATCAGAAAAGCATGGCGATTGCAAGTTCAAGAAGAGACTATTTTGGATCAGGCGGCTATAGAGGAGAAATTTGAGAAAGCTAAGAACAGAGGAAGGTATTTTTGTTTGATTTCCCCTTCCCTGCAGCTTGTAACTCTATAAACTGATGAATTAGAGTGGTAATTGTTTGTCTGCTTGACATTTGCTAGTCGACATTGATTTGATATCAGGGACAATGACACATGATCGAGAATCGGTGTCGATTAACCTTACTATGGATATCACTGATTGACAGTCTTTACAAATGATGACAAAAGAGAAGGGCCTGCTGAAAAAAGAGAGTATAAAATCTTGTCTTCCATCAGAACTTTCTGCAACAGAGATGAACTGAAGCAGATATGTGCATTCAGGTCAGTTGAGAGTCCTTGAGTTTTGACTTCTTTTCTGAAAGTAAATAGCCTAACAGATCAACAGCTAGTCAACTGGAACTTCTACATCCATTCTTATGCCTGATTTATCAAGAACCTGCGAAAGAATGGCATAAAATGAAAACATTCATCTCTATAAATCAAGAACGATGTAACTATTCAATCCCGCTAACAGATATTGTCTTATTCGAACTTCCCCTCAAGGTTTTTAAGACACGTCTTTCAAAGTGATGCAGCAAAACCAGTACTCATCCAGATACTGTCCTCCTTGGGTTTTCCATTTCTGGACTTCCCTTCAAGGTTTTTGGGTTTTCCCTTCTGGGTTTTCCCGTCTACTAGAGTTAGGTTTCCACACTCTTATAAGGAATGTTTCGTTCCACTCTCTAATCGATGTAGGACCTTACGACCAAGGTGATGAGTTGTGTTGGTTTCTTATACTCTCTAGTAAAGTATGGTAAATCAATGAAACATGTCAGCACGTTAACAGTACCTTGATGCAGTCATCGAGTGTCAAGAGAGAGTTTCTTGTATAGCCTGCTTCTTGTAACAATTGGCACAATACTTGCTGCAATGGGAAAGAGAAACTAATAATAGTTCGTTTATGAAGGTGAAAGAAATAATATGAGCACAAAGAAAATGTAGTTATTCCACTTCATGTGTTAGGACTGGACTAAATATGTTCCTTTCGAGCTACGTAAATACTCTCAATGCCTATGCACGAGCAGACATATCATCATCAAGGAGATGCATCAAGTAACTGTATGCATGGATTGGTGTCTCTTTCCGAGGATTTATATGCTATGTATTTGATACTAAATGAATCACATTGCGTTTTCAGATAACGATGAATTGGAGAAGCAACACAGATGCGAAATATCGAACAAGCAACACAGATGCGAAATATCGAACGAAAGGAAAGAAGACGCCATGCCTCTCTCTGCTCGTCGGAGATGAATGAATTAGACGAATCCCCAAGCACTTCAATGATGTCGTTGAAAGACACCTTCCCGTTGCAGTCAACATCATATAGCTTGAAAATAACTGAAATAAGGAGACACTAGCAATTATTAATACGAAATGAACCATCTCAAAGTAGTTTTCTTAGAGTCAATATCATGTATTAATGTCAGTTCAGGACAAAAAGTTTTTCCATTTAGTCCTGAACTTATAATTCA

mRNA sequence

AAGCATAACACTCCTAACCAGAAAATTTGGTTCCGCCGCCGGCTGAGCGACGGTGTTACACGGGCTTCAGACCCTTTTGCGTCTTTTTTGTTTCTGCCGACTAGAGCGGCCGCCGGGTTAGCGGAGAGGTGTTTTGGGATTGAATTTCATTATACGATGGATTTACAAATGAAGGACGAAAAGAGCTTGGAAGAAGAAGAAGATGATTTTGTTGAATATGTTCCTGTGGCAAAGCGTAGAGCCATGGAAGCTCAAAAGATTCTTATGCGCAAAGGCAAGGCTTCTGCCCTTGAAGAAGAGTTGGAGAAATCAAGGCTTGCCGAAGCCAAGCCGAGTCTCCTCGTAAAAGCATCTCAGATGAAGCGTGACCAACCAGAAGTTAGTCCGACCGAGCAGATCGTTCAGCAAGAGAAGGAGATGATCGAGCACTTATCTGATCGTAAAACTCTAATGTCGGTTCGTGAACTAGCCAAAGGAATTACTTACACAGAGCCATTGTTAACTGGATGGAAACCACCATTGCCTATCAGGAGGATGTCAAGAAAGGCATGTGATTTGATTCGCAAACAATGGCACATAATAGTCGATGGTGACGATATTCCACCGCCTATTAAGAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAGTTGAAAGAAAAGGGAATCGTGCAGCCGACTCCGATTCAGGTCCAAGGTCTGCCTGTGATTTTATCTGGCAGAGATATGATTGGGATTGCGTTTACTGGTTCGGGAAAGACCCTAGTTTTCGTTCTTCCTTTGATAATGATTGCGTTACAAGAAGAGGTCATGATGCCCATTGTTTCAGGGGAAGGACCTTTTGGTTTGATCATTTGTCCTTCAAGGGAGCTTGCTAGACAGACCTATGAAGTGGTGGAACAGTTCTTAATACCCATGAAGGAGGCTGGATATCCAGAACTTAGGCCTTTGCTCTGTATAGGCGGGGTGGATATGCGATCACAGATCGAGGTTGTGAAGAAGGGTGTTCATATCGTTGTTGCAACCCCCGGCAGGTTGAAGGATATGTTGGCGAAAAAGAAAATGAACCTTGACAATTGCAGGTATCTTACTTTAGATGAGGCTGATAGATTAGTGGATCTAGGATTCGAAGACGATATTCGGGAAGTTTTTGATCATTTCAAGGCTCAACGCCAAACTCTATTGTTTTCTGCTACAATGCCTACCAAAATTCAAAACTTTGCAAGAAGTGCACTAGTAAAGCCTGTCACTGTTAACGTCGGAAGAGCTGGAGCTGCAAACCTCGACGTCATCCAGGAGGTCGAGTACGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGTCTGCAGAAAACTCCACCTCCGGTGTTGATATTTTGTGAGAATAAAGCCGATGTTGACGACATTCACGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTGGCAATACATGGAGGAAAAGATCAGGAAGAAAGAGAGTATGCTATCTCTTCATTTAAGGCGAGCAAGAAAGATGTATTGGTTGCTACTGATGTTGCATCAAAGGGTTTAGATTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTACGTTCATAGGATTGGACGAACTGGACGGTGTGGTAAGACGGGAATTGCAACAACTTTCATAAACAAGAATCAAAGCGAAACAACCCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTGTTGGCTGAGCTGAATGACCCTATGGAGGACGTGGAAGCGATCACCAATGCAAGCGGGGTCAAAGGTTGCGCTTATTGTGGCGGGCTTGGTCACCGTATCCGTGACTGCCCCAAGTTAGAGCATCAGAAAAGCATGGCGATTGCAAGTTCAAGAAGAGACTATTTTGGATCAGGCGGCTATAGAGGAGAAATTTGAGAAAGCTAAGAACAGAGGAAGGGACAATGACACATGATCGAGAATCGGTGTCGATTAACCTTACTATGGATATCACTGATTGACAGTCTTTACAAATGATGACAAAAGAGAAGGGCCTGCTGAAAAAAGAGAGTATAAAATCTTGTCTTCCATCAGAACTTTCTGCAACAGAGATGAACTGAAGCAGATATGTGCATTCAGATAACGATGAATTGGAGAAGCAACACAGATGCGAAATATCGAACAAGCAACACAGATGCGAAATATCGAACGAAAGGAAAGAAGACGCCATGCCTCTCTCTGCTCGTCGGAGATGAATGAATTAGACGAATCCCCAAGCACTTCAATGATGTCGTTGAAAGACACCTTCCCGTTGCAGTCAACATCATATAGCTTGAAAATAACTGAAATAAGGAGACACTAGCAATTATTAATACGAAATGAACCATCTCAAAGTAGTTTTCTTAGAGTCAATATCATGTATTAATGTCAGTTCAGGACAAAAAGTTTTTCCATTTAGTCCTGAACTTATAATTCA

Coding sequence (CDS)

AAGCATAACACTCCTAACCAGAAAATTTGGTTCCGCCGCCGGCTGAGCGACGGTGTTACACGGGCTTCAGACCCTTTTGCGTCTTTTTTGTTTCTGCCGACTAGAGCGGCCGCCGGGTTAGCGGAGAGGTGTTTTGGGATTGAATTTCATTATACGATGGATTTACAAATGAAGGACGAAAAGAGCTTGGAAGAAGAAGAAGATGATTTTGTTGAATATGTTCCTGTGGCAAAGCGTAGAGCCATGGAAGCTCAAAAGATTCTTATGCGCAAAGGCAAGGCTTCTGCCCTTGAAGAAGAGTTGGAGAAATCAAGGCTTGCCGAAGCCAAGCCGAGTCTCCTCGTAAAAGCATCTCAGATGAAGCGTGACCAACCAGAAGTTAGTCCGACCGAGCAGATCGTTCAGCAAGAGAAGGAGATGATCGAGCACTTATCTGATCGTAAAACTCTAATGTCGGTTCGTGAACTAGCCAAAGGAATTACTTACACAGAGCCATTGTTAACTGGATGGAAACCACCATTGCCTATCAGGAGGATGTCAAGAAAGGCATGTGATTTGATTCGCAAACAATGGCACATAATAGTCGATGGTGACGATATTCCACCGCCTATTAAGAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAGTTGAAAGAAAAGGGAATCGTGCAGCCGACTCCGATTCAGGTCCAAGGTCTGCCTGTGATTTTATCTGGCAGAGATATGATTGGGATTGCGTTTACTGGTTCGGGAAAGACCCTAGTTTTCGTTCTTCCTTTGATAATGATTGCGTTACAAGAAGAGGTCATGATGCCCATTGTTTCAGGGGAAGGACCTTTTGGTTTGATCATTTGTCCTTCAAGGGAGCTTGCTAGACAGACCTATGAAGTGGTGGAACAGTTCTTAATACCCATGAAGGAGGCTGGATATCCAGAACTTAGGCCTTTGCTCTGTATAGGCGGGGTGGATATGCGATCACAGATCGAGGTTGTGAAGAAGGGTGTTCATATCGTTGTTGCAACCCCCGGCAGGTTGAAGGATATGTTGGCGAAAAAGAAAATGAACCTTGACAATTGCAGGTATCTTACTTTAGATGAGGCTGATAGATTAGTGGATCTAGGATTCGAAGACGATATTCGGGAAGTTTTTGATCATTTCAAGGCTCAACGCCAAACTCTATTGTTTTCTGCTACAATGCCTACCAAAATTCAAAACTTTGCAAGAAGTGCACTAGTAAAGCCTGTCACTGTTAACGTCGGAAGAGCTGGAGCTGCAAACCTCGACGTCATCCAGGAGGTCGAGTACGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGTCTGCAGAAAACTCCACCTCCGGTGTTGATATTTTGTGAGAATAAAGCCGATGTTGACGACATTCACGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTGGCAATACATGGAGGAAAAGATCAGGAAGAAAGAGAGTATGCTATCTCTTCATTTAAGGCGAGCAAGAAAGATGTATTGGTTGCTACTGATGTTGCATCAAAGGGTTTAGATTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTACGTTCATAGGATTGGACGAACTGGACGGTGTGGTAAGACGGGAATTGCAACAACTTTCATAAACAAGAATCAAAGCGAAACAACCCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTGTTGGCTGAGCTGAATGACCCTATGGAGGACGTGGAAGCGATCACCAATGCAAGCGGGGTCAAAGGTTGCGCTTATTGTGGCGGGCTTGGTCACCGTATCCGTGACTGCCCCAAGTTAGAGCATCAGAAAAGCATGGCGATTGCAAGTTCAAGAAGAGACTATTTTGGATCAGGCGGCTATAGAGGAGAAATTTGA

Protein sequence

KHNTPNQKIWFRRRLSDGVTRASDPFASFLFLPTRAAAGLAERCFGIEFHYTMDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI

Homology

[Close]

BLAST of Carg09602 vs. NCBI nr
Match: KAG7014154.1 (DEAD-box ATP-dependent RNA helicase 35, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1282.7 bits (3318), Expect = 0.0e+00
Identity = 650/650 (100.00%), Postives = 650/650 (100.00%), Query Frame = 0


Query: 1   KHNTPNQKIWFRRRLSDGVTRASDPFASFLFLPTRAAAGLAERCFGIEFHYTMDLQMKDE 60
           KHNTPNQKIWFRRRLSDGVTRASDPFASFLFLPTRAAAGLAERCFGIEFHYTMDLQMKDE
Sbjct: 1   KHNTPNQKIWFRRRLSDGVTRASDPFASFLFLPTRAAAGLAERCFGIEFHYTMDLQMKDE 60

Query: 61  KSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQM 120
           KSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQM
Sbjct: 61  KSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQM 120

Query: 121 KRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMS 180
           KRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMS
Sbjct: 121 KRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMS 180

Query: 181 RKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVIL 240
           RKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVIL
Sbjct: 181 RKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVIL 240

Query: 241 SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV 300
           SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV
Sbjct: 241 SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV 300

Query: 301 VEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLD 360
           VEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLD
Sbjct: 301 VEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLD 360

Query: 361 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 420
           NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV
Sbjct: 361 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 420

Query: 421 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 480
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG
Sbjct: 421 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 480

Query: 481 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 540
           VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 481 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 540

Query: 541 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAI 600
           VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAI
Sbjct: 541 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAI 600

Query: 601 TNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           TNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 601 TNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 650

[Close]

BLAST of Carg09602 vs. NCBI nr
Match: XP_022953692.1 (DEAD-box ATP-dependent RNA helicase 35 [Cucurbita moschata])

HSP 1 Score: 1173.7 bits (3035), Expect = 0.0e+00
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 0


Query: 53  MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 112
           MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS
Sbjct: 1   MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 60

Query: 113 LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 172
           LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 61  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 120

Query: 173 PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 232
           PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 121 PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 180

Query: 233 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 292
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 181 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 240

Query: 293 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 352
           LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML
Sbjct: 241 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 300

Query: 353 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 412
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 301 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 360

Query: 413 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 472
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 361 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 420

Query: 473 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 532
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 421 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 480

Query: 533 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 592
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 481 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 540

Query: 593 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598

[Close]

BLAST of Carg09602 vs. NCBI nr
Match: XP_023548804.1 (DEAD-box ATP-dependent RNA helicase 35-like [Cucurbita pepo subsp. pepo] >XP_023548805.1 DEAD-box ATP-dependent RNA helicase 35-like [Cucurbita pepo subsp. pepo] >XP_023548806.1 DEAD-box ATP-dependent RNA helicase 35-like [Cucurbita pepo subsp. pepo] >XP_023548807.1 DEAD-box ATP-dependent RNA helicase 35-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1169.8 bits (3025), Expect = 0.0e+00
Identity = 596/598 (99.67%), Postives = 597/598 (99.83%), Query Frame = 0


Query: 53  MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 112
           MD+QMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS
Sbjct: 1   MDVQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 60

Query: 113 LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 172
           LLVKAS MKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 61  LLVKASLMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 120

Query: 173 PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 232
           PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 121 PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 180

Query: 233 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 292
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 181 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 240

Query: 293 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 352
           LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML
Sbjct: 241 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 300

Query: 353 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 412
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 301 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 360

Query: 413 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 472
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 361 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 420

Query: 473 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 532
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 421 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 480

Query: 533 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 592
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 481 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 540

Query: 593 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598

[Close]

BLAST of Carg09602 vs. NCBI nr
Match: KAG6575611.1 (DEAD-box ATP-dependent RNA helicase 35, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 594/594 (100.00%), Postives = 594/594 (100.00%), Query Frame = 0


Query: 57  MKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVK 116
           MKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVK
Sbjct: 1   MKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVK 60

Query: 117 ASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPI 176
           ASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPI
Sbjct: 61  ASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPI 120

Query: 177 RRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGL 236
           RRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGL
Sbjct: 121 RRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGL 180

Query: 237 PVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQ 296
           PVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQ
Sbjct: 181 PVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQ 240

Query: 297 TYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKK 356
           TYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKK
Sbjct: 241 TYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKK 300

Query: 357 MNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVK 416
           MNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVK
Sbjct: 301 MNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVK 360

Query: 417 PVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYL 476
           PVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYL
Sbjct: 361 PVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYL 420

Query: 477 LLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAE 536
           LLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAE
Sbjct: 421 LLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAE 480

Query: 537 IENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMED 596
           IENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMED
Sbjct: 481 IENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMED 540

Query: 597 VEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           VEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 VEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 594

[Close]

BLAST of Carg09602 vs. NCBI nr
Match: XP_008461142.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo] >XP_008461143.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo] >KAA0058735.1 DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo var. makuwa])

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 592/598 (99.00%), Postives = 596/598 (99.67%), Query Frame = 0


Query: 53  MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 112
           MD+QMKDEKSL EEEDD+VEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS
Sbjct: 1   MDVQMKDEKSL-EEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 60

Query: 113 LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 172
           LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 61  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 120

Query: 173 PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 232
           PLPIRRM +KACDLIRKQWHIIVDGD+IPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 121 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 180

Query: 233 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 292
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 181 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 240

Query: 293 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 352
           LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML
Sbjct: 241 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 300

Query: 353 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 412
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 301 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 360

Query: 413 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 472
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 361 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 420

Query: 473 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 532
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 421 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 480

Query: 533 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 592
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 481 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 540

Query: 593 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 597

[Close]

BLAST of Carg09602 vs. ExPASy Swiss-Prot
Match: Q9LU46 (DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana OX=3702 GN=RH35 PE=2 SV=1)

HSP 1 Score: 1039.3 bits (2686), Expect = 1.9e-302
Identity = 522/590 (88.47%), Postives = 557/590 (94.41%), Query Frame = 0


Query: 61  KSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQM 120
           +S+ EE D ++EYV VA+RRA+ AQKIL RKGKAS LEEE +K +LAEAKPSLLV+A+Q+
Sbjct: 2   ESIMEEADSYIEYVSVAERRAIAAQKILQRKGKASELEEEADKEKLAEAKPSLLVQATQL 61

Query: 121 KRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMS 180
           KRD PEVS TEQI+ QEKEM+EHLSD+KTLMSVRELAKGITYTEPLLTGWKPPL IR+MS
Sbjct: 62  KRDVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRKMS 121

Query: 181 RKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVIL 240
            K  DLIRKQWHIIV+GDDIPPPIKNFKDM+ P PVL  LKEKGIVQPTPIQVQGLPVIL
Sbjct: 122 SKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVIL 181

Query: 241 SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV 300
           +GRDMIGIAFTGSGKTLVFVLP+IMIALQEE+MMPI +GEGP GLI+CPSRELARQTYEV
Sbjct: 182 AGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEV 241

Query: 301 VEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLD 360
           VEQF+ P+ EAGYP LR LLCIGG+DMRSQ+EVVK+GVHIVVATPGRLKDMLAKKKM+LD
Sbjct: 242 VEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLD 301

Query: 361 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 420
            CRYLTLDEADRLVDLGFEDDIREVFDHFK+QRQTLLFSATMPTKIQ FARSALVKPVTV
Sbjct: 302 ACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTV 361

Query: 421 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 480
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKG
Sbjct: 362 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKG 421

Query: 481 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 540
           VEAVAIHGGKDQE+REYAISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 422 VEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 481

Query: 541 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAI 600
           VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPME+ E I
Sbjct: 482 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETI 541

Query: 601 TNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
            NASGVKGCAYCGGLGHRIRDCPKLEHQKS+AI++SR+DYFGSGGYRGEI
Sbjct: 542 ANASGVKGCAYCGGLGHRIRDCPKLEHQKSVAISNSRKDYFGSGGYRGEI 591

[Close]

BLAST of Carg09602 vs. ExPASy Swiss-Prot
Match: Q0E3X4 (DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0150100 PE=2 SV=2)

HSP 1 Score: 973.4 bits (2515), Expect = 1.3e-282
Identity = 487/610 (79.84%), Postives = 543/610 (89.02%), Query Frame = 0


Query: 65  EEEDDFVEYVPVAKRRAMEAQKI-LMRKGK-----ASALEEELE---------------- 124
           ++ED++ EY+PVAKRRAMEA ++  +R  K     +SA E   +                
Sbjct: 18  DDEDNYEEYIPVAKRRAMEADRLRRLRLSKPAPPSSSAAEAASDLPPPPPPPPNQPSAGG 77

Query: 125 --KSRLAEAKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGI 184
                 A AKPSLLVKA+Q+KR  PEV+ TEQ++ QEKEMIEHLSDRKTLMSVRELAKGI
Sbjct: 78  GGGGLEASAKPSLLVKATQLKRAAPEVTHTEQLIMQEKEMIEHLSDRKTLMSVRELAKGI 137

Query: 185 TYTEPLLTGWKPPLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKL 244
           TY++PL TGWKPPL +RRM R   D +R++WHI+VDGDD+PPP ++F+D+RLPEP+L+KL
Sbjct: 138 TYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKL 197

Query: 245 KEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGE 304
           +EKGIVQPTPIQVQGLPV+LSGRDMIGIAFTGSGKTLVFVLPLIM+ALQEE+MMPIV GE
Sbjct: 198 REKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGE 257

Query: 305 GPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHI 364
           GPFG+IICPSRELA+QTY+V+EQFL+P+KEAGYPE+RPLLCIGGVDMR+Q++VVKKGVHI
Sbjct: 258 GPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHI 317

Query: 365 VVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSA 424
           VVATPGRLKD+LAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSA
Sbjct: 318 VVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSA 377

Query: 425 TMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVL 484
           TMP KIQNFA+SALVKPV VNVGRAGAANLDVIQEVEYVK++A+I+YLLECLQKTPPPVL
Sbjct: 378 TMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDARIIYLLECLQKTPPPVL 437

Query: 485 IFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGL 544
           +FCENKADVD IHEYLLLKGVEAVAIHGGKDQEERE AI  FK  KKDVLVATDVASKGL
Sbjct: 438 VFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGL 497

Query: 545 DFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAK 604
           DFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLL+EAK
Sbjct: 498 DFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAK 557

Query: 605 QRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDY 651
           QRIPPVLAELNDP+ED E +   SGVKGCAYCGGLGHR+ DCPKLEHQKSMAIA SRRDY
Sbjct: 558 QRIPPVLAELNDPLEDEETMAKESGVKGCAYCGGLGHRVTDCPKLEHQKSMAIAGSRRDY 617

[Close]

BLAST of Carg09602 vs. ExPASy Swiss-Prot
Match: Q5Z6G5 (DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0697200 PE=3 SV=1)

HSP 1 Score: 896.7 bits (2316), Expect = 1.5e-259
Identity = 452/601 (75.21%), Postives = 520/601 (86.52%), Query Frame = 0


Query: 64  EEEEDDFVEYVPVAKRRAMEAQKILMRKGK-------ASALEEELEKSRLAEA------K 123
           + +E+D+ EYVPVAKRRAMEA++ L R  K       A A      +S  + A      K
Sbjct: 20  DSDEEDYEEYVPVAKRRAMEAER-LRRATKPPTTNAVAVAAPPPPPRSTSSPAVGEVAVK 79

Query: 124 PSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGW 183
            SLLVKA+++KR+ PEV+P E+++QQE+EMIEHLSDRK LM V E+AKGI+Y+EP+ TGW
Sbjct: 80  TSLLVKATKLKREAPEVTPAERLLQQEREMIEHLSDRKALMPVGEIAKGISYSEPITTGW 139

Query: 184 KPPLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTP 243
           +PPL +RRM R   D +R+ WHI+VDGDD+PPP ++F D+RLPEP+L+ L+ KGI +PTP
Sbjct: 140 RPPLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTP 199

Query: 244 IQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPS 303
           IQVQGLPV LSGRDMIGIAFTGSGKTLVFVLPLIM ALQEE++MPIV GEGPFGLI+CPS
Sbjct: 200 IQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPS 259

Query: 304 RELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKD 363
           RELARQT+EV+E FL P+ EAGYPE+RPLLCIGGVDMR+Q+EVVKKGVHIVVATPGRLKD
Sbjct: 260 RELARQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGVHIVVATPGRLKD 319

Query: 364 MLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFA 423
           +L+KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNFA
Sbjct: 320 LLSKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFA 379

Query: 424 RSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVD 483
           +SALVKP+ VNVGRAGAANLDVIQEVEYVK+EA+I+YLLECLQKTPPPVL+FCE+KADVD
Sbjct: 380 KSALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVLVFCEHKADVD 439

Query: 484 DIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVIN 543
            I E+LLLKGVEAVAIHGGKD EER+ A  SFKAS+KDVLVATDVASKGLD PDIQHVIN
Sbjct: 440 YIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVIN 499

Query: 544 YDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 603
           YDMPAEIENYVHRIGRTGR GKTG+ATTFINKNQ+ETTLLDLK LL E+KQR+PP+LA+L
Sbjct: 500 YDMPAEIENYVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRLPPILADL 559

Query: 604 NDPMEDVE-AITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGE 651
           +DP ED + AI   SGVKGCA+CGGLGHRI  CPK + Q S+ +A +R DYFG GGYRGE
Sbjct: 560 DDPQEDDKVAIAQQSGVKGCAFCGGLGHRIEACPKQQLQNSVTLARARSDYFGGGGYRGE 619

[Close]

BLAST of Carg09602 vs. ExPASy Swiss-Prot
Match: Q9SZB4 (Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana OX=3702 GN=RH43 PE=3 SV=1)

HSP 1 Score: 883.6 bits (2282), Expect = 1.3e-255
Identity = 446/586 (76.11%), Postives = 488/586 (83.28%), Query Frame = 0


Query: 65  EEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRDQ 124
           E +D +VEYVPV +R A   +K++   GK                               
Sbjct: 2   EVDDGYVEYVPVEERLAQMKRKVVEEPGKG------------------------------ 61

Query: 125 PEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMSRKAC 184
                          M+EHLSD+K LMSV ELA+GITYTEPL T WKPPL +R+MS K  
Sbjct: 62  ---------------MMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQM 121

Query: 185 DLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRD 244
           DLIRKQWHI V+G+DIPPPIKNF DM+ P P+L+ LK+KGI+ PTPIQVQGLPV+LSGRD
Sbjct: 122 DLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRD 181

Query: 245 MIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQF 304
           MIGIAFTGSGKTLVFVLP+I++ALQEE+MMPI +GEGP  L+ICPSRELA+QTY+VVEQF
Sbjct: 182 MIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQF 241

Query: 305 LIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRY 364
           +  + E GYP LR LLCIGGVDMRSQ++VVKKGVHIVVATPGRLKD+LAKKKM+LD CR 
Sbjct: 242 VASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRL 301

Query: 365 LTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGR 424
           LTLDEADRLVDLGFEDDIR VFDHFK+QRQTLLFSATMP KIQ FA SALVKPVTVNVGR
Sbjct: 302 LTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGR 361

Query: 425 AGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAV 484
           AGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKGVEAV
Sbjct: 362 AGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAV 421

Query: 485 AIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 544
           AIHGGKDQE+R+YAIS FKA KKDVLVATDVASKGLDFPDIQHVINYDMP EIENYVHRI
Sbjct: 422 AIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRI 481

Query: 545 GRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNAS 604
           GRTGRCGKTGIATTFINKNQSE TLLDLKHLLQEAKQRIPPVLAELN PME+ E I NAS
Sbjct: 482 GRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANAS 541

Query: 605 GVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           GVKGCAYCGGLGHRI  CPK EHQKS+AI+SSR+D+FGS GYRGE+
Sbjct: 542 GVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV 542

[Close]

BLAST of Carg09602 vs. ExPASy Swiss-Prot
Match: Q9UJV9 (Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens OX=9606 GN=DDX41 PE=1 SV=2)

HSP 1 Score: 696.4 bits (1796), Expect = 3.0e-199
Identity = 355/591 (60.07%), Postives = 456/591 (77.16%), Query Frame = 0


Query: 64  EEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRL-----------AEAKPS 123
           +E+++D+V YVP+ +RR +  QK+L R+ K +A EE+ +                ++  S
Sbjct: 27  DEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAEEEQQDSGSEPRGDEDDIPLGPQSNVS 86

Query: 124 LLVKASQMKR--DQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGW 183
           LL +   +K   +  + S  E+ +++E++++E +++ + LMSV+E+AKGITY +P+ T W
Sbjct: 87  LLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSW 146

Query: 184 KPPLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTP 243
            PP  +  MS +  + +RK++HI+V+GD IPPPIK+FK+M+ P  +L+ LK+KGI  PTP
Sbjct: 147 TPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTP 206

Query: 244 IQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPS 303
           IQ+QG+P ILSGRDMIGIAFTGSGKTLVF LP+IM  L++E  +P    EGP+GLIICPS
Sbjct: 207 IQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPS 266

Query: 304 RELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKD 363
           RELARQT+ ++E +   ++E   P LR  LCIGG+ ++ Q+E ++ GVH++VATPGRL D
Sbjct: 267 RELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMD 326

Query: 364 MLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFA 423
           +L KK ++LD CRYL LDEADR++D+GFE DIR +F +FK QRQTLLFSATMP KIQNFA
Sbjct: 327 LLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFA 386

Query: 424 RSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVD 483
           +SALVKPVT+NVGRAGAA+LDVIQEVEYVK+EAK+VYLLECLQKTPPPVLIF E KADVD
Sbjct: 387 KSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVD 446

Query: 484 DIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVIN 543
            IHEYLLLKGVEAVAIHGGKDQEER  AI +F+  KKDVLVATDVASKGLDFP IQHVIN
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVIN 506

Query: 544 YDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 603
           YDMP EIENYVHRIGRTGR G TGIATTFINK   E+ L+DLK LL EAKQ++PPVL  L
Sbjct: 507 YDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVL 566

Query: 604 NDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIAS-SRRDY 641
           +      E++ +  G +GCA+CGGLGHRI DCPKLE  ++  +++  R+DY
Sbjct: 567 HC---GDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDY 614

[Close]

BLAST of Carg09602 vs. ExPASy TrEMBL
Match: A0A6J1GNY6 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111456146 PE=3 SV=1)

HSP 1 Score: 1173.7 bits (3035), Expect = 0.0e+00
Identity = 598/598 (100.00%), Postives = 598/598 (100.00%), Query Frame = 0


Query: 53  MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 112
           MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS
Sbjct: 1   MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 60

Query: 113 LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 172
           LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 61  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 120

Query: 173 PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 232
           PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 121 PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 180

Query: 233 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 292
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 181 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 240

Query: 293 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 352
           LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML
Sbjct: 241 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 300

Query: 353 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 412
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 301 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 360

Query: 413 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 472
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 361 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 420

Query: 473 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 532
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 421 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 480

Query: 533 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 592
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 481 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 540

Query: 593 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598

[Close]

BLAST of Carg09602 vs. ExPASy TrEMBL
Match: A0A0A0K6A2 (RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_7G432260 PE=3 SV=1)

HSP 1 Score: 1167.9 bits (3020), Expect = 0.0e+00
Identity = 606/654 (92.66%), Postives = 617/654 (94.34%), Query Frame = 0


Query: 11  FRRRLSDGVTRASDPFASFLFLPTRAAAGLAE-------------RCFGIEFH-YTMDLQ 70
           +R+   +  T    P    LF PTRAA GL +               FG++    TMD+Q
Sbjct: 65  YRKEKGNFGTSERIPKLRCLFPPTRAAPGLLDGDPSSDLTRSGSPSPFGVQREGSTMDVQ 124

Query: 71  MKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVK 130
           MKDEKSL EEED++VEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVK
Sbjct: 125 MKDEKSL-EEEDEYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVK 184

Query: 131 ASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPI 190
           ASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPI
Sbjct: 185 ASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPI 244

Query: 191 RRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGL 250
           RRM +KACDLIRKQWHIIVDGD+IPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGL
Sbjct: 245 RRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGL 304

Query: 251 PVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQ 310
           PVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQ
Sbjct: 305 PVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQ 364

Query: 311 TYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKK 370
           TYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKK
Sbjct: 365 TYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKK 424

Query: 371 MNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVK 430
           MNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVK
Sbjct: 425 MNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVK 484

Query: 431 PVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYL 490
           PVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYL
Sbjct: 485 PVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYL 544

Query: 491 LLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAE 550
           LLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAE
Sbjct: 545 LLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAE 604

Query: 551 IENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMED 610
           IENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMED
Sbjct: 605 IENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMED 664

Query: 611 VEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           VEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 665 VEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 717

[Close]

BLAST of Carg09602 vs. ExPASy TrEMBL
Match: A0A1S3CDK5 (RNA helicase OS=Cucumis melo OX=3656 GN=LOC103499818 PE=3 SV=1)

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 592/598 (99.00%), Postives = 596/598 (99.67%), Query Frame = 0


Query: 53  MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 112
           MD+QMKDEKSL EEEDD+VEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS
Sbjct: 1   MDVQMKDEKSL-EEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 60

Query: 113 LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 172
           LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 61  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 120

Query: 173 PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 232
           PLPIRRM +KACDLIRKQWHIIVDGD+IPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 121 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 180

Query: 233 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 292
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 181 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 240

Query: 293 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 352
           LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML
Sbjct: 241 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 300

Query: 353 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 412
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 301 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 360

Query: 413 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 472
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 361 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 420

Query: 473 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 532
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 421 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 480

Query: 533 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 592
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 481 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 540

Query: 593 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 597

[Close]

BLAST of Carg09602 vs. ExPASy TrEMBL
Match: A0A5A7UYT9 (RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002050 PE=3 SV=1)

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 592/598 (99.00%), Postives = 596/598 (99.67%), Query Frame = 0


Query: 53  MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 112
           MD+QMKDEKSL EEEDD+VEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS
Sbjct: 1   MDVQMKDEKSL-EEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 60

Query: 113 LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 172
           LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 61  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 120

Query: 173 PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 232
           PLPIRRM +KACDLIRKQWHIIVDGD+IPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 121 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 180

Query: 233 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 292
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 181 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 240

Query: 293 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 352
           LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML
Sbjct: 241 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 300

Query: 353 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 412
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 301 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 360

Query: 413 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 472
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 361 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 420

Query: 473 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 532
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 421 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 480

Query: 533 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 592
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 481 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 540

Query: 593 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 597

[Close]

BLAST of Carg09602 vs. ExPASy TrEMBL
Match: A0A6J1KU58 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111497657 PE=3 SV=1)

HSP 1 Score: 1158.7 bits (2996), Expect = 0.0e+00
Identity = 591/598 (98.83%), Postives = 595/598 (99.50%), Query Frame = 0


Query: 53  MDLQMKDEKSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 112
           MD+ MKDEKS+EEEE D+VEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS
Sbjct: 2   MDVVMKDEKSMEEEE-DYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 61

Query: 113 LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 172
           LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 62  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 121

Query: 173 PLPIRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 232
           PLPIRRM RKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 122 PLPIRRMPRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 181

Query: 233 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 292
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 182 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 241

Query: 293 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 352
           LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIE+VKKGVHIVVATPGRLKDML
Sbjct: 242 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEIVKKGVHIVVATPGRLKDML 301

Query: 353 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 412
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 302 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 361

Query: 413 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 472
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 362 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 421

Query: 473 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 532
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 422 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 481

Query: 533 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 592
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 482 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 541

Query: 593 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 542 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598

[Close]

BLAST of Carg09602 vs. TAIR 10
Match: AT5G51280.1 (DEAD-box protein abstrakt, putative )

HSP 1 Score: 1039.3 bits (2686), Expect = 1.3e-303
Identity = 522/590 (88.47%), Postives = 557/590 (94.41%), Query Frame = 0


Query: 61  KSLEEEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQM 120
           +S+ EE D ++EYV VA+RRA+ AQKIL RKGKAS LEEE +K +LAEAKPSLLV+A+Q+
Sbjct: 2   ESIMEEADSYIEYVSVAERRAIAAQKILQRKGKASELEEEADKEKLAEAKPSLLVQATQL 61

Query: 121 KRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMS 180
           KRD PEVS TEQI+ QEKEM+EHLSD+KTLMSVRELAKGITYTEPLLTGWKPPL IR+MS
Sbjct: 62  KRDVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRKMS 121

Query: 181 RKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVIL 240
            K  DLIRKQWHIIV+GDDIPPPIKNFKDM+ P PVL  LKEKGIVQPTPIQVQGLPVIL
Sbjct: 122 SKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVIL 181

Query: 241 SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV 300
           +GRDMIGIAFTGSGKTLVFVLP+IMIALQEE+MMPI +GEGP GLI+CPSRELARQTYEV
Sbjct: 182 AGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEV 241

Query: 301 VEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLD 360
           VEQF+ P+ EAGYP LR LLCIGG+DMRSQ+EVVK+GVHIVVATPGRLKDMLAKKKM+LD
Sbjct: 242 VEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLD 301

Query: 361 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 420
            CRYLTLDEADRLVDLGFEDDIREVFDHFK+QRQTLLFSATMPTKIQ FARSALVKPVTV
Sbjct: 302 ACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTV 361

Query: 421 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 480
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKG
Sbjct: 362 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKG 421

Query: 481 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 540
           VEAVAIHGGKDQE+REYAISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 422 VEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 481

Query: 541 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAI 600
           VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPME+ E I
Sbjct: 482 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETI 541

Query: 601 TNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
            NASGVKGCAYCGGLGHRIRDCPKLEHQKS+AI++SR+DYFGSGGYRGEI
Sbjct: 542 ANASGVKGCAYCGGLGHRIRDCPKLEHQKSVAISNSRKDYFGSGGYRGEI 591

[Close]

BLAST of Carg09602 vs. TAIR 10
Match: AT4G33370.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 883.6 bits (2282), Expect = 9.4e-257
Identity = 446/586 (76.11%), Postives = 488/586 (83.28%), Query Frame = 0


Query: 65  EEEDDFVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRDQ 124
           E +D +VEYVPV +R A   +K++   GK                               
Sbjct: 2   EVDDGYVEYVPVEERLAQMKRKVVEEPGKG------------------------------ 61

Query: 125 PEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMSRKAC 184
                          M+EHLSD+K LMSV ELA+GITYTEPL T WKPPL +R+MS K  
Sbjct: 62  ---------------MMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQM 121

Query: 185 DLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRD 244
           DLIRKQWHI V+G+DIPPPIKNF DM+ P P+L+ LK+KGI+ PTPIQVQGLPV+LSGRD
Sbjct: 122 DLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRD 181

Query: 245 MIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQF 304
           MIGIAFTGSGKTLVFVLP+I++ALQEE+MMPI +GEGP  L+ICPSRELA+QTY+VVEQF
Sbjct: 182 MIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQF 241

Query: 305 LIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRY 364
           +  + E GYP LR LLCIGGVDMRSQ++VVKKGVHIVVATPGRLKD+LAKKKM+LD CR 
Sbjct: 242 VASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRL 301

Query: 365 LTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGR 424
           LTLDEADRLVDLGFEDDIR VFDHFK+QRQTLLFSATMP KIQ FA SALVKPVTVNVGR
Sbjct: 302 LTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGR 361

Query: 425 AGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAV 484
           AGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKGVEAV
Sbjct: 362 AGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAV 421

Query: 485 AIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 544
           AIHGGKDQE+R+YAIS FKA KKDVLVATDVASKGLDFPDIQHVINYDMP EIENYVHRI
Sbjct: 422 AIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRI 481

Query: 545 GRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNAS 604
           GRTGRCGKTGIATTFINKNQSE TLLDLKHLLQEAKQRIPPVLAELN PME+ E I NAS
Sbjct: 482 GRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANAS 541

Query: 605 GVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 651
           GVKGCAYCGGLGHRI  CPK EHQKS+AI+SSR+D+FGS GYRGE+
Sbjct: 542 GVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV 542

[Close]

BLAST of Carg09602 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 303.9 bits (777), Expect = 3.1e-82
Identity = 163/406 (40.15%), Postives = 246/406 (60.59%), Query Frame = 0


Query: 188 RKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIG 247
           RK   I V+G DIP P+K+F+D+  P+ VL+++K+ G  +PTPIQ QG P+ + GRD+IG
Sbjct: 82  RKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIG 141

Query: 248 IAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIP 307
           IA TGSGKTL ++LP I+    + +   +  G+GP  L++ P+RELA Q  +   +F   
Sbjct: 142 IAETGSGKTLSYLLPAIVHVNAQPM---LAHGDGPIVLVLAPTRELAVQIQQEASKF--- 201

Query: 308 MKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTL 367
                  +++     GGV    Q+  ++KGV IV+ATPGRL DM+     NL    YL L
Sbjct: 202 ---GSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVL 261

Query: 368 DEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG- 427
           DEADR++D+GF+  IR++  H +  RQTL +SAT P +++  ++  L  P  V +G +  
Sbjct: 262 DEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDL 321

Query: 428 AANLDVIQEVEYVKQEAKIVYLLECLQ--KTPPPVLIFCENKADVDDIHEYLLLKGVEAV 487
            AN  + Q V+ + +  K   L++ L+       +L+F + K   D I   L + G  A+
Sbjct: 322 KANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPAL 381

Query: 488 AIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 547
           +IHG K Q ER++ +S F++ K  ++ ATDVA++GLD  D+++VINYD P  +E+YVHRI
Sbjct: 382 SIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI 441

Query: 548 GRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 591
           GRTGR G  G A TF     +     +L ++LQEA Q++ P LA +
Sbjct: 442 GRTGRAGAKGTAYTFFTVANARFA-KELTNILQEAGQKVSPELASM 477

[Close]

BLAST of Carg09602 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 296.2 bits (757), Expect = 6.4e-80
Identity = 175/425 (41.18%), Postives = 245/425 (57.65%), Query Frame = 0


Query: 188 RKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIG 247
           R++  I V G D+  P+K F+D      ++  +K++   +PT IQ Q LP++LSGRD+IG
Sbjct: 211 RQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIG 270

Query: 248 IAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIP 307
           IA TGSGKT  FVLP+I+  + +  +      EGP G+I  P+RELA Q +   ++F   
Sbjct: 271 IAKTGSGKTAAFVLPMIVHIMDQPELQ---RDEGPIGVICAPTRELAHQIFLEAKKF--- 330

Query: 308 MKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTL 367
            K  G   LR     GG+    Q + +K G  IVVATPGRL DML  K + +    YL L
Sbjct: 331 SKAYG---LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVL 390

Query: 368 DEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGA 427
           DEADR+ DLGFE  +R +    +  RQTLLFSATMP K++  AR  L  P+ V VG  G 
Sbjct: 391 DEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM 450

Query: 428 ANLDVIQEVEYVKQEA-KIVYLLECL--QKTPPPVLIFCENKADVDDIHEYLLLKGVEAV 487
           AN D+ Q V  +  +A K+ +LLE L        VL+F   KA VD+I   L L   +  
Sbjct: 451 ANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVA 510

Query: 488 AIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 547
           A+HG KDQ  R   +  FK+    VL+ATDVA++GLD   ++ V+NYD+  +++ +VHRI
Sbjct: 511 ALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRI 570

Query: 548 GRTGRCG-KTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 607
           GRTGR G + G+A T + + ++     +L + L  A Q +PP L +L   M+D    +  
Sbjct: 571 GRTGRAGDRDGVAYTLVTQREARFA-GELVNSLVAAGQNVPPELTDL--AMKDGRFKSKR 623

Query: 608 SGVKG 609
            G KG
Sbjct: 631 DGRKG 623

[Close]

BLAST of Carg09602 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 295.4 bits (755), Expect = 1.1e-79
Identity = 170/419 (40.57%), Postives = 247/419 (58.95%), Query Frame = 0


Query: 176 IRRMSRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQG 235
           ++ M+ +   + R +  I V+G D+P P+K F+D   P+ +L+ + + G  +PTPIQ QG
Sbjct: 136 VQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQG 195

Query: 236 LPVILSGRDMIGIAFTGSGKTLVFVLP-LIMIALQEEVMMPIVSGEGPFGLIICPSRELA 295
            P+ L GRD+IGIA TGSGKTL ++LP L+ ++ Q      +   +GP  LI+ P+RELA
Sbjct: 196 WPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPR----LGQDDGPIVLILAPTRELA 255

Query: 296 RQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAK 355
            Q  E   +F +    +G   +R     GG     QI  +++GV IV+ATPGRL DML  
Sbjct: 256 VQIQEESRKFGL---RSG---VRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEC 315

Query: 356 KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSAL 415
           +  NL    YL LDEADR++D+GFE  IR++    +  RQTLL+SAT P +++  AR  L
Sbjct: 316 QHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFL 375

Query: 416 VKPVTVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQK--TPPPVLIFCENKADVDD 475
             P    +G     AN  + Q +E V    K   LL  L++      +LIF E K   D 
Sbjct: 376 RDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQ 435

Query: 476 IHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINY 535
           +   L + G  A+AIHG K Q ER+  ++ FK+ +  ++ ATDVA++GLD  DI+ V+NY
Sbjct: 436 VTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNY 495

Query: 536 DMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 591
           D P  +E+Y+HRIGRTGR G  G+A TF   + ++    +L  +LQEA Q +PP L+ L
Sbjct: 496 DFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFA-RELVKILQEAGQVVPPTLSAL 543

The following BLAST results are available for this feature:

BLAST of Carg09602 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014154.1	0.0e+00	100.00	DEAD-box ATP-dependent RNA helicase 35, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_022953692.1	0.0e+00	100.00	DEAD-box ATP-dependent RNA helicase 35 [Cucurbita moschata]	[more]
XP_023548804.1	0.0e+00	99.67	DEAD-box ATP-dependent RNA helicase 35-like [Cucurbita pepo subsp. pepo] >XP_023...	[more]
KAG6575611.1	0.0e+00	100.00	DEAD-box ATP-dependent RNA helicase 35, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_008461142.1	0.0e+00	99.00	PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo] >XP_008461143.1...	[more]

BLAST of Carg09602 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU46	1.9e-302	88.47	DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana OX=3702 GN=RH35 P...	[more]
Q0E3X4	1.3e-282	79.84	DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q5Z6G5	1.5e-259	75.21	DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9SZB4	1.3e-255	76.11	Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9UJV9	3.0e-199	60.07	Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens OX=9606 GN=DDX41 PE=1 ...	[more]

BLAST of Carg09602 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNY6	0.0e+00	100.00	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111456146 PE=3 SV=1	[more]
A0A0A0K6A2	0.0e+00	92.66	RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_7G432260 PE=3 SV=1	[more]
A0A1S3CDK5	0.0e+00	99.00	RNA helicase OS=Cucumis melo OX=3656 GN=LOC103499818 PE=3 SV=1	[more]
A0A5A7UYT9	0.0e+00	99.00	RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002050 ...	[more]
A0A6J1KU58	0.0e+00	98.83	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111497657 PE=3 SV=1	[more]

BLAST of Carg09602 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51280.1	1.3e-303	88.47	DEAD-box protein abstrakt, putative	[more]
AT4G33370.1	9.4e-257	76.11	DEA(D/H)-box RNA helicase family protein	[more]
AT1G55150.1	3.1e-82	40.15	DEA(D/H)-box RNA helicase family protein	[more]
AT2G47330.1	6.4e-80	41.18	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G63120.2	1.1e-79	40.57	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 562..582
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 71..630
None	No IPR available	PANTHER	PTHR47958:SF79	BNAA06G38640D PROTEIN	coord: 71..630
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 432..560 e-value: 9.99559E-56 score: 183.477
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 224..435 e-value: 6.6E-57 score: 205.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 236..420 score: 30.308105
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 608..624 e-value: 0.0053 score: 25.3
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 608..624 e-value: 2.2E-4 score: 21.2
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 609..624 score: 9.108787
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 470..551 e-value: 5.5E-33 score: 125.6
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 444..551 e-value: 4.4E-30 score: 104.3
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 431..591 score: 23.096851
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 430..592 e-value: 2.2E-55 score: 188.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 174..424 e-value: 3.9E-80 score: 270.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 281..566
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 229..408 e-value: 1.3E-48 score: 165.1
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 205..233 score: 10.800855
IPR044113	DDX41, DEAD-box helicase domain	CDD	cd17951	DEADc_DDX41	coord: 216..421 e-value: 1.62352E-138 score: 400.947
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 608..629

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09602-RA	Carg09602-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding