Carg09568 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09568
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	late embryogenesis abundant protein 7
Location	Carg_Chr17: 6904086 .. 6904685 (-)
RNA-Seq Expression	Carg09568
Synteny	Carg09568

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTATTTGTAAACAATGGCATCCCACAATCAGAGCTACAAAGCTGGTGAAACCAAGGGCCGAGCTGAGGTATTTTCTTTATTTAAAAATGAATTATTTTCTAAATTAATTAATTATTATTATTATTTTAGGAGAAGACTAGTCAGGCGATGGGTACAATGGGGGACAAGGCCCATGGAGCAGCGGAGTCCACGAAAGAATGGGCCAAAGAGTCCAAAGATCAGACAGGAAGCTACATGTCGGATAAGGCCCAAGCGGCCCGAGAGAAGGCCCAATCTGGGAAGGAGACGACCGGAGGGATACTGGAGCAGACGGGCGAGAAAGTGAAGAGTATGGCCCAAGGAGCGGCGGAAGCTGTGAAAAGCACTTTTGGTATGGCCCACGATGATGACGTGGGCAAGGAGGGGACTGGGAGTGACACCACCACTAATCGTAGGGGCTAATTCGTAATTCTGTTGTTGGTTTTTGTTTTTTCTGCATGGTTTGTTGGTGTGTTGTGTTGTGTAACATTTCCCTCCCTTTTTGTTGGAGGTGGTGTTTGGTGGTCTGTATTCCAATAAGAACATCCTTTGTCTTTGCTAGCTCCTATTATCCATCTGC

mRNA sequence

ATCTATTTGTAAACAATGGCATCCCACAATCAGAGCTACAAAGCTGGTGAAACCAAGGGCCGAGCTGAGGAGAAGACTAGTCAGGCGATGGGTACAATGGGGGACAAGGCCCATGGAGCAGCGGAGTCCACGAAAGAATGGGCCAAAGAGTCCAAAGATCAGACAGGAAGCTACATGTCGGATAAGGCCCAAGCGGCCCGAGAGAAGGCCCAATCTGGGAAGGAGACGACCGGAGGGATACTGGAGCAGACGGGCGAGAAAGTGAAGAGTATGGCCCAAGGAGCGGCGGAAGCTGTGAAAAGCACTTTTGGTATGGCCCACGATGATGACGTGGGCAAGGAGGGGACTGGGAGTGACACCACCACTAATCGTAGGGGCTAATTCGTAATTCTGTTGTTGGTTTTTGTTTTTTCTGCATGGTTTGTTGGTGTGTTGTGTTGTGTAACATTTCCCTCCCTTTTTGTTGGAGGTGGTGTTTGGTGGTCTGTATTCCAATAAGAACATCCTTTGTCTTTGCTAGCTCCTATTATCCATCTGC

Coding sequence (CDS)

ATGGCATCCCACAATCAGAGCTACAAAGCTGGTGAAACCAAGGGCCGAGCTGAGGAGAAGACTAGTCAGGCGATGGGTACAATGGGGGACAAGGCCCATGGAGCAGCGGAGTCCACGAAAGAATGGGCCAAAGAGTCCAAAGATCAGACAGGAAGCTACATGTCGGATAAGGCCCAAGCGGCCCGAGAGAAGGCCCAATCTGGGAAGGAGACGACCGGAGGGATACTGGAGCAGACGGGCGAGAAAGTGAAGAGTATGGCCCAAGGAGCGGCGGAAGCTGTGAAAAGCACTTTTGGTATGGCCCACGATGATGACGTGGGCAAGGAGGGGACTGGGAGTGACACCACCACTAATCGTAGGGGCTAA

Protein sequence

MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTTNRRG

Homology

[Close]

BLAST of Carg09568 vs. NCBI nr
Match: KAG7014121.1 (Late embryogenesis abundant protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 225.7 bits (574), Expect = 2.1e-55
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA 60
           MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA 60

Query: 61  AREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTTNRR 120
           AREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTTNRR
Sbjct: 61  AREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTTNRR 120

Query: 121 G 122
           G
Sbjct: 121 G 121

[Close]

BLAST of Carg09568 vs. NCBI nr
Match: XP_022953941.1 (late embryogenesis abundant protein 7 [Cucurbita moschata])

HSP 1 Score: 212.6 bits (540), Expect = 1.9e-51
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA 60
           MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA 60

Query: 61  AREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTTNRR 120
           AREKAQSGKETTGGILEQTGEKVKSMAQGAA+AVKSTFGMAHDDDVGKE  GSDTTT RR
Sbjct: 61  AREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDDDVGKE--GSDTTTYRR 119

Query: 121 G 122
           G
Sbjct: 121 G 119

[Close]

BLAST of Carg09568 vs. NCBI nr
Match: XP_023548700.1 (late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 211.5 bits (537), Expect = 4.2e-51
Identity = 120/139 (86.33%), Postives = 120/139 (86.33%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMG------------------DKAHGAAESTKEW 60
           MASHNQSYKAGETKGRAEEKTSQAMGTMG                  DKAHGAAESTKEW
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 120
           AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH
Sbjct: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 120

Query: 121 DDDVGKEGTGSDTTTNRRG 122
           DDDVGKEGTGSDTTT RRG
Sbjct: 121 DDDVGKEGTGSDTTTYRRG 139

[Close]

BLAST of Carg09568 vs. NCBI nr
Match: KAG6575580.1 (Geranylgeranyl transferase type-2 subunit beta 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.3 bits (495), Expect = 3.1e-46
Identity = 104/106 (98.11%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA 60
           MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWA+ESKDQTGSYMSDKAQA
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWARESKDQTGSYMSDKAQA 60

Query: 61  AREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDV 107
           AREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDD+
Sbjct: 61  AREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDL 106

[Close]

BLAST of Carg09568 vs. NCBI nr
Match: XP_022991581.1 (late embryogenesis abundant protein 7-like [Cucurbita maxima])

HSP 1 Score: 178.3 bits (451), Expect = 3.9e-41
Identity = 101/121 (83.47%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA 60
           MASHN+ YK GE+KGRAEEKTSQAMG MGDKAHGAAES KEWA+E KDQTGSYMSD    
Sbjct: 1   MASHNERYKGGESKGRAEEKTSQAMGRMGDKAHGAAESKKEWAEEPKDQTGSYMSD---- 60

Query: 61  AREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTTNRR 120
              KAQSGKETTGGILEQTGEKVKSMAQGAA+AVKSTFGMAHDDDVGKEGT  D TT RR
Sbjct: 61  ---KAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDDDVGKEGT--DPTTYRR 112

Query: 121 G 122
           G
Sbjct: 121 G 112

[Close]

BLAST of Carg09568 vs. ExPASy Swiss-Prot
Match: Q96270 (Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.3e-19
Identity = 69/158 (43.67%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 1   MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHG------------------------- 60
           MASH  QSYKAGET+G+A+EKT +AMGTMGDK                            
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  ----AAESTKEWAKESKDQTGSYMS-----------DKAQAAREKAQSGKETTGGILEQT 118
               AA++T+E A+ESKD+TGSYMS           D A+  +E A++GKE T GIL QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

[Close]

BLAST of Carg09568 vs. ExPASy Swiss-Prot
Match: P83442 (Late embryogenesis abundant protein Dc3 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.1e-17
Identity = 73/161 (45.34%), Postives = 86/161 (53.42%), Query Frame = 0


Query: 1   MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWA-------KESKDQTGS 60
           MASH +QSYKAGE KG A+EKT Q   TM DKA  A +   E A        ESKDQTGS
Sbjct: 1   MASHQDQSYKAGEPKGHAQEKTGQMADTMKDKAQAAKDKASEMAGSARDRTVESKDQTGS 60

Query: 61  YMSDK-----------AQAAREK----------------------AQSGKETTGGILEQT 120
           Y+SDK           AQAA+EK                      A +GKE TGG++   
Sbjct: 61  YVSDKAGAVKDKTCETAQAAKEKTGGAMQATKEKASEMGESAKETAVAGKEKTGGLMSSA 120

[Close]

BLAST of Carg09568 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-16
Identity = 57/144 (39.58%), Postives = 75/144 (52.08%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYM------ 60
           M SH+QSY+AGE KGR EEKT+Q +G + DKA  A E  ++ A+ +KD+T          
Sbjct: 1   MTSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60

Query: 61  ----------------------------------SDKAQAAREKAQSGKETTGGILEQTG 105
                                             S+  Q+ +E AQSGK+ + G L+QTG
Sbjct: 61  TQQTAQAAKDKTQQTTQATKEKAQDTTGRAKEKGSEMGQSTKETAQSGKDNSAGFLQQTG 120

[Close]

BLAST of Carg09568 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-15
Identity = 66/166 (39.76%), Postives = 81/166 (48.80%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKD---QTGSYMSDK 60
           MASH+QSYKAGET GR EEKT+Q +G + DKA  A E  ++ A+ +KD   QT     +K
Sbjct: 1   MASHDQSYKAGETMGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60

Query: 61  ----AQAAREK------------------------------------------------- 105
               AQAA+EK                                                 
Sbjct: 61  TQQTAQAAKEKTQQTAQAAKDETQQTAQAAKDKTQQTTEATKEKAQDTTGRAREKGSEMG 120

[Close]

BLAST of Carg09568 vs. ExPASy Swiss-Prot
Match: P13939 (Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-15
Identity = 58/123 (47.15%), Postives = 73/123 (59.35%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQT---------- 60
           MASH QSYKAG  +GRA EK  Q   +M +KA  A + T E A+ +K +T          
Sbjct: 1   MASHEQSYKAGRAEGRAHEKGEQMKESMKEKAEAAKQKTMETAEAAKQKTMETAEAAKQK 60

Query: 61  ----GSYMSDK----AQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 106
                   +DK    A AAR KA+  KET+GGIL+Q GEKV++ AQGA +AVK TFGMA 
Sbjct: 61  TRGAAETTNDKTKQTAGAARGKAEETKETSGGILQQAGEKVRNAAQGATDAVKHTFGMAD 120

[Close]

BLAST of Carg09568 vs. ExPASy TrEMBL
Match: A0A6J1GPH8 (late embryogenesis abundant protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111456350 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 9.0e-52
Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA 60
           MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA 60

Query: 61  AREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTTNRR 120
           AREKAQSGKETTGGILEQTGEKVKSMAQGAA+AVKSTFGMAHDDDVGKE  GSDTTT RR
Sbjct: 61  AREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDDDVGKE--GSDTTTYRR 119

Query: 121 G 122
           G
Sbjct: 121 G 119

[Close]

BLAST of Carg09568 vs. ExPASy TrEMBL
Match: A0A6J1JR52 (late embryogenesis abundant protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111488151 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41
Identity = 101/121 (83.47%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSYMSDKAQA 60
           MASHN+ YK GE+KGRAEEKTSQAMG MGDKAHGAAES KEWA+E KDQTGSYMSD    
Sbjct: 1   MASHNERYKGGESKGRAEEKTSQAMGRMGDKAHGAAESKKEWAEEPKDQTGSYMSD---- 60

Query: 61  AREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTTNRR 120
              KAQSGKETTGGILEQTGEKVKSMAQGAA+AVKSTFGMAHDDDVGKEGT  D TT RR
Sbjct: 61  ---KAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAHDDDVGKEGT--DPTTYRR 112

Query: 121 G 122
           G
Sbjct: 121 G 112

[Close]

BLAST of Carg09568 vs. ExPASy TrEMBL
Match: A0A5A7UUB6 (Late embryogenesis abundant protein D-7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002220 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31
Identity = 96/140 (68.57%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMG------------------DKAHGAAESTKEW 60
           MASHNQSY+AGETKGRAEEKT+QAMGTMG                  DKAHGAA+STKEW
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAVKDKAHGAADSTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA- 120
           A           SD AQA REKAQ+GKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA 
Sbjct: 61  A-----------SDTAQAGREKAQTGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAS 120

[Close]

BLAST of Carg09568 vs. ExPASy TrEMBL
Match: A0A1S3CEC9 (late embryogenesis abundant protein D-7 OS=Cucumis melo OX=3656 GN=LOC103499778 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31
Identity = 96/140 (68.57%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMG------------------DKAHGAAESTKEW 60
           MASHNQSY+AGETKGRAEEKT+QAMGTMG                  DKAHGAA+STKEW
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAVKDKAHGAADSTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA- 120
           A           SD AQA REKAQ+GKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA 
Sbjct: 61  A-----------SDTAQAGREKAQTGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAS 120

[Close]

BLAST of Carg09568 vs. ExPASy TrEMBL
Match: A0A0A0K6E1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433250 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.8e-31
Identity = 89/128 (69.53%), Postives = 98/128 (76.56%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAEST-------KEWAKESKDQTGSY 60
           MASHNQSY+AGETKGRAEEKT+QAMG MG+KA  A E T       +E A  + D T  +
Sbjct: 49  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEW 108

Query: 61  MSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA-HDDDVGKEGTG 120
            SD AQ  REKAQ+GKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA HD+DV K    
Sbjct: 109 ASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQHDEDVDK---S 168

[Close]

BLAST of Carg09568 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.4e-20
Identity = 69/158 (43.67%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 1   MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHG------------------------- 60
           MASH  QSYKAGET+G+A+EKT +AMGTMGDK                            
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  ----AAESTKEWAKESKDQTGSYMS-----------DKAQAAREKAQSGKETTGGILEQT 118
               AA++T+E A+ESKD+TGSYMS           D A+  +E A++GKE T GIL QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

[Close]

BLAST of Carg09568 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.4e-20
Identity = 69/158 (43.67%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 1   MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAHG------------------------- 60
           MASH  QSYKAGET+G+A+EKT +AMGTMGDK                            
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  ----AAESTKEWAKESKDQTGSYMS-----------DKAQAAREKAQSGKETTGGILEQT 118
               AA++T+E A+ESKD+TGSYMS           D A+  +E A++GKE T GIL QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

[Close]

BLAST of Carg09568 vs. TAIR 10
Match: AT3G15670.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 57/138 (41.30%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 9   KAGETKGRAEEKTSQAMGTMGDKAHGAAESTKE-------WAKESKDQTGSYMSDKAQAA 68
           KA ET   A+EKTSQ   T   KAH   ++ KE        A+E+KD+ GSY+S+  +A 
Sbjct: 71  KAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEKTSQAGDKAREAKDKAGSYLSETGEAI 130

Query: 69  REKAQ----------------------SGKETTGGILEQTGEKVKSMAQGAAEAVKSTFG 118
           + KAQ                      +G++ TGG L QTGE VK MA GAA+AVK TFG
Sbjct: 131 KNKAQDAAQYTKETAQGAAQYTKETAEAGRDKTGGFLSQTGEHVKQMAMGAADAVKHTFG 190

[Close]

BLAST of Carg09568 vs. TAIR 10
Match: AT4G13560.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 51.6 bits (122), Expect = 5.1e-07
Identity = 33/102 (32.35%), Postives = 55/102 (53.92%), Query Frame = 0


Query: 6   QSYKAGETKGRAEEKTSQAMGTMGDKAHGAAESTKEWAKESKDQTGSY-------MSDKA 65
           Q + AG+ +G+A+EK  Q   +    A  A + T +  + ++D+            +D +
Sbjct: 4   QQFNAGQNRGQAQEKAEQWTESAKQTAQSACDKTADLTQSARDKAADLTQSARDKTADGS 63

Query: 66  QAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM 101
            +A + AQ  +E   G+  QTGE VK+MAQGA + VK++ GM
Sbjct: 64  HSANKSAQHNQEQAAGLFGQTGESVKNMAQGALDGVKNSLGM 105

The following BLAST results are available for this feature:

BLAST of Carg09568 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014121.1	2.1e-55	100.00	Late embryogenesis abundant protein 7 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022953941.1	1.9e-51	96.69	late embryogenesis abundant protein 7 [Cucurbita moschata]	[more]
XP_023548700.1	4.2e-51	86.33	late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo]	[more]
KAG6575580.1	3.1e-46	98.11	Geranylgeranyl transferase type-2 subunit beta 1, partial [Cucurbita argyrosperm...	[more]
XP_022991581.1	3.9e-41	83.47	late embryogenesis abundant protein 7-like [Cucurbita maxima]	[more]

BLAST of Carg09568 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96270	3.3e-19	43.67	Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE...	[more]
P83442	1.1e-17	45.34	Late embryogenesis abundant protein Dc3 OS=Daucus carota OX=4039 PE=2 SV=1	[more]
O49817	1.5e-16	39.58	Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]
O49816	1.0e-15	39.76	Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]
P13939	2.2e-15	47.15	Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]

BLAST of Carg09568 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPH8	9.0e-52	96.69	late embryogenesis abundant protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111456...	[more]
A0A6J1JR52	1.9e-41	83.47	late embryogenesis abundant protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7UUB6	1.4e-31	68.57	Late embryogenesis abundant protein D-7 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CEC9	1.4e-31	68.57	late embryogenesis abundant protein D-7 OS=Cucumis melo OX=3656 GN=LOC103499778 ...	[more]
A0A0A0K6E1	8.8e-31	69.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433250 PE=4 SV=1	[more]

BLAST of Carg09568 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52690.1	2.4e-20	43.67	Late embryogenesis abundant protein (LEA) family protein	[more]
AT1G52690.2	2.4e-20	43.67	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G15670.1	1.5e-14	41.30	Late embryogenesis abundant protein (LEA) family protein	[more]
AT4G13560.1	5.1e-07	32.35	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..51
None	No IPR available	PANTHER	PTHR47372	DAUER UP-REGULATED-RELATED	coord: 30..111 coord: 1..66
None	No IPR available	PANTHER	PTHR47372:SF1	LATE EMBRYOGENESIS ABUNDANT PROTEIN 29-RELATED	coord: 30..111
None	No IPR available	PANTHER	PTHR47372:SF1	LATE EMBRYOGENESIS ABUNDANT PROTEIN 29-RELATED	coord: 1..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09568-RA	Carg09568-RA	mRNA