Carg09554 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09554
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	D-glycerate 3-kinase, chloroplastic isoform X2
Location	Carg_Chr17: 6820971 .. 6822982 (-)
RNA-Seq Expression	Carg09554
Synteny	Carg09554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTCAGCTGCTATCTCAGACTTCAATTTTTTCCTCTGTTTTCTGTAGCAATAGTAATGGCGTTGGTTTTTATAAATTCCGCTCTTCCCCTCACGTCCATCATGTCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGCGATGGGTAAAACCGATCAGTCCATTTCTAGACTCTGTTATTTGGCGACCGATTTGGCGAAATCAGGTATTTTCTTCTCACGACTTAGTTTTGATGAAATACTATTGGTGATTATCAGGTTTTGTCTATTTGGTTCTGTCATATCCTCTGTTTGGCATCTTGGAATGGTTTCTGATGATGGTGAGGAGTAATTGGTTGTCGAATGTTAGGAAGGTTATGAAATGTTCTTCGATTTCGAATGCTGTGCTACTTTTAGGGAGGTTATTTTTATGCGTTTGGCTGTGCAATATTCTCTGTTAATATGGAGGGAAATTGTTGCGACATGTTCTTGGGAATTTGGTTTCATGATGCAAGAATGAAACGTTGTTTTTATTTTTCTGCAATATCATTTGGTTCTAGAAATGGATTCTGTCCATTCTTGGTGTTTGGATGTTTTTGGTTTCTAACGTATAGAGTAATCCCTTTTTCCTTTTATCTTTGTACTCATCAAACTTCGTTATACATTCATCATAGAGATATGACAATCTCTCTAGATTGAGCATTCTTTTTAGATCGTTCTGTTCATGCTTGGAACCTTGTTCCCTTCCGTTTAAGGGACATTCTTATATGAGACTTATGATAGGTAAAAGCATCATAAAATGTAACAGCCCAAGCCCACTGCTAATATTATTTGCTTTGATCCGTTACGTATTGCCGTCAGTCTCATGGTTTTAAAACGCGTATGCTAGGGAAAGATTTCCACACCTTTATAAAGAATGCTTTGTTCTCCTTCGTGAGATTTCACATAAATAGTTTGTAATTTATAGTGAGGTCAGAGAGAGCTAATTCTTGTATTTTATGATGAACTTTTCAATATTTGTAGTGAAGCTTCTATTTATAGTTTCAGAAAGCTGAAGTTCTATTGTTTGATGGCCAATGCTGTTCTACCGTATCTTGTATAGTGTGCTGCGTTCTTAATCATTGATCTCTTCCTTTTACTCTAGGCAATGGATGTTCATGGATTCAAGATAACTCCTCGGGTTGCAGCGTTGCTGCCTCCGACAAGTGTTATCAAGGCACCGTTTGTTATGCATTACCCATGAAACCAGCACAAGTTTCCACTGTGGAGGATCTTTTTGAATTCATATGCTCAGGTCCCTTGATAGAAAAGTTGGGTATGAGCCCTCAAAATGTAGCTGATGCCATAGATAAATGGCTGGCTTATGGTTCTTATCTTTGTCGATTGTTCAAGGTTAATGAAATGGAGCTCACAATTCCCCAGAAAGCAAGATTTTACCATTACTATATACCTGTGTTTTTTTGGTGTGAGGATCAAATATCTCAACACCATTCCTCATTTAAAGAAGAAGAAGAGATACCTCCCTTAGTGGTAAGCTTTAATCTCATTGCAAACCTGCTTATAATTATTATTTGATGTTCTTCCGCTTTGAGGAATTAAGATGTTTCGCACGAGGCTAAGCTTTCATGGACGTTCTTTACTCGTGGCCTATTAATTACGCTGGCTATTACTATCAGAGCTAAATTTTCTTTATTCCTCTGACTACTTGTCTTCAAACCACTTATTGGTGCTTGTGTAGATAGGATTTAGCGCTCCGCAAGGTTGTGGCAAGACGACACTCGTGTATGCTCTCAATTATCTTTTCGAAGTAACAGGCAGGTAGGCTGCGATGCTAGTAAATTTACCATAAAGAGAGCTGAGTATCTGCTGAAGCAGTGACTGAATTTCTGACTGAAGTTCTATCTCAGGAAGTCTGCTATGTTATCCATTGATGACTTCTATCTCACAGCTGAAGGGCAGGTTGGTTTGCCATCTATGATGTTGTTAGCATTTCCTTTCCGTTTGCAGAACTCTTAA

mRNA sequence

ATGGCAACTCAGCTGCTATCTCAGACTTCAATTTTTTCCTCTGTTTTCTGTAGCAATAGTAATGGCGTTGGTTTTTATAAATTCCGCTCTTCCCCTCACGTCCATCATGTCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGCGATGGGTAAAACCGATCAGTCCATTTCTAGACTCTGTTATTTGGCGACCGATTTGGCGAAATCAGGTATTTTCTTCTCACGACTTAGTTTTGATGAAATACTATTGGTGATTATCAGGTTTTGTCTATTTGGTTCTGTCATATCCTCTGTTTGGCATCTTGGAATGGTTTCTGATGATGGCAATGGATGTTCATGGATTCAAGATAACTCCTCGGGTTGCAGCGTTGCTGCCTCCGACAAGTGTTATCAAGGCACCGTTTGTTATGCATTACCCATGAAACCAGCACAAGTTTCCACTGTGGAGGATCTTTTTGAATTCATATGCTCAGGTCCCTTGATAGAAAAGTTGGGTATGAGCCCTCAAAATGTAGCTGATGCCATAGATAAATGGCTGGCTTATGGTTCTTATCTTTGTCGATTGTTCAAGGTTAATGAAATGGAGCTCACAATTCCCCAGAAAGCAAGATTTTACCATTACTATATACCTGTGTTTTTTTGGTGTGAGGATCAAATATCTCAACACCATTCCTCATTTAAAGAAGAAGAAGAGATACCTCCCTTAGTGATAGGATTTAGCGCTCCGCAAGGTTGTGGCAAGACGACACTCGTGTATGCTCTCAATTATCTTTTCGAAGTAACAGGCAGGAAGTCTGCTATGTTATCCATTGATGACTTCTATCTCACAGCTGAAGGGCAGGTTGGTTTGCCATCTATGATGTTGTTAGCATTTCCTTTCCGTTTGCAGAACTCTTAA

Coding sequence (CDS)

ATGGCAACTCAGCTGCTATCTCAGACTTCAATTTTTTCCTCTGTTTTCTGTAGCAATAGTAATGGCGTTGGTTTTTATAAATTCCGCTCTTCCCCTCACGTCCATCATGTCTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTGCGATGGGTAAAACCGATCAGTCCATTTCTAGACTCTGTTATTTGGCGACCGATTTGGCGAAATCAGGTATTTTCTTCTCACGACTTAGTTTTGATGAAATACTATTGGTGATTATCAGGTTTTGTCTATTTGGTTCTGTCATATCCTCTGTTTGGCATCTTGGAATGGTTTCTGATGATGGCAATGGATGTTCATGGATTCAAGATAACTCCTCGGGTTGCAGCGTTGCTGCCTCCGACAAGTGTTATCAAGGCACCGTTTGTTATGCATTACCCATGAAACCAGCACAAGTTTCCACTGTGGAGGATCTTTTTGAATTCATATGCTCAGGTCCCTTGATAGAAAAGTTGGGTATGAGCCCTCAAAATGTAGCTGATGCCATAGATAAATGGCTGGCTTATGGTTCTTATCTTTGTCGATTGTTCAAGGTTAATGAAATGGAGCTCACAATTCCCCAGAAAGCAAGATTTTACCATTACTATATACCTGTGTTTTTTTGGTGTGAGGATCAAATATCTCAACACCATTCCTCATTTAAAGAAGAAGAAGAGATACCTCCCTTAGTGATAGGATTTAGCGCTCCGCAAGGTTGTGGCAAGACGACACTCGTGTATGCTCTCAATTATCTTTTCGAAGTAACAGGCAGGAAGTCTGCTATGTTATCCATTGATGACTTCTATCTCACAGCTGAAGGGCAGGTTGGTTTGCCATCTATGATGTTGTTAGCATTTCCTTTCCGTTTGCAGAACTCTTAA

Protein sequence

MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQSISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQDNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAIDKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPLVIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGLPSMMLLAFPFRLQNS

Homology

[Close]

BLAST of Carg09554 vs. NCBI nr
Match: KAG7014107.1 (D-glycerate 3-kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 606.3 bits (1562), Expect = 1.5e-169
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGLPSMMLLAFPFRL 300
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGLPSMMLLAFPFRL
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGLPSMMLLAFPFRL 300

Query: 301 QNS 304
           QNS
Sbjct: 301 QNS 303

[Close]

BLAST of Carg09554 vs. NCBI nr
Match: KAG6575565.1 (D-glycerate 3-kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 472.6 bits (1215), Expect = 2.5e-129
Identity = 245/288 (85.07%), Postives = 245/288 (85.07%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSV   SSSSSSSSSFAMGKTDQS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSV---SSSSSSSSSFAMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 247

[Close]

BLAST of Carg09554 vs. NCBI nr
Match: XP_022954058.1 (D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 465.7 bits (1197), Expect = 3.1e-127
Identity = 240/288 (83.33%), Postives = 240/288 (83.33%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSV        SSSSFAMGKTDQS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSV--------SSSSFAMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 242

[Close]

BLAST of Carg09554 vs. NCBI nr
Match: XP_022954057.1 (D-glycerate 3-kinase, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 465.7 bits (1197), Expect = 3.1e-127
Identity = 240/288 (83.33%), Postives = 240/288 (83.33%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSV        SSSSFAMGKTDQS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSV--------SSSSFAMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 242

[Close]

BLAST of Carg09554 vs. NCBI nr
Match: XP_023549187.1 (D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 461.5 bits (1186), Expect = 5.8e-126
Identity = 241/288 (83.68%), Postives = 241/288 (83.68%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60
           MATQLLSQTSI SSVFCSN NGVGFYKFRSSPHVHHVSV   SSSSSSSSSFAMGKTDQS
Sbjct: 1   MATQLLSQTSILSSVFCSNRNGVGFYKFRSSPHVHHVSV---SSSSSSSSSFAMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSG SVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGRSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHS FKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSLFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 247

[Close]

BLAST of Carg09554 vs. ExPASy Swiss-Prot
Match: Q944I4 (D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLYK PE=1 SV=2)

HSP 1 Score: 243.8 bits (621), Expect = 2.5e-63
Identity = 116/177 (65.54%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 115 GCSWIQDNSSGCSVAASDKCYQGTV--CYALP-MKPAQVSTVEDLFEFICSGPLIEKLGM 174
           GCSWIQDNS     A +     GT   C ALP      VS+V DLFEFICSGPL+ K+G+
Sbjct: 84  GCSWIQDNSMVHDYATTT---NGTSKRCSALPTTNTVDVSSVSDLFEFICSGPLVNKIGI 143

Query: 175 SPQNVADAIDKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSF 234
           +PQ V  +IDKWL YGS LCRLF++NE++LTIPQKAR YHYYIPVF WCEDQI+ H+S F
Sbjct: 144 TPQRVGQSIDKWLLYGSQLCRLFQLNELKLTIPQKARLYHYYIPVFIWCEDQIALHNSKF 203

Query: 235 KEEEEIPPLVIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           K+ +++PPLVIGFSAPQGCGKTTLV+AL+YLF+ T +KSA +S+DDFYLTAEGQ  L
Sbjct: 204 KDGDDVPPLVIGFSAPQGCGKTTLVFALDYLFKTTKKKSATISVDDFYLTAEGQAEL 257

[Close]

BLAST of Carg09554 vs. ExPASy TrEMBL
Match: A0A6J1GQ19 (D-glycerate 3-kinase, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456433 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127
Identity = 240/288 (83.33%), Postives = 240/288 (83.33%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSV        SSSSFAMGKTDQS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSV--------SSSSFAMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 242

[Close]

BLAST of Carg09554 vs. ExPASy TrEMBL
Match: A0A6J1GPZ0 (D-glycerate 3-kinase, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456433 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127
Identity = 240/288 (83.33%), Postives = 240/288 (83.33%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSV        SSSSFAMGKTDQS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSV--------SSSSFAMGKTDQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLATDLAKS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLATDLAKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 242

[Close]

BLAST of Carg09554 vs. ExPASy TrEMBL
Match: A0A6J1JPA4 (D-glycerate 3-kinase, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488631 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.0e-124
Identity = 235/288 (81.60%), Postives = 238/288 (82.64%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPH+HHVSV       SSSSSFAMGKT+QS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHIHHVSV-------SSSSSFAMGKTNQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLA DL KS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLAADLVKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSG SVAASD+CYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGRSVAASDECYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 243

[Close]

BLAST of Carg09554 vs. ExPASy TrEMBL
Match: A0A6J1JT25 (D-glycerate 3-kinase, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488631 PE=4 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 2.0e-124
Identity = 235/288 (81.60%), Postives = 238/288 (82.64%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60
           MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPH+HHVSV       SSSSSFAMGKT+QS
Sbjct: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHIHHVSV-------SSSSSFAMGKTNQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
           ISRLCYLA DL KS                                      GNGCSWIQ
Sbjct: 61  ISRLCYLAADLVKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNSSG SVAASD+CYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI
Sbjct: 121 DNSSGRSVAASDECYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQTQL 243

[Close]

BLAST of Carg09554 vs. ExPASy TrEMBL
Match: A0A0A0K6H4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G435550 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 6.5e-107
Identity = 212/300 (70.67%), Postives = 225/300 (75.00%), Query Frame = 0


Query: 1   MATQLLSQTSIFSSVFCSNSNGVGFYKFRSSPHVHHVSVSSSSSSSSSSSSFAMGKTDQS 60
           MATQLLS T  F S+FCSNSNGVGFYKF SSP+ HHVSV       SSSSSF M KT+QS
Sbjct: 1   MATQLLSPTITFPSLFCSNSNGVGFYKFHSSPYSHHVSV-------SSSSSFPMAKTNQS 60

Query: 61  ISRLCYLATDLAKSGIFFSRLSFDEILLVIIRFCLFGSVISSVWHLGMVSDDGNGCSWIQ 120
            SRLCYL T L KS                                      GNGCSWIQ
Sbjct: 61  TSRLCYLQTHLPKS--------------------------------------GNGCSWIQ 120

Query: 121 DNSSGCSVAASDKCYQGTVCYALPMKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAI 180
           DNS   +V+AS+ CY+G++CY+LP KPAQVSTVEDLFEFICSGPLIEKLG+SP++VADAI
Sbjct: 121 DNSLFHNVSASE-CYRGSICYSLPTKPAQVSTVEDLFEFICSGPLIEKLGLSPESVADAI 180

Query: 181 DKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPL 240
           DKWLAYGSYLCRLFK NEMELTIPQKARFYHYYIPVFFWCEDQISQH SSFKE EEIPPL
Sbjct: 181 DKWLAYGSYLCRLFKANEMELTIPQKARFYHYYIPVFFWCEDQISQHQSSFKEGEEIPPL 240

Query: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL----PSMMLLAF 297
           VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQ  L    P   LL F
Sbjct: 241 VIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQAQLRERNPGNALLEF 254

[Close]

BLAST of Carg09554 vs. TAIR 10
Match: AT1G80380.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 243.8 bits (621), Expect = 1.8e-64
Identity = 116/177 (65.54%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 115 GCSWIQDNSSGCSVAASDKCYQGTV--CYALP-MKPAQVSTVEDLFEFICSGPLIEKLGM 174
           GCSWIQDNS     A +     GT   C ALP      VS+V DLFEFICSGPL+ K+G+
Sbjct: 84  GCSWIQDNSMVHDYATTT---NGTSKRCSALPTTNTVDVSSVSDLFEFICSGPLVNKIGI 143

Query: 175 SPQNVADAIDKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSF 234
           +PQ V  +IDKWL YGS LCRLF++NE++LTIPQKAR YHYYIPVF WCEDQI+ H+S F
Sbjct: 144 TPQRVGQSIDKWLLYGSQLCRLFQLNELKLTIPQKARLYHYYIPVFIWCEDQIALHNSKF 203

Query: 235 KEEEEIPPLVIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           K+ +++PPLVIGFSAPQGCGKTTLV+AL+YLF+ T +KSA +S+DDFYLTAEGQ  L
Sbjct: 204 KDGDDVPPLVIGFSAPQGCGKTTLVFALDYLFKTTKKKSATISVDDFYLTAEGQAEL 257

[Close]

BLAST of Carg09554 vs. TAIR 10
Match: AT1G80380.4 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 243.8 bits (621), Expect = 1.8e-64
Identity = 116/177 (65.54%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 115 GCSWIQDNSSGCSVAASDKCYQGTV--CYALP-MKPAQVSTVEDLFEFICSGPLIEKLGM 174
           GCSWIQDNS     A +     GT   C ALP      VS+V DLFEFICSGPL+ K+G+
Sbjct: 84  GCSWIQDNSMVHDYATTT---NGTSKRCSALPTTNTVDVSSVSDLFEFICSGPLVNKIGI 143

Query: 175 SPQNVADAIDKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSF 234
           +PQ V  +IDKWL YGS LCRLF++NE++LTIPQKAR YHYYIPVF WCEDQI+ H+S F
Sbjct: 144 TPQRVGQSIDKWLLYGSQLCRLFQLNELKLTIPQKARLYHYYIPVFIWCEDQIALHNSKF 203

Query: 235 KEEEEIPPLVIGFSAPQGCGKTTLVYALNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           K+ +++PPLVIGFSAPQGCGKTTLV+AL+YLF+ T +KSA +S+DDFYLTAEGQ  L
Sbjct: 204 KDGDDVPPLVIGFSAPQGCGKTTLVFALDYLFKTTKKKSATISVDDFYLTAEGQAEL 257

[Close]

BLAST of Carg09554 vs. TAIR 10
Match: AT1G80380.3 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 232.3 bits (591), Expect = 5.3e-61
Identity = 104/150 (69.33%), Postives = 126/150 (84.00%), Query Frame = 0


Query: 140 CYALP-MKPAQVSTVEDLFEFICSGPLIEKLGMSPQNVADAIDKWLAYGSYLCRLFKVNE 199
           C ALP      VS+V DLFEFICSGPL+ K+G++PQ V  +IDKWL YGS LCRLF++NE
Sbjct: 16  CSALPTTNTVDVSSVSDLFEFICSGPLVNKIGITPQRVGQSIDKWLLYGSQLCRLFQLNE 75

Query: 200 MELTIPQKARFYHYYIPVFFWCEDQISQHHSSFKEEEEIPPLVIGFSAPQGCGKTTLVYA 259
           ++LTIPQKAR YHYYIPVF WCEDQI+ H+S FK+ +++PPLVIGFSAPQGCGKTTLV+A
Sbjct: 76  LKLTIPQKARLYHYYIPVFIWCEDQIALHNSKFKDGDDVPPLVIGFSAPQGCGKTTLVFA 135

Query: 260 LNYLFEVTGRKSAMLSIDDFYLTAEGQVGL 289
           L+YLF+ T +KSA +S+DDFYLTAEGQ  L
Sbjct: 136 LDYLFKTTKKKSATISVDDFYLTAEGQAEL 165

[Close]

BLAST of Carg09554 vs. TAIR 10
Match: AT1G80380.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 162.5 bits (410), Expect = 5.2e-40
Identity = 77/127 (60.63%), Postives = 94/127 (74.02%), Query Frame = 0


Query: 115 GCSWIQDNSSGCSVAASDKCYQGTV--CYALP-MKPAQVSTVEDLFEFICSGPLIEKLGM 174
           GCSWIQDNS     A +     GT   C ALP      VS+V DLFEFICSGPL+ K+G+
Sbjct: 84  GCSWIQDNSMVHDYATTT---NGTSKRCSALPTTNTVDVSSVSDLFEFICSGPLVNKIGI 143

Query: 175 SPQNVADAIDKWLAYGSYLCRLFKVNEMELTIPQKARFYHYYIPVFFWCEDQISQHHSSF 234
           +PQ V  +IDKWL YGS LCRLF++NE++LTIPQKAR YHYYIPVF WCEDQI+ H+S F
Sbjct: 144 TPQRVGQSIDKWLLYGSQLCRLFQLNELKLTIPQKARLYHYYIPVFIWCEDQIALHNSKF 203

Query: 235 KEEEEIP 239
           K+ +++P
Sbjct: 204 KDGDDVP 207

The following BLAST results are available for this feature:

BLAST of Carg09554 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014107.1	1.5e-169	100.00	D-glycerate 3-kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6575565.1	2.5e-129	85.07	D-glycerate 3-kinase, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022954058.1	3.1e-127	83.33	D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita moschata]	[more]
XP_022954057.1	3.1e-127	83.33	D-glycerate 3-kinase, chloroplastic isoform X1 [Cucurbita moschata]	[more]
XP_023549187.1	5.8e-126	83.68	D-glycerate 3-kinase, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg09554 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q944I4	2.5e-63	65.54	D-glycerate 3-kinase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLYK PE=1...	[more]

BLAST of Carg09554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQ19	1.5e-127	83.33	D-glycerate 3-kinase, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1GPZ0	1.5e-127	83.33	D-glycerate 3-kinase, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JPA4	2.0e-124	81.60	D-glycerate 3-kinase, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1JT25	2.0e-124	81.60	D-glycerate 3-kinase, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0K6H4	6.5e-107	70.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G435550 PE=4 SV=1	[more]

BLAST of Carg09554 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80380.2	1.8e-64	65.54	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G80380.4	1.8e-64	65.54	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G80380.3	5.3e-61	69.33	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G80380.1	5.2e-40	60.63	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 192..294 e-value: 2.8E-14 score: 54.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 238..285
None	No IPR available	PANTHER	PTHR10285	URIDINE KINASE	coord: 116..288
None	No IPR available	PANTHER	PTHR10285:SF178	BNAC06G40610D PROTEIN	coord: 116..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09554-RA	Carg09554-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009853	photorespiration
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0008887	glycerate kinase activity