Carg09552 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg09552
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Auxin-responsive protein
Location	Carg_Chr17: 6816998 .. 6818983 (+)
RNA-Seq Expression	Carg09552
Synteny	Carg09552

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGTCCTTAACGGTGTCTTAGGGAGCATCAAGACCCCACCTTTGTTCCTCGTCTCCTTAGTTGACCTGTCATTGTTTCCCACTTCCTTCTTCTATATATCCCTTTTCCCTTTTCATTTTCCCATTCTAAACACAAAAAAAAAACACCCATTCTTCCATCAAATGGCAAACGAATCCCTCGGGCTCGAGATCACCGAGCTTCGCCTAGGTCTCCCTGGCAACAACGACAAAAACGAGAAGAAACGAGCCTATGCAGATATCGTCGATGAAGATGAGCCAACTAGGGATGATGTTGGCCGAAAGAATAACACGACGAGTAAGGGACAGGTCGTGGGATGGCCACCTGTGTGTTCTTATCGAAAAAAGAATAGCTTTGGAGAGAAAGAGTCGTTGCTTAAGAATGAGAATTCGAAAATGTACGTGAAGATTAGTATGGATGGAGCTCCATTTCTGCGTAAACTTGACTTGGGTTCTCATGAAGGTTACTCGGATCTTGCTGTTGCTCTCGAGAAGCTCTTTGCTTGCTTTGGAACGGGTAAATTAATTTAAAGCACTATTTTCTTCCTCTTTTATACACTTTTTTTTTACCATTTGTAGAGTAACTTAATAAGTTAATATTGCATGGTAATTAAAAGTTCTTTCATTCTAGAAAAATATATAAATAAGAGTATGGGCAAATTTGTAAAATGACAGGGAAGACATCAAAGCATGGAGAAAGTTCTGATTACGTTCCCATTTATGAGGACAAAGATGGAGATTGGATGCTTGTTGGAGACGTCCCATGGGAGTAAGTTTACTTTTTATCTTTTTAATTTCTAAATTTAATTTTTCTTTTTACTAAAATTAAAATTTCATTTTCTTTAATTTAATAAATTATAATTTTCATTTTCTTTAATTTAATAAATTATGTAGGGTAAAATTTTAAATCAATAACTTACCATCGATGTTCCCGGTCAATAACGTGTGTCTAAACCACTCTCATGTTCCCGGTCGTAAATTAAAAATGTCCATTTAACCCATAAATAAGGATTATATTTTCTACCCCGCCTCAATCCTACTCAAATCTTTGCGTTGTCATCCCTAGTTTTTTAGGGTTGAATATGTTAAACATCGAAGATATTAATCCATTAAATACTCTTTAAAATAAATATATTTTTTAAAAAATTAATATATAAAAAAAAAATTGTGGACGTAGAGATTGAATAAAGGATGGGGAAAAGAACAGGAAAGCTTCTCCATCCCCGCTCCGGTAGAAGGAATATATATATATATATGTTAAATTACCGTTGATTAACGGTGCTTTAAATTGAAGTCTTCCGTCAAAGTCAATTTGATTTGATTGATAAAATCGCTATTAATCTTCAACACTTCATTTATGAAGAGAGGTAGGGGATGGGCAAAATGGTCTTTTCAAATCTCCCATTCCATTCATTAACGCGCACAACATGATACCGACACGAACCAAACCTTAATAATAATGTCAGCCAGATTACAAAGTTGTCCCTCACTGCATTTCTCCTTGCCCCCTGCCCGACACATCCCATTTATTTAAAATCATAATAATCCAATTTTATATTTGAAAAGAATTATTCCCTAATTAAATTTGTTATTATAATTTTAAAAAAAATTAATAATATTATTAATTTTTCAGGATGTTTATGGAATCGTGCAAGAGGCTAAGGATAATGAAGAGATCCGAGGCCAAAGGGTTCGGCCTGCAATTTAAAGATCTATGAGCATTGAGCAGAAGAAAATGGAAAGAAGAGGAAGATGTCCTCTAATAATGAAGGCATAGTTTCGTTAATTTTTATATTTTTAATCTTTTGGTTAATTGTTATGACTTTATTTTGTTTGAAAATAGACATAAAAGTTGCAACTTGTGAATATTTGTTATTTAAAAGTGATGTGATTTTAATTATTAATTTCTAATTTTTTTTTTCTTAGTTCATATAAAACTAATATTAGCCAATTATCCAAACAAAT

mRNA sequence

ATGCCGGTCCTTAACGGTGTCTTAGGGAGCATCAAGACCCCACCTTTGTTCCTCGTCTCCTTAGTTGACCTGTCATTGTTTCCCACTTCCTTCTTCTATATATCCCTTTTCCCTTTTCATTTTCCCATTCTAAACACAAAAAAAAAACACCCATTCTTCCATCAAATGGCAAACGAATCCCTCGGGCTCGAGATCACCGAGCTTCGCCTAGGTCTCCCTGGCAACAACGACAAAAACGAGAAGAAACGAGCCTATGCAGATATCGTCGATGAAGATGAGCCAACTAGGGATGATGTTGGCCGAAAGAATAACACGACGAGTAAGGGACAGGTCGTGGGATGGCCACCTGTGTGTTCTTATCGAAAAAAGAATAGCTTTGGAGAGAAAGAGTCGTTGCTTAAGAATGAGAATTCGAAAATGTACGTGAAGATTAGTATGGATGGAGCTCCATTTCTGCGTAAACTTGACTTGGGTTCTCATGAAGGTTACTCGGATCTTGCTGTTGCTCTCGAGAAGCTCTTTGCTTGCTTTGGAACGGGGAAGACATCAAAGCATGGAGAAAGTTCTGATTACGTTCCCATTTATGAGGACAAAGATGGAGATTGGATGCTTGTTGGAGACGTCCCATGGGAGATGTTTATGGAATCGTGCAAGAGGCTAAGGATAATGAAGAGATCCGAGGCCAAAGGGTTCGGCCTGCAATTTAAAGATCTATGAGCATTGAGCAGAAGAAAATGGAAAGAAGAGGAAGATGTCCTCTAATAATGAAGGCATAGTTTCGTTAATTTTTATATTTTTAATCTTTTGGTTAATTGTTATGACTTTATTTTGTTTGAAAATAGACATAAAAGTTGCAACTTGTGAATATTTGTTATTTAAAAGTGATGTGATTTTAATTATTAATTTCTAATTTTTTTTTTCTTAGTTCATATAAAACTAATATTAGCCAATTATCCAAACAAAT

Coding sequence (CDS)

ATGCCGGTCCTTAACGGTGTCTTAGGGAGCATCAAGACCCCACCTTTGTTCCTCGTCTCCTTAGTTGACCTGTCATTGTTTCCCACTTCCTTCTTCTATATATCCCTTTTCCCTTTTCATTTTCCCATTCTAAACACAAAAAAAAAACACCCATTCTTCCATCAAATGGCAAACGAATCCCTCGGGCTCGAGATCACCGAGCTTCGCCTAGGTCTCCCTGGCAACAACGACAAAAACGAGAAGAAACGAGCCTATGCAGATATCGTCGATGAAGATGAGCCAACTAGGGATGATGTTGGCCGAAAGAATAACACGACGAGTAAGGGACAGGTCGTGGGATGGCCACCTGTGTGTTCTTATCGAAAAAAGAATAGCTTTGGAGAGAAAGAGTCGTTGCTTAAGAATGAGAATTCGAAAATGTACGTGAAGATTAGTATGGATGGAGCTCCATTTCTGCGTAAACTTGACTTGGGTTCTCATGAAGGTTACTCGGATCTTGCTGTTGCTCTCGAGAAGCTCTTTGCTTGCTTTGGAACGGGGAAGACATCAAAGCATGGAGAAAGTTCTGATTACGTTCCCATTTATGAGGACAAAGATGGAGATTGGATGCTTGTTGGAGACGTCCCATGGGAGATGTTTATGGAATCGTGCAAGAGGCTAAGGATAATGAAGAGATCCGAGGCCAAAGGGTTCGGCCTGCAATTTAAAGATCTATGA

Protein sequence

MPVLNGVLGSIKTPPLFLVSLVDLSLFPTSFFYISLFPFHFPILNTKKKHPFFHQMANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQFKDL

Homology

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BLAST of Carg09552 vs. NCBI nr
Match: KAG7014105.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 488.4 bits (1256), Expect = 3.5e-134
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MPVLNGVLGSIKTPPLFLVSLVDLSLFPTSFFYISLFPFHFPILNTKKKHPFFHQMANES 60
           MPVLNGVLGSIKTPPLFLVSLVDLSLFPTSFFYISLFPFHFPILNTKKKHPFFHQMANES
Sbjct: 1   MPVLNGVLGSIKTPPLFLVSLVDLSLFPTSFFYISLFPFHFPILNTKKKHPFFHQMANES 60

Query: 61  LGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWPPVCSY 120
           LGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWPPVCSY
Sbjct: 61  LGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWPPVCSY 120

Query: 121 RKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFACFGTG 180
           RKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFACFGTG
Sbjct: 121 RKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFACFGTG 180

Query: 181 KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQFKDL 239
           KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQFKDL
Sbjct: 181 KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQFKDL 238

[Close]

BLAST of Carg09552 vs. NCBI nr
Match: XP_022992376.1 (auxin-induced protein AUX22-like [Cucurbita maxima])

HSP 1 Score: 469.2 bits (1206), Expect = 2.2e-128
Identity = 227/238 (95.38%), Postives = 233/238 (97.90%), Query Frame = 0


Query: 1   MPVLNGVLGSIKTPPLFLVSLVDLSLFPTSFFYISLFPFHFPILNTKKKHPFFHQMANES 60
           MPVLNGVLGS KTPPLFLVSLVDLSLFPTS FYISLFPFHFPILN KKKHPFFHQMANES
Sbjct: 1   MPVLNGVLGSTKTPPLFLVSLVDLSLFPTSLFYISLFPFHFPILNKKKKHPFFHQMANES 60

Query: 61  LGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWPPVCSY 120
           LGLEITELRLGLPGNN+KNEKKRAYADI+DEDEPTRD VGRKNNTTSKGQVVGWPPVCSY
Sbjct: 61  LGLEITELRLGLPGNNNKNEKKRAYADIIDEDEPTRDSVGRKNNTTSKGQVVGWPPVCSY 120

Query: 121 RKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFACFGTG 180
           RKKNSFGEKESLLK+EN KMYVKISMDGAPFLRKLDLGSH+GYSDLA+ALEKLFACFGTG
Sbjct: 121 RKKNSFGEKESLLKSENLKMYVKISMDGAPFLRKLDLGSHQGYSDLALALEKLFACFGTG 180

Query: 181 KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQFKDL 239
           KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRSEAKGFGLQFKDL
Sbjct: 181 KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQFKDL 238

[Close]

BLAST of Carg09552 vs. NCBI nr
Match: XP_023549188.1 (LOW QUALITY PROTEIN: auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 463.4 bits (1191), Expect = 1.2e-126
Identity = 227/238 (95.38%), Postives = 229/238 (96.22%), Query Frame = 0


Query: 1   MPVLNGVLGSIKTPPLFLVSLVDLSLFPTSFFYISLFPFHFPILNTKKKHPFFHQMANES 60
           MPVLNGVLGSIKTPPLFLVSLVDLSLF TS FYISLFPFHFPI    KKHPFFHQMANES
Sbjct: 1   MPVLNGVLGSIKTPPLFLVSLVDLSLFTTSLFYISLFPFHFPIXKHTKKHPFFHQMANES 60

Query: 61  LGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWPPVCSY 120
           LGLEITELRLGLPGNNDKNEKKRAYADIVDEDEP+R D  RKNNTTSKGQVVGWPPVCSY
Sbjct: 61  LGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPSRVDASRKNNTTSKGQVVGWPPVCSY 120

Query: 121 RKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFACFGTG 180
           RKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFACFGTG
Sbjct: 121 RKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFACFGTG 180

Query: 181 KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQFKDL 239
           KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRSEAKGFGLQFKDL
Sbjct: 181 KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQFKDL 238

[Close]

BLAST of Carg09552 vs. NCBI nr
Match: KAG6575564.1 (Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377.9 bits (969), Expect = 6.6e-101
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 56  MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 115
           MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP
Sbjct: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 60

Query: 116 PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 175
           PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA
Sbjct: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 120

Query: 176 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 235
           CFGTGKTSKHGESS+YVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF
Sbjct: 121 CFGTGKTSKHGESSNYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 180

Query: 236 KDL 239
           KDL
Sbjct: 181 KDL 183

[Close]

BLAST of Carg09552 vs. NCBI nr
Match: XP_022954061.1 (auxin-induced protein AUX22 [Cucurbita moschata])

HSP 1 Score: 374.0 bits (959), Expect = 9.5e-100
Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 56  MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 115
           MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDV RKNNTTSKGQVVGWP
Sbjct: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVDRKNNTTSKGQVVGWP 60

Query: 116 PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 175
           PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLF 
Sbjct: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFG 120

Query: 176 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 235
           CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRSEAKGFGLQF
Sbjct: 121 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQF 180

Query: 236 KDL 239
           KDL
Sbjct: 181 KDL 183

[Close]

BLAST of Carg09552 vs. ExPASy Swiss-Prot
Match: P13088 (Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.9e-63
Identity = 125/190 (65.79%), Postives = 145/190 (76.32%), Query Frame = 0


Query: 56  MANESLGLEITELRLGLPGN-------NDKNEKKRAYADIVD--EDEPTRDDVGRKNNTT 115
           MA E LGLEITELRLGLP         N KNEKKRA+++I D   DE +    G +   T
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMET 60

Query: 116 SKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDL 175
           +K QVVGWPPVCSYRKKNS  E         SKMYVK+SMDGAPFLRK+DLG H+GYSDL
Sbjct: 61  NKSQVVGWPPVCSYRKKNSMNEGA-------SKMYVKVSMDGAPFLRKIDLGLHKGYSDL 120

Query: 176 AVALEKLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRS 235
           A+AL+KLF C+G  +  K+ ++S++VPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMK+S
Sbjct: 121 ALALDKLFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKS 180

Query: 236 EAKGFGLQFK 237
           +AKGFGLQ K
Sbjct: 181 DAKGFGLQPK 183

[Close]

BLAST of Carg09552 vs. ExPASy Swiss-Prot
Match: P32293 (Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.2e-60
Identity = 121/190 (63.68%), Postives = 139/190 (73.16%), Query Frame = 0


Query: 56  MANESLGLEITELRLGLP--------GNNDKNEKKRAYADIVD-EDEPTRDDVGRKNNTT 115
           MA E LGLEITELRLGLP          N + + KR +++I D  DE +    G      
Sbjct: 1   MAKEGLGLEITELRLGLPDAEHVAVANKNGEKKNKRVFSEIDDVGDENSSSGGGGDRKME 60

Query: 116 SKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDL 175
           +K QVVGWPPVCSYRKKNS         NE SKMYVK+SMDGAPFLRK+DLG H+GYSDL
Sbjct: 61  NKNQVVGWPPVCSYRKKNSV--------NEASKMYVKVSMDGAPFLRKMDLGMHKGYSDL 120

Query: 176 AVALEKLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRS 235
           A ALEKLF C+G  +  K+ E+ ++VPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKR+
Sbjct: 121 AFALEKLFGCYGMVEALKNVENGEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRA 180

Query: 236 EAKGFGLQFK 237
           +AKGFGLQ K
Sbjct: 181 DAKGFGLQPK 182

[Close]

BLAST of Carg09552 vs. ExPASy Swiss-Prot
Match: O24541 (Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.5e-58
Identity = 117/189 (61.90%), Postives = 139/189 (73.54%), Query Frame = 0


Query: 56  MANESLGLEITELRLGLPG-------NNDKNE-KKRAYADIVDEDEPTRDDVGRKNNTTS 115
           M  E LGLEITELRLGLPG       + DKN+ KKR ++DI  E+  + +D G+K    +
Sbjct: 1   MEKEDLGLEITELRLGLPGAGGENNTDKDKNKNKKRVFSDIEGENSSSEED-GKKE---T 60

Query: 116 KGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLA 175
           K QVVGWPPVCSYRKKN+  E          K+YVK+SMDGAPFLRK+DL  H+GYSDLA
Sbjct: 61  KNQVVGWPPVCSYRKKNTVNE---------PKLYVKVSMDGAPFLRKIDLAMHKGYSDLA 120

Query: 176 VALEKLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSE 235
            AL+K F C+G  +  K  E++++VPIYEDKDGDWMLVGDVPWEMF ESCKRLRIMKRS+
Sbjct: 121 FALDKFFGCYGICEALKDAENAEHVPIYEDKDGDWMLVGDVPWEMFRESCKRLRIMKRSD 176

Query: 236 AKGFGLQFK 237
           AKGF LQ K
Sbjct: 181 AKGFDLQPK 176

[Close]

BLAST of Carg09552 vs. ExPASy Swiss-Prot
Match: P49680 (Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-56
Identity = 115/182 (63.19%), Postives = 133/182 (73.08%), Query Frame = 0


Query: 56  MANESLGLEITELRLGLP-GNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGW 115
           MA E LGLEITELRLGL  G   KNEKKR +++I D         G + +   K QVVGW
Sbjct: 1   MAREGLGLEITELRLGLSCGEPKKNEKKRMFSEI-DGGVEENGGSGDRKSVDKKNQVVGW 60

Query: 116 PPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLF 175
           PPVCSYRKKN          NE SKMY+K+SMDGAP+LRK+DL  H+GY +LA+ALEKLF
Sbjct: 61  PPVCSYRKKN---------MNEGSKMYMKVSMDGAPYLRKIDLCLHKGYLELALALEKLF 120

Query: 176 ACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQ 235
            C G  +  K  E+ ++VPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRS+AKGF LQ
Sbjct: 121 DCCGIEEALKDAENCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFDLQ 172

Query: 236 FK 237
            K
Sbjct: 181 PK 172

[Close]

BLAST of Carg09552 vs. ExPASy Swiss-Prot
Match: O24409 (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=2)

HSP 1 Score: 202.2 bits (513), Expect = 6.5e-51
Identity = 110/194 (56.70%), Postives = 133/194 (68.56%), Query Frame = 0


Query: 56  MANESLGLEITELRLGLPGNN--DKNEKKRAYADI--------VDEDE----PTRDDVGR 115
           M  E LGLEITELRLGLPG +  +K  KKRA+ ++         D+ E     +  D  +
Sbjct: 1   MEKEGLGLEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEK 60

Query: 116 KNNT-TSKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSH 175
            N++  +K QVVGWPPVCSYRKKNS  E  +    +    YVK+SMDG P+LRK+DLGS 
Sbjct: 61  VNDSPAAKSQVVGWPPVCSYRKKNSCKEAST---TKVGLGYVKVSMDGVPYLRKMDLGSS 120

Query: 176 EGYSDLAVALEKLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRL 235
           +GY DLA AL+KLF   G G   K G++ +YV IYEDKDGDWML GDVPW MF+ESCKRL
Sbjct: 121 QGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRL 180

[Close]

BLAST of Carg09552 vs. ExPASy TrEMBL
Match: A0A6J1JTD7 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488703 PE=3 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.1e-128
Identity = 227/238 (95.38%), Postives = 233/238 (97.90%), Query Frame = 0


Query: 1   MPVLNGVLGSIKTPPLFLVSLVDLSLFPTSFFYISLFPFHFPILNTKKKHPFFHQMANES 60
           MPVLNGVLGS KTPPLFLVSLVDLSLFPTS FYISLFPFHFPILN KKKHPFFHQMANES
Sbjct: 1   MPVLNGVLGSTKTPPLFLVSLVDLSLFPTSLFYISLFPFHFPILNKKKKHPFFHQMANES 60

Query: 61  LGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWPPVCSY 120
           LGLEITELRLGLPGNN+KNEKKRAYADI+DEDEPTRD VGRKNNTTSKGQVVGWPPVCSY
Sbjct: 61  LGLEITELRLGLPGNNNKNEKKRAYADIIDEDEPTRDSVGRKNNTTSKGQVVGWPPVCSY 120

Query: 121 RKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFACFGTG 180
           RKKNSFGEKESLLK+EN KMYVKISMDGAPFLRKLDLGSH+GYSDLA+ALEKLFACFGTG
Sbjct: 121 RKKNSFGEKESLLKSENLKMYVKISMDGAPFLRKLDLGSHQGYSDLALALEKLFACFGTG 180

Query: 181 KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQFKDL 239
           KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRSEAKGFGLQFKDL
Sbjct: 181 KTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQFKDL 238

[Close]

BLAST of Carg09552 vs. ExPASy TrEMBL
Match: A0A6J1GPU1 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456436 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.6e-100
Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 56  MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVGWP 115
           MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDV RKNNTTSKGQVVGWP
Sbjct: 1   MANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVDRKNNTTSKGQVVGWP 60

Query: 116 PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 175
           PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLF 
Sbjct: 61  PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFG 120

Query: 176 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGLQF 235
           CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMKRSEAKGFGLQF
Sbjct: 121 CFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSEAKGFGLQF 180

Query: 236 KDL 239
           KDL
Sbjct: 181 KDL 183

[Close]

BLAST of Carg09552 vs. ExPASy TrEMBL
Match: A0A1S3CF19 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499752 PE=3 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 8.7e-99
Identity = 206/261 (78.93%), Postives = 215/261 (82.38%), Query Frame = 0


Query: 1   MPVLNGVLGSIKTPPLFLVS-----LVDLSLFPTSF---FYISL--FPFHFPILNTKKKH 60
           MPVLN VLGS KTPPL L+S     LVDLSLFPT F   FYISL  FPF F   +   KH
Sbjct: 1   MPVLNSVLGSTKTPPLLLISATINPLVDLSLFPTPFLQSFYISLFQFPFPFSFFSHFSKH 60

Query: 61  P--FFHQMANESLGLEITELR--LGLPGNNDKNEKKRAYADIVD-EDEPTR--DDVGRKN 120
           P  FF QMA ESLGL+ITELR  LGLPGN+DKNEKKRAY DIV+   EPTR  DDVGRKN
Sbjct: 61  PVLFFQQMAKESLGLDITELRLGLGLPGNSDKNEKKRAYNDIVNGGHEPTRDGDDVGRKN 120

Query: 121 -NTTSKGQVVGWPPVCSYRKKNSFGEKESLL----KNENSKMYVKISMDGAPFLRKLDLG 180
            N TSKGQVVGWPPVCSYRK+NSFGEKES      +NENSKMYVKISMDGAPFLRKLDLG
Sbjct: 121 SNATSKGQVVGWPPVCSYRKRNSFGEKESSSSLPHENENSKMYVKISMDGAPFLRKLDLG 180

Query: 181 SHEGYSDLAVALEKLFACFG-TGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESC 239
           SH+ YSDLAVALEKLF CFG TGKT KHGES DYVPIYEDKDGDWMLVGDVPWEMF+ESC
Sbjct: 181 SHKDYSDLAVALEKLFGCFGSTGKTLKHGESCDYVPIYEDKDGDWMLVGDVPWEMFIESC 240

[Close]

BLAST of Carg09552 vs. ExPASy TrEMBL
Match: A0A6J1L0Q4 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498041 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.2e-92
Identity = 182/245 (74.29%), Postives = 197/245 (80.41%), Query Frame = 0


Query: 1   MPVLNGVLGSIKTPPLFLVS-----LVDLSLFPT--SFFYISLFPFHFPILNTKKKHPFF 60
           +PVL  VLG  KTP L L+S     LVDLS FPT  S   I+    + P+  +       
Sbjct: 16  LPVLKSVLGDTKTPHLLLISETTKPLVDLSWFPTPSSISPITFLLLYIPLSFSPSLTTHL 75

Query: 61  HQMANESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSKGQVVG 120
             M  E LGLEITELRLGLPGN +KNEKKRAY  IV EDEPTRD+V RKNN  SKGQVVG
Sbjct: 76  SSMEKEPLGLEITELRLGLPGNGEKNEKKRAYVAIVGEDEPTRDNVERKNN-MSKGQVVG 135

Query: 121 WPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKL 180
           WPPVCSYR+KNSF EKESL +N+NSK+YVKISMDGAPFLRKLDLGSH GYSDLA+ALEKL
Sbjct: 136 WPPVCSYRRKNSFEEKESLHENKNSKIYVKISMDGAPFLRKLDLGSHNGYSDLALALEKL 195

Query: 181 FACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFGL 239
           FACFGTGKTSKHG+ SDYVPIYEDKDGDWMLVGDVPWEMF +SCKRLRIMKRSEAKGFGL
Sbjct: 196 FACFGTGKTSKHGKGSDYVPIYEDKDGDWMLVGDVPWEMFAKSCKRLRIMKRSEAKGFGL 255

[Close]

BLAST of Carg09552 vs. ExPASy TrEMBL
Match: A0A0A0KC02 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G440550 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.6e-84
Identity = 166/194 (85.57%), Postives = 176/194 (90.72%), Query Frame = 0


Query: 56  MANESLGLEITELR--LGLPGNNDKNEKKRAYADIVDED-EPTRDD----VGRKN-NTTS 115
           MA ESLG EITELR  LGLPGN++KNEKKRA+ DIV+ D EPTRD+    VGRKN NTTS
Sbjct: 1   MAKESLGFEITELRLGLGLPGNSNKNEKKRAFDDIVNGDHEPTRDNDDNRVGRKNSNTTS 60

Query: 116 KGQVVGWPPVCSYRKKNSFGEKES---LLKNENSKMYVKISMDGAPFLRKLDLGSHEGYS 175
           KGQVVGWPPVCSYRK+NSFGEKES   L +NENSKMYVKISMDGAPFLRKLDLGSH+GYS
Sbjct: 61  KGQVVGWPPVCSYRKRNSFGEKESSSLLHENENSKMYVKISMDGAPFLRKLDLGSHKGYS 120

Query: 176 DLAVALEKLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMK 235
           DLA+ALEKLFACFGTGKT KHGES DYVPIYEDKDGDWMLVGDVPWEMF+ESCKRLRIMK
Sbjct: 121 DLALALEKLFACFGTGKTLKHGESCDYVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMK 180

Query: 236 RSEAKGFGLQFKDL 239
           RSEAKGFGLQFKDL
Sbjct: 181 RSEAKGFGLQFKDL 194

[Close]

BLAST of Carg09552 vs. TAIR 10
Match: AT3G15540.1 (indole-3-acetic acid inducible 19 )

HSP 1 Score: 202.2 bits (513), Expect = 4.6e-52
Identity = 110/194 (56.70%), Postives = 133/194 (68.56%), Query Frame = 0


Query: 56  MANESLGLEITELRLGLPGNN--DKNEKKRAYADI--------VDEDE----PTRDDVGR 115
           M  E LGLEITELRLGLPG +  +K  KKRA+ ++         D+ E     +  D  +
Sbjct: 1   MEKEGLGLEITELRLGLPGRDVAEKMMKKRAFTEMNMTSSGSNSDQCESGVVSSGGDAEK 60

Query: 116 KNNT-TSKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSH 175
            N++  +K QVVGWPPVCSYRKKNS  E  +    +    YVK+SMDG P+LRK+DLGS 
Sbjct: 61  VNDSPAAKSQVVGWPPVCSYRKKNSCKEAST---TKVGLGYVKVSMDGVPYLRKMDLGSS 120

Query: 176 EGYSDLAVALEKLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRL 235
           +GY DLA AL+KLF   G G   K G++ +YV IYEDKDGDWML GDVPW MF+ESCKRL
Sbjct: 121 QGYDDLAFALDKLFGFRGIGVALKDGDNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRL 180

[Close]

BLAST of Carg09552 vs. TAIR 10
Match: AT1G52830.1 (indole-3-acetic acid 6 )

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-47
Identity = 97/194 (50.00%), Postives = 121/194 (62.37%), Query Frame = 0


Query: 56  MANESLGLEITELRLGLPGNN--------DKNEKKRAYADIV-------DEDEPTRDDVG 115
           MA E L LEITELRLGLPG+N           +KKR  +D++       + +      V 
Sbjct: 1   MAKEGLALEITELRLGLPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVE 60

Query: 116 RKNNTTSKGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSH 175
            ++    K Q VGWPPVCSYR+K +  E    +       YVK+SMDG P++RK+DLGS 
Sbjct: 61  DESLPVVKSQAVGWPPVCSYRRKKNNEEASKAIG------YVKVSMDGVPYMRKIDLGSS 120

Query: 176 EGYSDLAVALEKLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRL 235
             Y +L   LE LF C G G  +K G+  +Y+ IYEDKD DWMLVGDVPW+MF ESCKRL
Sbjct: 121 NSYINLVTVLENLFGCLGIG-VAKEGKKCEYIIIYEDKDRDWMLVGDVPWQMFKESCKRL 180

[Close]

BLAST of Carg09552 vs. TAIR 10
Match: AT1G15580.1 (indole-3-acetic acid inducible 5 )

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-42
Identity = 97/182 (53.30%), Postives = 117/182 (64.29%), Query Frame = 0


Query: 56  MANES--LGLEITELRLGLPGN-----NDKNEKKRAYADIVDEDEPTRDDVGRKNNTTSK 115
           MANES  LGLEITELRLGLPG+        + KKRA  ++         ++  K     K
Sbjct: 1   MANESNNLGLEITELRLGLPGDIVVSGESISGKKRASPEV---------EIDLKCEPAKK 60

Query: 116 GQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAV 175
            QVVGWPPVCSYR+KNS    +S         YVK+S+DGA FLRK+DL  ++ Y DLA 
Sbjct: 61  SQVVGWPPVCSYRRKNSLERTKS--------SYVKVSVDGAAFLRKIDLEMYKCYQDLAS 120

Query: 176 ALEKLFACFGTGKTSKHGESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEA 231
           AL+ LF C+     +   + S+ VPIYEDKDGDWML GDVPWEMF+ SCKRLRIMKRS  
Sbjct: 121 ALQILFGCYINFDDTL--KESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRSCN 163

[Close]

BLAST of Carg09552 vs. TAIR 10
Match: AT1G04240.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-41
Identity = 92/187 (49.20%), Postives = 123/187 (65.78%), Query Frame = 0


Query: 58  NESLGLEITELRLGLPGNNDKNEKKRAYA--------DIVDEDEPTRDDVGRKNNTT--S 117
           +E + L+ TELRLGLPG ++  E K   +         +  + E   +   RK  T+   
Sbjct: 2   DEFVNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPR 61

Query: 118 KGQVVGWPPVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLA 177
           K Q+VGWPPV SYR KN+   K++  ++E   +YVK+SMDGAP+LRK+DL  ++GYS+L 
Sbjct: 62  KAQIVGWPPVRSYR-KNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELL 121

Query: 178 VALEKLFACFGTGKTSKHG--ESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKR 233
            ALE +F  F  G+  +    + SD+VP YEDKDGDWML+GDVPWEMF+ +CKRLRIMK 
Sbjct: 122 KALEVMFK-FSVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKG 181

[Close]

BLAST of Carg09552 vs. TAIR 10
Match: AT5G43700.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 89/179 (49.72%), Postives = 115/179 (64.25%), Query Frame = 0


Query: 58  NESLGLEITELRLGLPGNNDKNEKKRAYADIVDEDEPTRDDVGRKNNTTS--KGQVVGWP 117
           +E + L+ TELRLGLPG  +     ++   ++ E      +   K  T S  K Q+VGWP
Sbjct: 8   DELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWP 67

Query: 118 PVCSYRKKNSFGEKESLLKNENSKMYVKISMDGAPFLRKLDLGSHEGYSDLAVALEKLFA 177
           PV SYRK N   +K    ++E    YVK+SMDGAP+LRK+DL  ++ Y +L  +LE +F 
Sbjct: 68  PVRSYRKNNVQTKKS---ESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK 127

Query: 178 CFGTGK-TSKHG-ESSDYVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSEAKGFG 233
            F  G+   + G + SD+VP YEDKDGDWMLVGDVPWEMF+ SCKRLRIMK SE KG G
Sbjct: 128 -FSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLG 182

The following BLAST results are available for this feature:

BLAST of Carg09552 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014105.1	3.5e-134	100.00	Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022992376.1	2.2e-128	95.38	auxin-induced protein AUX22-like [Cucurbita maxima]	[more]
XP_023549188.1	1.2e-126	95.38	LOW QUALITY PROTEIN: auxin-induced protein AUX22-like [Cucurbita pepo subsp. pep...	[more]
KAG6575564.1	6.6e-101	99.45	Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022954061.1	9.5e-100	98.36	auxin-induced protein AUX22 [Cucurbita moschata]	[more]

BLAST of Carg09552 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13088	1.9e-63	65.79	Auxin-induced protein AUX22 OS=Glycine max OX=3847 GN=AUX22 PE=2 SV=1	[more]
P32293	1.2e-60	63.68	Auxin-induced protein 22A OS=Vigna radiata var. radiata OX=3916 GN=AUX22A PE=2 S...	[more]
O24541	5.5e-58	61.90	Auxin-induced protein 22C OS=Vigna radiata var. radiata OX=3916 GN=AUX22C PE=2 S...	[more]
P49680	1.4e-56	63.19	Auxin-induced protein IAA6 OS=Pisum sativum OX=3888 GN=IAA6 PE=2 SV=1	[more]
O24409	6.5e-51	56.70	Auxin-responsive protein IAA19 OS=Arabidopsis thaliana OX=3702 GN=IAA19 PE=1 SV=...	[more]

BLAST of Carg09552 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTD7	1.1e-128	95.38	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111488703 PE=3 SV=1	[more]
A0A6J1GPU1	4.6e-100	98.36	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111456436 PE=3 SV=1	[more]
A0A1S3CF19	8.7e-99	78.93	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103499752 PE=3 SV=1	[more]
A0A6J1L0Q4	1.2e-92	74.29	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111498041 PE=3 SV=1	[more]
A0A0A0KC02	1.6e-84	85.57	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_7G440550 PE=3 SV=1	[more]

BLAST of Carg09552 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15540.1	4.6e-52	56.70	indole-3-acetic acid inducible 19	[more]
AT1G52830.1	4.5e-47	50.00	indole-3-acetic acid 6	[more]
AT1G15580.1	1.9e-42	53.30	indole-3-acetic acid inducible 5	[more]
AT1G04240.1	1.6e-41	49.20	AUX/IAA transcriptional regulator family protein	[more]
AT5G43700.1	1.2e-39	49.72	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 134..236 e-value: 1.3E-39 score: 136.3
None	No IPR available	PANTHER	PTHR31734:SF87	AUXIN-RESPONSIVE PROTEIN IAA6	coord: 59..231
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 135..224
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 97..231 e-value: 4.3E-51 score: 174.1
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 59..231
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 139..227 score: 24.791765

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09552-RA	Carg09552-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding