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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCCCTTTGTATGCTACCAATAATTGCAGCAAGTCACGAGATGTCGTCCACCGTCGTCGGTACCGAACGCATGATGGTTTCACACACAATGTATTGAAGTTCAAGTGGTAAGTTGCTGAAAGAAACAGAGAGGAGGTATGATTGTGTGAAGCTTGCCATGTATAATCAGTAGCTCCCCTAGGTTTTTGTTTGTCCAGTTCTTCCATGCAAGAGTCCTTTGTTCAAGCAATACATCCATTATTTTGTATGGATCATTCTTGATCATGATTTTTTTTTTCTTTCCCAATTATATAATTATTAAATTCAAAAATTTAGAACATCCATCGAACGACTTGCATATAGCGTAACAAAATTGATGATATAAAACTTTTGAGAATTCGAATTAACGATCTTGGTGAAGAACAAGACTTTTAGATCTAAAAACTAAAGATTCGTAAGTAATCTATGGTTAATAATCACGGGTTAAATTATAACCTAAAATCTTAAAAATAATATTTTAAAATTAAAAATAATAATAAAACCTTCTTAAATTCAAACACGGGTCTGTTTTTATTTTTTATTTTTAATTATTAAATTTTTTAAAACTTTTGATTATGATTATGTTTAAAATAAAATATTAAAATTTATATATCTTCCAATTTAATAACATAATTCAAAACATTTTAACATATGCTTTTTCCATTATTTTAAAAAATTACTCCCAAAATTTAAAAAAGTTAATATTTTTGTGTAATTATTAAAAAAATTTAACTCTCGAAATTAAAAATAAAAATAAATAATATATTATATATATTGTCAAATTACTAAAATGTGGGGACCACGACTGTGATTTAAACTAATAATCAATATATAATACCATTTTAATTATGGAAGTAATGGAAACTACGATTTTACATTACAACTGTAGCGCATCTGGACGAAAGAATTTTCATCACAAGCGGCACGGACACGACCGAGCTATCAGAAGAAGAGAAGGGTGAAGAAACTTTGTCCGGAATCCTGAATTTTGCTGCCGGGTGTTTCAATTTGTCTCATCTCGATCTCAAGATTGATGCCTTTATGTTTCAGACTTGA mRNA sequence ATGGCCCTTTGTATGCTACCAATAATTGCAGCAAGTCACGAGATGTCGTCCACCGTCGTCGCGCATCTGGACGAAAGAATTTTCATCACAAGCGGCACGGACACGACCGAGCTATCAGAAGAAGAGAAGGGTGAAGAAACTTTGTCCGGAATCCTGAATTTTGCTGCCGGGTGTTTCAATTTGTCTCATCTCGATCTCAAGATTGATGCCTTTATGTTTCAGACTTGA Coding sequence (CDS) ATGGCCCTTTGTATGCTACCAATAATTGCAGCAAGTCACGAGATGTCGTCCACCGTCGTCGCGCATCTGGACGAAAGAATTTTCATCACAAGCGGCACGGACACGACCGAGCTATCAGAAGAAGAGAAGGGTGAAGAAACTTTGTCCGGAATCCTGAATTTTGCTGCCGGGTGTTTCAATTTGTCTCATCTCGATCTCAAGATTGATGCCTTTATGTTTCAGACTTGA Protein sequence MALCMLPIIAASHEMSSTVVAHLDERIFITSGTDTTELSEEEKGEETLSGILNFAAGCFNLSHLDLKIDAFMFQT
Homology
BLAST of Carg09540 vs. NCBI nr
Match: KAG7014093.1 (hypothetical protein SDJN02_24266, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.1 bits (370), Expect = 6.0e-32 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query: 1 MALCMLPIIAASHEMSSTVVAHLDERIFITSGTDTTELSEEEKGEETLSGILNFAAGCFN 60
MALCMLPIIAASHEMSSTVVAHLDERIFITSGTDTTELSEEEKGEETLSGILNFAAGCFN
Sbjct: 1 MALCMLPIIAASHEMSSTVVAHLDERIFITSGTDTTELSEEEKGEETLSGILNFAAGCFN 60
Query: 61 LSHLDLKIDAFMFQT 76
LSHLDLKIDAFMFQT
Sbjct: 61 LSHLDLKIDAFMFQT 75
BLAST of Carg09540 vs. NCBI nr
Match: KAG6575548.1 (Protein SYS1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query: 1 MALCMLPIIAASHEMSSTVVAHLDERIFITSGTDTTELSEEEKGEETLSGILNFAAG 58
MALCMLPIIAASHEMSSTVVAHLDERIFITSGTDTTELSEEEKGEETLSGILNFAAG
Sbjct: 1 MALCMLPIIAASHEMSSTVVAHLDERIFITSGTDTTELSEEEKGEETLSGILNFAAG 57
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG7014093.1 | 6.0e-32 | 100.00 | hypothetical protein SDJN02_24266, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6575548.1 | 1.4e-20 | 100.00 | Protein SYS1-like protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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